fix(Pose): remove config_file
from class property
#120
Workflow file for this run
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# Builds the aeon environment; lints formatting and smells via ruff; checks type annotations via pyright; | |
# tests via pytest; reports test coverage via pytest-cov and codecov. | |
name: build_env_run_tests | |
on: | |
pull_request: | |
branches: [ main ] | |
types: [opened, reopened, synchronize] | |
workflow_dispatch: # allows running manually from Github's 'Actions' tab | |
jobs: | |
build_env_pip_pyproject: # checks only for building env using pip and pyproject.toml | |
name: Build env using pip and pyproject.toml | |
runs-on: ubuntu-latest | |
if: github.event.pull_request.draft == false | |
strategy: | |
matrix: | |
os: [ubuntu-latest, windows-latest, macos-latest] | |
python-version: [3.11] | |
fail-fast: false | |
defaults: | |
run: | |
shell: bash -l {0} # reset shell for each step | |
steps: | |
- name: Checkout code | |
uses: actions/checkout@v2 | |
- name: Set up Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Create venv and install dependencies | |
run: | | |
python -m venv .venv | |
source .venv/bin/activate | |
pip install -e .[dev] | |
pip list | |
.venv/bin/python -c "import aeon" | |
build_env_run_tests: # checks for building env using mamba and runs codebase checks and tests | |
name: Build env and run tests on ${{ matrix.os }} | |
runs-on: ${{ matrix.os }} | |
if: github.event.pull_request.draft == false | |
strategy: | |
matrix: | |
os: [ubuntu-latest, windows-latest, macos-latest] | |
python-version: [3.11] | |
fail-fast: false | |
defaults: | |
run: | |
shell: bash -l {0} # reset shell for each step | |
steps: | |
- name: checkout repo | |
uses: actions/checkout@v2 | |
- name: set up conda env | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
use-mamba: true | |
miniforge-variant: Mambaforge | |
python-version: ${{ matrix.python-version }} | |
environment-file: ./env_config/env.yml | |
activate-environment: aeon | |
- name: Update conda env with dev reqs | |
run: mamba env update -f ./env_config/env_dev.yml | |
# Only run codebase checks and tests for ubuntu. | |
- name: ruff | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m ruff check --config ./pyproject.toml . | |
- name: pyright | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m pyright --level error --project ./pyproject.toml . | |
- name: pytest | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m pytest tests/ | |
- name: generate test coverage report | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
python -m pytest --cov=aeon ./tests/ --cov-report=xml:./tests/test_coverage/test_coverage_report.xml | |
#python -m pytest --cov=aeon ./tests/ --cov-report=html:./tests/test_coverage/test_coverage_report_html | |
- name: upload test coverage report to codecov | |
if: matrix.os == 'ubuntu-latest' | |
uses: codecov/codecov-action@v2 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
directory: ./tests/test_coverage/ | |
files: test_coverage_report.xml | |
fail_ci_if_error: true | |
verbose: true |