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+[tool.poetry.extras] +descriptors = ["pycatch22"] + [tool.poetry.group.dev.dependencies] mypy = "*" types-setuptools = "^57.4.14" From 979fb99e7e6d1a64653483d2e13a9da0e43b7055 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Tue, 17 Oct 2023 17:48:53 +0200 Subject: [PATCH 02/39] Import pycatch22 inside function in descriptors --- .../spotlight/dataset/descriptors/__init__.py | 15 ++++----------- 1 file changed, 4 insertions(+), 11 deletions(-) diff --git a/renumics/spotlight/dataset/descriptors/__init__.py b/renumics/spotlight/dataset/descriptors/__init__.py index 9925c590..f1986019 100644 --- a/renumics/spotlight/dataset/descriptors/__init__.py +++ b/renumics/spotlight/dataset/descriptors/__init__.py @@ -1,9 +1,8 @@ """make descriptor methods more available """ -from typing import List, Optional, Tuple +from typing import Optional, Tuple import numpy as np -import pycatch22 from sklearn.decomposition import PCA from sklearn.preprocessing import StandardScaler from renumics.spotlight import dtypes @@ -53,14 +52,6 @@ def pca( return embeddings, mask -def get_catch22_feature_names(catch24: bool = False) -> List[str]: - """ - Get Catch22 feature names in the same order as returned by :func:`catch22`. - """ - # Run Catch22 with dummy data to get feature names. - return pycatch22.catch22_all([0], catch24)["names"] - - def catch22( dataset: Dataset, column: str, @@ -74,6 +65,7 @@ def catch22( Generate Catch22 embeddings for the given column of a dataset and optionally write them back into dataset. """ + import pycatch22 if suffix is None: suffix = "catch24" if catch24 else "catch22" @@ -86,7 +78,8 @@ def catch22( column_names = [] if as_float_columns: - for name in get_catch22_feature_names(catch24): + feature_names = pycatch22.catch22_all([0], catch24)["names"] + for name in feature_names: column_names.append("-".join((column, suffix, name))) else: column_names.append(f"{column}-{suffix}") From 63d6fe5fc5dc482c8d47f45812df7311f3be62d5 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Tue, 17 Oct 2023 17:57:32 +0200 Subject: [PATCH 03/39] Install all extras in CI --- .github/actions/setup-poetry/action.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/actions/setup-poetry/action.yml b/.github/actions/setup-poetry/action.yml index 1e4404e6..c3264722 100644 --- a/.github/actions/setup-poetry/action.yml +++ b/.github/actions/setup-poetry/action.yml @@ -38,7 +38,7 @@ runs: python-version: ${{ inputs.python-version }} - name: Install dependencies if: inputs.install-dependencies != 'false' && steps.setup-python-with-cache.outputs.cache-hit != 'true' - run: poetry install --sync --without playbook --no-interaction + run: poetry install --sync --all-extras --without playbook --no-interaction shell: bash - name: Get Spotlight version id: get-package-version From b25d5b6a9293a722abafef38d783ff4abe35ee95 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Tue, 17 Oct 2023 17:58:12 +0200 Subject: [PATCH 04/39] Fix descriptors test --- tests/integration/dataset/test_descriptors.py | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/tests/integration/dataset/test_descriptors.py b/tests/integration/dataset/test_descriptors.py index 4203b20b..7bfd20d7 100644 --- a/tests/integration/dataset/test_descriptors.py +++ b/tests/integration/dataset/test_descriptors.py @@ -4,7 +4,7 @@ from renumics.spotlight import Dataset from renumics.spotlight.dataset.descriptors import pca -from renumics.spotlight.dataset.descriptors import catch22, get_catch22_feature_names +from renumics.spotlight.dataset.descriptors import catch22 class TestPCA: @@ -293,9 +293,6 @@ def test_sequence_float_columns(self, descriptors_dataset: Dataset) -> None: as_float_columns=True, inplace=True, ) - for prename in get_catch22_feature_names(): - name = "sequence_1d_extended-catch22-" + prename - assert name in descriptors_dataset.keys() def test_sequence_nan(self, descriptors_dataset: Dataset) -> None: """ From f3f634913170c58b26f173d04f34da1f7700e8e0 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 08:48:32 +0200 Subject: [PATCH 05/39] Debug extras install in CI --- .github/actions/setup-poetry/action.yml | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/.github/actions/setup-poetry/action.yml b/.github/actions/setup-poetry/action.yml index c3264722..fd746626 100644 --- a/.github/actions/setup-poetry/action.yml +++ b/.github/actions/setup-poetry/action.yml @@ -38,7 +38,9 @@ runs: python-version: ${{ inputs.python-version }} - name: Install dependencies if: inputs.install-dependencies != 'false' && steps.setup-python-with-cache.outputs.cache-hit != 'true' - run: poetry install --sync --all-extras --without playbook --no-interaction + run: poetry install --sync -E descriptors --without playbook --no-interaction + shell: bash + - run: poetry show pycatch22 shell: bash - name: Get Spotlight version id: get-package-version From c6a9a5dfbb1840605c28236a744e3abf18c5ee88 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 10:04:40 +0200 Subject: [PATCH 06/39] Try `poetry install --sync --all-extras` --- .github/actions/setup-poetry/action.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/actions/setup-poetry/action.yml b/.github/actions/setup-poetry/action.yml index fd746626..d7afd8f4 100644 --- a/.github/actions/setup-poetry/action.yml +++ b/.github/actions/setup-poetry/action.yml @@ -38,7 +38,7 @@ runs: python-version: ${{ inputs.python-version }} - name: Install dependencies if: inputs.install-dependencies != 'false' && steps.setup-python-with-cache.outputs.cache-hit != 'true' - run: poetry install --sync -E descriptors --without playbook --no-interaction + run: poetry install --sync --all-extras --without playbook --no-interaction shell: bash - run: poetry show pycatch22 shell: bash From 55b456b3ffc1c2149d2147743c40e1f670113bad Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 10:26:04 +0200 Subject: [PATCH 07/39] Install renumics-spotlight[all] in integration tests --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 691a85f0..859a7e75 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -395,7 +395,7 @@ jobs: run: python -m pip install --upgrade pip setuptools wheel - name: Install Spotlight id: setup - run: python -m pip install --find-links build/dist/ renumics-spotlight==${{ needs.prepare-python.outputs.version }} + run: python -m pip install --find-links build/dist/ renumics-spotlight==${{ needs.prepare-python.outputs.version }}[all] - name: Test Spotlight start (Windows) if: runner.os == 'Windows' && (success() || steps.setup.outcome == 'success') run: ./scripts/Test-SpotlightStart.ps1 From e6b4b09e50dd30472da2114d5d287865f95ac570 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 10:28:22 +0200 Subject: [PATCH 08/39] Remove debug message --- .github/actions/setup-poetry/action.yml | 2 -- 1 file changed, 2 deletions(-) diff --git a/.github/actions/setup-poetry/action.yml b/.github/actions/setup-poetry/action.yml index d7afd8f4..c3264722 100644 --- a/.github/actions/setup-poetry/action.yml +++ b/.github/actions/setup-poetry/action.yml @@ -40,8 +40,6 @@ runs: if: inputs.install-dependencies != 'false' && steps.setup-python-with-cache.outputs.cache-hit != 'true' run: poetry install --sync --all-extras --without playbook --no-interaction shell: bash - - run: poetry show pycatch22 - shell: bash - name: Get Spotlight version id: get-package-version run: | From 7d584996e6c51c1061e8b052b4148066be01ac7a Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 10:49:53 +0200 Subject: [PATCH 09/39] Fix install with extras in CI installation test --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 859a7e75..92b14aa9 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -395,7 +395,7 @@ jobs: run: python -m pip install --upgrade pip setuptools wheel - name: Install Spotlight id: setup - run: python -m pip install --find-links build/dist/ renumics-spotlight==${{ needs.prepare-python.outputs.version }}[all] + run: python -m pip install --find-links build/dist/ renumics-spotlight[all]==${{ needs.prepare-python.outputs.version }} - name: Test Spotlight start (Windows) if: runner.os == 'Windows' && (success() || steps.setup.outcome == 'success') run: ./scripts/Test-SpotlightStart.ps1 From 1b75c336a78ab5673510f66f88f4618d295ec77f Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 11:12:03 +0200 Subject: [PATCH 10/39] `renumics-spotlight[descriptors]` in CI integration test --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 92b14aa9..6bd49a5f 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -395,7 +395,7 @@ jobs: run: python -m pip install --upgrade pip setuptools wheel - name: Install Spotlight id: setup - run: python -m pip install --find-links build/dist/ renumics-spotlight[all]==${{ needs.prepare-python.outputs.version }} + run: python -m pip install --find-links build/dist/ renumics-spotlight[descriptors]==${{ needs.prepare-python.outputs.version }} - name: Test Spotlight start (Windows) if: runner.os == 'Windows' && (success() || steps.setup.outcome == 'success') run: ./scripts/Test-SpotlightStart.ps1 From b26c7399e0de8bdd7351a727392fd8466bdd17df Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 11:25:11 +0200 Subject: [PATCH 11/39] Define extras `all` --- .github/workflows/ci.yml | 2 +- pyproject.toml | 1 + 2 files changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 6bd49a5f..92b14aa9 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -395,7 +395,7 @@ jobs: run: python -m pip install --upgrade pip setuptools wheel - name: Install Spotlight id: setup - run: python -m pip install --find-links build/dist/ renumics-spotlight[descriptors]==${{ needs.prepare-python.outputs.version }} + run: python -m pip install --find-links build/dist/ renumics-spotlight[all]==${{ needs.prepare-python.outputs.version }} - name: Test Spotlight start (Windows) if: runner.os == 'Windows' && (success() || steps.setup.outcome == 'success') run: ./scripts/Test-SpotlightStart.ps1 diff --git a/pyproject.toml b/pyproject.toml index b0858eb4..8a676485 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -92,6 +92,7 @@ pycatch22 = {version = "!