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@RNA-Puzzles

RNA-Puzzles

RNA-Puzzles: A CASP-like evaluation of RNA three-dimensional structure prediction

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  1. RNA_assessment RNA_assessment Public

    Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils.

    HTML 17 5

  2. standardized_dataset standardized_dataset Public

    Forked from mmagnus/RNA-Puzzles-Standardized-Submissions

    Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip

    Shell 5 1

  3. rna-tools rna-tools Public

    Forked from mmagnus/rna-tools

    🔧rna-tools (prev. rna-pdb-tools): a toolbox to analyze sequences, structures and simulations of RNA - docs @ http://rna-tools.rtfd.io web version http://rna-tools.online

    Jupyter Notebook 4 2

  4. comparison_metrics_list comparison_metrics_list Public

    Assessment metrics tools to compare RNA 3D structures.

    3 2

  5. rnaqua rnaqua Public

    Forked from mantczak/rnaqua

    Java 2 1

  6. raw_dataset_and_for_assessment raw_dataset_and_for_assessment Public

    This repository includes all the submitted RNA structures in RNA-Puzzles, include the `raw_dataset` and the `normalized_dataset`

    1 2

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