From 87379a565ddac5559a729d96ad7d0a15d4f45cd1 Mon Sep 17 00:00:00 2001 From: dilpath Date: Thu, 1 Feb 2024 16:03:32 +0100 Subject: [PATCH] estimated parameter is now stored --- requirements_dev.txt | 1 + test/cli/expected_output/model/parameters.tsv | 2 +- test/cli/expected_output/models/model_1/parameters.tsv | 2 +- test/model/expected_output/petab/parameters.tsv | 2 +- 4 files changed, 4 insertions(+), 3 deletions(-) diff --git a/requirements_dev.txt b/requirements_dev.txt index 311bf079..d97e855d 100644 --- a/requirements_dev.txt +++ b/requirements_dev.txt @@ -1,3 +1,4 @@ tox >= 3.12.4 pre-commit >= 2.10.1 flake8 >= 4.0.1 +pytest diff --git a/test/cli/expected_output/model/parameters.tsv b/test/cli/expected_output/model/parameters.tsv index 24f7485d..15b3ec6e 100644 --- a/test/cli/expected_output/model/parameters.tsv +++ b/test/cli/expected_output/model/parameters.tsv @@ -1,6 +1,6 @@ parameterId parameterName parameterScale lowerBound upperBound nominalValue estimate k1 k_{1} lin 0.0 1000.0 0.2 0 -k2 k_{2} lin 0.0 1000.0 0.1 1 +k2 k_{2} lin 0.0 1000.0 0.15 1 k3 k_{3} lin 0.0 1000.0 0.0 1 k4 k_{4} lin 0.0 1000.0 0.0 0 k5 k_{5} lin 0.0 1000.0 0.0 0 diff --git a/test/cli/expected_output/models/model_1/parameters.tsv b/test/cli/expected_output/models/model_1/parameters.tsv index 24f7485d..15b3ec6e 100644 --- a/test/cli/expected_output/models/model_1/parameters.tsv +++ b/test/cli/expected_output/models/model_1/parameters.tsv @@ -1,6 +1,6 @@ parameterId parameterName parameterScale lowerBound upperBound nominalValue estimate k1 k_{1} lin 0.0 1000.0 0.2 0 -k2 k_{2} lin 0.0 1000.0 0.1 1 +k2 k_{2} lin 0.0 1000.0 0.15 1 k3 k_{3} lin 0.0 1000.0 0.0 1 k4 k_{4} lin 0.0 1000.0 0.0 0 k5 k_{5} lin 0.0 1000.0 0.0 0 diff --git a/test/model/expected_output/petab/parameters.tsv b/test/model/expected_output/petab/parameters.tsv index 24f7485d..15b3ec6e 100644 --- a/test/model/expected_output/petab/parameters.tsv +++ b/test/model/expected_output/petab/parameters.tsv @@ -1,6 +1,6 @@ parameterId parameterName parameterScale lowerBound upperBound nominalValue estimate k1 k_{1} lin 0.0 1000.0 0.2 0 -k2 k_{2} lin 0.0 1000.0 0.1 1 +k2 k_{2} lin 0.0 1000.0 0.15 1 k3 k_{3} lin 0.0 1000.0 0.0 1 k4 k_{4} lin 0.0 1000.0 0.0 0 k5 k_{5} lin 0.0 1000.0 0.0 0