0.23.0

What's Changed

• Improve performance of loading VCF headers by @gspowley in #483
• limit headers to one for in-memory exports by @awenocur in #479
• Memory usage and latency improvements by @gspowley in #489
• Release python GIL by @gspowley in #495
• Revert changes to fetch_vcf_headers_v4 by @gspowley in #496
• fix race by @awenocur in #502
• preparatory changes for msvc windows build using .dll version of htslib by @dhoke4tdb in #484
• change to use preprocessor '&&' operator by @dhoke4tdb in #506
• Handle one missing allele in stats arrays by @gspowley in #504
• Consolidate/vacuum stats array fix by @gspowley in #509
• Upgrade TileDB-VCF to 2.15 by @awenocur in #510

New Contributors

• @dhoke4tdb made their first contribution in #484

Full Changelog: 0.22.0...0.23.0

0.22.2

Changes:

• 7eae0d1 update Gradle files for release 0.22.2 (#501)
• 38608f2 Revert changes to fetch_vcf_headers_v4 (#496) (#499)
• 2c542aa Release python GIL (#495) (#498)

0.22.1

Warning:

This release includes a regression that interferes with reading of annotation VCFs.

Changes:

• a26510f update Gradle files for release 0.22.1 (#494)
• 8bec549 Async mode for AF filtering (#489) (#491)
• 27b4a5b limit headers to one for in-memory exports (#479) (#488)
• fa4a1f8 Improve performance of loading VCF headers (#483) (#486)

This list of changes was auto generated.

0.21.2

Warning:

This release includes a regression that interferes with reading of annotation VCFs.

Changes:

• c074506 update Gradle files for release 0.21.2 (#492)
• db1b58d Async mode for AF filtering (#489) (#490)
• f2fbf5a limit headers to one for in-memory exports (#479) (#487)
• 0cdf1fc Improve performance of loading VCF headers (#483) (#485)
• 8152ae8 Backport 0.22 changes to 0.21 (#482) [ #474, #476, #477 ]
• cd6f140 catch empty samples URI list to avoid segfault (#474) (#475)

This list of changes was auto generated.

0.21.1

Changes:

• 8152ae8 Backport 0.22 changes to 0.21 (#482) [ #474, #476, #477 ]
• cd6f140 catch empty samples URI list to avoid segfault (#474) (#475)

This list of changes was auto generated.

0.22.0

Changes:

• 6bcbc68 Upgrade TileDB-VCF to 2.14 (#478)
• 33c0412 Group usage fix and improvements (#477)
• 1e6d3ee Add feature to delete samples (#476)
• 461ca0b catch empty samples URI list to avoid segfault (#474)

This list of changes was auto generated.

0.21.0

What's Changed

• Add support for TileDB Embedded 2.13.0
• Finalize data fragments last during ingestion. by @gspowley in #467
• Improve consolidate and vacuum by @gspowley in #468
• Add zstd compression to the sample dimension by @gspowley in #469
• Add AF filtering for release 0.21 by @awenocur in #473

Full Changelog: 0.20.2...0.21.0

0.20.2

Changes:

• 47f716b Update to Embedded 2.12.2 (#466)

This list of changes was auto generated.

0.20.1

Changes:

• c0a8d76 Update java/spark for version 0.20.1 (#465)
• 52221c8 Create new query after finalize in stats ingestion tasks (#464)

This list of changes was auto generated.

0.20.0

Changes:

• 9f93e75 Merge pull request #463 from TileDB-Inc/gspowley/sc-22800/skip-test-with-tiledb-py
• 31d620e Skip test using tiledb-py
• de8e663 Merge pull request #462 from TileDB-Inc/adamwenocur/sc-22758
• b903480 Update java/spark for version 0.19.0

This list of changes was auto generated.