diff --git a/.github/actions/setup-poetry/action.yml b/.github/actions/setup-poetry/action.yml index bdd60d6b..df83267b 100644 --- a/.github/actions/setup-poetry/action.yml +++ b/.github/actions/setup-poetry/action.yml @@ -5,7 +5,7 @@ description: | inputs: python-version: description: Python version to use - default: '3.8' + default: '3.10' install-dependencies: description: Whether to install and cache/restore dependencies default: 'true' diff --git a/Makefile b/Makefile index e0d3b65b..abe081fc 100644 --- a/Makefile +++ b/Makefile @@ -26,8 +26,9 @@ clean: ## clean project .PHONY: audit audit: ## Audit project dependencies - poetry export --without-hashes | poetry run safety check --full-report --stdin \ - --ignore 61496 --ignore 70612 --ignore 71596 + poetry export --without-hashes --all-extras --without dev --without playbook \ + | poetry run safety check --full-report --stdin \ + --ignore 61496 --ignore 70612 --ignore 71596 --ignore 73323 pnpm audit --prod .PHONY: check-format diff --git a/package.json b/package.json index 88b9f9c8..706cc0b4 100644 --- a/package.json +++ b/package.json @@ -53,7 +53,7 @@ "d3-time-format": "^4.1.0", "d3-zoom": "^3.0.0", "detect-gpu": "^5.0.12", - "dompurify": "^3.0.3", + "dompurify": "^3.1.3", "fast-levenshtein": "^3.0.0", "file-saver": "^2.0.5", "flexlayout-react": "^0.7.6", @@ -61,6 +61,7 @@ "immer": "^9.0.19", "localforage": "^1.10.0", "lodash": "^4.17.21", + "micromatch": "4.0.8", "moment": "^2.29.4", "numbro": "^2.3.6", "prop-types": "^15.8.1", diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index 949c5996..1e2a45ab 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -87,8 +87,8 @@ importers: specifier: ^5.0.12 version: 5.0.12 dompurify: - specifier: ^3.0.3 - version: 3.0.3 + specifier: ^3.1.3 + version: 3.1.3 fast-levenshtein: specifier: ^3.0.0 version: 3.0.0 @@ -110,6 +110,9 @@ importers: lodash: specifier: ^4.17.21 version: 4.17.21 + micromatch: + specifier: 4.0.8 + version: 4.0.8 moment: specifier: ^2.29.4 version: 2.29.4 @@ -2231,8 +2234,8 @@ packages: resolution: {integrity: sha512-IGBwjF7tNk3cwypFNH/7bfzBcgSCbaMOD3GsaY1AU/JRrnHnYgEM0+9kQt52iZxjNsjBtJYtao146V+f8jFZNw==} engines: {node: '>=10'} - dompurify@3.0.3: - resolution: {integrity: sha512-axQ9zieHLnAnHh0sfAamKYiqXMJAVwu+LM/alQ7WDagoWessyWvMSFyW65CqF3owufNu8HBcE4cM2Vflu7YWcQ==} + dompurify@3.1.3: + resolution: {integrity: sha512-5sOWYSNPaxz6o2MUPvtyxTTqR4D3L77pr5rUQoWgD5ROQtVIZQgJkXbo1DLlK3vj11YGw5+LnF4SYti4gZmwng==} draco3d@1.5.6: resolution: {integrity: sha512-+3NaRjWktb5r61ZFoDejlykPEFKT5N/LkbXsaddlw6xNSXBanUYpFc2AXXpbJDilPHazcSreU/DpQIaxfX0NfQ==} @@ -3232,8 +3235,8 @@ packages: peerDependencies: three: '>=0.137' - micromatch@4.0.5: - resolution: {integrity: sha512-DMy+ERcEW2q8Z2Po+WNXuw3c5YaUSFjAO5GsJqfEl7UjvtIuFKO6ZrKvcItdy98dwFI2N1tg3zNIdKaQT+aNdA==} + micromatch@4.0.8: + resolution: {integrity: sha512-PXwfBhYu0hBCPw8Dn0E+WDYb7af3dSLVWKi3HGv84IdF4TyFoC0ysxFd0Goxw7nSv4T/PzEJQxsYsEiFCKo2BA==} engines: {node: '>=8.6'} miller-rabin@4.0.1: @@ -5079,7 +5082,7 @@ snapshots: jest-util: 29.6.2 jest-validate: 29.6.2 jest-watcher: 29.6.2 - micromatch: 4.0.5 + micromatch: 4.0.8 pretty-format: 29.6.2 slash: 3.0.0 strip-ansi: 6.0.1 @@ -5190,7 +5193,7 @@ snapshots: jest-haste-map: 29.6.2 jest-regex-util: 29.4.3 jest-util: 29.6.2 - micromatch: 4.0.5 + micromatch: 4.0.8 pirates: 4.0.6 slash: 3.0.0 write-file-atomic: 4.0.2 @@ -6797,7 +6800,7 @@ snapshots: domain-browser@4.22.0: {} - dompurify@3.0.3: {} + dompurify@3.1.3: {} draco3d@1.5.6: {} @@ -7157,7 +7160,7 @@ snapshots: '@nodelib/fs.walk': 1.2.8 glob-parent: 5.1.2 merge2: 1.4.1 - micromatch: 4.0.5 + micromatch: 4.0.8 fast-json-stable-stringify@2.1.0: {} @@ -7675,7 +7678,7 @@ snapshots: jest-runner: 29.6.2 jest-util: 29.6.2 jest-validate: 29.6.2 - micromatch: 4.0.5 + micromatch: 4.0.8 parse-json: 5.2.0 pretty-format: 29.6.2 slash: 3.0.0 @@ -7727,7 +7730,7 @@ snapshots: jest-regex-util: 29.4.3 jest-util: 29.6.2 jest-worker: 29.6.2 - micromatch: 4.0.5 + micromatch: 4.0.8 walker: 1.0.8 optionalDependencies: fsevents: 2.3.3 @@ -7751,7 +7754,7 @@ snapshots: '@types/stack-utils': 2.0.1 chalk: 4.1.2 graceful-fs: 4.2.11 - micromatch: 4.0.5 + micromatch: 4.0.8 pretty-format: 29.6.2 slash: 3.0.0 stack-utils: 2.0.6 @@ -8080,7 +8083,7 @@ snapshots: dependencies: three: 0.149.0 - micromatch@4.0.5: + micromatch@4.0.8: dependencies: braces: 3.0.3 picomatch: 2.3.1 @@ -9021,7 +9024,7 @@ snapshots: is-glob: 4.0.3 jiti: 1.19.1 lilconfig: 2.1.0 - micromatch: 4.0.5 + micromatch: 4.0.8 normalize-path: 3.0.0 object-hash: 3.0.0 picocolors: 1.0.0 diff --git a/poetry.lock b/poetry.lock index 9c79a77b..bca6a540 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.4 and should not be changed by hand. 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+soxr = "*" [tool.poetry.group.playbook.dependencies] -towhee = "^0.9.0" annoy = "^1.17.2" cleanlab = "^2.4.0" torch = { version = "^2.1.1+cpu", source = "torch-cpu" } diff --git a/renumics/spotlight/embeddings/embedders/gte.py b/renumics/spotlight/embeddings/embedders/gte.py index 677d9fae..bbc51f66 100644 --- a/renumics/spotlight/embeddings/embedders/gte.py +++ b/renumics/spotlight/embeddings/embedders/gte.py @@ -40,8 +40,8 @@ def gte(batches: Iterable[List[str]]) -> Iterable[List[Optional[np.ndarray]]]: ) with torch.no_grad(): outputs = model(**inputs) - embeddings = average_pool( + embeddings_tensor = average_pool( outputs.last_hidden_state, inputs["attention_mask"] ) - embeddings = F.normalize(embeddings, p=2, dim=1).cpu().numpy() + embeddings = F.normalize(embeddings_tensor, p=2, dim=1).cpu().numpy() yield list(embeddings) diff --git a/renumics/spotlight/io/audio.py b/renumics/spotlight/io/audio.py index 648e8534..644e35be 100644 --- a/renumics/spotlight/io/audio.py +++ b/renumics/spotlight/io/audio.py @@ -25,6 +25,28 @@ } +def _channel_num_to_layout(channel_num: int) -> str: + if channel_num == 1: + return "mono" + if channel_num == 2: + return "stereo" + if channel_num == 3: + return "3.0" + if channel_num == 4: + return "4.0" + if channel_num == 5: + return "5.0" + if channel_num == 6: + return "6.0" + if channel_num == 7: + return "7.0" + if channel_num == 8: + return "7.1" + raise ValueError( + f"Only channel number from 1 to 8 are supported, but {channel_num} received." + ) + + def prepare_input_file( file: FileType, timeout: Union[int, float] = 30, reusable: bool = False ) -> Union[str, IO]: @@ -55,7 +77,7 @@ def prepare_input_file( response = requests.get(file, headers=headers, stream=True, timeout=timeout) if response.ok: if not reusable: - return response.raw + return response.raw # type: ignore[return-value] return io.BytesIO(response.content) raise ValueError(f"URL {file} not found.") if not os.path.isfile(file): @@ -125,13 +147,13 @@ def 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