🐍 Update Supported Python Versions (add 3.11 ) (#500)

Adds support for Python 3.11 (beta) - [x] Add 3.11 to the GitHub Actions CI workflow. - [x] Add 3.11 to setup.py - [x] Update pip install workflow. - [x] Update conda requirements python versions. Waiting on some dependencies to update: - [x] Shapely (closed) shapely/shapely#1584 - PyGeos pygeos/pygeos#457 - [x] PyTorch pytorch/pytorch#86566 - [x] PyTorch 2.0 supports Python 3.11 - [ ] `torch.compile` is not fully supported yet. - [x] Scipy 1.9.2 not supported by Scikit-image scikit-image/scikit-image#6773 - [x] numba numba/numba#8304 support https://github.com/numba/numba/milestone/63 - [x] numba/numba#8841 - [x] OpenSlide support for Python 3.11 openslide/openslide-python#189 - [ ] openslide/openslide-python#188 --------- Co-authored-by: Shan E Ahmed Raza <[email protected]>
TissueImageAnalytics · May 5, 2023 · 591482c · 591482c
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commit 591482c
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diff --git a/.github/workflows/pip-install.yml b/.github/workflows/pip-install.yml
@@ -12,7 +12,7 @@ jobs:
     strategy:
       fail-fast: true
       matrix:
-        python-version: ["3.8", "3.9", "3.10"]
+        python-version: ["3.8", "3.9", "3.10", "3.11"]
         os: [ubuntu-22.04, windows-latest, macos-latest]
     steps:
     - name: Set up Python ${{ matrix.python-version }}

diff --git a/.github/workflows/python-package.yml b/.github/workflows/python-package.yml
@@ -17,7 +17,7 @@ jobs:
     strategy:
       fail-fast: true
       matrix:
-        python-version: ["3.8", "3.9", "3.10"]
+        python-version: ["3.8", "3.9", "3.10", "3.11"]
 
     steps:
     - uses: actions/checkout@v3

diff --git a/requirements/requirements.conda.yml b/requirements/requirements.conda.yml
@@ -9,6 +9,6 @@ dependencies:
   - openslide
   - pip>=20.0.2
   - pixman>=0.39.0
-  - python>=3.8, <3.11
+  - python>=3.8, <=3.11
   - pip:
     - -r requirements.txt
diff --git a/requirements/requirements.dev.conda.yml b/requirements/requirements.dev.conda.yml
@@ -9,6 +9,6 @@ dependencies:
   - openslide
   - pip>=20.0.2
   - pixman>=0.39.0
-  - python>=3.8, <3.11
+  - python>=3.8, <=3.11
   - pip:
       - -r requirements_dev.txt
diff --git a/requirements/requirements.txt b/requirements/requirements.txt
@@ -25,7 +25,7 @@ shapely>=2.0.0
 SimpleITK>=2.2.1
 sphinx>=5.3.0
 tifffile>=2022.10.10
-torch>=1.13.1
+torch>=2.0.0
 torchvision>=0.14.1
 tqdm>=4.64.1
 umap-learn>=0.5.3

diff --git a/requirements/requirements.win64.conda.yml b/requirements/requirements.win64.conda.yml
@@ -9,6 +9,6 @@ dependencies:
   - openjpeg>=2.4.0
   - pip>=20.0.2
   - pixman>=0.39.0
-  - python>=3.8, <3.11
+  - python>=3.8, <=3.11
   - pip:
       - -r requirements.txt
diff --git a/requirements/requirements.win64.dev.conda.yml b/requirements/requirements.win64.dev.conda.yml
@@ -9,6 +9,6 @@ dependencies:
   - openjpeg>=2.4.0
   - pip>=20.0.2
   - pixman>=0.39.0
-  - python>=3.8, <3.11
+  - python>=3.8, <=3.11
   - pip:
       - -r requirements_dev.txt
diff --git a/setup.py b/setup.py
@@ -43,6 +43,7 @@
         "Programming Language :: Python :: 3.8",
         "Programming Language :: Python :: 3.9",
         "Programming Language :: Python :: 3.10",
+        "Programming Language :: Python :: 3.11",
     ],
     description="Computational pathology toolbox developed by TIA Centre.",
     dependency_links=dependency_links,