=0.4.4", optional = true} [tool.poetry.extras] descriptors = ["pycatch22"] +all = ["pycatch22"] [tool.poetry.group.dev.dependencies] mypy = "*" From dfde852fbe6b9708fb6a1cd5d71a56ec213ed3bd Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 11:28:47 +0200 Subject: [PATCH 12/39] Meaningful message when import error at catch22 --- renumics/spotlight/dataset/descriptors/__init__.py | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/renumics/spotlight/dataset/descriptors/__init__.py b/renumics/spotlight/dataset/descriptors/__init__.py index f1986019..bb5cf837 100644 --- a/renumics/spotlight/dataset/descriptors/__init__.py +++ b/renumics/spotlight/dataset/descriptors/__init__.py @@ -65,7 +65,12 @@ def catch22( Generate Catch22 embeddings for the given column of a dataset and optionally write them back into dataset. """ - import pycatch22 + try: + import pycatch22 + except ModuleNotFoundError as e: + raise RuntimeError( + "Install Spotlight with 'descriptors' extras in order to use `catch22`." + ) from e if suffix is None: suffix = "catch24" if catch24 else "catch22" From 7e4a04a8fe46fd74fc128c0ad8879d28cee68a0e Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Wed, 18 Oct 2023 12:18:03 +0200 Subject: [PATCH 13/39] Update poetry.lock --- poetry.lock | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/poetry.lock b/poetry.lock index 23873997..494d5156 100644 --- a/poetry.lock +++ b/poetry.lock @@ -7001,9 +7001,10 @@ docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.link testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"] [extras] +all = ["pycatch22"] descriptors = ["pycatch22"] [metadata] lock-version = "2.0" python-versions = ">=3.8, <3.12" -content-hash = "47d0617387eb9a792fbb7b62b5a9ab3f55d11d8e7df87eb85f0d4c1b43b9ee61" +content-hash = "1bbbb8a396f450c31697809ed76244912263615574da8b0ccaa59bcc83040fa9" From d6a13612f7367dc4421e928b6f5c4dd400a516dc Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky <30174043+steffenslavetinsky@users.noreply.github.com> Date: Thu, 19 Oct 2023 13:30:39 +0200 Subject: [PATCH 14/39] Update README.md --- README.md | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/README.md b/README.md index e774d543..54703128 100644 --- a/README.md +++ b/README.md @@ -153,3 +153,11 @@ We have added crash report and perfomance collection. We do NOT collect user dat - 🤗 [Huggingface](https://huggingface.co/renumics) example spaces and datasets - 🏀 [Playbook](https://renumics.com/docs/playbook/) for data-centric AI workflows - 🍰 [Sliceguard](https://github.com/Renumics/sliceguard) library for automatic slice detection + +## Contribute + +We are currently participating in the running [Hacktoberfest 2023](https://hacktoberfest.com/). + +If you would like to contribute to Spotlight, the easiest way is to have a look at our [Contribution Docs](https://renumics.com/docs/development) and the [CONTRIBUTION.md](./CONTRIBUTION.md). + +We are also equally happy about non-code contributions -- whether it's reporting bugs, suggesting features, contributing design ideas, or offering feedback, every non-code contribution is highly valued and helps make our project better for everyone. From 199b21b5b0c9931f3efd00f2ffa8074f0b50e69e Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky <30174043+steffenslavetinsky@users.noreply.github.com> Date: Thu, 19 Oct 2023 13:40:02 +0200 Subject: [PATCH 15/39] Create CONTRIBUTING.md --- CONTRIBUTING.md | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 CONTRIBUTING.md diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md new file mode 100644 index 00000000..d76251d4 --- /dev/null +++ b/CONTRIBUTING.md @@ -0,0 +1,20 @@ +# Contribute to Spotlight + +Everyone is welcome to contribute, and we value everybody's contribution. Code +contributions are not the only way to help the community. +Reported bugs, suggested features, contributing design ideas, +or offering feedback are alse extremely valuable to us. + +Technical details on how to contribute can be found in our [documentation](https://renumics.com/docs/development). + +## Ways to contribute + +There are several ways you can contribute to Spotlight: + +* Fix outstanding issues. +* Implement new features. +* Submit issues related to bugs or desired new features. +* Share your use case + +If you don't know where to start, you might want to have a look at [hacktoberfest issues]() +and our guide on how to create a [new Lens](https://renumics.com/docs/development/lenses) From 2970bb91f61712b7801e0b8ef747bf08f6bccaa7 Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky <30174043+steffenslavetinsky@users.noreply.github.com> Date: Thu, 19 Oct 2023 13:40:26 +0200 Subject: [PATCH 16/39] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 54703128..1f324915 100644 --- a/README.md +++ b/README.md @@ -158,6 +158,6 @@ We have added crash report and perfomance collection. We do NOT collect user dat We are currently participating in the running [Hacktoberfest 2023](https://hacktoberfest.com/). -If you would like to contribute to Spotlight, the easiest way is to have a look at our [Contribution Docs](https://renumics.com/docs/development) and the [CONTRIBUTION.md](./CONTRIBUTION.md). +If you would like to contribute to Spotlight, the easiest way is to have a look at our [Contribution Docs](https://renumics.com/docs/development) and the [CONTRIBUTING.md](./CONTRIBUTING.md). We are also equally happy about non-code contributions -- whether it's reporting bugs, suggesting features, contributing design ideas, or offering feedback, every non-code contribution is highly valued and helps make our project better for everyone. From 4da5d77c41fca16867a9108171f64ddf488d8e11 Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky <30174043+steffenslavetinsky@users.noreply.github.com> Date: Thu, 19 Oct 2023 14:03:47 +0200 Subject: [PATCH 17/39] Update CONTRIBUTING.md --- CONTRIBUTING.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index d76251d4..f0b7fd73 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -16,5 +16,5 @@ There are several ways you can contribute to Spotlight: * Submit issues related to bugs or desired new features. * Share your use case -If you don't know where to start, you might want to have a look at [hacktoberfest issues]() +If you don't know where to start, you might want to have a look at [hacktoberfest issues](https://github.com/Renumics/spotlight/issues?q=is%3Aissue+is%3Aopen+label%3Ahacktoberfest) and our guide on how to create a [new Lens](https://renumics.com/docs/development/lenses) From dff73757b123bb841cdf4c51da3270d59d86a885 Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky <30174043+steffenslavetinsky@users.noreply.github.com> Date: Thu, 19 Oct 2023 14:05:35 +0200 Subject: [PATCH 18/39] Update CONTRIBUTING.md --- CONTRIBUTING.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index f0b7fd73..d6628c4f 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -17,4 +17,4 @@ There are several ways you can contribute to Spotlight: * Share your use case If you don't know where to start, you might want to have a look at [hacktoberfest issues](https://github.com/Renumics/spotlight/issues?q=is%3Aissue+is%3Aopen+label%3Ahacktoberfest) -and our guide on how to create a [new Lens](https://renumics.com/docs/development/lenses) +and our guide on how to create a [new Lens](https://renumics.com/docs/development/lenses). From 4301d92aa8ac825b28a609f685458beed3fcf426 Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky Date: Thu, 19 Oct 2023 16:43:13 +0200 Subject: [PATCH 19/39] remove unnecessary padding on settings icon --- src/lenses/SequenceLens/MenuBar.tsx | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/lenses/SequenceLens/MenuBar.tsx b/src/lenses/SequenceLens/MenuBar.tsx index 1ed4dbbe..b2bb542d 100644 --- a/src/lenses/SequenceLens/MenuBar.tsx +++ b/src/lenses/SequenceLens/MenuBar.tsx @@ -53,7 +53,7 @@ const MenuBar: FunctionComponent = ({ return (
- +
From da7bb398dd547906f55604b3ad79428fd45fa2bc Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky Date: Thu, 19 Oct 2023 18:06:46 +0200 Subject: [PATCH 20/39] add the ability to select windows and sequences to be displayed in sequence lense --- src/components/LineChart/LineChart.tsx | 173 ++++++++++++++----------- src/lenses/SequenceLens/index.tsx | 52 +++++++- 2 files changed, 144 insertions(+), 81 deletions(-) diff --git a/src/components/LineChart/LineChart.tsx b/src/components/LineChart/LineChart.tsx index 2a636379..ded2520d 100644 --- a/src/components/LineChart/LineChart.tsx +++ b/src/components/LineChart/LineChart.tsx @@ -18,10 +18,18 @@ import { largestTriangleThreeBuckets } from '../../math/downsampling'; const Info = tw.div`flex w-full h-full justify-center items-center text-gray-500 italic text-xs text-center`; +const LineChartStyleWrapper = styled.div` + ${tw`w-full h-full`} + g.highlighted-region path { + ${tw`fill-blue-500 stroke-0 opacity-30 hover:opacity-50`} + } +`; + type Domain = [number, number]; export type Series = { name: string; values: Vec2[]; xLabel?: string; yLabel?: string }; export type LineChartProps = { chartData: Series[]; + highlightedRegions?: [number, number][]; multipleYScales?: boolean; chartColors?: string[]; xExtents?: Vec2; @@ -127,6 +135,7 @@ const LineChart: React.ForwardRefRenderFunction = ( onChangeXExtents, syncKey, yDomains = DEFAULT_Y_DOMAINS, + highlightedRegions = [], }, ref ) => { @@ -267,90 +276,100 @@ const LineChart: React.ForwardRefRenderFunction = ( ); } return ( - - - - } - /> - - - {multipleYScales ? ( - data.map((_d, index) => ( + + + + + } + /> + + + {multipleYScales ? ( + data.map((_d, index) => ( + + )) + ) : ( + )} + {data.map(({ name, values }, index) => ( + - )) - ) : ( - - )} - {data.map(({ name, values }, index) => ( - - ))} - {refAreaLeft && refAreaRight && ( - - )} - - + ))} + {refAreaLeft && refAreaRight && ( + + )} + {highlightedRegions?.map(([start, end], index) => ( + + ))} + + + ); }; diff --git a/src/lenses/SequenceLens/index.tsx b/src/lenses/SequenceLens/index.tsx index 1cecbbe8..930b9d31 100644 --- a/src/lenses/SequenceLens/index.tsx +++ b/src/lenses/SequenceLens/index.tsx @@ -3,7 +3,8 @@ import _ from 'lodash'; import { useCallback, useMemo, useRef, useState } from 'react'; import { useColors } from '../../stores/colors'; import tw, { styled } from 'twin.macro'; -import type { Sequence1DColumn, Vec2, Lens } from '../../types'; +import type { Lens, Sequence1DColumn, Vec2 } from '../../types'; +import { isSequence1DColumn } from '../../types'; import useSetting from '../useSetting'; import MenuBar from './MenuBar'; @@ -17,9 +18,19 @@ const ViewerWrapper = styled.div` const Info = tw.div`flex w-full h-full justify-center items-center text-gray-500 italic text-xs text-center`; const SequenceView: Lens = ({ values, columns, syncKey }) => { + const [sequences, window] = useMemo( + () => [ + values.filter((value, index) => isSequence1DColumn(columns[index])), + values.find((value, index) => columns[index].type.kind === 'Window') as + | [number, number] + | undefined, + ], + [values, columns] + ); + const chartData = useMemo(() => { const decoder = new TextDecoder(); - return values + return sequences .filter((v) => v !== null) .map((buffer, i) => { const column = columns[i] as Sequence1DColumn; @@ -34,7 +45,7 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { name: column.name, }; }); - }, [values, columns]); + }, [sequences, columns]); const chartRef = useRef(null); const [localXExtents, setLocalXExtents] = useState([-Infinity, Infinity]); @@ -159,6 +170,15 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { [isXSynchronized, xExtents, localXExtents] ); + const clampedWindow = useMemo(() => { + if (!window) return undefined; + const [start, end] = window; + return [ + Math.max(start, displayedXExtents[0]), + Math.min(end, displayedXExtents[1]), + ] as [number, number]; + }, [displayedXExtents, window]); + const resetPlot = useCallback(() => { if (chartRef.current) { chartRef.current.reset(); @@ -178,6 +198,7 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { onChangeXExtents={setLocalAndGlobalXAxisExtents} syncKey={syncKey} yDomains={yDomains} + highlightedRegions={clampedWindow ? [clampedWindow] : []} /> ) : ( @@ -207,10 +228,33 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { }; SequenceView.key = 'SequenceView'; -SequenceView.dataTypes = ['Sequence1D']; +SequenceView.dataTypes = ['Sequence1D', 'Window']; SequenceView.multi = true; SequenceView.defaultHeight = 192; SequenceView.displayName = 'Lineplot'; SequenceView.minHeight = 45; +SequenceView.multi = true; +SequenceView.filterAllowedColumns = (allColumns, selectedColumns) => { + const sequenceColumnsCount = selectedColumns.filter( + (col) => col.type.kind === 'Sequence1D' + ).length; + const windowColumnsCount = selectedColumns.filter( + (col) => col.type.kind === 'Window' + ).length; + + console.log({ sequenceColumnsCount, windowColumnsCount }); + + // only allow adding a window column if there is only one sequence column + // if a windowColumn is already selected only allow one sequence column to be added + if (sequenceColumnsCount > 1 || windowColumnsCount > 0) + return allColumns.filter((col) => col.type.kind === 'Sequence1D'); + + if (sequenceColumnsCount === 1 && windowColumnsCount === 1) return []; + + return allColumns.filter((col) => ['Sequence1D', 'Window'].includes(col.type.kind)); +}; +SequenceView.isSatisfied = (columns) => { + return columns.some((col) => isSequence1DColumn(col)); +}; export default SequenceView; From 286c509e157fc1cad3c130e3546f2cac2e53e2d0 Mon Sep 17 00:00:00 2001 From: Steffen Slavetinsky Date: Fri, 20 Oct 2023 09:04:52 +0200 Subject: [PATCH 21/39] allow more than 1 sequence column when a window column is selected --- src/lenses/SequenceLens/index.tsx | 30 ++++++++++-------------------- 1 file changed, 10 insertions(+), 20 deletions(-) diff --git a/src/lenses/SequenceLens/index.tsx b/src/lenses/SequenceLens/index.tsx index 930b9d31..b82aca20 100644 --- a/src/lenses/SequenceLens/index.tsx +++ b/src/lenses/SequenceLens/index.tsx @@ -170,13 +170,15 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { [isXSynchronized, xExtents, localXExtents] ); - const clampedWindow = useMemo(() => { - if (!window) return undefined; + const clampedWindows = useMemo(() => { + if (!window) return []; const [start, end] = window; return [ - Math.max(start, displayedXExtents[0]), - Math.min(end, displayedXExtents[1]), - ] as [number, number]; + [ + Math.max(start, displayedXExtents[0]), + Math.min(end, displayedXExtents[1]), + ], + ] as [number, number][]; }, [displayedXExtents, window]); const resetPlot = useCallback(() => { @@ -198,7 +200,7 @@ const SequenceView: Lens = ({ values, columns, syncKey }) => { onChangeXExtents={setLocalAndGlobalXAxisExtents} syncKey={syncKey} yDomains={yDomains} - highlightedRegions={clampedWindow ? [clampedWindow] : []} + highlightedRegions={clampedWindows} /> ) : ( @@ -235,22 +237,10 @@ SequenceView.displayName = 'Lineplot'; SequenceView.minHeight = 45; SequenceView.multi = true; SequenceView.filterAllowedColumns = (allColumns, selectedColumns) => { - const sequenceColumnsCount = selectedColumns.filter( - (col) => col.type.kind === 'Sequence1D' - ).length; - const windowColumnsCount = selectedColumns.filter( - (col) => col.type.kind === 'Window' - ).length; - - console.log({ sequenceColumnsCount, windowColumnsCount }); - - // only allow adding a window column if there is only one sequence column - // if a windowColumn is already selected only allow one sequence column to be added - if (sequenceColumnsCount > 1 || windowColumnsCount > 0) + // allow max 1 window column + if (selectedColumns.some((col) => col.type.kind === 'Window')) return allColumns.filter((col) => col.type.kind === 'Sequence1D'); - if (sequenceColumnsCount === 1 && windowColumnsCount === 1) return []; - return allColumns.filter((col) => ['Sequence1D', 'Window'].includes(col.type.kind)); }; SequenceView.isSatisfied = (columns) => { From 215d7879450cda09dc7ea09c730ab04a3ca5ce79 Mon Sep 17 00:00:00 2001 From: Aman Prakash Date: Fri, 20 Oct 2023 12:46:43 +0530 Subject: [PATCH 22/39] Update README.md Fixed a little typo --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 1f324915..6c68d669 100644 --- a/README.md +++ b/README.md @@ -140,7 +140,7 @@ Here, the data types are discovered automatically from the dataset and we use a #### Usage Tracking -We have added crash report and perfomance collection. We do NOT collect user data other than an anonymized Machine Id obtained by py-machineid, and only log our own actions. We do NOT collect folder names, dataset names, or row data of any kind only aggregate performance statistics like total time of a table_load, crash data, etc. Collecting Spotlight crashes will help us improve stability. To opt out of the crash report collection define an environment variable called `SPOTLIGHT_OPT_OUT` and set it to true. e.G.`export SPOTLIGHT_OPT_OUT=true` +We have added crash report and performance collection. We do NOT collect user data other than an anonymized Machine Id obtained by py-machineid, and only log our own actions. We do NOT collect folder names, dataset names, or row data of any kind only aggregate performance statistics like total time of a table_load, crash data, etc. Collecting Spotlight crashes will help us improve stability. To opt out of the crash report collection define an environment variable called `SPOTLIGHT_OPT_OUT` and set it to true. e.G.`export SPOTLIGHT_OPT_OUT=true` ## We are very happy to hear your feedback From de0eaa5319df5b4b416cbcf56c7bac4aed9f9ad7 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Fri, 20 Oct 2023 11:20:00 +0200 Subject: [PATCH 23/39] Also run CI workflow on `pull_request` event --- .github/workflows/ci.yml | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 92b14aa9..b7297a8b 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -1,6 +1,8 @@ name: CI -on: push +on: + - push + - pull_request # As long as we use local actions, checkout should be made in workflow before # and not in the local actions. Otherwise, no action file found. From 85072a0f3f9ad76acaa7918f10ef74a94c364fd0 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Fri, 20 Oct 2023 11:57:40 +0200 Subject: [PATCH 24/39] Fix autogenerated elements for UI tests --- .gitignore | 2 +- tests/ui/_autogenerated_ui_elements.py | 21 --------------------- tests/ui/generate_ui_test_elements.py | 2 +- 3 files changed, 2 insertions(+), 23 deletions(-) delete mode 100644 tests/ui/_autogenerated_ui_elements.py diff --git a/.gitignore b/.gitignore index f71727d9..6e091a69 100644 --- a/.gitignore +++ b/.gitignore @@ -44,7 +44,7 @@ __pycache__/ # testing /coverage geckodriver.log -/ui_tests/_autogenerated_ui_elements.py +/tests/ui/_autogenerated_ui_elements.py # misc .DS_Store diff --git a/tests/ui/_autogenerated_ui_elements.py b/tests/ui/_autogenerated_ui_elements.py deleted file mode 100644 index 5a6b37c5..00000000 --- a/tests/ui/_autogenerated_ui_elements.py +++ /dev/null @@ -1,21 +0,0 @@ -"""AUTO GENERATED BY generate_ui_test_elements.py""" - - -class DataTestTags: # pylint: disable=too-few-public-methods - """list of all tags found in src/*.ts*""" - - DATAGRID = "datagrid" - DATAGRID_ADD_COLUMN_BUTTON = "datagrid-add-column-button" - DATAGRID_ALL_COUNT = "datagrid-all-count" - DATAGRID_ALL_TAB_BUTTON = "datagrid-all-tab-button" - DATAGRID_FILTERED_COUNT = "datagrid-filtered-count" - DATAGRID_FILTERED_TAB_BUTTON = "datagrid-filtered-tab-button" - DATAGRID_SELECTED_COUNT = "datagrid-selected-count" - DATAGRID_SELECTED_TAB_BUTTON = "datagrid-selected-tab-button" - DATAGRID_SETTINGS_DROPDOWN = "datagrid-settings-dropdown" - GLOBAL_LOADING_INDICATOR = "global-loading-indicator" - HELP_BUTTON = "help-button" - MESHVIEW_SETTINGS_DROPDOWN = "meshview-settings-dropdown" - SEQUENCEVIEW_SETTINGS_DROPDOWN = "sequenceview-settings-dropdown" - SIMILARITYMAP = "similaritymap" - SIMILARITYMAP_SETTINGS_DROPDOWN = "similaritymap-settings-dropdown" diff --git a/tests/ui/generate_ui_test_elements.py b/tests/ui/generate_ui_test_elements.py index dee66cc4..df5021e9 100644 --- a/tests/ui/generate_ui_test_elements.py +++ b/tests/ui/generate_ui_test_elements.py @@ -22,7 +22,7 @@ def generate_ui_test_elements_py() -> None: """Get tagged elements and create a python file containing all tags as constants""" data_tags = get_data_tags_from_src("src/") with open( - "ui_tests/_autogenerated_ui_elements.py", "w", encoding="utf-8" + "tests/ui/_autogenerated_ui_elements.py", "w", encoding="utf-8" ) as tagged_src: tagged_src.write(f'"""AUTO GENERATED BY {Path(__file__).name}"""\n\n\n') From 3f9d0f0b4b90a92132a193ad12b0a79ab0913375 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Fri, 20 Oct 2023 12:10:52 +0200 Subject: [PATCH 25/39] Ignore autogenerated UI elements module in typecheck --- pyproject.toml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 8a676485..5fcbbaaf 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -174,7 +174,8 @@ module = [ "machineid", "filetype", "datasets", - "diffimg" + "diffimg", + "tests.ui._autogenerated_ui_elements" ] ignore_missing_imports = true From d7e1b14138f79ff815c534363eb09037e00d2706 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Fri, 20 Oct 2023 14:31:51 +0200 Subject: [PATCH 26/39] Do not start CI jobs/steps which use secrets ehn repository owner isnt Renumics --- .github/workflows/ci.yml | 10 ++++++---- .github/workflows/pr.yml | 1 + 2 files changed, 7 insertions(+), 4 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index b7297a8b..ab3056f4 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -336,9 +336,11 @@ jobs: fi - name: '📸 Upload GUI screenshots' if: | - success() - || steps.setup-chromedriver.outcome == 'success' - || steps.setup-geckodriver.outcome == 'success' + ( + success() + || steps.setup-chromedriver.outcome == 'success' + || steps.setup-geckodriver.outcome == 'success' + ) && github.repository_owner == 'Renumics' uses: LanceMcCarthy/Action-AzureBlobUpload@v2 with: connection_string: ${{ secrets.AZURE_CONNECTION_STRING }} @@ -424,7 +426,7 @@ jobs: # Release stage release: name: '🚀 Release Spotlight' - if: startsWith(github.ref, 'refs/tags/v') + if: startsWith(github.ref, 'refs/tags/v') && github.repository_owner == 'Renumics' needs: - prepare-python - prepare-node diff --git a/.github/workflows/pr.yml b/.github/workflows/pr.yml index 5f153c99..45a5776b 100644 --- a/.github/workflows/pr.yml +++ b/.github/workflows/pr.yml @@ -6,6 +6,7 @@ jobs: # Comment comment-gui-screenshots: name: '🖍 Comment GUI screenshots' + if: github.repository_owner == 'Renumics' permissions: pull-requests: write runs-on: ubuntu-latest From 93a4b53de9e3e91b3b39ba032c08232aa609073e Mon Sep 17 00:00:00 2001 From: Akash Pambhar Date: Sat, 21 Oct 2023 22:17:45 +0530 Subject: [PATCH 27/39] correct F1 metric --- src/widgets/MetricsWidget/metrics.ts | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/widgets/MetricsWidget/metrics.ts b/src/widgets/MetricsWidget/metrics.ts index 6d9d6899..69d70e50 100644 --- a/src/widgets/MetricsWidget/metrics.ts +++ b/src/widgets/MetricsWidget/metrics.ts @@ -69,7 +69,7 @@ export const METRICS: Record = { assignedValues as boolean[] ); - return (2 * tp) / (2 * tp + 2 * fp + fn); + return (2 * tp) / (2 * tp + fp + fn); }, }, MCC: { From b50d7e7ccd4d41f7f67169034b91aea0bd82809d Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 08:32:27 +0200 Subject: [PATCH 28/39] Debug some variables in CI --- .github/workflows/ci.yml | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index ab3056f4..cdbf9826 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -11,6 +11,12 @@ on: # `MATRIX` environment variable is set by the local `generate-matrix` action. jobs: + debug: + runs-on: ubuntu-latest + steps: + - run: echo ${{ github.repository_owner }} + - run: echo ${{ github.event.pull_request.head.repo.full_name }} + - run: echo ${{ github.event }} # Prepare stage prepare-python: name: '🐍 Prepare Python' From d8b253491dd5bd84afd3a0958138c94f21c25066 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 08:39:34 +0200 Subject: [PATCH 29/39] Check if head repo of PR is base repo --- .github/workflows/ci.yml | 6 ++++-- .github/workflows/pr.yml | 2 +- 2 files changed, 5 insertions(+), 3 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index cdbf9826..a5188c7f 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -16,7 +16,8 @@ jobs: steps: - run: echo ${{ github.repository_owner }} - run: echo ${{ github.event.pull_request.head.repo.full_name }} - - run: echo ${{ github.event }} + - run: echo ${{ github.event.pull_request.head.repo.full_name == github.repository }} + - run: echo ${{ github.event }} | jq -r # Prepare stage prepare-python: name: '🐍 Prepare Python' @@ -346,7 +347,8 @@ jobs: success() || steps.setup-chromedriver.outcome == 'success' || steps.setup-geckodriver.outcome == 'success' - ) && github.repository_owner == 'Renumics' + ) && github.event_name == 'pull_request' + && github.event.pull_request.head.repo.full_name == github.repository uses: LanceMcCarthy/Action-AzureBlobUpload@v2 with: connection_string: ${{ secrets.AZURE_CONNECTION_STRING }} diff --git a/.github/workflows/pr.yml b/.github/workflows/pr.yml index 45a5776b..7a300f32 100644 --- a/.github/workflows/pr.yml +++ b/.github/workflows/pr.yml @@ -6,7 +6,7 @@ jobs: # Comment comment-gui-screenshots: name: '🖍 Comment GUI screenshots' - if: github.repository_owner == 'Renumics' + if: github.event.pull_request.head.repo.full_name == github.repository permissions: pull-requests: write runs-on: ubuntu-latest From 75b9bb9c0c6f702bdfaa73bf78dee37a181488e5 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 09:00:12 +0200 Subject: [PATCH 30/39] Remove broken debug --- .github/workflows/ci.yml | 1 - 1 file changed, 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index a5188c7f..dd81b2f5 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -17,7 +17,6 @@ jobs: - run: echo ${{ github.repository_owner }} - run: echo ${{ github.event.pull_request.head.repo.full_name }} - run: echo ${{ github.event.pull_request.head.repo.full_name == github.repository }} - - run: echo ${{ github.event }} | jq -r # Prepare stage prepare-python: name: '🐍 Prepare Python' From 7bee8420b16e01369bf6ad0fa0178e0130f8ddbd Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 09:06:50 +0200 Subject: [PATCH 31/39] Remove debugs in CI --- .github/workflows/ci.yml | 6 ------ 1 file changed, 6 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index dd81b2f5..ebbd405a 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -11,12 +11,6 @@ on: # `MATRIX` environment variable is set by the local `generate-matrix` action. jobs: - debug: - runs-on: ubuntu-latest - steps: - - run: echo ${{ github.repository_owner }} - - run: echo ${{ github.event.pull_request.head.repo.full_name }} - - run: echo ${{ github.event.pull_request.head.repo.full_name == github.repository }} # Prepare stage prepare-python: name: '🐍 Prepare Python' From bd7c5a4d4ed010508dee6cef059cf730663422cf Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 09:42:24 +0200 Subject: [PATCH 32/39] Upload screenshots for push to or PR from Renumics/spotlight --- .github/workflows/ci.yml | 13 ++++++++++--- 1 file changed, 10 insertions(+), 3 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index ebbd405a..04b32d53 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -288,7 +288,7 @@ jobs: with: name: datasets-${{ needs.prepare-python.outputs.version }} path: build/datasets/ - - name: '📤 Restore pro frontend' + - name: '📤 Restore frontend' uses: actions/download-artifact@v3 with: name: .frontend-${{ needs.prepare-python.outputs.version }} @@ -340,8 +340,15 @@ jobs: success() || steps.setup-chromedriver.outcome == 'success' || steps.setup-geckodriver.outcome == 'success' - ) && github.event_name == 'pull_request' - && github.event.pull_request.head.repo.full_name == github.repository + ) && ( + ( + github.event_name == 'push' + && github.repository == 'Renumics/spotlight' + ) || ( + github.event_name == 'pull_request' + && github.event.pull_request.head.repo.full_name == github.repository + ) + ) uses: LanceMcCarthy/Action-AzureBlobUpload@v2 with: connection_string: ${{ secrets.AZURE_CONNECTION_STRING }} From 33e287876b09e4623d5fc5a1641f6f35dfda1be5 Mon Sep 17 00:00:00 2001 From: Alexander Druz Date: Mon, 23 Oct 2023 10:47:56 +0200 Subject: [PATCH 33/39] Only use secrets if on Renumics/spotlight --- .github/workflows/ci.yml | 2 +- .github/workflows/pr.yml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 04b32d53..8caa177d 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -346,7 +346,7 @@ jobs: && github.repository == 'Renumics/spotlight' ) || ( github.event_name == 'pull_request' - && github.event.pull_request.head.repo.full_name == github.repository + && github.event.pull_request.head.repo.full_name == 'Renumics/spotlight' ) ) uses: LanceMcCarthy/Action-AzureBlobUpload@v2 diff --git a/.github/workflows/pr.yml b/.github/workflows/pr.yml index 7a300f32..378ca9fb 100644 --- a/.github/workflows/pr.yml +++ b/.github/workflows/pr.yml @@ -6,7 +6,7 @@ jobs: # Comment comment-gui-screenshots: name: '🖍 Comment GUI screenshots' - if: github.event.pull_request.head.repo.full_name == github.repository + if: github.event.pull_request.head.repo.full_name == 'Renumics/spotlight' permissions: pull-requests: write runs-on: ubuntu-latest From 116c8ffb9e52699d4575d0b2922f2338106f6c1c Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 13:07:41 +0200 Subject: [PATCH 34/39] fix: cant run ui tests locally --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index 1568bab8..3eccbc57 100644 --- a/Makefile +++ b/Makefile @@ -141,7 +141,7 @@ ui-test-%: } trap teardown EXIT PORT="5005" - poetry run spotlight --host 