diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 7094cf3a..247a9fb3 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -16,7 +16,7 @@ permissions: contents: read jobs: - build: + tests: env: GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} strategy: diff --git a/Dockerfile b/Dockerfile index 44401201..bef2cba4 100644 --- a/Dockerfile +++ b/Dockerfile @@ -32,7 +32,10 @@ WORKDIR "/home/R-ODAF/R-ODAF_Health_Canada" COPY . . RUN chown -R R-ODAF:R-ODAF /home/R-ODAF USER R-ODAF -RUN mv data data.bak && mv config config.bak +RUN /bin/bash -c "tree data.bak && tree config.bak && \ + mv data data.bak && mv config config.bak" +# Why??? +# RUN mv data data.bak && mv config config.bak RUN git clone https://github.com/EHSRB-BSRSE-Bioinformatics/test-data \ && mv test-data/temposeq/* ./ \