batch_mode.yml

name: Polyphy CI

on:
  push:
    branches: [ "main" ]
  pull_request:
    branches: [ "main" ]

jobs:
  build:
    runs-on: ubuntu-latest

    steps:
    - name: Checkout repository
      uses: actions/checkout@v2

    - name: Create /tmp/flag file
      run: echo "This is a flag file" > /tmp/flag

    - name: Install Python dependencies
      run: |
        python3 -m pip install --upgrade pip
        pip install -r requirements.txt 

    - name: Run polyphy.py for 2D_discrete
      run: |
        cd src/polyphy/ && python3 polyphy.py 2d_discrete -b -n 100 -f data/csv/sample_2D_linW.csv

    - name: Run polyphy.py for 3D_discrete
      run: |
        cd src/polyphy/ && python3 polyphy.py 3d_discrete -b -n 100 -f data/csv/sample_3D_linW.csv

    - name: Check if 4 files are created in data/fits
      run: |
        file_count=$(ls -1q data/fits/*.npy | wc -l)
        if [ $file_count -eq 4 ]; then
          echo "Success: 4 files found in data/fits"
        else
          echo "Error: Expected 4 files in data/fits, found $file_count"
          exit 1
        fi