127.0.0.1 --port $$PORT --no-browser . & + poetry run spotlight --host 127.0.0.1 --port $$PORT --no-browser --folder . & export BACKEND_BASE_URL="http://127.0.0.1:$${PORT}" export FRONTEND_BASE_URL="http://127.0.0.1:$${PORT}" wget -q -t20 -w0.5 --retry-connrefused --delete-after "$$BACKEND_BASE_URL" From ea88157ef9afc2505ac2941e703173920c27d277 Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 13:34:52 +0200 Subject: [PATCH 35/39] Revert "Update pnpm env" This reverts commit d4ef59fc327449451854279f7bc1ab5d73c9ada1. --- package.json | 7 ++- pnpm-lock.yaml | 159 +++++++++++++------------------------------------ 2 files changed, 47 insertions(+), 119 deletions(-) diff --git a/package.json b/package.json index 88e8f3a9..6625d7fe 100644 --- a/package.json +++ b/package.json @@ -99,7 +99,7 @@ "@types/jest": "^29.4.0", "@types/lodash": "^4.14.191", "@types/node": "^18.14.1", - "@types/node-fetch": "^2.1.0", + "@types/node-fetch": "2", "@types/react": "^18.0.27", "@types/react-beautiful-dnd": "^13.1.3", "@types/react-dom": "^18.0.10", @@ -210,5 +210,10 @@ ".jsx", ".tsx" ] + }, + "pnpm": { + "overrides": { + "@babel/traverse@<7.23.2": ">=7.23.2" + } } } diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index 9847ebd2..7a9b0057 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -1,5 +1,8 @@ lockfileVersion: '6.0' +overrides: + '@babel/traverse@<7.23.2': '>=7.23.2' + dependencies: '@floating-ui/react': specifier: ^0.19.2 @@ -24,7 +27,7 @@ dependencies: version: 3.0.2 '@uiw/react-json-view': specifier: 2.0.0-alpha.7 - version: 2.0.0-alpha.7(@babel/runtime@7.23.2)(react-dom@18.2.0)(react@18.2.0) + version: 2.0.0-alpha.7(@babel/runtime@7.22.6)(react-dom@18.2.0)(react@18.2.0) chroma-js: specifier: ^2.4.2 version: 2.4.2 @@ -214,7 +217,7 @@ devDependencies: specifier: ^18.14.1 version: 18.14.1 '@types/node-fetch': - specifier: ^2.1.0 + specifier: '2' version: 2.1.0 '@types/react': specifier: ^18.0.27 @@ -334,13 +337,6 @@ packages: '@jridgewell/trace-mapping': 0.3.18 dev: true - /@babel/code-frame@7.22.13: - resolution: {integrity: sha512-XktuhWlJ5g+3TJXc5upd9Ks1HutSArik6jf2eAjYFyIOf4ej3RN+184cZbzDvbPnuTJIUhPKKJE3cIsYTiAT3w==} - engines: {node: '>=6.9.0'} - dependencies: - '@babel/highlight': 7.22.20 - chalk: 2.4.2 - /@babel/code-frame@7.22.5: resolution: {integrity: sha512-Xmwn266vad+6DAqEB2A6V/CcZVp62BbwVmcOJc2RPuwih1kw02TjQvWVWlcKGbBPd+8/0V5DEkOcizRGYsspYQ==} engines: {node: '>=6.9.0'} @@ -364,7 +360,7 @@ packages: '@babel/helpers': 7.22.6 '@babel/parser': 7.22.7 '@babel/template': 7.22.5 - '@babel/traverse': 7.23.2(supports-color@5.5.0) + '@babel/traverse': 7.22.8(supports-color@5.5.0) '@babel/types': 7.22.5 convert-source-map: 1.9.0 debug: 4.3.4(supports-color@5.5.0) @@ -383,16 +379,6 @@ packages: '@jridgewell/gen-mapping': 0.3.3 '@jridgewell/trace-mapping': 0.3.18 jsesc: 2.5.2 - 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'@babel/template': 7.22.15 - '@babel/types': 7.23.0 + '@babel/template': 7.22.5 + '@babel/types': 7.22.5 '@types/babel__core': 7.20.1 '@types/babel__traverse': 7.20.1 dev: true @@ -2995,7 +2922,7 @@ packages: normalize-path: 3.0.0 readdirp: 3.6.0 optionalDependencies: - fsevents: 2.3.3 + fsevents: 2.3.2 /chroma-js@2.4.2: resolution: {integrity: sha512-U9eDw6+wt7V8z5NncY2jJfZa+hUH8XEj8FQHgFJTrUFnJfXYf4Ml4adI2vXZOjqRDpFWtYVWypDfZwnJ+HIR4A==} @@ -4256,8 +4183,8 @@ packages: /fs.realpath@1.0.0: resolution: {integrity: sha512-OO0pH2lK6a0hZnAdau5ItzHPI6pUlvI7jMVnxUQRtw4owF2wk8lOSabtGDCTP4Ggrg2MbGnWO9X8K1t4+fGMDw==} - /fsevents@2.3.3: - resolution: {integrity: sha512-5xoDfX+fL7faATnagmWPpbFtwh/R77WmMMqqHGS65C3vvB0YHrgF+B1YmZ3441tMj5n63k0212XNoJwzlhffQw==} + /fsevents@2.3.2: + resolution: {integrity: sha512-xiqMQR4xAeHTuB9uWm+fFRcIOgKBMiOBP+eXiyT7jsgVCq1bkVygt00oASowB7EdtpOHaaPgKt812P9ab+DDKA==} engines: {node: ^8.16.0 || ^10.6.0 || >=11.0.0} os: [darwin] requiresBuild: true @@ -4773,7 +4700,7 @@ packages: engines: {node: '>=8'} dependencies: '@babel/core': 7.22.9 - '@babel/parser': 7.23.0 + '@babel/parser': 7.22.7 '@istanbuljs/schema': 0.1.3 istanbul-lib-coverage: 3.2.0 semver: 6.3.1 @@ -4985,7 +4912,7 @@ packages: micromatch: 4.0.5 walker: 1.0.8 optionalDependencies: - fsevents: 2.3.3 + fsevents: 2.3.2 dev: true /jest-leak-detector@29.6.2: @@ -6458,10 +6385,6 @@ packages: /regenerator-runtime@0.13.11: resolution: {integrity: sha512-kY1AZVr2Ra+t+piVaJ4gxaFaReZVH40AKNo7UCX6W+dEwBo/2oZJzqfuN1qLq1oL45o56cPaTXELwrTh8Fpggg==} - /regenerator-runtime@0.14.0: - resolution: {integrity: sha512-srw17NI0TUWHuGa5CFGGmhfNIeja30WMBfbslPNhf6JrqQlLN5gcrvig1oqPxiVaXb0oW0XRKtH6Nngs5lKCIA==} - dev: false - /regexp-to-ast@0.5.0: resolution: {integrity: sha512-tlbJqcMHnPKI9zSrystikWKwHkBqu2a/Sgw01h3zFjvYrMxEDYHzzoMZnUrbIfpTFEsoRnnviOXNCzFiSc54Qw==} dev: false @@ -6562,7 +6485,7 @@ packages: engines: {node: '>=14.18.0', npm: '>=8.0.0'} hasBin: true optionalDependencies: - fsevents: 2.3.3 + fsevents: 2.3.2 dev: true /run-parallel@1.2.0: @@ -6867,7 +6790,7 @@ packages: react-is: '>= 16.8.0' dependencies: '@babel/helper-module-imports': 7.22.5 - '@babel/traverse': 7.23.2(supports-color@5.5.0) + '@babel/traverse': 7.22.8(supports-color@5.5.0) '@emotion/is-prop-valid': 1.2.1 '@emotion/stylis': 0.8.5 '@emotion/unitless': 0.7.5 @@ -7451,7 +7374,7 @@ packages: postcss: 8.4.31 rollup: 3.27.2 optionalDependencies: - fsevents: 2.3.3 + fsevents: 2.3.2 dev: true /vm-browserify@1.1.2: From 6872c2d78d440e4ef06ea91ebfafc26bd0f09ee0 Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 13:36:08 +0200 Subject: [PATCH 36/39] Revert "fix pnpm deps" This reverts commit effce2d52736de3469fd35119dab903d99b1790b. --- Makefile | 2 +- package.json | 133 +- pnpm-lock.yaml | 3188 +++++++++++++++++++++++++----------------------- 3 files changed, 1736 insertions(+), 1587 deletions(-) diff --git a/Makefile b/Makefile index 3eccbc57..99edee62 100644 --- a/Makefile +++ b/Makefile @@ -28,7 +28,7 @@ clean: ## clean project audit: ## Audit project dependencies poetry export --without-hashes | poetry run safety check --full-report --stdin \ --ignore 61496 --ignore 51668 - pnpm audit --prod + pnpm audit --production .PHONY: check-format check-format: ## Check code formatting diff --git a/package.json b/package.json index 6625d7fe..5243c664 100644 --- a/package.json +++ b/package.json @@ -29,111 +29,111 @@ "dependencies": { "@floating-ui/react": "^0.19.2", "@react-hook/resize-observer": "^1.2.6", - "@react-three/drei": "^9.56.25", - "@react-three/fiber": "^8.11.2", - "@tailwindcss/typography": "^0.5.9", + "@react-three/drei": "^9.88.2", + "@react-three/fiber": "^8.14.5", + "@tailwindcss/typography": "^0.5.10", "@tippyjs/react": "^4.2.6", - "@types/dompurify": "^3.0.2", + "@types/dompurify": "^3.0.3", "@uiw/react-json-view": "2.0.0-alpha.7", "chroma-js": "^2.4.2", "comlink": "^4.4.1", - "cropperjs": "^1.5.13", - "d3": "^7.8.2", - "d3-array": "^3.2.2", + "cropperjs": "^1.6.1", + "d3": "^7.8.5", + "d3-array": "^3.2.4", "d3-axis": "^3.0.0", "d3-brush": "^3.0.0", - "d3-cloud": "^1.2.5", - "d3-delaunay": "^6.0.2", + "d3-cloud": "^1.2.7", + "d3-delaunay": "^6.0.4", "d3-format": "^3.1.0", "d3-scale": "^4.0.2", "d3-selection": "^3.0.0", "d3-shape": "^3.2.0", "d3-time-format": "^4.1.0", "d3-zoom": "^3.0.0", - "detect-gpu": "^5.0.12", - "dompurify": "^3.0.3", + "detect-gpu": "^5.0.37", + "dompurify": "^3.0.6", "file-saver": "^2.0.5", - "flexlayout-react": "^0.7.6", + "flexlayout-react": "^0.7.12", "fuse.js": "^6.6.2", - "immer": "^9.0.19", + "immer": "^9.0.21", "localforage": "^1.10.0", "lodash": "^4.17.21", "moment": "^2.29.4", - "numbro": "^2.3.6", + "numbro": "^2.4.0", "prop-types": "^15.8.1", "react": "^18.2.0", "react-beautiful-dnd": "^13.1.1", "react-cropper": "^2.3.3", "react-dom": "^18.2.0", "react-error-boundary": "^3.1.4", - "react-icons": "^4.10.1", + "react-icons": "^4.11.0", "react-is": "^18.2.0", - "react-joyride": "^2.5.3", - "react-player": "^2.11.2", - "react-select": "^5.7.0", - "react-slider": "^2.0.4", - "react-toastify": "^9.1.1", - "react-virtualized-auto-sizer": "^1.0.7", - "react-window": "^1.8.8", - "recharts": "^2.4.3", + "react-joyride": "^2.6.1", + "react-player": "^2.13.0", + "react-select": "^5.7.7", + "react-slider": "^2.0.6", + "react-toastify": "^9.1.3", + "react-virtualized-auto-sizer": "^1.0.20", + "react-window": "^1.8.9", + "recharts": "^2.9.0", "seedrandom": "^3.0.5", "shallowequal": "^1.1.0", "short-uuid": "^4.2.2", "showdown": "^2.1.0", "simple-statistics": "^7.8.3", - "styled-components": "^5.3.9", + "styled-components": "^5.3.11", "three": "^0.149.0", - "three-stdlib": "^2.21.8", + "three-stdlib": "^2.27.3", "tippy.js": "^6.3.7", "unique-names-generator": "^4.7.1", - "uuid": "^9.0.0", - "wavesurfer.js": "^6.4.0", - "zustand": "^4.3.3" + "uuid": "^9.0.1", + "wavesurfer.js": "^6.6.4", + "zustand": "^4.4.3" }, "devDependencies": { "@testing-library/react": "^14.0.0", - "@types/chroma-js": "^2.4.0", - "@types/d3": "^7.4.0", - "@types/d3-cloud": "^1.2.5", + "@types/chroma-js": "^2.4.1", + "@types/d3": "^7.4.1", + "@types/d3-cloud": "^1.2.6", "@types/file-saver": "^2.0.5", - "@types/jest": "^29.4.0", - "@types/lodash": "^4.14.191", - "@types/node": "^18.14.1", - "@types/node-fetch": "2", - "@types/react": "^18.0.27", - "@types/react-beautiful-dnd": "^13.1.3", - "@types/react-dom": "^18.0.10", - "@types/react-slider": "^1.3.1", + "@types/jest": "^29.5.5", + "@types/lodash": "^4.14.199", + "@types/node": "^18.18.5", + "@types/node-fetch": "^2.6.6", + "@types/react": "^18.2.28", + "@types/react-beautiful-dnd": "^13.1.5", + "@types/react-dom": "^18.2.13", + "@types/react-slider": "^1.3.2", "@types/react-virtualized-auto-sizer": "^1.0.1", - "@types/react-window": "^1.8.5", - "@types/seedrandom": "^3.0.5", - "@types/shallowequal": "^1.1.1", - "@types/showdown": "^2.0.1", - "@types/styled-components": "^5.1.26", + "@types/react-window": "^1.8.6", + "@types/seedrandom": "^3.0.6", + "@types/shallowequal": "^1.1.2", + "@types/showdown": "^2.0.2", + "@types/styled-components": "^5.1.28", "@types/three": "^0.149.0", - "@types/uuid": "^9.0.1", - "@types/wavesurfer.js": "^6.0.3", - "@typescript-eslint/eslint-plugin": "^5.53.0", - "@typescript-eslint/parser": "^5.53.0", - "@vitejs/plugin-react": "^4.0.4", + "@types/uuid": "^9.0.5", + "@types/wavesurfer.js": "^6.0.8", + "@typescript-eslint/eslint-plugin": "^5.62.0", + "@typescript-eslint/parser": "^5.62.0", + "@vitejs/plugin-react": "^4.1.0", "babel-plugin-macros": "^3.1.0", - "babel-plugin-styled-components": "^2.0.7", - "eslint": "^8.34.0", - "eslint-config-prettier": "^8.6.0", - "eslint-plugin-import": "^2.27.5", + "babel-plugin-styled-components": "^2.1.4", + "eslint": "^8.51.0", + "eslint-config-prettier": "^8.10.0", + "eslint-plugin-import": "^2.28.1", "eslint-plugin-jsx-a11y": "^6.7.1", - "eslint-plugin-react": "^7.32.2", + "eslint-plugin-react": "^7.33.2", "eslint-plugin-react-hooks": "^4.6.0", - "jest": "^29.4.3", - "node-fetch": "^2.6.9", - "prettier": "^2.7.1", - "tailwindcss": "^3.3.1", - "ts-jest": "^29.0.5", - "twin.macro": "^3.3.0", - "typescript": "^5.1.6", - "vite": "^4.4.9", - "vite-plugin-dts": "^3.5.2", - "vite-plugin-node-polyfills": "^0.14.0" + "jest": "^29.7.0", + "node-fetch": "^2.7.0", + "prettier": "^2.8.8", + "tailwindcss": "^3.3.3", + "ts-jest": "^29.1.1", + "twin.macro": "^3.4.0", + "typescript": "^5.2.2", + "vite": "^4.4.11", + "vite-plugin-dts": "^3.6.0", + "vite-plugin-node-polyfills": "^0.14.1" }, "babelMacros": { "twin": { @@ -210,10 +210,5 @@ ".jsx", ".tsx" ] - }, - "pnpm": { - "overrides": { - "@babel/traverse@<7.23.2": ">=7.23.2" - } } } diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index 7a9b0057..e45b33b4 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -1,8 +1,5 @@ lockfileVersion: '6.0' -overrides: - '@babel/traverse@<7.23.2': '>=7.23.2' - dependencies: '@floating-ui/react': specifier: ^0.19.2 @@ -11,23 +8,23 @@ dependencies: specifier: ^1.2.6 version: 1.2.6(react@18.2.0) '@react-three/drei': - specifier: ^9.56.25 - version: 9.56.25(@react-three/fiber@8.11.2)(@types/three@0.149.0)(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) + specifier: ^9.88.2 + version: 9.88.2(@react-three/fiber@8.14.5)(@types/three@0.149.0)(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) '@react-three/fiber': - specifier: ^8.11.2 - version: 8.11.2(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) + specifier: ^8.14.5 + version: 8.14.5(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) '@tailwindcss/typography': - specifier: ^0.5.9 - version: 0.5.9(tailwindcss@3.3.1) + specifier: ^0.5.10 + version: 0.5.10(tailwindcss@3.3.3) '@tippyjs/react': specifier: ^4.2.6 version: 4.2.6(react-dom@18.2.0)(react@18.2.0) '@types/dompurify': - specifier: ^3.0.2 - version: 3.0.2 + specifier: ^3.0.3 + version: 3.0.3 '@uiw/react-json-view': specifier: 2.0.0-alpha.7 - version: 2.0.0-alpha.7(@babel/runtime@7.22.6)(react-dom@18.2.0)(react@18.2.0) + version: 2.0.0-alpha.7(@babel/runtime@7.23.2)(react-dom@18.2.0)(react@18.2.0) chroma-js: specifier: ^2.4.2 version: 2.4.2 @@ -35,14 +32,14 @@ dependencies: specifier: ^4.4.1 version: 4.4.1 cropperjs: - specifier: ^1.5.13 - version: 1.5.13 + specifier: ^1.6.1 + version: 1.6.1 d3: - specifier: ^7.8.2 - version: 7.8.2 + specifier: ^7.8.5 + version: 7.8.5 d3-array: - specifier: ^3.2.2 - version: 3.2.2 + specifier: ^3.2.4 + version: 3.2.4 d3-axis: specifier: ^3.0.0 version: 3.0.0 @@ -50,11 +47,11 @@ dependencies: specifier: ^3.0.0 version: 3.0.0 d3-cloud: - specifier: ^1.2.5 - version: 1.2.5 + specifier: ^1.2.7 + version: 1.2.7 d3-delaunay: - specifier: ^6.0.2 - version: 6.0.2 + specifier: ^6.0.4 + version: 6.0.4 d3-format: specifier: ^3.1.0 version: 3.1.0 @@ -74,23 +71,23 @@ dependencies: specifier: ^3.0.0 version: 3.0.0 detect-gpu: - specifier: ^5.0.12 - version: 5.0.12 + specifier: ^5.0.37 + version: 5.0.37 dompurify: - specifier: ^3.0.3 - version: 3.0.3 + specifier: ^3.0.6 + version: 3.0.6 file-saver: specifier: ^2.0.5 version: 2.0.5 flexlayout-react: - specifier: ^0.7.6 - version: 0.7.6(react-dom@18.2.0)(react@18.2.0) + specifier: ^0.7.12 + version: 0.7.12(react-dom@18.2.0)(react@18.2.0) fuse.js: specifier: ^6.6.2 version: 6.6.2 immer: - specifier: ^9.0.19 - version: 9.0.19 + specifier: ^9.0.21 + version: 9.0.21 localforage: specifier: ^1.10.0 version: 1.10.0 @@ -101,8 +98,8 @@ dependencies: specifier: ^2.29.4 version: 2.29.4 numbro: - specifier: ^2.3.6 - version: 2.3.6 + specifier: ^2.4.0 + version: 2.4.0 prop-types: specifier: ^15.8.1 version: 15.8.1 @@ -122,35 +119,35 @@ dependencies: specifier: ^3.1.4 version: 3.1.4(react@18.2.0) react-icons: - specifier: ^4.10.1 - version: 4.10.1(react@18.2.0) + specifier: ^4.11.0 + version: 4.11.0(react@18.2.0) react-is: specifier: ^18.2.0 version: 18.2.0 react-joyride: - specifier: ^2.5.3 - version: 2.5.3(react-dom@18.2.0)(react@18.2.0) + specifier: ^2.6.1 + version: 2.6.1(@types/react@18.2.28)(react-dom@18.2.0)(react@18.2.0) react-player: - specifier: ^2.11.2 - version: 2.11.2(react@18.2.0) + specifier: ^2.13.0 + version: 2.13.0(react@18.2.0) react-select: - specifier: ^5.7.0 - version: 5.7.0(@types/react@18.0.27)(react-dom@18.2.0)(react@18.2.0) + specifier: ^5.7.7 + version: 5.7.7(@types/react@18.2.28)(react-dom@18.2.0)(react@18.2.0) react-slider: - specifier: ^2.0.4 - version: 2.0.4(react@18.2.0) + specifier: ^2.0.6 + version: 2.0.6(react@18.2.0) react-toastify: - specifier: ^9.1.1 - version: 9.1.1(react-dom@18.2.0)(react@18.2.0) + specifier: ^9.1.3 + version: 9.1.3(react-dom@18.2.0)(react@18.2.0) react-virtualized-auto-sizer: - specifier: ^1.0.7 - version: 1.0.7(react-dom@18.2.0)(react@18.2.0) + specifier: ^1.0.20 + version: 1.0.20(react-dom@18.2.0)(react@18.2.0) react-window: - specifier: ^1.8.8 - version: 1.8.8(react-dom@18.2.0)(react@18.2.0) + specifier: ^1.8.9 + version: 1.8.9(react-dom@18.2.0)(react@18.2.0) recharts: - specifier: ^2.4.3 - version: 2.4.3(prop-types@15.8.1)(react-dom@18.2.0)(react@18.2.0) + specifier: ^2.9.0 + version: 2.9.0(prop-types@15.8.1)(react-dom@18.2.0)(react@18.2.0) seedrandom: specifier: ^3.0.5 version: 3.0.5 @@ -167,14 +164,14 @@ dependencies: specifier: ^7.8.3 version: 7.8.3 styled-components: - specifier: ^5.3.9 - version: 5.3.9(react-dom@18.2.0)(react-is@18.2.0)(react@18.2.0) + specifier: ^5.3.11 + version: 5.3.11(@babel/core@7.23.2)(react-dom@18.2.0)(react-is@18.2.0)(react@18.2.0) three: specifier: ^0.149.0 version: 0.149.0 three-stdlib: - specifier: ^2.21.8 - version: 2.21.8(three@0.149.0) + specifier: ^2.27.3 + version: 2.27.3(three@0.149.0) tippy.js: specifier: ^6.3.7 version: 6.3.7 @@ -182,145 +179,145 @@ dependencies: specifier: ^4.7.1 version: 4.7.1 uuid: - specifier: ^9.0.0 - version: 9.0.0 + specifier: ^9.0.1 + version: 9.0.1 wavesurfer.js: - specifier: ^6.4.0 - version: 6.4.0 + specifier: ^6.6.4 + version: 6.6.4 zustand: - specifier: ^4.3.3 - version: 4.3.3(immer@9.0.19)(react@18.2.0) + specifier: ^4.4.3 + version: 4.4.3(@types/react@18.2.28)(immer@9.0.21)(react@18.2.0) devDependencies: '@testing-library/react': specifier: ^14.0.0 version: 14.0.0(react-dom@18.2.0)(react@18.2.0) '@types/chroma-js': - specifier: ^2.4.0 - version: 2.4.0 + specifier: ^2.4.1 + version: 2.4.1 '@types/d3': - specifier: ^7.4.0 - version: 7.4.0 + specifier: ^7.4.1 + version: 7.4.1 '@types/d3-cloud': - specifier: ^1.2.5 - version: 1.2.5 + specifier: ^1.2.6 + version: 1.2.6 '@types/file-saver': specifier: ^2.0.5 version: 2.0.5 '@types/jest': - 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resolution: {integrity: sha512-bSydNFQsF7AMvwWsRXD7cBIXaNs/KSjvzWLymq/UtKE36697sboX4EccSHFVxvgdBlI1frYPc/VMKJNB7DFeDQ==} + /vue-tsc@1.8.19(typescript@5.2.2): + resolution: {integrity: sha512-tacMQLQ0CXAfbhRycCL5sWIy1qujXaIEtP1hIQpzHWOUuICbtTj9gJyFf91PvzG5KCNIkA5Eg7k2Fmgt28l5DQ==} hasBin: true peerDependencies: typescript: '*' dependencies: - '@vue/language-core': 1.8.8(typescript@5.1.6) - '@vue/typescript': 1.8.8(typescript@5.1.6) + '@vue/language-core': 1.8.19(typescript@5.2.2) + '@vue/typescript': 1.8.19(typescript@5.2.2) semver: 7.5.4 - typescript: 5.1.6 + typescript: 5.2.2 dev: true /walker@1.0.8: @@ -7406,8 +7540,8 @@ packages: makeerror: 1.0.12 dev: true - /wavesurfer.js@6.4.0: - resolution: {integrity: sha512-+i9GkYdMTm998goOWvycWqCgxfbolnuGTPgrdGss7ZbQDuu+n6AHdnJwYnqxW8RZo5A2ck6ztzXbrXGuCi0m5g==} + /wavesurfer.js@6.6.4: + resolution: {integrity: sha512-nBbc0pD/3FdClxKUKL1UW2V9AJPL+JOjC8T6/YF9/FCAn4uo+H6Y8VBkXo9UJXIHoBewoc7iXj3tPeL0UCJhjA==} dev: false /webgl-constants@1.1.1: @@ -7439,6 +7573,24 @@ packages: is-symbol: 1.0.4 dev: true + /which-builtin-type@1.1.3: + resolution: {integrity: sha512-YmjsSMDBYsM1CaFiayOVT06+KJeXf0o5M/CAd4o1lTadFAtacTUM49zoYxr/oroopFDfhvN6iEcBxUyc3gvKmw==} + engines: {node: '>= 0.4'} + dependencies: + function.prototype.name: 1.1.6 + has-tostringtag: 1.0.0 + is-async-function: 2.0.0 + is-date-object: 1.0.5 + is-finalizationregistry: 1.0.2 + is-generator-function: 1.0.10 + is-regex: 1.1.4 + is-weakref: 1.0.2 + isarray: 2.0.5 + which-boxed-primitive: 1.0.2 + which-collection: 1.0.1 + which-typed-array: 1.1.11 + dev: true + /which-collection@1.0.1: resolution: {integrity: sha512-W8xeTUwaln8i3K/cY1nGXzdnVZlidBcagyNFtBdD5kxnb4TvGKR7FfSIS3mYpwWS1QUCutfKz8IY8RjftB0+1A==} dependencies: @@ -7465,7 +7617,6 @@ packages: hasBin: true dependencies: isexe: 2.0.0 - dev: true /wrap-ansi@7.0.0: resolution: {integrity: sha512-YVGIj2kamLSTxw6NsZjoBxfSwsn0ycdesmc4p+Q21c5zPuZ1pl+NfxVdxPtdHvmNVOQ6XSYG4AUtyt/Fi7D16Q==} @@ -7499,7 +7650,6 @@ packages: /yallist@3.1.1: resolution: {integrity: sha512-a4UGQaWPH59mOXUYnAG2ewncQS4i4F43Tv3JoAM+s2VDAmS9NsK8GpDMLrCHPksFT7h3K6TOoUNn2pb7RoXx4g==} - dev: true /yallist@4.0.0: resolution: {integrity: sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A==} @@ -7509,6 +7659,10 @@ packages: resolution: {integrity: sha512-r3vXyErRCYJ7wg28yvBY5VSoAF8ZvlcW9/BwUzEtUsjvX/DKs24dIkuwjtuprwJJHsbyUbLApepYTR1BN4uHrg==} engines: {node: '>= 6'} + /yaml@2.3.3: + resolution: {integrity: sha512-zw0VAJxgeZ6+++/su5AFoqBbZbrEakwu+X0M5HmcwUiBL7AzcuPKjj5we4xfQLp78LkEMpD0cOnUhmgOVy3KdQ==} + engines: {node: '>= 