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v0.5.1 #80

Merged
merged 2 commits into from
Feb 21, 2024
Merged

v0.5.1 #80

merged 2 commits into from
Feb 21, 2024

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nebfield
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@nebfield nebfield commented Feb 21, 2024 •
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Changelog

  • Make aggregated_scores output consistent with ancestry_analysis output
  • Fix aggregate_scores not respecting --outdir
  • bump dependency versions with high security vulnerabilities

nebfield and others added 2 commits February 20, 2024 16:19
@nebfield
update vulnerable dependencies
d9c7389
@nebfield @smlmbrt
Update aggregation to match ancestry output (#79)
a4df14d 
* match ancestry aggregation output

* bump version

* fix column name (accession -> PGS)

* fix column name

* add aggregate tests

* fix not respecting outdir

* read new version of pgs

* drop onlySUM parameter

* Make sure it only reads SUM and provides the correct column names back

Signed-off-by: smlmbrt <[email protected]>

* drop deprecated parameter

---------

Signed-off-by: smlmbrt <[email protected]>
Co-authored-by: smlmbrt <[email protected]>
@nebfield nebfield marked this pull request as ready for review February 21, 2024 12:37
@nebfield nebfield merged commit cf5d0d5 into main Feb 21, 2024
3 checks passed
@nebfield nebfield deleted the dev branch February 21, 2024 13:24
@nebfield nebfield mentioned this pull request Feb 21, 2024
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@smlmbrt smlmbrt smlmbrt approved these changes

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@nebfield @smlmbrt