diff --git a/docs/faq/memory.md b/docs/faq/memory.md index 5fcb18b..23c7675 100644 --- a/docs/faq/memory.md +++ b/docs/faq/memory.md @@ -13,10 +13,10 @@ In this case, memory usage (RES column in top) is approximately the size of the input, uncompressed. The maximum concurrent output BAM file handles can be adjusted with -`--bam-handles N`. The default is 500. +`--bam-handles N` or `--output-handles N`. The default is 500. Examples, how memory usage is affected by `--bam-handles`. Option -`--bam-handles-verbose` is only used to visualize the BAM output file handles. +`--bam-handles-verbose` or `--output-handles-verbose` is only used to visualize the BAM output file handles. Memory usage reported using [memusg](https://gist.github.com/netj/526585): $ lima input.bam barcodes.fasta out.bam --same --split-bam --bam-handles 9 --bam-handles-verbose