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<!-- saved from url=(0055)http://www.mimg.ucla.edu/faculty/xing/surviv/index.html -->
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<div class="WordSection1">
<h3><span style="mso-fareast-font-family:"Times New Roman"">Source code and instructions related to the SURVIV manuscript:<o:p></o:p></span></h3>
<ul type="disc">
<li class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;
mso-list:l1 level1 lfo3;tab-stops:list .5in">
Shihao Shen<sup>1</sup>, Ying Nian Wu<sup>2</sup> and Yi Xing<sup>1,3</sup>
<br>
<b> SURVIV: Survival Analysis of mRNA Isoform Variation<br>
</b>
<i>In press, Nature Communications</i>
<o:p></o:p></li>
</ul>
<p class="MsoNormal">
<span style="mso-fareast-font-family:"Times New Roman"">
<br>
<sup>1</sup>Department of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA.<br>
<sup>2</sup>Department of Statistics, University of California, Los Angeles, Los Angeles, CA 90095, USA.<br>
<sup>3</sup>Corresponding author:<o:p></o:p></span></p>
<p></p>
<br>
Yi Xing<br>
Department of Microbiology, Immunology and Molecular Genetics<br>
University of California, Los Angeles<br>
Los Angeles, CA 90095-7278<br>
Phone: 310-825-6806<br>
Fax: 310-206-3663<br>
Email: <a href="mailto:[email protected]">[email protected]</a><br>
<div class="MsoNormal" align="center" style="text-align:center"><span style="mso-fareast-font-family:"Times New Roman"">
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<b>Source code, example input files and tutorial for SURVIV package</b>
</p>
</span></div>
<span style="font-size:12.0pt;font-family:"Times New Roman","serif";mso-fareast-font-family:
"Times New Roman";mso-ansi-language:EN-US;mso-fareast-language:EN-US;
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<ul type="disc">
<li>
<a href="https://github.com/Xinglab/SURVIV/raw/gh-pages/surviv.py"><b>Source code of the SURVIV package.</b> </a>
</li>
<li>
<a href="https://github.com/Xinglab/SURVIV/raw/gh-pages/surv.txt"><b>Example input file for survival time.</b> </a>
</li>
<li>
<a href="https://github.com/Xinglab/SURVIV/raw/gh-pages/inc.txt"><b>Example input file for RNA-seq read counts.</b> </a>
</li>
<li>
<a href="https://github.com/Xinglab/SURVIV/raw/gh-pages/Tutorial_for_SURVIV.pdf"><b>Tutorial on how to use the SURVIV package (PDF).</b> </a>
</li>
</ul>
</span>
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<p align="left">
(updated on Mar 15, 2016.)
</p>
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