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DESCRIPTION
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DESCRIPTION
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Package: tiledbsc
Type: Package
Title: TileDB Single Cell SOMA API
Description: Interface for working with 'TileDB'-based Stack of Matrices,
Annotated ('SOMA'): an open data model for representing annotated matrices,
like those commonly used for single cell data analysis. Users can import
from and export to in-memory formats used by popular toolchains like
'Seurat', 'Bioconductor', and even 'AnnData' using the companion Python
package.
Version: 0.1.5.9002
Authors@R: c(
person(given = "Aaron",
family = "Wolen",
role = c("cre", "aut"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-2542-2202")),
person(given = "Dirk",
family = "Eddelbuettel",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0001-6419-907X")),
person(given = "John",
family = "Kerl",
email = "[email protected]",
role = "aut"),
person(given = "TileDB, Inc.",
role = c("cph", "fnd"))
)
URL: https://github.com/TileDB-Inc/tiledbsc,
https://github.com/single-cell-data/SOMA
BugReports: https://github.com/TileDB-Inc/tiledbsc/issues
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports:
R6,
methods,
Matrix (>= 1.5.3),
tiledb (>= 0.18.0),
SeuratObject,
jsonlite,
glue,
utils,
stats,
fs,
urltools,
vctrs
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Suggests:
rmarkdown,
knitr,
withr,
testthat (>= 3.0.0),
SummarizedExperiment,
SingleCellExperiment
VignetteBuilder: knitr
Config/testthat/edition: 2