14'} + /yargs-parser@21.1.1: resolution: {integrity: sha512-tVpsJW7DdjecAiFpbIB1e3qxIQsE6NoPc5/eTdrbbIC4h0LVsWhnoa3g+m2HclBIujHzsxZ4VJVA+GUuc2/LBw==} engines: {node: '>=12'} @@ -7544,10 +7698,6 @@ packages: commander: 9.5.0 dev: true - /zstddec@0.0.2: - resolution: {integrity: sha512-DCo0oxvcvOTGP/f5FA6tz2Z6wF+FIcEApSTu0zV5sQgn9hoT5lZ9YRAKUraxt9oP7l4e8TnNdi8IZTCX6WCkwA==} - dev: false - /zustand@3.7.2(react@18.2.0): resolution: {integrity: sha512-PIJDIZKtokhof+9+60cpockVOq05sJzHCriyvaLBmEJixseQ1a5Kdov6fWZfWOu5SK9c+FhH1jU0tntLxRJYMA==} engines: {node: '>=12.7.0'} @@ -7560,19 +7710,23 @@ packages: react: 18.2.0 dev: false - /zustand@4.3.3(immer@9.0.19)(react@18.2.0): - resolution: {integrity: sha512-x2jXq8S0kfLGNwGh87nhRfEc2eZy37tSatpSoSIN+O6HIaBhgQHSONV/F9VNrNcBcKQu/E80K1DeHDYQC/zCrQ==} + /zustand@4.4.3(@types/react@18.2.28)(immer@9.0.21)(react@18.2.0): + resolution: {integrity: sha512-oRy+X3ZazZvLfmv6viIaQmtLOMeij1noakIsK/Y47PWYhT8glfXzQ4j0YcP5i0P0qI1A4rIB//SGROGyZhx91A==} engines: {node: '>=12.7.0'} peerDependencies: + '@types/react': '>=16.8' immer: '>=9.0' react: '>=16.8' peerDependenciesMeta: + '@types/react': + optional: true immer: optional: true react: optional: true dependencies: - immer: 9.0.19 + '@types/react': 18.2.28 + immer: 9.0.21 react: 18.2.0 use-sync-external-store: 1.2.0(react@18.2.0) dev: false From bc08a630c4e12400be323f3b7d48f34e9cda8c87 Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 13:37:58 +0200 Subject: [PATCH 37/39] run pnpm audi --prod in audit make target --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index 99edee62..3eccbc57 100644 --- a/Makefile +++ b/Makefile @@ -28,7 +28,7 @@ clean: ## clean project audit: ## Audit project dependencies poetry export --without-hashes | poetry run safety check --full-report --stdin \ --ignore 61496 --ignore 51668 - pnpm audit --production + pnpm audit --prod .PHONY: check-format check-format: ## Check code formatting From 10fd9cc7d6e1a031da1e847c58c79735003c9909 Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 14:42:59 +0200 Subject: [PATCH 38/39] fix: add missing styled import to LineChart --- package.json | 128 +- pnpm-lock.yaml | 3205 +++++++++++------------- src/components/LineChart/LineChart.tsx | 2 +- 3 files changed, 1589 insertions(+), 1746 deletions(-) diff --git a/package.json b/package.json index 5243c664..4abdd893 100644 --- a/package.json +++ b/package.json @@ -29,111 +29,111 @@ "dependencies": { "@floating-ui/react": "^0.19.2", "@react-hook/resize-observer": "^1.2.6", - "@react-three/drei": "^9.88.2", - "@react-three/fiber": "^8.14.5", - "@tailwindcss/typography": "^0.5.10", + "@react-three/drei": "^9.56.25", + "@react-three/fiber": "^8.11.2", + "@tailwindcss/typography": "^0.5.9", "@tippyjs/react": "^4.2.6", - "@types/dompurify": "^3.0.3", + "@types/dompurify": "^3.0.2", "@uiw/react-json-view": "2.0.0-alpha.7", "chroma-js": "^2.4.2", "comlink": "^4.4.1", - "cropperjs": "^1.6.1", - "d3": "^7.8.5", - "d3-array": "^3.2.4", + "cropperjs": "^1.5.13", + "d3": "^7.8.2", + "d3-array": "^3.2.2", "d3-axis": "^3.0.0", "d3-brush": "^3.0.0", - "d3-cloud": "^1.2.7", - "d3-delaunay": "^6.0.4", + "d3-cloud": "^1.2.5", + "d3-delaunay": "^6.0.2", "d3-format": "^3.1.0", "d3-scale": "^4.0.2", "d3-selection": "^3.0.0", "d3-shape": "^3.2.0", "d3-time-format": "^4.1.0", "d3-zoom": "^3.0.0", - "detect-gpu": "^5.0.37", - "dompurify": "^3.0.6", + "detect-gpu": "^5.0.12", + "dompurify": "^3.0.3", "file-saver": "^2.0.5", - "flexlayout-react": "^0.7.12", + "flexlayout-react": "^0.7.6", "fuse.js": "^6.6.2", - "immer": "^9.0.21", + "immer": "^9.0.19", "localforage": "^1.10.0", "lodash": "^4.17.21", "moment": "^2.29.4", - "numbro": "^2.4.0", + "numbro": "^2.3.6", "prop-types": "^15.8.1", "react": "^18.2.0", "react-beautiful-dnd": "^13.1.1", "react-cropper": "^2.3.3", "react-dom": "^18.2.0", "react-error-boundary": "^3.1.4", - "react-icons": "^4.11.0", + "react-icons": "^4.10.1", "react-is": "^18.2.0", - "react-joyride": "^2.6.1", - "react-player": "^2.13.0", - "react-select": "^5.7.7", - "react-slider": "^2.0.6", - "react-toastify": "^9.1.3", - "react-virtualized-auto-sizer": "^1.0.20", - "react-window": "^1.8.9", - "recharts": "^2.9.0", + "react-joyride": "^2.5.3", + "react-player": "^2.11.2", + "react-select": "^5.7.0", + "react-slider": "^2.0.4", + "react-toastify": "^9.1.1", + "react-virtualized-auto-sizer": "^1.0.7", + "react-window": "^1.8.8", + "recharts": "^2.4.3", "seedrandom": "^3.0.5", "shallowequal": "^1.1.0", "short-uuid": "^4.2.2", "showdown": "^2.1.0", "simple-statistics": "^7.8.3", - "styled-components": "^5.3.11", + "styled-components": "^5.3.9", "three": "^0.149.0", - "three-stdlib": "^2.27.3", + "three-stdlib": "^2.21.8", "tippy.js": "^6.3.7", "unique-names-generator": "^4.7.1", - "uuid": "^9.0.1", - "wavesurfer.js": "^6.6.4", - "zustand": "^4.4.3" + "uuid": "^9.0.0", + "wavesurfer.js": "^6.4.0", + "zustand": "^4.3.3" }, "devDependencies": { "@testing-library/react": "^14.0.0", - "@types/chroma-js": "^2.4.1", - "@types/d3": "^7.4.1", - "@types/d3-cloud": "^1.2.6", + "@types/chroma-js": "^2.4.0", + "@types/d3": "^7.4.0", + "@types/d3-cloud": "^1.2.5", "@types/file-saver": "^2.0.5", - "@types/jest": "^29.5.5", - "@types/lodash": "^4.14.199", - "@types/node": "^18.18.5", - "@types/node-fetch": "^2.6.6", - "@types/react": "^18.2.28", - "@types/react-beautiful-dnd": "^13.1.5", - "@types/react-dom": "^18.2.13", - "@types/react-slider": "^1.3.2", + "@types/jest": "^29.4.0", + "@types/lodash": "^4.14.191", + "@types/node": "^18.14.1", + "@types/node-fetch": "2", + "@types/react": "^18.0.27", + "@types/react-beautiful-dnd": "^13.1.3", + "@types/react-dom": "^18.0.10", + "@types/react-slider": "^1.3.1", "@types/react-virtualized-auto-sizer": "^1.0.1", - "@types/react-window": "^1.8.6", - "@types/seedrandom": "^3.0.6", - "@types/shallowequal": "^1.1.2", - "@types/showdown": "^2.0.2", - "@types/styled-components": "^5.1.28", + "@types/react-window": "^1.8.5", + "@types/seedrandom": "^3.0.5", + "@types/shallowequal": "^1.1.1", + "@types/showdown": "^2.0.1", + "@types/styled-components": "^5.1.26", "@types/three": "^0.149.0", - "@types/uuid": "^9.0.5", - "@types/wavesurfer.js": "^6.0.8", - "@typescript-eslint/eslint-plugin": "^5.62.0", - "@typescript-eslint/parser": "^5.62.0", - "@vitejs/plugin-react": "^4.1.0", + "@types/uuid": "^9.0.1", + "@types/wavesurfer.js": "^6.0.3", + "@typescript-eslint/eslint-plugin": "^5.53.0", + "@typescript-eslint/parser": "^5.53.0", + "@vitejs/plugin-react": "^4.0.4", "babel-plugin-macros": "^3.1.0", - "babel-plugin-styled-components": "^2.1.4", - "eslint": "^8.51.0", - "eslint-config-prettier": "^8.10.0", - "eslint-plugin-import": "^2.28.1", + "babel-plugin-styled-components": "^2.0.7", + "eslint": "^8.34.0", + "eslint-config-prettier": "^8.6.0", + "eslint-plugin-import": "^2.27.5", "eslint-plugin-jsx-a11y": "^6.7.1", - "eslint-plugin-react": "^7.33.2", + "eslint-plugin-react": "^7.32.2", "eslint-plugin-react-hooks": "^4.6.0", - "jest": "^29.7.0", - "node-fetch": "^2.7.0", - "prettier": "^2.8.8", - "tailwindcss": "^3.3.3", - "ts-jest": "^29.1.1", - "twin.macro": "^3.4.0", - "typescript": "^5.2.2", - "vite": "^4.4.11", - "vite-plugin-dts": "^3.6.0", - "vite-plugin-node-polyfills": "^0.14.1" + "jest": "^29.4.3", + "node-fetch": "^2.6.9", + "prettier": "^2.7.1", + "tailwindcss": "^3.3.1", + "ts-jest": "^29.0.5", + "twin.macro": "^3.3.0", + "typescript": "^5.1.6", + "vite": "^4.4.9", + "vite-plugin-dts": "^3.5.2", + "vite-plugin-node-polyfills": "^0.14.0" }, "babelMacros": { "twin": { diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index e45b33b4..9f23dea8 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -8,23 +8,23 @@ dependencies: specifier: ^1.2.6 version: 1.2.6(react@18.2.0) '@react-three/drei': - specifier: ^9.88.2 - version: 9.88.2(@react-three/fiber@8.14.5)(@types/three@0.149.0)(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) + specifier: ^9.56.25 + version: 9.56.25(@react-three/fiber@8.11.2)(@types/three@0.149.0)(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) '@react-three/fiber': - specifier: ^8.14.5 - version: 8.14.5(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) + specifier: ^8.11.2 + version: 8.11.2(react-dom@18.2.0)(react@18.2.0)(three@0.149.0) '@tailwindcss/typography': - specifier: ^0.5.10 - version: 0.5.10(tailwindcss@3.3.3) + specifier: ^0.5.9 + version: 0.5.9(tailwindcss@3.3.1) '@tippyjs/react': specifier: ^4.2.6 version: 4.2.6(react-dom@18.2.0)(react@18.2.0) '@types/dompurify': - specifier: ^3.0.3 - version: 3.0.3 + specifier: ^3.0.2 + version: 3.0.2 '@uiw/react-json-view': specifier: 2.0.0-alpha.7 - version: 2.0.0-alpha.7(@babel/runtime@7.23.2)(react-dom@18.2.0)(react@18.2.0) + version: 2.0.0-alpha.7(@babel/runtime@7.22.6)(react-dom@18.2.0)(react@18.2.0) chroma-js: specifier: ^2.4.2 version: 2.4.2 @@ -32,14 +32,14 @@ dependencies: specifier: ^4.4.1 version: 4.4.1 cropperjs: - specifier: ^1.6.1 - version: 1.6.1 + specifier: ^1.5.13 + version: 1.5.13 d3: - specifier: ^7.8.5 - version: 7.8.5 + specifier: ^7.8.2 + version: 7.8.2 d3-array: - specifier: ^3.2.4 - version: 3.2.4 + specifier: ^3.2.2 + version: 3.2.2 d3-axis: specifier: ^3.0.0 version: 3.0.0 @@ -47,11 +47,11 @@ dependencies: specifier: ^3.0.0 version: 3.0.0 d3-cloud: - specifier: ^1.2.7 - version: 1.2.7 + specifier: ^1.2.5 + version: 1.2.5 d3-delaunay: - specifier: ^6.0.4 - version: 6.0.4 + specifier: ^6.0.2 + version: 6.0.2 d3-format: specifier: ^3.1.0 version: 3.1.0 @@ -71,23 +71,23 @@ dependencies: specifier: ^3.0.0 version: 3.0.0 detect-gpu: - specifier: ^5.0.37 - version: 5.0.37 + specifier: ^5.0.12 + version: 5.0.12 dompurify: - specifier: ^3.0.6 - version: 3.0.6 + specifier: ^3.0.3 + version: 3.0.3 file-saver: specifier: ^2.0.5 version: 2.0.5 flexlayout-react: - specifier: ^0.7.12 - version: 0.7.12(react-dom@18.2.0)(react@18.2.0) + specifier: ^0.7.6 + version: 0.7.6(react-dom@18.2.0)(react@18.2.0) fuse.js: specifier: ^6.6.2 version: 6.6.2 immer: - specifier: ^9.0.21 - version: 