From 4906d7606975b3ff2f4192e2983c2c9b8d2e623f Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Tue, 26 Dec 2023 20:11:58 +0000
Subject: [PATCH] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 reproschema/cli.py                |  5 +++--
 reproschema/redcap2reproschema.py | 10 ++++++++--
 2 files changed, 11 insertions(+), 4 deletions(-)

diff --git a/reproschema/cli.py b/reproschema/cli.py
index 88655e5..663ce56 100644
--- a/reproschema/cli.py
+++ b/reproschema/cli.py
@@ -98,9 +98,10 @@ def serve(port):
 
     start_server(port=port)
 
+
 @main.command()
-@click.argument('csv_path', type=click.Path(exists=True, dir_okay=False))
-@click.argument('yaml_path', type=click.Path(exists=True, dir_okay=False))
+@click.argument("csv_path", type=click.Path(exists=True, dir_okay=False))
+@click.argument("yaml_path", type=click.Path(exists=True, dir_okay=False))
 def redcap2reproschema(csv_path, yaml_path):
     """
     Convert REDCap CSV files to Reproschema format.
diff --git a/reproschema/redcap2reproschema.py b/reproschema/redcap2reproschema.py
index c08c6b1..de24ae9 100644
--- a/reproschema/redcap2reproschema.py
+++ b/reproschema/redcap2reproschema.py
@@ -8,6 +8,7 @@
 import yaml
 from bs4 import BeautifulSoup
 
+
 def normalize_condition(condition_str):
     re_parentheses = re.compile(r"\(([0-9]*)\)")
     re_non_gt_lt_equal = re.compile(r"([^>|<])=")
@@ -451,9 +452,13 @@ def redcap2reproschema(csv_path, yaml_path, schema_context_url=None):
         protocol_visibility_obj,
     )
 
+
 def main():
     import argparse
-    parser = argparse.ArgumentParser(description="Convert REDCap data dictionary to Reproschema format.")
+
+    parser = argparse.ArgumentParser(
+        description="Convert REDCap data dictionary to Reproschema format."
+    )
     parser.add_argument("csv_file", help="Path to the REDCap data dictionary CSV file.")
     parser.add_argument("yaml_file", help="Path to the Reproschema protocol YAML file.")
     args = parser.parse_args()
@@ -475,5 +480,6 @@ def main():
     # Call the main conversion function
     redcap2reproschema(args.csv_file, args.yaml_file)
 
+
 if __name__ == "__main__":
-    main()
\ No newline at end of file
+    main()