From bcf3c8ece23c5637a634af23202987a3a55e23d2 Mon Sep 17 00:00:00 2001 From: mattjmeier Date: Thu, 18 Jan 2024 14:36:21 -0500 Subject: [PATCH 1/2] Confusing problem with moving files that do exist --- Dockerfile | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/Dockerfile b/Dockerfile index 44401201..bef2cba4 100644 --- a/Dockerfile +++ b/Dockerfile @@ -32,7 +32,10 @@ WORKDIR "/home/R-ODAF/R-ODAF_Health_Canada" COPY . . RUN chown -R R-ODAF:R-ODAF /home/R-ODAF USER R-ODAF -RUN mv data data.bak && mv config config.bak +RUN /bin/bash -c "tree data.bak && tree config.bak && \ + mv data data.bak && mv config config.bak" +# Why??? +# RUN mv data data.bak && mv config config.bak RUN git clone https://github.com/EHSRB-BSRSE-Bioinformatics/test-data \ && mv test-data/temposeq/* ./ \ From 7ac40660e1d0cee54c5af18ed08e0a9e5ccde111 Mon Sep 17 00:00:00 2001 From: mattjmeier Date: Thu, 18 Jan 2024 14:42:13 -0500 Subject: [PATCH 2/2] rename tests workflow for clarity --- .github/workflows/tests.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 7094cf3a..247a9fb3 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -16,7 +16,7 @@ permissions: contents: read jobs: - build: + tests: env: GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} strategy: