Merge pull request #4 from SuLab/main

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SuLab · Dec 4, 2021 · 328ba69 · 328ba69
2 parents 7d13ab4 + b3e30bf
commit 328ba69
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Showing 3 changed files with 137 additions and 51 deletions.
diff --git a/indication_paths.json b/indication_paths.json
@@ -291772,5 +291772,89 @@
       "https://drugs.ncats.io/drug/YQE403BP4D",
       "https://en.wikipedia.org/wiki/Barbiturate#Mechanism_of_action"
     ]
+  },
+  {
+    "directed": true,
+    "graph": {
+      "_id": "DB06149_MESH_D013203_1",
+      "disease": "Staphylococcal infectious disease",
+      "disease_mesh": "MESH:D013203",
+      "drug": "teicoplanin",
+      "drug_mesh": "MESH:D017334",
+      "drugbank": "DB:DB06149"
+    },
+    "links": [
+      {
+        "key": "negatively regulates",
+        "source": "MESH:D017334",
+        "target": "MESH:C002956"
+      },
+      {
+        "key": "participates in",
+        "source": "MESH:C002956",
+        "target": "GO:0009252"
+      },
+      {
+        "key": "positively regulates",
+        "source": "GO:0009252",
+        "target": "GO:0009273"
+      },
+      {
+        "key": "positively correlated with",
+        "source": "GO:0009273",
+        "target": "GO:0051301"
+      },
+      {
+        "key": "occurs in",
+        "source": "GO:0051301",
+        "target": "NCBITaxon:1279"
+      },
+      {
+        "key": "causes",
+        "source": "NCBITaxon:1279",
+        "target": "MESH:D013203"
+      }
+    ],
+    "multigraph": true,
+    "nodes": [
+      {
+        "id": "MESH:D017334",
+        "label": "Drug",
+        "name": "Teicoplanin"
+      },
+      {
+        "id": "MESH:C002956",
+        "label": "ChemicalSubstance",
+        "name": "Alanylalanine"
+      },
+      {
+        "id": "GO:0009252",
+        "label": "BiologicalProcess",
+        "name": "Peptidoglycan biosynthetic process"
+      },
+      {
+        "id": "GO:0009273",
+        "label": "BiologicalProcess",
+        "name": "Peptidoglycan-based cell wall biogenesis"
+      },
+      {
+        "id": "GO:0051301",
+        "label": "BiologicalProcess",
+        "name": "Cell division"
+      },
+      {
+        "id": "NCBITaxon:1279",
+        "label": "OrganismTaxon",
+        "name": "Staphylococcus"
+      },
+      {
+        "id": "MESH:D013203",
+        "label": "Disease",
+        "name": "Staphylococcal infectious disease"
+      }
+    ],
+    "reference": [
+      "https://go.drugbank.com/drugs/DB06149"
+    ]
   }
 ]
diff --git a/indication_paths.yaml b/indication_paths.yaml
@@ -183390,3 +183390,55 @@
     - https://go.drugbank.com/drugs/DB01174#BE0000795
     - https://drugs.ncats.io/drug/YQE403BP4D
     - https://en.wikipedia.org/wiki/Barbiturate#Mechanism_of_action
+-   directed: true
+    graph:
+        _id: DB06149_MESH_D013203_1
+        disease: Staphylococcal infectious disease
+        disease_mesh: MESH:D013203
+        drug: teicoplanin
+        drug_mesh: MESH:D017334
+        drugbank: DB:DB06149
+    links:
+    -   key: negatively regulates
+        source: MESH:D017334
+        target: MESH:C002956
+    -   key: participates in
+        source: MESH:C002956
+        target: GO:0009252
+    -   key: positively regulates
+        source: GO:0009252
+        target: GO:0009273
+    -   key: positively correlated with
+        source: GO:0009273
+        target: GO:0051301
+    -   key: occurs in
+        source: GO:0051301
+        target: NCBITaxon:1279
+    -   key: causes
+        source: NCBITaxon:1279
+        target: MESH:D013203
+    multigraph: true
+    nodes:
+    -   id: MESH:D017334
+        label: Drug
+        name: Teicoplanin
+    -   id: MESH:C002956
+        label: ChemicalSubstance
+        name: Alanylalanine
+    -   id: GO:0009252
+        label: BiologicalProcess
+        name: Peptidoglycan biosynthetic process
+    -   id: GO:0009273
+        label: BiologicalProcess
+        name: Peptidoglycan-based cell wall biogenesis
+    -   id: GO:0051301
+        label: BiologicalProcess
+        name: Cell division
+    -   id: NCBITaxon:1279
+        label: OrganismTaxon
+        name: Staphylococcus
+    -   id: MESH:D013203
+        label: Disease
+        name: Staphylococcal infectious disease
+    reference:
+    - https://go.drugbank.com/drugs/DB06149
diff --git a/submission.yaml b/submission.yaml
@@ -1,51 +1 @@
--   directed: true
-    graph:
-        disease: Staphylococcal infectious disease
-        disease_mesh: MESH:D013203
-        drug: teicoplanin
-        drug_mesh: MESH:D017334
-        drugbank: DB:DB06149
-    links:
-    -   key: negatively regulates
-        source: MESH:D017334
-        target: MESH:C002956
-    -   key: participates in
-        source: MESH:C002956
-        target: GO:0009252
-    -   key: positively regulates
-        source: GO:0009252
-        target: GO:0009273
-    -   key: positively correlated with
-        source: GO:0009273
-        target: GO:0051301
-    -   key: occurs in
-        source: GO:0051301
-        target: NCBITaxon:1279
-    -   key: causes
-        source: NCBITaxon:1279
-        target: MESH:D013203
-    multigraph: true
-    nodes:
-    -   id: MESH:D017334
-        label: Drug
-        name: Teicoplanin
-    -   id: MESH:C002956
-        label: ChemicalSubstance
-        name: Alanylalanine
-    -   id: GO:0009252
-        label: BiologicalProcess
-        name: Peptidoglycan biosynthetic process
-    -   id: GO:0009273
-        label: BiologicalProcess
-        name: Peptidoglycan-based cell wall biogenesis
-    -   id: GO:0051301
-        label: BiologicalProcess
-        name: Cell division
-    -   id: NCBITaxon:1279
-        label: OrganismTaxon
-        name: Staphylococcus
-    -   id: MESH:D013203
-        label: Disease
-        name: Staphylococcal infectious disease
-    reference:
-    - https://go.drugbank.com/drugs/DB06149
+