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eda compute: Failed to test if object.... #36

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aurreco-uga opened this issue May 13, 2024 · 6 comments
Open

eda compute: Failed to test if object.... #36

aurreco-uga opened this issue May 13, 2024 · 6 comments

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@aurreco-uga
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2024-05-09 23:34:47.480 [rid:4Xkb9][jid:][p:] DEBUG BucketObjectContainer:35 - Attempting to test whether Bucket{ name='eda-compute-prod' } contains object '13595e3a536e5d5695652dea7a31b096/.workspace'
2024-05-09 23:34:47.539 [rid:4Xkb9][jid:][p:] ERROR ErrorMapper:68 - Caught Exception:
 org.veupathdb.lib.s3.workspaces.WorkspaceAlreadyExistsError: Could not create a workspace for 13595e3a536e5d5695652dea7a31b096 as a workspace already exists with that ID
        at org.veupathdb.lib.s3.workspaces.S3WorkspaceFactory.create(S3WorkspaceFactory.kt:152) ~[service.jar:3.0.0]
@aurreco-uga
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postgres out of sync with minio, there is a fix for 69

@aurreco-uga
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patched May 17 end of day
https://github.com/VEuPathDB/tagger/pull/59

@aurreco-uga
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aurreco-uga commented May 28, 2024

still happening
try
https://microbiomedb.org/analysis/pZ7JWcu

@aurreco-uga
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this seems fixed...

the one difficult to reproduce now is:
Failed to test if object '1cc2f8512d8a2d7db02534ca7ba88be4/.workspace' exists in Bucket

updating teh title.
the user can reload the page and next time it works.

it is related to replication.. ellie cant reproduce locally...

@aurreco-uga aurreco-uga changed the title eda compute: workspace already exists with that ID eda compute: Failed to test if object.... Jun 24, 2024
@aurreco-uga
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aurreco-uga commented Aug 16, 2024

easy to replicate when trying to rerun an expired job.
fut on Aug 16 2024, ellie fixing it.
VEuPathDB/lib-s3-workspace#6

@Foxcapades
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Issue is a bug in MinIO, the workspace library will be patched to account for this bug: VEuPathDB/lib-s3-workspace#6

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