From bc53823914fe967fae6dfb5e7f2ae0cb7a8d8f19 Mon Sep 17 00:00:00 2001 From: Guangchuang Yu Date: Fri, 26 Jul 2024 17:13:21 +0800 Subject: [PATCH] yulab-msg --- DESCRIPTION | 4 ++-- NEWS.md | 3 ++- R/zzz.R | 10 ---------- 3 files changed, 4 insertions(+), 13 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index d775edd..4966856 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: clusterProfiler Type: Package Title: A universal enrichment tool for interpreting omics data -Version: 4.13.0.001 +Version: 4.13.0.002 Authors@R: c( person(given = "Guangchuang", family = "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")), person(given = "Li-Gen", family = "Wang", email = "reeganwang020@gmail.com", role = "ctb"), @@ -33,7 +33,7 @@ Imports: stats, tidyr, utils, - yulab.utils (>= 0.0.7) + yulab.utils (>= 0.1.5) Suggests: AnnotationHub, knitr, diff --git a/NEWS.md b/NEWS.md index d1d5d3b..77f600e 100644 --- a/NEWS.md +++ b/NEWS.md @@ -12,8 +12,9 @@ TODO: - e.g. independent test for different omics data and then combine results --> -# clusterProfiler 4.13.0.001 +# clusterProfiler 4.13.0.002 ++ use `yulab.utils::yulab_msg()` for startup message (2024-07-26, Fri) + update `kegg_category` information (7 categories and 572 subcategories) (2024-07-26, Fri) - Cellular Processes (36) - Drug Development (75) diff --git a/R/zzz.R b/R/zzz.R index 59d2462..441222b 100644 --- a/R/zzz.R +++ b/R/zzz.R @@ -19,16 +19,6 @@ # Define a cache directory options(clusterProfiler_cache_dir = tempdir()) - - # citation <- paste0("If you use ", pkgname, " in published research, please cite:\n", - # "T Wu, E Hu, S Xu, M Chen, P Guo, Z Dai, T Feng, L Zhou, ", - # "W Tang, L Zhan, X Fu, S Liu, X Bo, and G Yu. ", - # "clusterProfiler 4.0: A universal enrichment tool for interpreting omics data. ", - # "The Innovation. 2021, 2(3):100141") - - - # packageStartupMessage(paste0(msg, citation)) - packageStartupMessage(yulab.utils::yulab_msg(pkgname)) }