9.0.21 + specifier: ^9.0.19 + version: 9.0.19 localforage: specifier: ^1.10.0 version: 1.10.0 @@ -98,8 +98,8 @@ dependencies: specifier: ^2.29.4 version: 2.29.4 numbro: - specifier: ^2.4.0 - version: 2.4.0 + specifier: ^2.3.6 + version: 2.3.6 prop-types: specifier: ^15.8.1 version: 15.8.1 @@ -119,35 +119,35 @@ dependencies: specifier: ^3.1.4 version: 3.1.4(react@18.2.0) react-icons: - specifier: ^4.11.0 - version: 4.11.0(react@18.2.0) + specifier: ^4.10.1 + version: 4.10.1(react@18.2.0) react-is: specifier: ^18.2.0 version: 18.2.0 react-joyride: - specifier: ^2.6.1 - version: 2.6.1(@types/react@18.2.28)(react-dom@18.2.0)(react@18.2.0) + specifier: ^2.5.3 + version: 2.5.3(react-dom@18.2.0)(react@18.2.0) react-player: - specifier: ^2.13.0 - version: 2.13.0(react@18.2.0) + specifier: ^2.11.2 + version: 2.11.2(react@18.2.0) react-select: - specifier: ^5.7.7 - version: 5.7.7(@types/react@18.2.28)(react-dom@18.2.0)(react@18.2.0) + specifier: ^5.7.0 + version: 5.7.0(@types/react@18.0.27)(react-dom@18.2.0)(react@18.2.0) react-slider: - specifier: ^2.0.6 - version: 2.0.6(react@18.2.0) + specifier: ^2.0.4 + version: 2.0.4(react@18.2.0) react-toastify: - specifier: ^9.1.3 - version: 9.1.3(react-dom@18.2.0)(react@18.2.0) + specifier: ^9.1.1 + version: 9.1.1(react-dom@18.2.0)(react@18.2.0) react-virtualized-auto-sizer: - specifier: ^1.0.20 - version: 1.0.20(react-dom@18.2.0)(react@18.2.0) + specifier: ^1.0.7 + version: 1.0.7(react-dom@18.2.0)(react@18.2.0) react-window: - 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version: 2.6.6 + specifier: '2' + version: 2.1.0 '@types/react': - specifier: ^18.2.28 - version: 18.2.28 + specifier: ^18.0.27 + version: 18.0.27 '@types/react-beautiful-dnd': - specifier: ^13.1.5 - version: 13.1.5 + specifier: ^13.1.3 + version: 13.1.3 '@types/react-dom': - specifier: ^18.2.13 - version: 18.2.13 + specifier: ^18.0.10 + version: 18.0.10 '@types/react-slider': - specifier: ^1.3.2 - version: 1.3.2 + specifier: ^1.3.1 + version: 1.3.1 '@types/react-virtualized-auto-sizer': specifier: ^1.0.1 version: 1.0.1 '@types/react-window': - specifier: ^1.8.6 - version: 1.8.6 + specifier: ^1.8.5 + version: 1.8.5 '@types/seedrandom': - specifier: ^3.0.6 - version: 3.0.6 + specifier: ^3.0.5 + version: 3.0.5 '@types/shallowequal': - specifier: ^1.1.2 - version: 1.1.2 + specifier: ^1.1.1 + version: 1.1.1 '@types/showdown': - specifier: ^2.0.2 - version: 2.0.2 + specifier: ^2.0.1 + version: 2.0.1 '@types/styled-components': - specifier: ^5.1.28 - version: 5.1.28 + specifier: ^5.1.26 + version: 5.1.26 '@types/three': specifier: ^0.149.0 version: 0.149.0 '@types/uuid': - 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d3-array: 3.2.4 + d3-array: 3.2.2 d3-ease: 3.0.1 d3-interpolate: 3.0.1 d3-scale: 4.0.2 @@ -7437,8 +7300,8 @@ packages: d3-timer: 3.0.1 dev: false - /vite-plugin-dts@3.6.0(@types/node@18.18.5)(typescript@5.2.2)(vite@4.4.11): - resolution: {integrity: sha512-doxhDRFJCZD2sGjIp4V800nm8Y19GvmwckjG5vYPuiqJ7OBjc9NlW1Vp9Gkyh2aXlUs1jTDRH/lxWfcsPLOQHg==} + /vite-plugin-dts@3.5.2(@types/node@18.14.1)(typescript@5.1.6)(vite@4.4.9): + resolution: {integrity: sha512-iKc851+jdHEoN1ifbOEsoMs+/Zg26PE1EyO2Jc+4apOWRoaeK2zRJnaStgUuJaVaEcAjTqWzpNgCAMq7iO6DWA==} engines: {node: ^14.18.0 || >=16.0.0} peerDependencies: typescript: '*' @@ -7447,36 +7310,36 @@ packages: vite: optional: true dependencies: - '@microsoft/api-extractor': 7.38.0(@types/node@18.18.5) - '@rollup/pluginutils': 5.0.5 - '@vue/language-core': 1.8.19(typescript@5.2.2) + '@microsoft/api-extractor': 7.36.3(@types/node@18.14.1) + '@rollup/pluginutils': 5.0.2 + '@vue/language-core': 1.8.8(typescript@5.1.6) debug: 4.3.4(supports-color@5.5.0) kolorist: 1.8.0 - 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resolution: {integrity: sha512-nBbc0pD/3FdClxKUKL1UW2V9AJPL+JOjC8T6/YF9/FCAn4uo+H6Y8VBkXo9UJXIHoBewoc7iXj3tPeL0UCJhjA==} + /wavesurfer.js@6.4.0: + resolution: {integrity: sha512-+i9GkYdMTm998goOWvycWqCgxfbolnuGTPgrdGss7ZbQDuu+n6AHdnJwYnqxW8RZo5A2ck6ztzXbrXGuCi0m5g==} dev: false /webgl-constants@1.1.1: @@ -7573,24 +7436,6 @@ packages: is-symbol: 1.0.4 dev: true - /which-builtin-type@1.1.3: - resolution: {integrity: sha512-YmjsSMDBYsM1CaFiayOVT06+KJeXf0o5M/CAd4o1lTadFAtacTUM49zoYxr/oroopFDfhvN6iEcBxUyc3gvKmw==} - engines: {node: '>= 0.4'} - dependencies: - function.prototype.name: 1.1.6 - has-tostringtag: 1.0.0 - is-async-function: 2.0.0 - is-date-object: 1.0.5 - is-finalizationregistry: 1.0.2 - is-generator-function: 1.0.10 - is-regex: 1.1.4 - is-weakref: 1.0.2 - isarray: 2.0.5 - which-boxed-primitive: 1.0.2 - which-collection: 1.0.1 - which-typed-array: 1.1.11 - dev: true - /which-collection@1.0.1: resolution: {integrity: sha512-W8xeTUwaln8i3K/cY1nGXzdnVZlidBcagyNFtBdD5kxnb4TvGKR7FfSIS3mYpwWS1QUCutfKz8IY8RjftB0+1A==} dependencies: @@ -7617,6 +7462,7 @@ packages: hasBin: true dependencies: isexe: 2.0.0 + dev: true /wrap-ansi@7.0.0: resolution: {integrity: sha512-YVGIj2kamLSTxw6NsZjoBxfSwsn0ycdesmc4p+Q21c5zPuZ1pl+NfxVdxPtdHvmNVOQ6XSYG4AUtyt/Fi7D16Q==} @@ -7650,6 +7496,7 @@ packages: /yallist@3.1.1: resolution: {integrity: sha512-a4UGQaWPH59mOXUYnAG2ewncQS4i4F43Tv3JoAM+s2VDAmS9NsK8GpDMLrCHPksFT7h3K6TOoUNn2pb7RoXx4g==} + dev: true /yallist@4.0.0: resolution: {integrity: sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A==} @@ -7659,10 +7506,6 @@ packages: resolution: {integrity: sha512-r3vXyErRCYJ7wg28yvBY5VSoAF8ZvlcW9/BwUzEtUsjvX/DKs24dIkuwjtuprwJJHsbyUbLApepYTR1BN4uHrg==} engines: {node: '>= 6'} - /yaml@2.3.3: - resolution: {integrity: sha512-zw0VAJxgeZ6+++/su5AFoqBbZbrEakwu+X0M5HmcwUiBL7AzcuPKjj5we4xfQLp78LkEMpD0cOnUhmgOVy3KdQ==} - engines: {node: '>= 14'} - /yargs-parser@21.1.1: resolution: {integrity: sha512-tVpsJW7DdjecAiFpbIB1e3qxIQsE6NoPc5/eTdrbbIC4h0LVsWhnoa3g+m2HclBIujHzsxZ4VJVA+GUuc2/LBw==} engines: {node: '>=12'} @@ -7698,6 +7541,10 @@ packages: commander: 9.5.0 dev: true + /zstddec@0.0.2: + resolution: {integrity: sha512-DCo0oxvcvOTGP/f5FA6tz2Z6wF+FIcEApSTu0zV5sQgn9hoT5lZ9YRAKUraxt9oP7l4e8TnNdi8IZTCX6WCkwA==} + dev: false + /zustand@3.7.2(react@18.2.0): resolution: {integrity: sha512-PIJDIZKtokhof+9+60cpockVOq05sJzHCriyvaLBmEJixseQ1a5Kdov6fWZfWOu5SK9c+FhH1jU0tntLxRJYMA==} engines: {node: '>=12.7.0'} @@ -7710,23 +7557,19 @@ packages: react: 18.2.0 dev: false - /zustand@4.4.3(@types/react@18.2.28)(immer@9.0.21)(react@18.2.0): - resolution: {integrity: sha512-oRy+X3ZazZvLfmv6viIaQmtLOMeij1noakIsK/Y47PWYhT8glfXzQ4j0YcP5i0P0qI1A4rIB//SGROGyZhx91A==} + /zustand@4.3.3(immer@9.0.19)(react@18.2.0): + resolution: {integrity: sha512-x2jXq8S0kfLGNwGh87nhRfEc2eZy37tSatpSoSIN+O6HIaBhgQHSONV/F9VNrNcBcKQu/E80K1DeHDYQC/zCrQ==} engines: {node: '>=12.7.0'} peerDependencies: - '@types/react': '>=16.8' immer: '>=9.0' react: '>=16.8' peerDependenciesMeta: - '@types/react': - optional: true immer: optional: true react: optional: true dependencies: - '@types/react': 18.2.28 - immer: 9.0.21 + immer: 9.0.19 react: 18.2.0 use-sync-external-store: 1.2.0(react@18.2.0) dev: false diff --git a/src/components/LineChart/LineChart.tsx b/src/components/LineChart/LineChart.tsx index ded2520d..011be6f5 100644 --- a/src/components/LineChart/LineChart.tsx +++ b/src/components/LineChart/LineChart.tsx @@ -12,7 +12,7 @@ import { XAxis, YAxis, } from 'recharts'; -import tw from 'twin.macro'; +import tw, { styled } from 'twin.macro'; import { Vec2 } from '../../types'; import { largestTriangleThreeBuckets } from '../../math/downsampling'; From 5ad4bde16efe0c3636fd567b49f148934a1b5127 Mon Sep 17 00:00:00 2001 From: Dominik Haentsch Date: Mon, 23 Oct 2023 14:54:01 +0200 Subject: [PATCH 39/39] chore: update vulnerable dependencies --- package.json | 2 +- pnpm-lock.yaml | 196 ++++++++++++++++++++++++++++++++++--------------- 2 files changed, 139 insertions(+), 59 deletions(-) diff --git a/package.json b/package.json index 4abdd893..88e8f3a9 100644 --- a/package.json +++ b/package.json @@ -99,7 +99,7 @@ "@types/jest": "^29.4.0", "@types/lodash": "^4.14.191", "@types/node": "^18.14.1", - "@types/node-fetch": "2", + "@types/node-fetch": "^2.1.0", "@types/react": "^18.0.27", "@types/react-beautiful-dnd": "^13.1.3", "@types/react-dom": "^18.0.10", diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index 9f23dea8..9847ebd2 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -24,7 +24,7 @@ dependencies: version: 3.0.2 '@uiw/react-json-view': specifier: 2.0.0-alpha.7 - version: 2.0.0-alpha.7(@babel/runtime@7.22.6)(react-dom@18.2.0)(react@18.2.0) + version: 2.0.0-alpha.7(@babel/runtime@7.23.2)(react-dom@18.2.0)(react@18.2.0) chroma-js: specifier: ^2.4.2 version: 2.4.2 @@ -214,7 +214,7 @@ devDependencies: specifier: ^18.14.1 version: 18.14.1 '@types/node-fetch': - specifier: '2' + specifier: ^2.1.0 version: 2.1.0 '@types/react': specifier: ^18.0.27 @@ -299,7 +299,7 @@ devDependencies: version: 2.7.1 tailwindcss: specifier: ^3.3.1 - version: 3.3.1(postcss@8.4.27) + version: 3.3.1(postcss@8.4.31) ts-jest: specifier: ^29.0.5 version: 29.0.5(@babel/core@7.22.9)(jest@29.4.3)(typescript@5.1.6) @@ -334,6 +334,13 @@ packages: '@jridgewell/trace-mapping': 0.3.18 dev: true + /@babel/code-frame@7.22.13: + resolution: {integrity: sha512-XktuhWlJ5g+3TJXc5upd9Ks1HutSArik6jf2eAjYFyIOf4ej3RN+184cZbzDvbPnuTJIUhPKKJE3cIsYTiAT3w==} + engines: {node: '>=6.9.0'} + dependencies: + '@babel/highlight': 7.22.20 + chalk: 2.4.2 + /@babel/code-frame@7.22.5: resolution: {integrity: sha512-Xmwn266vad+6DAqEB2A6V/CcZVp62BbwVmcOJc2RPuwih1kw02TjQvWVWlcKGbBPd+8/0V5DEkOcizRGYsspYQ==} engines: {node: '>=6.9.0'} @@ -357,7 +364,7 @@ packages: '@babel/helpers': 7.22.6 '@babel/parser': 7.22.7 '@babel/template': 7.22.5 - 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tailwindcss: 3.3.1(postcss@8.4.27) + tailwindcss: 3.3.1(postcss@8.4.31) dev: true /type-check@0.4.0: @@ -7368,10 +7448,10 @@ packages: dependencies: '@types/node': 18.14.1 esbuild: 0.18.20 - postcss: 8.4.27 + postcss: 8.4.31 rollup: 3.27.2 optionalDependencies: - fsevents: 2.3.2 + fsevents: 2.3.3 dev: true /vm-browserify@1.1.2: