From af55878f07c0b42beffb07ca6f15ce72c648d5c4 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Wed, 24 Sep 2014 17:30:46 +0200 Subject: [PATCH 01/21] Updated version string to 1.3.1-dev after release of 1.3.0 --- ResInsightVersion.cmake | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ResInsightVersion.cmake b/ResInsightVersion.cmake index 59bddbc2c0..f611c67f07 100644 --- a/ResInsightVersion.cmake +++ b/ResInsightVersion.cmake @@ -1,8 +1,8 @@ set(CMAKE_MAJOR_VERSION 1) set(CMAKE_MINOR_VERSION 3) -set(CMAKE_PATCH_VERSION 0) -# set(DEV_VERSION "-dev") +set(CMAKE_PATCH_VERSION 1) +set(DEV_VERSION "-dev") set(PRODUCTVER ${CMAKE_MAJOR_VERSION},${CMAKE_MINOR_VERSION},0,${CMAKE_PATCH_VERSION}) set(STRPRODUCTVER ${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}.${CMAKE_PATCH_VERSION}${DEV_VERSION}) From a8ce90e404092dd401b7361df418352172005dbc Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Fri, 26 Sep 2014 08:15:22 +0200 Subject: [PATCH 02/21] Always compute grid faults --- ApplicationCode/Application/RiaPreferences.cpp | 7 +------ ApplicationCode/Application/RiaPreferences.h | 1 - ApplicationCode/ProjectDataModel/RimCase.cpp | 10 +++------- ApplicationCode/ReservoirDataModel/RigMainGrid.cpp | 2 ++ 4 files changed, 6 insertions(+), 14 deletions(-) diff --git a/ApplicationCode/Application/RiaPreferences.cpp b/ApplicationCode/Application/RiaPreferences.cpp index 4271085fe0..74b51c792c 100644 --- a/ApplicationCode/Application/RiaPreferences.cpp +++ b/ApplicationCode/Application/RiaPreferences.cpp @@ -65,10 +65,8 @@ RiaPreferences::RiaPreferences(void) lastUsedProjectFileName.setUiHidden(true); CAF_PDM_InitField(&autocomputeDepthRelatedProperties, "autocomputeDepth", true, "DEPTH related properties", "", "DEPTH, DX, DY, DZ, TOP, BOTTOM", ""); - CAF_PDM_InitField(&autocomputeGridFaults, "autocomputeGridFaults", true, "Grid faults", "", "Detect all fault faces geometrically", ""); autocomputeDepthRelatedProperties.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); - autocomputeGridFaults.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); readerSettings = new RifReaderSettings; CAF_PDM_InitFieldNoDefault(&readerSettings, "readerSettings", "Reader settings", "", "", ""); @@ -99,8 +97,7 @@ void RiaPreferences::defineEditorAttribute(const caf::PdmFieldHandle* field, QSt } } else if (field == &octaveShowHeaderInfoWhenExecutingScripts || - field == &autocomputeDepthRelatedProperties || - field == &autocomputeGridFaults) + field == &autocomputeDepthRelatedProperties) { caf::PdmUiCheckBoxEditorAttribute* myAttr = static_cast(attribute); if (myAttr) @@ -135,8 +132,6 @@ void RiaPreferences::defineUiOrdering(QString uiConfigName, caf::PdmUiOrdering& caf::PdmUiGroup* autoComputeGroup = uiOrdering.addNewGroup("Compute when loading new case"); autoComputeGroup->add(&autocomputeDepthRelatedProperties); - autoComputeGroup->add(&autocomputeGridFaults); - caf::PdmUiGroup* readerSettingsGroup = uiOrdering.addNewGroup("Reader settings"); std::vector readerSettingsFields; diff --git a/ApplicationCode/Application/RiaPreferences.h b/ApplicationCode/Application/RiaPreferences.h index 7d3f89b9ff..604adf122a 100644 --- a/ApplicationCode/Application/RiaPreferences.h +++ b/ApplicationCode/Application/RiaPreferences.h @@ -65,7 +65,6 @@ class RiaPreferences : public caf::PdmObject caf::PdmField lastUsedProjectFileName; caf::PdmField autocomputeDepthRelatedProperties; - caf::PdmField autocomputeGridFaults; caf::PdmField readerSettings; diff --git a/ApplicationCode/ProjectDataModel/RimCase.cpp b/ApplicationCode/ProjectDataModel/RimCase.cpp index 9343c17afe..371f5c8f6d 100644 --- a/ApplicationCode/ProjectDataModel/RimCase.cpp +++ b/ApplicationCode/ProjectDataModel/RimCase.cpp @@ -307,13 +307,9 @@ void RimCase::computeCachedData() rigEclipseCase->mainGrid()->computeCachedData(); pInf.incrementProgress(); - RiaPreferences* prefs = RiaApplication::instance()->preferences(); - if (prefs->autocomputeGridFaults) - { - pInf.setProgressDescription("Calculating faults"); - rigEclipseCase->mainGrid()->calculateFaults(); - pInf.incrementProgress(); - } + pInf.setProgressDescription("Calculating faults"); + rigEclipseCase->mainGrid()->calculateFaults(); + pInf.incrementProgress(); } } diff --git a/ApplicationCode/ReservoirDataModel/RigMainGrid.cpp b/ApplicationCode/ReservoirDataModel/RigMainGrid.cpp index 0e5412221f..9d6c271c62 100644 --- a/ApplicationCode/ReservoirDataModel/RigMainGrid.cpp +++ b/ApplicationCode/ReservoirDataModel/RigMainGrid.cpp @@ -405,6 +405,8 @@ bool RigMainGrid::isFaceNormalsOutwards() const //-------------------------------------------------------------------------------------------------- const RigFault* RigMainGrid::findFaultFromCellIndexAndCellFace(size_t reservoirCellIndex, cvf::StructGridInterface::FaceType face) const { + CVF_ASSERT(m_faultsPrCellAcc.notNull()); + int faultIdx = m_faultsPrCellAcc->faultIdx(reservoirCellIndex, face); if (faultIdx != RigFaultsPrCellAccumulator::NO_FAULT ) { From b93053b089ce9baecb96de65b9bdcb2ea62aacae Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Thu, 9 Oct 2014 20:13:04 +0200 Subject: [PATCH 03/21] Updated ERT to 946e512ac17c1e2469892072a925428c0a012fa1 --- .../FileInterface/RifReaderEclipseOutput.cpp | 2 +- ThirdParty/Ert/devel/CMakeLists.txt | 44 +- .../cmake/Tests/test_mktime_before1970.c | 2 + ThirdParty/Ert/devel/cmake/ert_check.cmake | 12 +- ThirdParty/Ert/devel/cmake/ert_link.cmake | 6 +- .../Ert/devel/cmake/ert_module_name.cmake | 17 + ThirdParty/Ert/devel/docs/CMakeLists.txt | 11 + ThirdParty/Ert/devel/docs/Static/index.rst | 6 + ThirdParty/Ert/devel/docs/build_doc.cmake | 6 + ThirdParty/Ert/devel/docs/conf.py | 332 + ThirdParty/Ert/devel/docs/index.rst | 26 + .../Ert/devel/libanalysis/CMakeLists.txt | 6 +- .../libanalysis/applications/CMakeLists.txt | 14 +- .../include/ert/analysis/analysis_module.h | 14 +- .../include/ert/analysis/analysis_table.h | 5 +- .../include/ert/analysis/cv_enkf.h | 2 + .../include/ert/analysis/enkf_linalg.h | 11 +- .../include/ert/analysis/std_enkf.h | 6 +- .../devel/libanalysis/modules/CMakeLists.txt | 47 +- .../libanalysis/modules/deprecated/rml_enkf.c | 427 + .../Ert/devel/libanalysis/modules/rml_enkf.c | 907 +- .../libanalysis/modules/rml_enkf_common.c | 107 +- .../libanalysis/modules/rml_enkf_common.h | 16 +- .../libanalysis/modules/rml_enkf_imodel.c | 532 -- .../libanalysis/modules/tests/CMakeLists.txt | 5 + .../modules/tests/analysis_rml_enkf_common.c | 133 + .../devel/libanalysis/script/CMakeLists.txt | 9 +- .../Ert/devel/libanalysis/script/ert_module | 41 +- .../Ert/devel/libanalysis/src/CMakeLists.txt | 2 +- .../devel/libanalysis/src/analysis_module.c | 29 +- .../devel/libanalysis/src/bootstrap_enkf.c | 307 +- .../Ert/devel/libanalysis/src/cv_enkf.c | 57 +- .../Ert/devel/libanalysis/src/enkf_linalg.c | 188 +- .../Ert/devel/libanalysis/src/fwd_step_enkf.c | 44 +- .../Ert/devel/libanalysis/src/sqrt_enkf.c | 29 +- .../Ert/devel/libanalysis/src/std_enkf.c | 39 +- .../devel/libanalysis/tests/CMakeLists.txt | 21 +- .../tests/analysis_test_external_module.c | 49 +- .../libconfig/include/ert/config/config.h | 2 + ThirdParty/Ert/devel/libconfig/src/config.c | 9 + .../devel/libconfig/src/config_content_item.c | 4 +- .../Ert/devel/libconfig/tests/CMakeLists.txt | 4 + .../Ert/devel/libconfig/tests/config_define.c | 69 + .../devel/libconfig/tests/data/define_test | 5 + .../Ert/devel/libecl/applications/esummary.c | 46 +- .../libecl/applications/grid_dump_ascii.c | 2 +- .../Ert/devel/libecl/applications/grid_info.c | 2 +- .../Ert/devel/libecl/applications/load_test.c | 116 +- .../libecl/include/ert/ecl/ecl_coarse_cell.h | 3 +- .../libecl/include/ert/ecl/ecl_endian_flip.h | 2 - .../devel/libecl/include/ert/ecl/ecl_file.h | 8 +- .../libecl/include/ert/ecl/ecl_file_kw.h | 1 + .../devel/libecl/include/ert/ecl/ecl_grid.h | 38 +- .../Ert/devel/libecl/include/ert/ecl/ecl_kw.h | 5 + .../devel/libecl/include/ert/ecl/ecl_region.h | 1 + .../devel/libecl/include/ert/ecl/ecl_sum.h | 1 - .../devel/libecl/include/ert/ecl/ecl_util.h | 9 + .../libecl/include/ert/ecl/fault_block.h | 59 + .../include/ert/ecl/fault_block_layer.h | 61 + .../Ert/devel/libecl/include/ert/ecl/fortio.h | 9 +- .../Ert/devel/libecl/include/ert/ecl/layer.h | 78 + .../devel/libecl/include/ert/ecl/nnc_info.h | 3 + .../devel/libecl/include/ert/ecl/nnc_vector.h | 4 +- .../Ert/devel/libecl/include/ert/ecl/point.h | 4 +- .../libecl/include/ert/ecl/tetrahedron.h | 1 + .../Ert/devel/libecl/src/CMakeLists.txt | 79 +- .../Ert/devel/libecl/src/ecl_coarse_cell.c | 37 +- ThirdParty/Ert/devel/libecl/src/ecl_file.c | 40 +- ThirdParty/Ert/devel/libecl/src/ecl_file_kw.c | 3 + ThirdParty/Ert/devel/libecl/src/ecl_grid.c | 1072 ++- .../Ert/devel/libecl/src/ecl_init_file.c | 2 +- ThirdParty/Ert/devel/libecl/src/ecl_kw.c | 75 +- .../Ert/devel/libecl/src/ecl_kw_grdecl.c | 3 +- ThirdParty/Ert/devel/libecl/src/ecl_region.c | 11 + ThirdParty/Ert/devel/libecl/src/ecl_smspec.c | 9 +- .../Ert/devel/libecl/src/ecl_sum_data.c | 26 +- ThirdParty/Ert/devel/libecl/src/ecl_util.c | 57 +- ThirdParty/Ert/devel/libecl/src/fault_block.c | 267 + .../Ert/devel/libecl/src/fault_block_layer.c | 342 + ThirdParty/Ert/devel/libecl/src/fortio.c | 31 +- ThirdParty/Ert/devel/libecl/src/layer.c | 521 ++ ThirdParty/Ert/devel/libecl/src/nnc_info.c | 62 +- ThirdParty/Ert/devel/libecl/src/nnc_vector.c | 33 + ThirdParty/Ert/devel/libecl/src/point.c | 37 +- ThirdParty/Ert/devel/libecl/src/tetrahedron.c | 75 +- .../Ert/devel/libecl/tests/data/num_cpu4 | 3 + .../ecl_fault_block_collection_statoil.c | 78 + .../libecl/tests/ecl_fault_block_layer.c | 194 + .../tests/ecl_fault_block_layer_statoil.c | 89 + .../Ert/devel/libecl/tests/ecl_fortio.c | 36 + .../devel/libecl/tests/ecl_get_num_cpu_test.c | 4 + .../Ert/devel/libecl/tests/ecl_grid_DEPTHZ.c | 188 + .../libecl/tests/ecl_grid_cell_contains.c | 288 + .../devel/libecl/tests/ecl_grid_cell_volume.c | 57 + .../Ert/devel/libecl/tests/ecl_grid_copy.c | 48 + .../libecl/tests/ecl_grid_copy_statoil.c | 52 + .../Ert/devel/libecl/tests/ecl_grid_corner.c | 72 + .../Ert/devel/libecl/tests/ecl_grid_create.c | 145 + .../Ert/devel/libecl/tests/ecl_grid_export.c | 107 + .../Ert/devel/libecl/tests/ecl_grid_fwrite.c | 48 + .../libecl/tests/ecl_grid_reset_actnum.c | 65 + .../Ert/devel/libecl/tests/ecl_grid_volume.c | 19 +- .../Ert/devel/libecl/tests/ecl_kw_init.c | 65 + ThirdParty/Ert/devel/libecl/tests/ecl_layer.c | 378 + .../devel/libecl/tests/ecl_layer_statoil.c | 91 + .../devel/libecl/tests/ecl_nnc_info_test.c | 52 +- .../Ert/devel/libecl/tests/ecl_nnc_vector.c | 42 +- ThirdParty/Ert/devel/libecl/tests/ecl_point.c | 117 + .../libecl/tests/ecl_tetrahedron_contains.c | 91 + .../devel/libecl/tests/ecl_valid_basename.c | 9 +- ThirdParty/Ert/devel/libecl/tests/tests.cmake | 144 +- .../libecl_well/applications/segment_info.c | 6 +- .../include/ert/ecl_well/well_info.h | 2 + .../include/ert/ecl_well/well_rseg_loader.h | 42 + .../include/ert/ecl_well/well_segment.h | 3 +- .../ert/ecl_well/well_segment_collection.h | 5 +- .../include/ert/ecl_well/well_state.h | 1 - .../Ert/devel/libecl_well/src/CMakeLists.txt | 26 +- .../Ert/devel/libecl_well/src/well_info.c | 49 +- .../devel/libecl_well/src/well_rseg_loader.c | 90 + .../Ert/devel/libecl_well/src/well_segment.c | 29 +- .../libecl_well/src/well_segment_collection.c | 4 +- .../Ert/devel/libecl_well/src/well_state.c | 22 +- .../tests/well_segment_branch_conn_load.c | 5 +- .../libecl_well/tests/well_segment_load.c | 9 +- .../libenkf/applications/ert_gui/bin/clean.py | 36 - .../applications/ert_gui/bin/gdbcommands | 1 - .../libenkf/applications/ert_gui/bin/gert | 14 - .../applications/ert_gui/bin/install.py | 52 - .../applications/ert_gui/bin/install.sh | 73 - .../ert_gui/bin/remove_lock_files.sh | 12 - .../applications/ert_tui/enkf_tui_export.c | 4 +- .../applications/ert_tui/enkf_tui_fs.c | 21 +- .../applications/ert_tui/enkf_tui_plot.c | 2 +- .../applications/ert_tui/enkf_tui_ranking.c | 10 +- .../applications/ert_tui/enkf_tui_run.c | 120 +- .../applications/ert_tui/enkf_tui_workflow.c | 4 +- .../include/ert/enkf/analysis_config.h | 2 + .../include/ert/enkf/analysis_iter_config.h | 9 +- .../libenkf/include/ert/enkf/block_obs.h | 34 +- .../libenkf/include/ert/enkf/config_keys.h | 35 +- .../libenkf/include/ert/enkf/container.h | 2 + .../include/ert/enkf/container_config.h | 4 +- .../libenkf/include/ert/enkf/ecl_config.h | 6 +- .../libenkf/include/ert/enkf/enkf_analysis.h | 2 + .../include/ert/enkf/enkf_config_node.h | 80 +- .../libenkf/include/ert/enkf/enkf_defaults.h | 7 + .../devel/libenkf/include/ert/enkf/enkf_fs.h | 15 +- .../libenkf/include/ert/enkf/enkf_macros.h | 27 +- .../libenkf/include/ert/enkf/enkf_main.h | 183 +- 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29 +- ThirdParty/Ert/devel/libenkf/src/block_obs.c | 217 +- ThirdParty/Ert/devel/libenkf/src/container.c | 10 + .../Ert/devel/libenkf/src/container_config.c | 1 + ThirdParty/Ert/devel/libenkf/src/ecl_config.c | 56 +- .../Ert/devel/libenkf/src/ecl_static_kw.c | 6 +- .../Ert/devel/libenkf/src/enkf_analysis.c | 27 +- .../Ert/devel/libenkf/src/enkf_config_node.c | 334 +- ThirdParty/Ert/devel/libenkf/src/enkf_fs.c | 116 +- ThirdParty/Ert/devel/libenkf/src/enkf_main.c | 1406 ++-- .../Ert/devel/libenkf/src/enkf_main_jobs.c | 577 +- .../devel/libenkf/src/enkf_main_manage_fs.c | 644 ++ ThirdParty/Ert/devel/libenkf/src/enkf_node.c | 80 +- ThirdParty/Ert/devel/libenkf/src/enkf_obs.c | 245 +- .../Ert/devel/libenkf/src/enkf_plot_data.c | 1 - .../Ert/devel/libenkf/src/enkf_plot_gen_kw.c | 148 + .../libenkf/src/enkf_plot_gen_kw_vector.c | 97 + .../Ert/devel/libenkf/src/enkf_plot_gendata.c | 205 + .../devel/libenkf/src/enkf_plot_genvector.c | 97 + .../Ert/devel/libenkf/src/enkf_plot_tvector.c | 15 +- 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.../Ert/devel/libenkf/src/pca_plot_data.c | 19 +- .../Ert/devel/libenkf/src/pca_plot_vector.c | 22 +- ThirdParty/Ert/devel/libenkf/src/qc_module.c | 7 +- .../Ert/devel/libenkf/src/ranking_table.c | 30 +- ThirdParty/Ert/devel/libenkf/src/rng_config.c | 22 +- .../Ert/devel/libenkf/src/runpath_list.c | 19 +- .../Ert/devel/libenkf/src/site_config.c | 62 +- ThirdParty/Ert/devel/libenkf/src/state_map.c | 9 +- ThirdParty/Ert/devel/libenkf/src/summary.c | 29 +- .../Ert/devel/libenkf/src/summary_config.c | 2 +- .../Ert/devel/libenkf/src/summary_obs.c | 1 + ThirdParty/Ert/devel/libenkf/src/surface.c | 16 +- ThirdParty/Ert/devel/libenkf/src/time_map.c | 408 +- ThirdParty/Ert/devel/libenkf/src/trans_func.c | 18 +- .../Ert/devel/libenkf/tests/CMakeLists.txt | 220 +- .../tests/data/config/analysis_load_config | 1 + .../data/config/analysis_load_site_config | 2 + .../data/config/gen_kw_plot/Parameters.txt | 5 + .../data/config/gen_kw_plot/Template.tmpl | 1 + .../tests/data/config/gen_kw_plot/config | 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ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS_ITER create mode 100644 ThirdParty/Ert/devel/share/workflows/jobs/internal/config/OBSERVATION_RANKING create mode 100644 ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER_WITH_ITER create mode 100644 ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault1.grdecl create mode 100644 ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault2.grdecl create mode 100644 ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/faults_nb.grdecl rename ThirdParty/Ert/devel/{python/test => }/test-data/local/ECLIPSE/grdecl-test/test.grdecl (100%) rename ThirdParty/Ert/devel/{python/test => }/test-data/local/ECLIPSE/grdecl-test/test.grdecl_dos (100%) create mode 100644 ThirdParty/Ert/devel/test-data/local/config/gen_data/REFCASE.SMSPEC create mode 100644 ThirdParty/Ert/devel/test-data/local/config/gen_data/REFCASE.UNSMRY create mode 100644 ThirdParty/Ert/devel/test-data/local/config/gen_data/config create mode 100644 ThirdParty/Ert/devel/test-data/local/config/gen_data/gen_obs_data create mode 100644 ThirdParty/Ert/devel/test-data/local/config/gen_data/observations rename ThirdParty/Ert/devel/{python/test => }/test-data/local/config/simple_config (100%) create mode 100644 ThirdParty/Ert/devel/test-data/local/geometry/pol11.xyz create mode 100644 ThirdParty/Ert/devel/test-data/local/geometry/pol8.xyz rename ThirdParty/Ert/devel/{python/test/test-data/local/simple_config/minimum_config => test-data/local/resopt/config/simple/config} (76%) create mode 100644 ThirdParty/Ert/devel/test-data/local/run/config.txt create mode 100644 ThirdParty/Ert/devel/test-data/local/simple_config/minimum_config rename ThirdParty/Ert/devel/{python/test => }/test-data/local/simple_config/script.sh (100%) rename ThirdParty/Ert/devel/{python/test => }/test-data/local/util/latex/report_OK.tex (100%) rename ThirdParty/Ert/devel/{python/test => }/test-data/local/util/latex/report_error.tex (100%) rename ThirdParty/Ert/devel/{python/test => }/test-data/local/util/latex/test_OK.tex (100%) rename ThirdParty/Ert/devel/{python/test => }/test-data/local/util/latex/test_error.tex (100%) diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp index 40b0ea6e12..8c9a26c448 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp @@ -152,7 +152,7 @@ bool transferGridCellData(RigMainGrid* mainGrid, RigActiveCellInfo* activeCellIn for (cIdx = 0; cIdx < 8; ++cIdx) { double * point = mainGrid->nodes()[nodeStartIndex + gridLocalCellIndex * 8 + cellMappingECLRi[cIdx]].ptr(); - ecl_grid_get_corner_xyz1(localEclGrid, gridLocalCellIndex, cIdx, &(point[0]), &(point[1]), &(point[2])); + ecl_grid_get_cell_corner_xyz1(localEclGrid, gridLocalCellIndex, cIdx, &(point[0]), &(point[1]), &(point[2])); point[2] = -point[2]; // Flipping Z making depth become negative z values cell.cornerIndices()[cIdx] = nodeStartIndex + gridLocalCellIndex*8 + cIdx; } diff --git a/ThirdParty/Ert/devel/CMakeLists.txt b/ThirdParty/Ert/devel/CMakeLists.txt index 486d571f0c..e2c0cdb6d0 100644 --- a/ThirdParty/Ert/devel/CMakeLists.txt +++ b/ThirdParty/Ert/devel/CMakeLists.txt @@ -1,8 +1,14 @@ cmake_minimum_required( VERSION 2.8 ) project( ERT C CXX ) +if(POLICY CMP0042) + cmake_policy(SET CMP0042 OLD) +endif() + set( ERT_VERSION_MAJOR 1 ) -set( ERT_VERSION_MINOR 0 ) +set( ERT_VERSION_MINOR 7 ) +set( ERT_VERSION_MICRO X ) + option( BUILD_ERT "Build the full ERT application - Linux only" OFF) option( BUILD_ENS_PLOT "Build small Eclipse plotting program - no" OFF) @@ -14,6 +20,8 @@ option( BUILD_SHARED_LIBS "Build shared libraries" ON ) option( INSTALL_ERT "Should anything be installed when issuing make install?" ON) option( ERT_BUILD_GUI "Should the pyQt based gui be compiled and installed" OFF ) option( ERT_USE_OPENMP "Use OpenMP - currently only in EclGrid" OFF) +option( ERT_DOC "Build ERT documantation" OFF) + include( CheckFunctionExists ) include( CheckTypeSize ) @@ -22,6 +30,10 @@ ENABLE_TESTING() if (${CMAKE_SYSTEM_NAME} MATCHES "Linux") set(ERT_LINUX TRUE ) add_definitions( -DERT_LINUX ) +elseif(${CMAKE_SYSTEM_NAME} MATCHES "Darwin") + set(ERT_LINUX TRUE ) + set(ERT_MAC TRUE) + add_definitions( -DERT_LINUX ) elseif (${CMAKE_SYSTEM_NAME} MATCHES "Windows") set(ERT_WINDOWS TRUE) add_definitions( -DERT_WINDOWS ) @@ -29,16 +41,29 @@ elseif (${CMAKE_SYSTEM_NAME} MATCHES "Windows") add_definitions( -DWINDOWS_LFS ) endif() +if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES) + message(STATUS "Setting build type to 'RelWithDebInfo' as none was specified.") + set(CMAKE_BUILD_TYPE RelWithDebInfo CACHE STRING + "Choose the type of build, options are: Debug Release RelWithDebInfo MinSizeRel." FORCE) + # Set the possible values of build type for cmake-gui + set_property(CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS "Debug" "Release" + "MinSizeRel" "RelWithDebInfo") +endif() # Treat warnings as errors if not on Windows -if (ERT_WINDOWS) - set( CMAKE_C_FLAGS "-O2" ) - set( CMAKE_CXX_FLAGS "-O2" ) -else() - set( CMAKE_C_FLAGS "-std=gnu99 -g -O2 -Wall -Wno-unknown-pragmas " ) - set( CMAKE_CXX_FLAGS "-g -Wall -O2 ") +if (NOT ERT_WINDOWS) + set( CMAKE_C_FLAGS "-std=gnu99 -Wall -Wno-unknown-pragmas ") + set( CMAKE_CXX_FLAGS "-Wall " ) +endif() + +if (MSVC) + add_definitions( "/W3 /D_CRT_SECURE_NO_WARNINGS /wd4996" ) + add_definitions( -DCOMPILER_MSVC ) +elseif (CMAKE_COMPILER_IS_GNUCC) + add_definitions( -DCOMPILER_GCC ) endif() + if (ERT_USE_OPENMP) find_package(OpenMP) if (OPENMP_FOUND) @@ -118,6 +143,8 @@ add_subdirectory( libecl_well ) #----------------------------------------------------------------- if (BUILD_ERT) #----------------------------------------------------------------- + include(cmake/ert_module_name.cmake) + include_directories( ${PROJECT_SOURCE_DIR}/libconfig/include ) add_subdirectory( libconfig ) @@ -143,5 +170,8 @@ endif() if (BUILD_PYTHON) include(cmake/python.cmake2) add_subdirectory( python ) + if(ERT_DOC) + add_subdirectory( docs ) + endif() endif() diff --git a/ThirdParty/Ert/devel/cmake/Tests/test_mktime_before1970.c b/ThirdParty/Ert/devel/cmake/Tests/test_mktime_before1970.c index 93bac8e75f..95feb71dfb 100644 --- a/ThirdParty/Ert/devel/cmake/Tests/test_mktime_before1970.c +++ b/ThirdParty/Ert/devel/cmake/Tests/test_mktime_before1970.c @@ -1,6 +1,8 @@ #include #include #include +#include +#include int main(int argc, char ** argv) { struct tm ts; diff --git a/ThirdParty/Ert/devel/cmake/ert_check.cmake b/ThirdParty/Ert/devel/cmake/ert_check.cmake index 2e01480253..cb8b7427f4 100644 --- a/ThirdParty/Ert/devel/cmake/ert_check.cmake +++ b/ThirdParty/Ert/devel/cmake/ert_check.cmake @@ -13,6 +13,12 @@ if (HAVE_REALPATH) add_definitions( -DHAVE_REALPATH ) endif() +check_function_exists( chmod HAVE_CHMOD ) +check_type_size( mode_t SIZE_MODE_T ) +if (HAVE_CHMOD AND HAVE_SIZE_MODE_T) + add_definitions( -DHAVE_CHMOD_AND_MODE_T ) +endif() + check_function_exists( fork HAVE_FORK ) if (HAVE_FORK) add_definitions( -DHAVE_FORK ) @@ -143,8 +149,10 @@ endif() check_type_size(time_t SIZE_OF_TIME_T) if (${SIZE_OF_TIME_T} EQUAL 8) try_run( RUN_RESULT COMPILE_RESULT ${CMAKE_BINARY_DIR} ${PROJECT_SOURCE_DIR}/cmake/Tests/test_mktime_before1970.c ) - if (RUN_RESULT) - add_defintions( -DTIME_T_64BIT_ACCEPT_PRE1970 ) + if (${COMPILE_RESULT}) + if (${RUN_RESULT} EQUAL 0) + add_definitions( -DTIME_T_64BIT_ACCEPT_PRE1970 ) + endif() endif() endif() diff --git a/ThirdParty/Ert/devel/cmake/ert_link.cmake b/ThirdParty/Ert/devel/cmake/ert_link.cmake index 8664a76564..3194bf43ca 100644 --- a/ThirdParty/Ert/devel/cmake/ert_link.cmake +++ b/ThirdParty/Ert/devel/cmake/ert_link.cmake @@ -1,5 +1,5 @@ if (CMAKE_COMPILER_IS_GNUCC) - option (USE_RUNPATH "Embed original dependency paths in installed library" OFF) + option (USE_RUNPATH "Embed original dependency paths in installed library" ON) if (USE_RUNPATH) set (CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}") set (CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE) @@ -10,5 +10,7 @@ endif() macro( add_runpath target ) - set_target_properties( ${target} PROPERTIES LINK_FLAGS -Wl,--enable-new-dtags) + if(NOT ERT_MAC) + set_target_properties( ${target} PROPERTIES LINK_FLAGS -Wl,--enable-new-dtags) + endif() endmacro() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/cmake/ert_module_name.cmake b/ThirdParty/Ert/devel/cmake/ert_module_name.cmake new file mode 100644 index 0000000000..84dd438225 --- /dev/null +++ b/ThirdParty/Ert/devel/cmake/ert_module_name.cmake @@ -0,0 +1,17 @@ +function( ert_module_name module module_name lib_path ) + + set( osx_file ${lib_path}/${module_name}.dylib ) + set( linux_file ${lib_path}/${module_name}.so ) + set( win_file ${lib_path}/${module_name}.dll ) + + if (${CMAKE_SYSTEM_NAME} MATCHES "Linux") + set( ${module} ${linux_file} PARENT_SCOPE) + elseif (${CMAKE_SYSTEM_NAME} MATCHES "Darwin") + set( ${module} ${osx_file} PARENT_SCOPE) + elseif (${CMAKE_SYSTEM_NAME} MATCHES "Windows") + set( ${module} ${win_file} PARENT_SCOPE) + else() + message( FATAL_ERROR "Hmmm - which platform is this ??") + endif() + +endfunction() diff --git a/ThirdParty/Ert/devel/docs/CMakeLists.txt b/ThirdParty/Ert/devel/docs/CMakeLists.txt new file mode 100644 index 0000000000..b4f119249f --- /dev/null +++ b/ThirdParty/Ert/devel/docs/CMakeLists.txt @@ -0,0 +1,11 @@ +set( ERT_DOC_INSTALL_PATH "" CACHE PATH "Absolute path to install documentation *in addition* to $PREFIX/documentation") + +file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/Static DESTINATION ${PROJECT_BINARY_DIR}/tmp_doc/) +add_custom_target(doc_out ALL + COMMAND ${CMAKE_COMMAND} -Dccsd=${CMAKE_CURRENT_SOURCE_DIR} -Dpbd=${PROJECT_BINARY_DIR} -P ${CMAKE_CURRENT_SOURCE_DIR}/build_doc.cmake + DEPENDS enkf ) + +INSTALL( DIRECTORY ${PROJECT_BINARY_DIR}/tmp_doc/_build/ DESTINATION ${CMAKE_INSTALL_PREFIX}/documentation ) +if (ERT_DOC_INSTALL_PATH) + INSTALL( DIRECTORY ${PROJECT_BINARY_DIR}/tmp_doc/_build/ DESTINATION ${ERT_DOC_INSTALL_PATH} ) +endif() diff --git a/ThirdParty/Ert/devel/docs/Static/index.rst b/ThirdParty/Ert/devel/docs/Static/index.rst new file mode 100644 index 0000000000..2361929adf --- /dev/null +++ b/ThirdParty/Ert/devel/docs/Static/index.rst @@ -0,0 +1,6 @@ +First page in the static ert's documentation! +=============================== + +Contents: +This is where we need to write the "manual" documentation + diff --git a/ThirdParty/Ert/devel/docs/build_doc.cmake b/ThirdParty/Ert/devel/docs/build_doc.cmake new file mode 100644 index 0000000000..58cea377dc --- /dev/null +++ b/ThirdParty/Ert/devel/docs/build_doc.cmake @@ -0,0 +1,6 @@ +set( ENV{PYTHONPATH} ${pbd}/python) + +execute_process(COMMAND cmake -E copy ${ccsd}/conf.py ${pbd}/tmp_doc/conf.py ) +execute_process(COMMAND cmake -E copy ${ccsd}/index.rst ${pbd}/tmp_doc/index.rst ) +execute_process(COMMAND sphinx-apidoc -e -o python ${pbd}/python WORKING_DIRECTORY ${pbd}/tmp_doc/) +execute_process(COMMAND sphinx-build -b html -d _build/doctrees . _build WORKING_DIRECTORY ${pbd}/tmp_doc/) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/docs/conf.py b/ThirdParty/Ert/devel/docs/conf.py new file mode 100644 index 0000000000..6a5780b6c9 --- /dev/null +++ b/ThirdParty/Ert/devel/docs/conf.py @@ -0,0 +1,332 @@ +# -*- coding: utf-8 -*- +# +# ert documentation build configuration file, created by +# sphinx-quickstart on Mon Aug 11 13:14:00 2014. +# +# This file is execfile()d with the current directory set to its +# containing dir. +# +# Note that not all possible configuration values are present in this +# autogenerated file. +# +# All configuration values have a default; values that are commented out +# serve to show the default. + +import sys +import os + +# If extensions (or modules to document with autodoc) are in another directory, +# add these directories to sys.path here. If the directory is relative to the +# documentation root, use os.path.abspath to make it absolute, like shown here. +#sys.path.insert(0, os.path.abspath('.')) +sys.path.insert(0, os.path.abspath('../python/python')) + +# -- General configuration ------------------------------------------------ + +# If your documentation needs a minimal Sphinx version, state it here. +#needs_sphinx = '1.0' + +# Add any Sphinx extension module names here, as strings. They can be +# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom +# ones. +extensions = [ + 'sphinx.ext.autodoc', + 'sphinx.ext.viewcode', +] + +# Add any paths that contain templates here, relative to this directory. +templates_path = ['_templates'] + +# The suffix of source filenames. +source_suffix = '.rst' + +# The encoding of source files. +#source_encoding = 'utf-8-sig' + +# The master toctree document. +master_doc = 'index' + +# General information about the project. +project = u'ert' +copyright = u'2014, Statoil ASA' + +# The version info for the project you're documenting, acts as replacement for +# |version| and |release|, also used in various other places throughout the +# built documents. +# +# The short X.Y version. +version = '1.1' +# The full version, including alpha/beta/rc tags. +release = '1.7' + +# The language for content autogenerated by Sphinx. Refer to documentation +# for a list of supported languages. +#language = None + +# There are two options for replacing |today|: either, you set today to some +# non-false value, then it is used: +#today = '' +# Else, today_fmt is used as the format for a strftime call. +#today_fmt = '%B %d, %Y' + +# List of patterns, relative to source directory, that match files and +# directories to ignore when looking for source files. +exclude_patterns = ['_build'] + +# The reST default role (used for this markup: `text`) to use for all +# documents. +#default_role = None + +# If true, '()' will be appended to :func: etc. cross-reference text. +#add_function_parentheses = True + +# If true, the current module name will be prepended to all description +# unit titles (such as .. function::). +#add_module_names = True + +# If true, sectionauthor and moduleauthor directives will be shown in the +# output. They are ignored by default. +#show_authors = False + +# The name of the Pygments (syntax highlighting) style to use. +pygments_style = 'sphinx' + +# A list of ignored prefixes for module index sorting. +#modindex_common_prefix = [] + +# If true, keep warnings as "system message" paragraphs in the built documents. +#keep_warnings = False + + +# -- Options for HTML output ---------------------------------------------- + +# The theme to use for HTML and HTML Help pages. See the documentation for +# a list of builtin themes. +html_theme = 'default' + +# Theme options are theme-specific and customize the look and feel of a theme +# further. For a list of options available for each theme, see the +# documentation. +#html_theme_options = {} + +# Add any paths that contain custom themes here, relative to this directory. +#html_theme_path = [] + +# The name for this set of Sphinx documents. If None, it defaults to +# " v documentation". +#html_title = None + +# A shorter title for the navigation bar. Default is the same as html_title. +#html_short_title = None + +# The name of an image file (relative to this directory) to place at the top +# of the sidebar. +#html_logo = None + +# The name of an image file (within the static path) to use as favicon of the +# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 +# pixels large. +#html_favicon = None + +# Add any paths that contain custom static files (such as style sheets) here, +# relative to this directory. They are copied after the builtin static files, +# so a file named "default.css" will overwrite the builtin "default.css". +html_static_path = ['_static'] + +# Add any extra paths that contain custom files (such as robots.txt or +# .htaccess) here, relative to this directory. These files are copied +# directly to the root of the documentation. +#html_extra_path = [] + +# If not '', a 'Last updated on:' timestamp is inserted at every page bottom, +# using the given strftime format. +#html_last_updated_fmt = '%b %d, %Y' + +# If true, SmartyPants will be used to convert quotes and dashes to +# typographically correct entities. +#html_use_smartypants = True + +# Custom sidebar templates, maps document names to template names. +#html_sidebars = {} + +# Additional templates that should be rendered to pages, maps page names to +# template names. +#html_additional_pages = {} + +# If false, no module index is generated. +#html_domain_indices = True + +# If false, no index is generated. +#html_use_index = True + +# If true, the index is split into individual pages for each letter. +#html_split_index = False + +# If true, links to the reST sources are added to the pages. +#html_show_sourcelink = True + +# If true, "Created using Sphinx" is shown in the HTML footer. Default is True. +#html_show_sphinx = True + +# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. +#html_show_copyright = True + +# If true, an OpenSearch description file will be output, and all pages will +# contain a tag referring to it. The value of this option must be the +# base URL from which the finished HTML is served. +#html_use_opensearch = '' + +# This is the file name suffix for HTML files (e.g. ".xhtml"). +#html_file_suffix = None + +# Output file base name for HTML help builder. +htmlhelp_basename = 'ertdoc' + + +# -- Options for LaTeX output --------------------------------------------- + +latex_elements = { +# The paper size ('letterpaper' or 'a4paper'). +#'papersize': 'letterpaper', + +# The font size ('10pt', '11pt' or '12pt'). +#'pointsize': '10pt', + +# Additional stuff for the LaTeX preamble. +#'preamble': '', +} + +# Grouping the document tree into LaTeX files. List of tuples +# (source start file, target name, title, +# author, documentclass [howto, manual, or own class]). +latex_documents = [ + ('index', 'ert.tex', u'ert Documentation', + u'Statoil ASA', 'manual'), +] + +# The name of an image file (relative to this directory) to place at the top of +# the title page. +#latex_logo = None + +# For "manual" documents, if this is true, then toplevel headings are parts, +# not chapters. +#latex_use_parts = False + +# If true, show page references after internal links. +#latex_show_pagerefs = False + +# If true, show URL addresses after external links. +#latex_show_urls = False + +# Documents to append as an appendix to all manuals. +#latex_appendices = [] + +# If false, no module index is generated. +#latex_domain_indices = True + + +# -- Options for manual page output --------------------------------------- + +# One entry per manual page. List of tuples +# (source start file, name, description, authors, manual section). +man_pages = [ + ('index', 'ert', u'ert Documentation', + [u'Statoil ASA'], 1) +] + +# If true, show URL addresses after external links. +#man_show_urls = False + + +# -- Options for Texinfo output ------------------------------------------- + +# Grouping the document tree into Texinfo files. List of tuples +# (source start file, target name, title, author, +# dir menu entry, description, category) +texinfo_documents = [ + ('index', 'ert', u'ert Documentation', + u'Statoil ASA', 'ert', 'One line description of project.', + 'Miscellaneous'), +] + +# Documents to append as an appendix to all manuals. +#texinfo_appendices = [] + +# If false, no module index is generated. +#texinfo_domain_indices = True + +# How to display URL addresses: 'footnote', 'no', or 'inline'. +#texinfo_show_urls = 'footnote' + +# If true, do not generate a @detailmenu in the "Top" node's menu. +#texinfo_no_detailmenu = False + + +# -- Options for Epub output ---------------------------------------------- + +# Bibliographic Dublin Core info. +epub_title = u'ert' +epub_author = u'Statoil ASA' +epub_publisher = u'Statoil ASA' +epub_copyright = u'2014, Statoil ASA' + +# The basename for the epub file. It defaults to the project name. +#epub_basename = u'ert' + +# The HTML theme for the epub output. Since the default themes are not optimized +# for small screen space, using the same theme for HTML and epub output is +# usually not wise. This defaults to 'epub', a theme designed to save visual +# space. +#epub_theme = 'epub' + +# The language of the text. It defaults to the language option +# or en if the language is not set. +#epub_language = '' + +# The scheme of the identifier. Typical schemes are ISBN or URL. +#epub_scheme = '' + +# The unique identifier of the text. This can be a ISBN number +# or the project homepage. +#epub_identifier = '' + +# A unique identification for the text. +#epub_uid = '' + +# A tuple containing the cover image and cover page html template filenames. +#epub_cover = () + +# A sequence of (type, uri, title) tuples for the guide element of content.opf. +#epub_guide = () + +# HTML files that should be inserted before the pages created by sphinx. +# The format is a list of tuples containing the path and title. +#epub_pre_files = [] + +# HTML files shat should be inserted after the pages created by sphinx. +# The format is a list of tuples containing the path and title. +#epub_post_files = [] + +# A list of files that should not be packed into the epub file. +epub_exclude_files = ['search.html'] + +# The depth of the table of contents in toc.ncx. +#epub_tocdepth = 3 + +# Allow duplicate toc entries. +#epub_tocdup = True + +# Choose between 'default' and 'includehidden'. +#epub_tocscope = 'default' + +# Fix unsupported image types using the PIL. +#epub_fix_images = False + +# Scale large images. +#epub_max_image_width = 0 + +# How to display URL addresses: 'footnote', 'no', or 'inline'. +#epub_show_urls = 'inline' + +# If false, no index is generated. +#epub_use_index = True diff --git a/ThirdParty/Ert/devel/docs/index.rst b/ThirdParty/Ert/devel/docs/index.rst new file mode 100644 index 0000000000..0355e90398 --- /dev/null +++ b/ThirdParty/Ert/devel/docs/index.rst @@ -0,0 +1,26 @@ +.. ert documentation master file, created by + sphinx-quickstart on Mon Aug 11 13:14:00 2014. + You can adapt this file completely to your liking, but it should at least + contain the root `toctree` directive. + +Welcome to ert's documentation! +=============================== + +Contents: + +.. toctree:: + :maxdepth: 2 + + Static/index + + python/ert + python/ert_gui + + +Indices and tables +================== + +* :ref:`genindex` +* :ref:`modindex` +* :ref:`search` + diff --git a/ThirdParty/Ert/devel/libanalysis/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/CMakeLists.txt index a21ab5641f..883682c544 100644 --- a/ThirdParty/Ert/devel/libanalysis/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/CMakeLists.txt @@ -4,11 +4,11 @@ add_subdirectory( script ) add_subdirectory( src ) add_subdirectory( modules ) +if (BUILD_TESTS) + add_subdirectory( tests ) +endif() if (BUILD_APPLICATIONS) add_subdirectory( applications ) endif() -if (BUILD_TESTS) - add_subdirectory( tests ) -endif() diff --git a/ThirdParty/Ert/devel/libanalysis/applications/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/applications/CMakeLists.txt index e989735cf4..48241603c4 100644 --- a/ThirdParty/Ert/devel/libanalysis/applications/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/applications/CMakeLists.txt @@ -5,4 +5,16 @@ if (USE_RUNPATH) add_runpath( ert_module_test ) endif() -install(TARGETS ert_module_test DESTINATION ${CMAKE_INSTALL_PREFIX}/bin) +set (destination ${CMAKE_INSTALL_PREFIX}/bin) + +install(TARGETS ert_module_test DESTINATION ${destination}) + +if (INSTALL_GROUP) + install(CODE "EXECUTE_PROCESS(COMMAND chgrp ${INSTALL_GROUP} ${destination}/ert_module_test)") + install(CODE "EXECUTE_PROCESS(COMMAND chmod g+w ${destination}/ert_module_test)") +endif() + +if (BUILD_TESTS) + ert_module_name( VAR_RML rml_enkf ${LIBRARY_OUTPUT_PATH} ) + add_test( analysis_module_test_RML ${EXECUTABLE_OUTPUT_PATH}/ert_module_test ${VAR_RML}) +endif() diff --git a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_module.h b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_module.h index 157688fe29..6ee6839e12 100644 --- a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_module.h +++ b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_module.h @@ -24,6 +24,7 @@ extern "C" { #include #include +#include /* @@ -94,13 +95,15 @@ typedef enum { matrix_type * dObs , matrix_type * E , matrix_type * D ); + void analysis_module_init_update( analysis_module_type * module , - matrix_type * S , - matrix_type * R , - matrix_type * dObs , - matrix_type * E , - matrix_type * D ); + const bool_vector_type * ens_mask , + const matrix_type * S , + const matrix_type * R , + const matrix_type * dObs , + const matrix_type * E , + const matrix_type * D ); const char * analysis_module_get_lib_name( const analysis_module_type * module); @@ -114,6 +117,7 @@ typedef enum { bool analysis_module_has_var( const analysis_module_type * module , const char * var ); double analysis_module_get_double( const analysis_module_type * module , const char * var); int analysis_module_get_int( const analysis_module_type * module , const char * var); + bool analysis_module_get_bool( const analysis_module_type * module , const char * var); void * analysis_module_get_ptr( const analysis_module_type * module , const char * var); const char * analysis_module_flag_enum_iget( int index, int * value); diff --git a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_table.h b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_table.h index b1945a92d4..3e10e6fc46 100644 --- a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_table.h +++ b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/analysis_table.h @@ -8,7 +8,7 @@ extern "C" { #include #include - +#include typedef void (analysis_updateA_ftype) (void * module_data , matrix_type * A , @@ -38,6 +38,7 @@ extern "C" { typedef void (analysis_init_update_ftype) (void * module_data, + const bool_vector_type * ens_mask , const matrix_type * S , const matrix_type * R , const matrix_type * dObs , @@ -51,6 +52,7 @@ extern "C" { typedef bool (analysis_has_var_ftype) (const void * module_data , const char * var_name); typedef int (analysis_get_int_ftype) (const void * module_data , const char * var_name ); typedef double (analysis_get_double_ftype) (const void * module_data , const char * var_name ); + typedef bool (analysis_get_bool_ftype) (const void * module_data , const char * var_name ); typedef void * (analysis_get_ptr_ftype) (const void * module_data , const char * var_name ); /*****************************************************************/ @@ -77,6 +79,7 @@ typedef struct { analysis_has_var_ftype * has_var; analysis_get_int_ftype * get_int; analysis_get_double_ftype * get_double; + analysis_get_bool_ftype * get_bool; analysis_get_ptr_ftype * get_ptr; } analysis_table_type; diff --git a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/cv_enkf.h b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/cv_enkf.h index abd043fd3d..1f5d518859 100644 --- a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/cv_enkf.h +++ b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/cv_enkf.h @@ -18,6 +18,7 @@ #include #include +#include typedef struct cv_enkf_data_struct cv_enkf_data_type; @@ -25,6 +26,7 @@ void * cv_enkf_data_alloc( rng_type * rng ); void cv_enkf_data_free( void * arg ); void cv_enkf_init_update( void * arg , + const bool_vector_type * ens_mask , const matrix_type * S , const matrix_type * R , const matrix_type * dObs , diff --git a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/enkf_linalg.h b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/enkf_linalg.h index f4bc8e0911..966e01d85d 100644 --- a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/enkf_linalg.h +++ b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/enkf_linalg.h @@ -3,6 +3,7 @@ #include #include +#include void enkf_linalg_get_PC( const matrix_type * S0, @@ -10,7 +11,8 @@ void enkf_linalg_get_PC( const matrix_type * S0, double truncation, int ncomp, matrix_type * PC, - matrix_type * PC_obs ); + matrix_type * PC_obs , + double_vector_type * singular_values); void enkf_linalg_init_stdX( matrix_type * X , @@ -96,16 +98,11 @@ void enkf_linalg_checkX(const matrix_type * X , bool bootstrap); void enkf_linalg_rml_enkfX1(matrix_type *X1, matrix_type * Udr ,matrix_type * S ,matrix_type *R); void enkf_linalg_rml_enkfX2(matrix_type *X2, double *Wdr, matrix_type * X1 ,double a , int nsign); void enkf_linalg_rml_enkfX3(matrix_type *X3, matrix_type *VdTr, double *Wdr,matrix_type *X2, int nsign); -void enkf_linalg_rml_enkfdA(matrix_type *dA1,matrix_type *Dm,matrix_type *X3); double enkf_linalg_data_mismatch(matrix_type *D , matrix_type *R , matrix_type *Sk); void enkf_linalg_Covariance(matrix_type *Cd, const matrix_type *E, double nsc ,int nrobs); -void enkf_linalg_rml_enkfAm(matrix_type * Um, double * Wm,int nsign1); +void enkf_linalg_rml_enkfAm(matrix_type * Um, const double * Wm,int nsign1); -void enkf_linalg_rml_enkfX4 (matrix_type *X4,matrix_type *Am, matrix_type *A); -void enkf_linalg_rml_enkfX5(matrix_type * X5,matrix_type * Am, matrix_type * X4); -void enkf_linalg_rml_enkfX6(matrix_type * X6, matrix_type * Dk, matrix_type * X5); void enkf_linalg_rml_enkfX7(matrix_type * X7, matrix_type * VdT, double * Wdr, double a,matrix_type * X6); -void enkf_linalg_rml_enkfXdA2(matrix_type * dA2,matrix_type * Dk,matrix_type * X7); #endif diff --git a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/std_enkf.h b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/std_enkf.h index 226e89b851..4e65de3c3d 100644 --- a/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/std_enkf.h +++ b/ThirdParty/Ert/devel/libanalysis/include/ert/analysis/std_enkf.h @@ -13,8 +13,6 @@ extern "C" { #define DEFAULT_ENKF_TRUNCATION_ 0.98 #define ENKF_TRUNCATION_KEY_ "ENKF_TRUNCATION" #define ENKF_NCOMP_KEY_ "ENKF_NCOMP" -#define ENKF_LAMBDA0_KEY_ "LAMBDA0" -#define ENKF_ITER_KEY_ "ITER" typedef struct std_enkf_data_struct std_enkf_data_type; @@ -27,7 +25,9 @@ extern "C" { void std_enkf_set_truncation( std_enkf_data_type * data , double truncation ); void std_enkf_set_subspace_dimension( std_enkf_data_type * data , int subspace_dimension); void std_enkf_set_lambda0( std_enkf_data_type * data , double lambda0 ); - + bool std_enkf_has_var( const void * arg, const char * var_name); + int std_enkf_get_int( const void * arg, const char * var_name); + double std_enkf_get_double( const void * arg, const char * var_name); double std_enkf_get_truncation( std_enkf_data_type * data ); void * std_enkf_data_alloc( rng_type * rng); diff --git a/ThirdParty/Ert/devel/libanalysis/modules/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/modules/CMakeLists.txt index bb54f40ec4..3e9cb584ae 100644 --- a/ThirdParty/Ert/devel/libanalysis/modules/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/modules/CMakeLists.txt @@ -1,12 +1,43 @@ -set( args "--silent --exclude-ert -I${PROJECT_SOURCE_DIR}/libanalysis/include -I${PROJECT_SOURCE_DIR}/libert_util/include -I${CMAKE_CURRENT_SOURCE_DIR} -I${PROJECT_BINARY_DIR}/libert_util/include") +include_directories(${CMAKE_CURRENT_SOURCE_DIR}) -set( RML_SOURCE_FILES - rml_enkf.c +set( RML_SOURCE_FILES + rml_enkf.c rml_enkf_common.c ) -set( RMLI_SOURCE_FILES - rml_enkf_imodel.c - rml_enkf_common.c ) +set( header_files analysis_module.h enkf_linalg.h analysis_table.h std_enkf.h rml_enkf_common.h) +add_library( rml_enkf SHARED ${RML_SOURCE_FILES} ) + +set_target_properties( rml_enkf PROPERTIES VERSION 1.0 SOVERSION 1.0 PREFIX "") + +target_link_libraries( rml_enkf analysis ) +target_link_libraries( rml_enkf dl ) + +if (USE_RUNPATH) + add_runpath( rml_enkf ) +endif() + +if (BUILD_TESTS) + add_subdirectory( tests ) +endif() + +if (INSTALL_ERT) + install(TARGETS rml_enkf DESTINATION ${CMAKE_INSTALL_LIBDIR}) +endif() + + +#----------------------------------------------------------------- + +# Alternative script based build: +#if (BUILD_TESTS) +# if (BUILD_APPLICATIONS) +#set( args "--silent --exclude-ert -I${PROJECT_SOURCE_DIR}/libanalysis/include -I${PROJECT_SOURCE_DIR}/libert_util/include -I${CMAKE_CURRENT_SOURCE_DIR} -I${PROJECT_BINARY_DIR}/libert_util/include") + + +#set( RML_SOURCE_FILES +# rml_enkf.c +# rml_enkf_common.c ) + +#ert_module( ${LIBRARY_OUTPUT_PATH}/rml_enkf ${args} "${RML_SOURCE_FILES}") + + -ert_module( ${LIBRARY_OUTPUT_PATH}/rml_enkf ${args} "${RML_SOURCE_FILES}") -ert_module( ${LIBRARY_OUTPUT_PATH}/rmli_enkf ${args} "${RMLI_SOURCE_FILES}") diff --git a/ThirdParty/Ert/devel/libanalysis/modules/deprecated/rml_enkf.c b/ThirdParty/Ert/devel/libanalysis/modules/deprecated/rml_enkf.c new file mode 100644 index 0000000000..d86ca89341 --- /dev/null +++ b/ThirdParty/Ert/devel/libanalysis/modules/deprecated/rml_enkf.c @@ -0,0 +1,427 @@ +/* + Copyright (C) 2011 Statoil ASA, Norway. + + The file 'rml_enkf.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include + +#include +#include +#include +#include +#include +#include + +#include +#include +#include +#include + +#include + +/* + A random 'magic' integer id which is used for run-time type checking + of the input data. +*/ +#define RML_ENKF_TYPE_ID 261123 + + + + +/* + Observe that only one of the settings subspace_dimension and + truncation can be valid at a time; otherwise the svd routine will + fail. This implies that the set_truncation() and + set_subspace_dimension() routines will set one variable, AND + INVALIDATE THE OTHER. For most situations this will be OK, but if + you have repeated calls to both of these functions the end result + might be a surprise. +*/ +#define INVALID_SUBSPACE_DIMENSION -1 +#define INVALID_TRUNCATION -1 +#define DEFAULT_SUBSPACE_DIMENSION INVALID_SUBSPACE_DIMENSION + + + + + +/* + The configuration data used by the rml_enkf module is contained in a + rml_enkf_data_struct instance. The data type used for the rml_enkf + module is quite simple; with only a few scalar variables, but there + are essentially no limits to what you can pack into such a datatype. + + All the functions in the module have a void pointer as the first + argument, this will immediately be casted to a rml_enkf_data_type + instance, to get some type safety the UTIL_TYPE_ID system should be + used (see documentation in util.h) + + The data structure holding the data for your analysis module should + be created and initialized by a constructor, which should be + registered with the '.alloc' element of the analysis table; in the + same manner the desctruction of this data should be handled by a + destructor or free() function registered with the .freef field of + the analysis table. +*/ + + +typedef struct rml_enkf_data_struct rml_enkf_data_type; + +struct rml_enkf_data_struct { + UTIL_TYPE_ID_DECLARATION; + double truncation; // Controlled by config key: ENKF_TRUNCATION_KEY + int subspace_dimension; // Controlled by config key: ENKF_NCOMP_KEY (-1: use Truncation instead) + long option_flags; + + int iteration_nr; // Keep track of the outer iteration loop + double lambda; // parameter to control the search direction in Marquardt levenberg optimization + double lambda0; // Initial lambda value + double Sk; // Objective function value + double Std; // Standard Deviation of the Objective function + matrix_type *state; + bool_vector_type * ens_mask; +}; + + +/* + This is a macro which will expand to generate a function: + + rml_enkf_data_type * rml_enkf_data_safe_cast( void * arg ) {} + + which is used for runtime type checking of all the functions which + accept a void pointer as first argument. +*/ +static UTIL_SAFE_CAST_FUNCTION( rml_enkf_data , RML_ENKF_TYPE_ID ) +static UTIL_SAFE_CAST_FUNCTION_CONST( rml_enkf_data , RML_ENKF_TYPE_ID ) + + +double rml_enkf_get_truncation( rml_enkf_data_type * data ) { + return data->truncation; +} + +int rml_enkf_get_subspace_dimension( rml_enkf_data_type * data ) { + return data->subspace_dimension; +} + +void rml_enkf_set_truncation( rml_enkf_data_type * data , double truncation ) { + data->truncation = truncation; + if (truncation > 0.0) + data->subspace_dimension = INVALID_SUBSPACE_DIMENSION; +} + +void rml_enkf_set_lambda0(rml_enkf_data_type * data , double lambda0 ) { + data->lambda0 = lambda0; +} + +void rml_enkf_set_subspace_dimension( rml_enkf_data_type * data , int subspace_dimension) { + data->subspace_dimension = subspace_dimension; + if (subspace_dimension > 0) + data->truncation = INVALID_TRUNCATION; +} + +void rml_enkf_set_iteration_number( rml_enkf_data_type *data , int iteration_number ) { + data->iteration_nr = iteration_number; +} + + +void * rml_enkf_data_alloc( rng_type * rng) { + rml_enkf_data_type * data = util_malloc( sizeof * data ); + UTIL_TYPE_ID_INIT( data , RML_ENKF_TYPE_ID ); + + rml_enkf_set_truncation( data , DEFAULT_ENKF_TRUNCATION_ ); + rml_enkf_set_subspace_dimension( data , DEFAULT_SUBSPACE_DIMENSION ); + data->option_flags = ANALYSIS_NEED_ED + ANALYSIS_UPDATE_A + ANALYSIS_ITERABLE + ANALYSIS_SCALE_DATA; + data->iteration_nr = 0; + data->Std = 0; + data->state = matrix_alloc(1,1); // This will be resized under use; but we need a valid instance + data->lambda0 = -1.0; + data->ens_mask = bool_vector_alloc(0,false); + return data; +} + + +void rml_enkf_data_free( void * module_data ) { + rml_enkf_data_type * data = rml_enkf_data_safe_cast( module_data ); + matrix_free( data->state ); + bool_vector_free(data->ens_mask); + free( data ); +} + + + + + +/* + About the matrix Cd: The matrix Cd is calculated based on the content + of the E input matrix. In the original implementation this matrix was + only calculated in the first iteration, and then reused between subsequent + iterations. + + Due to deactivating outliers the number of active observations can change + from one iteration to the next, if the matrix Cd is then reused between + iterations we will get a matrix size mismatch in the linear algebra. In the + current implementation the Cd matrix is recalculated based on the E input + for each iteration. + */ + +void rml_enkf_updateA(void * module_data , + matrix_type * A , + matrix_type * S , + matrix_type * R , + matrix_type * dObs , + matrix_type * E , + matrix_type * D) { + + + rml_enkf_data_type * data = rml_enkf_data_safe_cast( module_data ); + double truncation = data->truncation; + double Sk_new; + double Std_new; + + int ens_size = matrix_get_columns( S ); + int nrobs = matrix_get_rows( S ); + matrix_type * Cd = matrix_alloc( nrobs , nrobs); + double nsc = 1/sqrt(ens_size-1); + matrix_type * Skm = matrix_alloc(matrix_get_columns(D),matrix_get_columns(D)); + FILE *fp = util_fopen("rml_enkf_output","a"); + + int nrmin = util_int_min( ens_size , nrobs); + matrix_type * Ud = matrix_alloc( nrobs , nrmin ); /* Left singular vectors. */ + matrix_type * VdT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ + double * Wd = util_calloc( nrmin , sizeof * Wd ); + + + Cd = matrix_alloc( nrobs, nrobs ); + enkf_linalg_Covariance(Cd ,E ,nsc, nrobs); + matrix_inv(Cd); + + if (data->iteration_nr == 0) { + Sk_new = enkf_linalg_data_mismatch(D,Cd,Skm); //Calculate the intitial data mismatch term + Std_new = matrix_diag_std(Skm,Sk_new); + rml_enkf_common_store_state( data->state , A , data->ens_mask ); + + + + if (data->lambda0 < 0) + data->lambda = pow(10,floor(log10(Sk_new/(2*nrobs)))); + else + data->lambda = data->lambda0; + + rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); + data->Sk = Sk_new; + data->Std = Std_new; + printf("Prior Objective function value is %5.3f \n", data->Sk); + + fprintf(fp,"Iteration number\t Lamda Value \t Current Mean (OB FN) \t Old Mean\t Current Stddev\n"); + fprintf(fp, "\n\n"); + fprintf(fp,"%d \t\t NA \t %5.5f \t \t %5.5f \n",data->iteration_nr, Sk_new, Std_new); + + } else { + Sk_new = enkf_linalg_data_mismatch(D , Cd , Skm); //Calculate the intitial data mismatch term + Std_new= matrix_diag_std(Skm,Sk_new); + printf(" Current Objective function value is %5.3f \n\n",Sk_new); + printf("The old Objective function value is %5.3f \n", data->Sk); + + + if ((Sk_new< (data->Sk)) && (Std_new< (data->Std))) + { + if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! + data-> iteration_nr = 16; + + + fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); + data->lambda = data->lambda / 10 ; + data->Std = Std_new; + + rml_enkf_common_store_state( data->state , A , data->ens_mask ); + + data->Sk = Sk_new; + rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); + } + else if((Sk_new< (data->Sk)) && (Std_new > (data->Std))) + { + if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! + data-> iteration_nr = 16; + + + fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); + data->Std=Std_new; + + rml_enkf_common_store_state( data->state , A , data->ens_mask ); + + data->Sk = Sk_new; + rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); + } + else { + fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); + printf("The previous step is rejected !!\n"); + data->lambda = data ->lambda * 4; + + rml_enkf_common_recover_state( data->state , A , data->ens_mask ); + + rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); + data->iteration_nr--; + } + } + data->iteration_nr++; + + // setting the lower bound for lambda + if (data->lambda <.01) + data->lambda= .01; + + + printf ("The current iteration number is %d \n ", data->iteration_nr); + + + matrix_free(Cd); + matrix_free(Ud); + matrix_free(VdT); + matrix_free(Skm); + free(Wd); + fclose(fp); +} + + +void rml_enkf_init_update(void * arg , + const bool_vector_type * ens_mask , + const matrix_type * S , + const matrix_type * R , + const matrix_type * dObs , + const matrix_type * E , + const matrix_type * D ) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + bool_vector_memcpy( module_data->ens_mask , ens_mask ); +} + + + +bool rml_enkf_set_double( void * arg , const char * var_name , double value) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + { + bool name_recognized = true; + + if (strcmp( var_name , ENKF_TRUNCATION_KEY_) == 0) + rml_enkf_set_truncation( module_data , value ); + else if (strcmp( var_name , ENKF_LAMBDA0_KEY_) == 0) + rml_enkf_set_lambda0( module_data , value ); + else + name_recognized = false; + + return name_recognized; + } +} + + +bool rml_enkf_set_int( void * arg , const char * var_name , int value) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + { + bool name_recognized = true; + + if (strcmp( var_name , ENKF_NCOMP_KEY_) == 0) + rml_enkf_set_subspace_dimension( module_data , value ); + else if(strcmp( var_name , ENKF_ITER_KEY_) == 0) + rml_enkf_set_iteration_number( module_data , value ); + else + name_recognized = false; + + return name_recognized; + } +} + + +long rml_enkf_get_options( void * arg , long flag ) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + { + return module_data->option_flags; + } +} + + + + bool rml_enkf_has_var( const void * arg, const char * var_name) { + bool ret = false; + + if ((strcmp(var_name , ENKF_ITER_KEY_) == 0) || + (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) || + (strcmp(var_name , ENKF_LAMBDA0_KEY_) == 0)) { + ret = true; + } + return ret; + } + + + + + int rml_enkf_get_int( const void * arg, const char * var_name) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_ITER_KEY_) == 0) + return module_data->iteration_nr; + else + return -1; + } + } + + double rml_enkf_get_double( const void * arg, const char * var_name) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return module_data->truncation; + else if (strcmp(var_name , ENKF_LAMBDA0_KEY_) == 0) + return module_data->lambda0; + else + return -1.0; + } + } + + + + +/** + gcc -fpic -c -I?? + gcc -shared -o +*/ + + + +#ifdef INTERNAL_LINK +#define SYMBOL_TABLE rml_enkf_symbol_table +#else +#define SYMBOL_TABLE EXTERNAL_MODULE_SYMBOL +#endif + + +analysis_table_type SYMBOL_TABLE = { + .alloc = rml_enkf_data_alloc, + .freef = rml_enkf_data_free, + .set_int = rml_enkf_set_int , + .set_double = rml_enkf_set_double , + .set_bool = NULL , + .set_string = NULL , + .get_options = rml_enkf_get_options , + .initX = NULL, + .updateA = rml_enkf_updateA , + .init_update = rml_enkf_init_update , + .complete_update = NULL, + .has_var = rml_enkf_has_var, + .get_int = rml_enkf_get_int, + .get_double = rml_enkf_get_double, + .get_ptr = NULL, +}; + diff --git a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf.c b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf.c index 340d33c3d2..2b83ece1db 100644 --- a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf.c @@ -13,19 +13,21 @@ FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License at - for more details. + for more details. */ -#include -#include -#include + #include +#include +#include +#include -#include #include +#include #include #include #include +#include #include #include @@ -34,15 +36,13 @@ #include -/* - A random 'magic' integer id which is used for run-time type checking - of the input data. -*/ -#define RML_ENKF_TYPE_ID 261123 - +typedef struct rml_enkf_data_struct rml_enkf_data_type; +//********************************************** +// DEFAULT PARAMS +//********************************************** /* Observe that only one of the settings subspace_dimension and truncation can be valid at a time; otherwise the svd routine will @@ -52,14 +52,39 @@ you have repeated calls to both of these functions the end result might be a surprise. */ -#define INVALID_SUBSPACE_DIMENSION -1 -#define INVALID_TRUNCATION -1 -#define DEFAULT_SUBSPACE_DIMENSION INVALID_SUBSPACE_DIMENSION +#define INVALID_SUBSPACE_DIMENSION -1 +#define INVALID_TRUNCATION -1 +#define DEFAULT_SUBSPACE_DIMENSION INVALID_SUBSPACE_DIMENSION +#define DEFAULT_USE_PRIOR true +#define DEFAULT_LAMBDA_INCREASE_FACTOR 4 +#define DEFAULT_LAMBDA_REDUCE_FACTOR 0.1 +#define DEFAULT_LAMBDA0 -1 +#define DEFAULT_LAMBDA_MIN 0.01 +#define DEFAULT_LAMBDA_RECALCULATE false +#define DEFAULT_LOG_FILE "rml_enkf.out" +#define DEFAULT_CLEAR_LOG true + + +#define USE_PRIOR_KEY "USE_PRIOR" +#define LAMBDA_REDUCE_FACTOR_KEY "LAMBDA_REDUCE" +#define LAMBDA_INCREASE_FACTOR_KEY "LAMBDA_INCREASE" +#define LAMBDA0_KEY "LAMBDA0" +#define LAMBDA_MIN_KEY "LAMBDA_MIN" +#define LAMBDA_RECALCULATE_KEY "LAMBDA_RECALCULATE" +#define ITER_KEY "ITER" +#define LOG_FILE_KEY "LOG_FILE" +#define CLEAR_LOG_KEY "CLEAR_LOG" +#define RML_ENKF_TYPE_ID 261123 + + +//********************************************** +// RML "object" data definition +//********************************************** /* The configuration data used by the rml_enkf module is contained in a rml_enkf_data_struct instance. The data type used for the rml_enkf @@ -78,37 +103,47 @@ destructor or free() function registered with the .freef field of the analysis table. */ - - -typedef struct rml_enkf_data_struct rml_enkf_data_type; - struct rml_enkf_data_struct { UTIL_TYPE_ID_DECLARATION; double truncation; // Controlled by config key: ENKF_TRUNCATION_KEY int subspace_dimension; // Controlled by config key: ENKF_NCOMP_KEY (-1: use Truncation instead) long option_flags; - int iteration_nr; // Keep track of the outer iteration loop - double lambda; // parameter to control the search direction in Marquardt levenberg optimization - double lambda0; // Initial lambda value double Sk; // Objective function value double Std; // Standard Deviation of the Objective function - matrix_type *state; -}; + double * Csc; // Vector with scalings for non-dimensionalizing states + matrix_type *Am; // Scaled right singular vectors of ensemble anomalies. + matrix_type *prior; // m_pr + matrix_type *state; // m_l + bool_vector_type * ens_mask; // Tells you which of the realisations are in use. + bool use_prior; // Use exact/approximate scheme? Approximate scheme drops the "prior" term in the LM step. + + double lambda; // parameter to control the setp length in Marquardt levenberg optimization + double lambda0; + double lambda_min; + double lambda_reduce_factor; + double lambda_increase_factor; + bool lambda_recalculate; + + bool clear_log; + char * log_file; + FILE * log_stream; +}; -/* - This is a macro which will expand to generate a function: - rml_enkf_data_type * rml_enkf_data_safe_cast( void * arg ) {} - which is used for runtime type checking of all the functions which - accept a void pointer as first argument. -*/ static UTIL_SAFE_CAST_FUNCTION( rml_enkf_data , RML_ENKF_TYPE_ID ) static UTIL_SAFE_CAST_FUNCTION_CONST( rml_enkf_data , RML_ENKF_TYPE_ID ) + + + + +//********************************************** +// Set / Get +//********************************************** double rml_enkf_get_truncation( rml_enkf_data_type * data ) { return data->truncation; } @@ -123,8 +158,48 @@ void rml_enkf_set_truncation( rml_enkf_data_type * data , double truncation ) { data->subspace_dimension = INVALID_SUBSPACE_DIMENSION; } -void rml_enkf_set_lambda0(rml_enkf_data_type * data , double lambda0 ) { - data->lambda0 = lambda0; +void rml_enkf_set_lambda0( rml_enkf_data_type * data , double lambda0) { + data->lambda0 = lambda0; +} + +double rml_enkf_get_lambda0( const rml_enkf_data_type * data ) { + return data->lambda0; +} + +void rml_enkf_set_lambda_min( rml_enkf_data_type * data , double lambda_min) { + data->lambda_min = lambda_min; +} + +double rml_enkf_get_lambda_min( const rml_enkf_data_type * data ) { + return data->lambda_min; +} + +void rml_enkf_set_lambda_increase_factor( rml_enkf_data_type * data , double increase_factor) { + data->lambda_increase_factor = increase_factor; +} + +double rml_enkf_get_lambda_increase_factor( const rml_enkf_data_type * data ) { + return data->lambda_increase_factor; +} + +void rml_enkf_set_lambda_reduce_factor( rml_enkf_data_type * data , double reduce_factor) { + data->lambda_reduce_factor = reduce_factor; +} + +double rml_enkf_get_lambda_reduce_factor( const rml_enkf_data_type * data ) { + return data->lambda_reduce_factor; +} + +bool rml_enkf_get_use_prior( const rml_enkf_data_type * data ) { + return data->use_prior; +} + +void rml_enkf_set_use_prior( rml_enkf_data_type * data , bool use_prior) { + data->use_prior = use_prior; +} + +void rml_enkf_set_lambda_recalculate( rml_enkf_data_type * data , bool lambda_recalculate) { + data->lambda_recalculate = lambda_recalculate; } void rml_enkf_set_subspace_dimension( rml_enkf_data_type * data , int subspace_dimension) { @@ -133,32 +208,128 @@ void rml_enkf_set_subspace_dimension( rml_enkf_data_type * data , int subspace_d data->truncation = INVALID_TRUNCATION; } -void rml_enkf_set_iteration_number( rml_enkf_data_type *data , int iteration_number ) { - data->iteration_nr = iteration_number; +void rml_enkf_set_iteration_nr( rml_enkf_data_type * data , int iteration_nr) { + data->iteration_nr = iteration_nr; +} + +int rml_enkf_get_iteration_nr( const rml_enkf_data_type * data ) { + return data->iteration_nr; } + + + +//********************************************** +// Log-file related stuff +//********************************************** +bool rml_enkf_get_clear_log( const rml_enkf_data_type * data ) { + return data->clear_log; +} + +void rml_enkf_set_clear_log( rml_enkf_data_type * data , bool clear_log) { + data->clear_log = clear_log; +} + +void rml_enkf_set_log_file( rml_enkf_data_type * data , const char * log_file ) { + data->log_file = util_realloc_string_copy( data->log_file , log_file ); +} + +const char * rml_enkf_get_log_file( const rml_enkf_data_type * data) { + return data->log_file; +} + +void rml_enkf_log_line( rml_enkf_data_type * data , const char * fmt , ...) { + if (data->log_stream) { + va_list ap; + va_start(ap , fmt); + vfprintf( data->log_stream , fmt , ap ); + va_end( ap ); + } +} + +static void rml_enkf_write_log_header( rml_enkf_data_type * data, const char * format) { + if (data->log_stream) { + const char * column1 = "Iter#"; + const char * column2 = "Lambda"; + const char * column3 = "Sk old"; + const char * column4 = "Sk_new"; + const char * column5 = "std(Sk)"; + + rml_enkf_log_line(data, format, column1, column2, column3, column4, column5); + } +} + +static void rml_enkf_write_iter_info( rml_enkf_data_type * data , double Sk_new, double Std_new ) { + if (data->log_stream) { + + const char * format = "\n%2d-->%-2d %-7.3f %-7.3f --> %-7.3f %-7.3f"; + const char * format_headers = "\n%-7s %-7s %-7s --> %-7s %-7s"; + + static int has_printed_header = 0; + if (!has_printed_header) { + rml_enkf_write_log_header( data, format_headers ); + has_printed_header = 1; + } + + rml_enkf_log_line( data , format, data->iteration_nr, data->iteration_nr+1, data->lambda, data->Sk, Sk_new, Std_new); + } +} + +static void rml_enkf_open_log_file( rml_enkf_data_type * data ) { + data->log_stream = NULL; + if (data->log_file) { + if ( data->iteration_nr == 0) { + if (data->clear_log){ + data->log_stream = util_mkdir_fopen( data->log_file , "w"); + } + else + data->log_stream = util_mkdir_fopen( data->log_file , "a"); + } else + data->log_stream = util_fopen( data->log_file , "a"); + } +} + + + + +//********************************************** +// Memory +//********************************************** void * rml_enkf_data_alloc( rng_type * rng) { - rml_enkf_data_type * data = util_malloc( sizeof * data ); + rml_enkf_data_type * data = util_malloc( sizeof * data); UTIL_TYPE_ID_INIT( data , RML_ENKF_TYPE_ID ); - + + data->log_file = NULL; + rml_enkf_set_truncation( data , DEFAULT_ENKF_TRUNCATION_ ); rml_enkf_set_subspace_dimension( data , DEFAULT_SUBSPACE_DIMENSION ); + rml_enkf_set_use_prior( data , DEFAULT_USE_PRIOR ); + rml_enkf_set_lambda0( data , DEFAULT_LAMBDA0 ); + rml_enkf_set_lambda_increase_factor(data , DEFAULT_LAMBDA_INCREASE_FACTOR); + rml_enkf_set_lambda_reduce_factor(data , DEFAULT_LAMBDA_REDUCE_FACTOR); + rml_enkf_set_lambda_min( data , DEFAULT_LAMBDA_MIN ); + rml_enkf_set_log_file( data , DEFAULT_LOG_FILE ); + rml_enkf_set_clear_log( data , DEFAULT_CLEAR_LOG ); + rml_enkf_set_lambda_recalculate( data , DEFAULT_LAMBDA_RECALCULATE ); + data->option_flags = ANALYSIS_NEED_ED + ANALYSIS_UPDATE_A + ANALYSIS_ITERABLE + ANALYSIS_SCALE_DATA; data->iteration_nr = 0; data->Std = 0; - data->state = NULL; - data->lambda0 = -1.0; + data->ens_mask = bool_vector_alloc(0,false); + data->state = matrix_alloc(1,1); + data->prior = matrix_alloc(1,1); return data; } +void rml_enkf_data_free( void * arg ) { + rml_enkf_data_type * data = rml_enkf_data_safe_cast( arg ); -void rml_enkf_data_free( void * module_data ) { - rml_enkf_data_type * data = rml_enkf_data_safe_cast( module_data ); - - if (data->state != NULL) - matrix_free( data->state ); + matrix_free( data->state ); + matrix_free( data->prior ); + util_safe_free( data->log_file ); + bool_vector_free( data->ens_mask ); free( data ); } @@ -166,131 +337,446 @@ void rml_enkf_data_free( void * module_data ) { +//********************************************** +// Notation +//********************************************** /* - About the matrix Cd: The matrix Cd is calculated based on the content - of the E input matrix. In the original implementation this matrix was - only calculated in the first iteration, and then reused between subsequent - iterations. - - Due to deactivating outliers the number of active observations can change - from one iteration to the next, if the matrix Cd is then reused between - iterations we will get a matrix size mismatch in the linear algebra. In the - current implementation the Cd matrix is recalculated based on the E input - for each iteration. - */ - -void rml_enkf_updateA(void * module_data , - matrix_type * A , - matrix_type * S , - matrix_type * R , - matrix_type * dObs , - matrix_type * E , - matrix_type * D) { + * X1-X7, intermediate calculations in iterations. See D.Oliver algorithm + * + * Variable name in code <-> D.Oliver notation <-> Description + * ------------------------------------------------------------------------------------------------------------- + * A <-> m_l <-> Ensemble matrix. Updated in-place by iterations. + * data->state <-> m_(l-1) <-> "A" from the previous iteration. Backs up A in case the update is bad. + * data->prior <-> <-> Previously: "active_prior". Stores A from before iter0, i.e. the actual prior. + * Acopy <-> <-> Eliminated from code. Copy of A (at each iteration, before acceptance/rejection decision) + * data->prior0 <-> m_pr <-> Eliminated from code. Same as prior, but also includes columns (j) for which ens_mask[j]==false. + * Seems pointless. Only creates confusion. + * + * Am <-> A_m <-> Am = Um*Wm^(-1) + * Csc <-> C_sc^(1/2) <-> State scalings. Note the square root. + * Dm (in init1__) <-> Delta m <-> Anomalies of prior wrt. its mean (row i scaled by 1/(Csc[i]*sqrt(N-1))) + * Dm (in initA__) <-> Csc * Delta m <-> Anomalies of A wrt. its mean (only scaled by 1/sqrt(N-1)) + * Dk1 (in init2__) <-> Delta m <-> Anomailes of A (row i scaled by 1/(Csc[i]*sqrt(N-1))) + * Dk (in init2__) <-> C_sc^(-1) * (m - m_pr ) <-> Anomalies wrt. prior (as opposed to the mean; only scaled by Csc) + * dA1 (in initA__) <-> delta m_1 <-> Ensemble updates coming from data mismatch + * dA2 (in init2__) <-> delta m_2 <-> Ensemble updates coming from prior mismatch +*/ - rml_enkf_data_type * data = rml_enkf_data_safe_cast( module_data ); - double truncation = data->truncation; - double Sk_new; - double Std_new; + + +//********************************************** +// Actual Algorithm, called through updateA() +//********************************************** + +// Just (pre)calculates data->Am = Um*Wm^(-1). +static void rml_enkf_init1__( rml_enkf_data_type * data) { + // Differentiate this routine from init2__, which actually calculates the prior mismatch update. + // This routine does not change any ensemble matrix. + // Um*Wm^(-1) are the scaled, truncated, right singular vectors of data->prior - int ens_size = matrix_get_columns( S ); - int nrobs = matrix_get_rows( S ); - matrix_type * Cd = matrix_alloc( nrobs , nrobs); - double nsc = 1/sqrt(ens_size-1); - matrix_type * Skm = matrix_alloc(matrix_get_columns(D),matrix_get_columns(D)); - FILE *fp = util_fopen("rml_enkf_output","a"); - int nrmin = util_int_min( ens_size , nrobs); - matrix_type * Ud = matrix_alloc( nrobs , nrmin ); /* Left singular vectors. */ - matrix_type * VdT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ - double * Wd = util_calloc( nrmin , sizeof * Wd ); + int state_size = matrix_get_rows( data->prior ); + int ens_size = matrix_get_columns( data->prior ); + int nrmin = util_int_min( ens_size , state_size); + matrix_type * Dm = matrix_alloc_copy( data->prior ); + matrix_type * Um = matrix_alloc( state_size , nrmin ); /* Left singular vectors. */ + matrix_type * VmT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ + double * Wm = util_calloc( nrmin , sizeof * Wm ); + double nsc = 1/sqrt(ens_size - 1); + + matrix_subtract_row_mean(Dm); + + for (int i=0; i < state_size; i++){ + double sc = nsc / (data->Csc[i]); + matrix_scale_row( Dm , i , sc); + } + + // Um Wm VmT = Dm; nsign1 = num of non-zero singular values. + int nsign1 = enkf_linalg_svd_truncation(Dm , data->truncation , -1 , DGESVD_MIN_RETURN , Wm , Um , VmT); + // Am = Um*Wm^(-1). I.e. scale *columns* of Um + enkf_linalg_rml_enkfAm(Um, Wm, nsign1); + + data->Am = matrix_alloc_copy( Um ); + matrix_free(Um); + matrix_free(VmT); + matrix_free(Dm); + free(Wm); +} - Cd = matrix_alloc( nrobs, nrobs ); - enkf_linalg_Covariance(Cd ,E ,nsc, nrobs); - matrix_inv(Cd); +// Creates state scaling matrix +void rml_enkf_init_Csc(rml_enkf_data_type * data){ + // This seems a strange choice of scaling matrix. Review? + + int state_size = matrix_get_rows( data->prior ); + int ens_size = matrix_get_columns( data->prior ); - if (data->iteration_nr == 0) { - Sk_new = enkf_linalg_data_mismatch(D,Cd,Skm); //Calculate the intitial data mismatch term - Std_new = matrix_diag_std(Skm,Sk_new); - data->state = matrix_realloc_copy(data->state , A); - - if (data->lambda0 < 0) - data->lambda = pow(10,floor(log10(Sk_new/(2*nrobs)))); + for (int row=0; row < state_size; row++) { + double sumrow = matrix_get_row_sum(data->prior , row); + double tmp = sumrow / ens_size; + + if (abs(tmp)< 1) + data->Csc[row] = 0.05; else - data->lambda = data->lambda0; - - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); - data->Sk = Sk_new; - data->Std = Std_new; - printf("Prior Objective function value is %5.3f \n", data->Sk); - - fprintf(fp,"Iteration number\t Lamda Value \t Current Mean (OB FN) \t Old Mean\t Current Stddev\n"); - fprintf(fp, "\n\n"); - fprintf(fp,"%d \t\t NA \t %5.5f \t \t %5.5f \n",data->iteration_nr, Sk_new, Std_new); - - } else { - Sk_new = enkf_linalg_data_mismatch(D , Cd , Skm); //Calculate the intitial data mismatch term - Std_new= matrix_diag_std(Skm,Sk_new); - printf(" Current Objective function value is %5.3f \n\n",Sk_new); - printf("The old Objective function value is %5.3f \n", data->Sk); + data->Csc[row] = 1.00; + } +} - if ((Sk_new< (data->Sk)) && (Std_new< (data->Std))) - { - if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! - data-> iteration_nr = 16; +// Calculates update from data mismatch (delta m_1). Also provides SVD for later use. +static void rml_enkf_initA__(rml_enkf_data_type * data, matrix_type * A, matrix_type * S, matrix_type * Cd, matrix_type * E, matrix_type * D, matrix_type * Udr, double * Wdr, matrix_type * VdTr) { + int ens_size = matrix_get_columns( S ); + double nsc = 1/sqrt(ens_size-1); + int nsign; - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); - data->lambda = data->lambda / 10 ; - data->Std = Std_new; - data->state = matrix_realloc_copy(data->state , A); - data->Sk = Sk_new; - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); + // Perform SVD of tmp, where: tmp = diag_sqrt(Cd^(-1)) * centered(S) / sqrt(N-1) = Ud * Wd * Vd(T) + { + int nrobs = matrix_get_rows( S ); + matrix_type *tmp = matrix_alloc (nrobs, ens_size); + matrix_subtract_row_mean( S ); // Center S + matrix_inplace_diag_sqrt(Cd); // Assumes that Cd is diag! + matrix_matmul(tmp , Cd , S ); // + matrix_scale(tmp , nsc); // + + nsign = enkf_linalg_svd_truncation(tmp , data->truncation , -1 , DGESVD_MIN_RETURN , Wdr , Udr , VdTr); + matrix_free( tmp ); + } + + // Calc X3 + { + matrix_type * X3 = matrix_alloc( ens_size, ens_size ); + { + matrix_type * X1 = matrix_alloc( nsign, ens_size); + matrix_type * X2 = matrix_alloc( nsign, ens_size ); + + + // See LM-EnRML algorithm in Oliver'2013 (Comp. Geo.) for meaning + enkf_linalg_rml_enkfX1(X1, Udr ,D ,Cd ); // X1 = Ud(T)*Cd(-1/2)*D -- D= -(dk-d0) + enkf_linalg_rml_enkfX2(X2, Wdr ,X1 ,data->lambda + 1 , nsign); // X2 = ((a*Ipd)+Wd^2)^-1 * X1 + enkf_linalg_rml_enkfX3(X3, VdTr ,Wdr,X2, nsign); // X3 = Vd *Wd*X2 + + matrix_free(X2); + matrix_free(X1); } - else if((Sk_new< (data->Sk)) && (Std_new > (data->Std))) + + // Update A { - if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! - data-> iteration_nr = 16; + matrix_type * dA1 = matrix_alloc( matrix_get_rows(A) , ens_size); + matrix_type * Dm = matrix_alloc_copy( A ); + matrix_subtract_row_mean( Dm ); /* Remove the mean from the ensemble of model parameters*/ + matrix_scale(Dm, nsc); - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); - data->Std=Std_new; - data->state = matrix_realloc_copy(data->state , A); - data->Sk = Sk_new; - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); - } - else { - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lambda, Sk_new,data->Sk, Std_new); - printf("The previous step is rejected !!\n"); - data->lambda = data ->lambda * 4; - matrix_assign( A , data->state ); - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lambda,Ud,Wd,VdT); - data->iteration_nr--; - } + matrix_matmul(dA1, Dm , X3); + matrix_inplace_add(A,dA1); // dA + + matrix_free(Dm); + matrix_free(dA1); } - data->iteration_nr++; + matrix_free(X3); + + } +} + +// Calculate prior mismatch update (delta m_2). +void rml_enkf_init2__( rml_enkf_data_type * data, matrix_type *A, double * Wdr, matrix_type * VdTr) { + // Distinguish from init1__ which only makes preparations, and is only called at iter=0 + - // setting the lower bound for lambda - if (data->lambda <.01) - data->lambda= .01; + int state_size = matrix_get_rows( A ); + int ens_size = matrix_get_columns( A ); + double nsc = 1/sqrt(ens_size-1); + matrix_type *Am = matrix_alloc_copy(data->Am); + matrix_type *Apr = matrix_alloc_copy(data->prior); - printf ("The current iteration number is %d \n ", data->iteration_nr); + // fprintf(stdout,"\n"); + // fprintf(stdout,"A: %d x %d\n", matrix_get_rows(A), matrix_get_columns(A)); + // fprintf(stdout,"prior : %d x %d\n", matrix_get_rows(data->prior), matrix_get_columns(data->prior)); + // fprintf(stdout,"state : %d x %d\n", matrix_get_rows(data->state), matrix_get_columns(data->state)); + // fprintf(stdout,"Apr : %d x %d\n", matrix_get_rows(Apr), matrix_get_columns(Apr)); + // fprintf(stdout,"Am : %d x %d\n", matrix_get_rows(Am), matrix_get_columns(Am)); + // Example: + // A : 27760 x 10 + // prior : 27760 x 10 + // state : 27760 x 50 + // prior0 : 27760 x 50 + // Apr : 27760 x 10 + // Am : 27760 x 1 + + + int nsign1 = matrix_get_columns(data->Am); + + + matrix_type * X4 = matrix_alloc(nsign1,ens_size); + matrix_type * X5 = matrix_alloc(state_size,ens_size); + matrix_type * X6 = matrix_alloc(ens_size,ens_size); + matrix_type * X7 = matrix_alloc(ens_size,ens_size); + matrix_type * dA2 = matrix_alloc(state_size , ens_size); + matrix_type * Dk1 = matrix_alloc_copy( A ); + // Dk = Csc^(-1) * (A - Aprior) + // X4 = Am' * Dk + { + matrix_type * Dk = matrix_alloc_copy( A ); + matrix_inplace_sub(Dk, Apr); + rml_enkf_common_scaleA(Dk , data->Csc , true); + matrix_dgemm(X4 , Am , Dk , true, false, 1.0, 0.0); + matrix_free(Dk); + } + // X5 = Am * X4 + matrix_matmul(X5 , Am , X4); + + // Dk1 = Csc^(-1)/sqrt(N-1) * A*(I - 1/N*ones(m,N)) + matrix_subtract_row_mean(Dk1); // Dk1 = Dk1 * (I - 1/N*ones(m,N)) + rml_enkf_common_scaleA(Dk1 , data->Csc , true); // Dk1 = Csc^(-1) * Dk1 + matrix_scale(Dk1,nsc); // Dk1 = Dk1 / sqrt(N-1) + + // X6 = Dk1' * X5 + matrix_dgemm(X6, Dk1, X5, true, false, 1.0, 0.0); + + // X7 + enkf_linalg_rml_enkfX7(X7, VdTr , Wdr , data->lambda + 1, X6); + + // delta m_2 + rml_enkf_common_scaleA(Dk1 , data->Csc , false); + matrix_matmul(dA2 , Dk1 , X7); + matrix_inplace_sub(A, dA2); + + matrix_free(Am); + matrix_free(Apr); + matrix_free(X4); + matrix_free(X5); + matrix_free(X6); + matrix_free(X7); + matrix_free(dA2); + matrix_free(Dk1); +} + +// Initialize state and prior from A. Initialize lambda0, lambda. Call initA__, init1__ +static void rml_enkf_updateA_iter0(rml_enkf_data_type * data, matrix_type * A, matrix_type * S, matrix_type * R, matrix_type * dObs, matrix_type * E, matrix_type * D, matrix_type * Cd) { + + int ens_size = matrix_get_columns( S ); + int nrobs = matrix_get_rows( S ); + int nrmin = util_int_min( ens_size , nrobs); + int state_size = matrix_get_rows( A ); + matrix_type * Skm = matrix_alloc(ens_size, ens_size); // Mismatch + matrix_type * Ud = matrix_alloc( nrobs , nrmin ); /* Left singular vectors. */ + matrix_type * VdT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ + double * Wd = util_calloc( nrmin , sizeof * Wd ); + + data->Csc = util_calloc(state_size , sizeof * data->Csc); + data->Sk = enkf_linalg_data_mismatch(D,Cd,Skm); + data->Std = matrix_diag_std(Skm,data->Sk); + + if (data->lambda0 < 0) + data->lambda = pow(10 , floor(log10(data->Sk/(2*nrobs))) ); + else + data->lambda = data->lambda0; + + // state = A, prior = A + rml_enkf_common_store_state( data->state , A , data->ens_mask ); + rml_enkf_common_recover_state( A , data->prior , data->ens_mask ); + + // Update dependant on data mismatch + rml_enkf_initA__(data , A, S , Cd , E , D , Ud , Wd , VdT); + // Update dependant on prior mismatch. This should be zero (coz iter0). + // Therefore the purpose of init1__ is just to prepare some matrices. + if (data->use_prior) { + rml_enkf_init_Csc( data ); + rml_enkf_init1__(data ); + } + + rml_enkf_write_iter_info(data, data->Sk, data->Std); + + matrix_free( Skm ); + matrix_free( Ud ); + matrix_free( VdT ); + free( Wd ); +} +// Main routine. Controls the iterations. Called from analysis_module.c: analysis_module_updateA() +void rml_enkf_updateA(void * module_data, matrix_type * A, matrix_type * S, matrix_type * R, matrix_type * dObs, matrix_type * E, matrix_type * D) { +// A : ensemble matrix +// R : (Inv?) Obs error cov. +// S : measured ensemble +// dObs: observed data +// E : perturbations for obs +// D = dObs + E - S : Innovations (wrt pert. obs) + + + + double Sk_new; // Mismatch + double Std_new; // Std dev(Mismatch) + rml_enkf_data_type * data = rml_enkf_data_safe_cast( module_data ); + int nrobs = matrix_get_rows( S ); // Num obs + int ens_size = matrix_get_columns( S ); // N + double nsc = 1/sqrt(ens_size-1); // Scale factor + matrix_type * Cd = matrix_alloc( nrobs, nrobs ); // Cov(E), where E = measurement perturbations? + + + // Empirical error covar. R is left unused. Investigate? + enkf_linalg_Covariance(Cd ,E ,nsc, nrobs); // Cd = SampCov(E) (including (N-1) normalization) + matrix_inv(Cd); // In-place inversion + + rml_enkf_open_log_file(data); + fprintf(stdout,"\nIter %d --> %d", data->iteration_nr, data->iteration_nr + 1); + + + if (data->iteration_nr == 0) { + // IF ITERATION 0 + rml_enkf_updateA_iter0(data , A , S , R , dObs , E , D , Cd); + data->iteration_nr++; + } else { + // IF ITERATION 1, 2, ... + int nrmin = util_int_min( ens_size , nrobs); // Min(p,N) + matrix_type * Ud = matrix_alloc( nrobs , nrmin ); // Left singular vectors. */ + matrix_type * VdT = matrix_alloc( nrmin , ens_size ); // Right singular vectors. */ + double * Wd = util_calloc( nrmin , sizeof * Wd ); // Singular values, vector + matrix_type * Skm = matrix_alloc(ens_size,ens_size); // Mismatch + Sk_new = enkf_linalg_data_mismatch(D,Cd,Skm); // Skm = D'*inv(Cd)*D; Sk_new = trace(Skm)/N + Std_new = matrix_diag_std(Skm,Sk_new); // Standard deviation of mismatches. + + + // Lambda = Normalized data mismatch (rounded) + if (data->lambda_recalculate) + data->lambda = pow(10 , floor(log10(Sk_new / (2*nrobs))) ); + + // Accept/Reject update? Lambda calculation. + { + bool mismatch_reduced = false; + bool std_reduced = false; + + if (Sk_new < data->Sk) + mismatch_reduced = true; + + if (Std_new <= data->Std) + std_reduced = true; + + fprintf(stdout,"\nWriting iter info to file now. Iter %d --> %d", data->iteration_nr, data->iteration_nr + 1); + rml_enkf_write_iter_info(data, Sk_new, Std_new); + + if (mismatch_reduced) { + /* + Stop check: if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! + */ + + // Reduce Lambda + if (std_reduced) + data->lambda = data->lambda * data->lambda_reduce_factor; + + rml_enkf_common_store_state(data->state , A , data->ens_mask ); + + data->Sk = Sk_new; + data->Std=Std_new; + data->iteration_nr++; + } else { + // Increase lambda + data->lambda = data->lambda * data->lambda_increase_factor; + // A = data->state + rml_enkf_common_recover_state( data->state , A , data->ens_mask ); + } + } + + // Update dependant on data mismatch (delta m_1) + rml_enkf_initA__(data , A , S , Cd , E , D , Ud , Wd , VdT); + // Update dependant on prior mismatch (delta m_2) + if (data->use_prior) { + rml_enkf_init_Csc( data ); + rml_enkf_init2__(data , A , Wd , VdT); + } + + // Free + matrix_free(Skm); + matrix_free( Ud ); + matrix_free( VdT ); + free( Wd ); + } + + if (data->lambda < data->lambda_min) + data->lambda = data->lambda_min; + + + if (data->log_stream) + fclose( data->log_stream ); + matrix_free(Cd); - matrix_free(Ud); - matrix_free(VdT); - matrix_free(Skm); - free(Wd); - fclose(fp); } +// Called from analysis_module.c: analysis_module_init_update() +void rml_enkf_init_update(void * arg, const bool_vector_type * ens_mask, const matrix_type * S, const matrix_type * R, const matrix_type * dObs, const matrix_type * E, const matrix_type * D ) { + + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + bool_vector_memcpy( module_data->ens_mask , ens_mask ); +} + + + + + + +//********************************************** +// Set / Get basic types +//********************************************** +bool rml_enkf_set_int( void * arg , const char * var_name , int value) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + { + bool name_recognized = true; + + if (strcmp( var_name , ENKF_NCOMP_KEY_) == 0) + rml_enkf_set_subspace_dimension( module_data , value ); + else if (strcmp( var_name , ITER_KEY) == 0) + rml_enkf_set_iteration_nr( module_data , value ); + else + name_recognized = false; + + return name_recognized; + } +} + +int rml_enkf_get_int( const void * arg, const char * var_name) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ITER_KEY) == 0) + return module_data->iteration_nr; + else + return -1; + } +} +bool rml_enkf_set_bool( void * arg , const char * var_name , bool value) { + rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); + { + bool name_recognized = true; + + if (strcmp( var_name , USE_PRIOR_KEY) == 0) + rml_enkf_set_use_prior( module_data , value ); + else if (strcmp( var_name , CLEAR_LOG_KEY) == 0) + rml_enkf_set_clear_log( module_data , value ); + else if (strcmp( var_name , LAMBDA_RECALCULATE_KEY) == 0) + rml_enkf_set_lambda_recalculate( module_data , value ); + else + name_recognized = false; + return name_recognized; + } +} +bool rml_enkf_get_bool( const void * arg, const char * var_name) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , USE_PRIOR_KEY) == 0) + return module_data->use_prior; + else if (strcmp(var_name , CLEAR_LOG_KEY) == 0) + return module_data->clear_log; + else if (strcmp(var_name , LAMBDA_RECALCULATE_KEY) == 0) + return module_data->lambda_recalculate; + else + return false; + } +} bool rml_enkf_set_double( void * arg , const char * var_name , double value) { rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); @@ -299,8 +785,14 @@ bool rml_enkf_set_double( void * arg , const char * var_name , double value) { if (strcmp( var_name , ENKF_TRUNCATION_KEY_) == 0) rml_enkf_set_truncation( module_data , value ); - else if (strcmp( var_name , ENKF_LAMBDA0_KEY_) == 0) + else if (strcmp( var_name , LAMBDA_INCREASE_FACTOR_KEY) == 0) + rml_enkf_set_lambda_increase_factor( module_data , value ); + else if (strcmp( var_name , LAMBDA_REDUCE_FACTOR_KEY) == 0) + rml_enkf_set_lambda_reduce_factor( module_data , value ); + else if (strcmp( var_name , LAMBDA0_KEY) == 0) rml_enkf_set_lambda0( module_data , value ); + else if (strcmp( var_name , LAMBDA_MIN_KEY) == 0) + rml_enkf_set_lambda_min( module_data , value ); else name_recognized = false; @@ -308,16 +800,32 @@ bool rml_enkf_set_double( void * arg , const char * var_name , double value) { } } +double rml_enkf_get_double( const void * arg, const char * var_name) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , LAMBDA_REDUCE_FACTOR_KEY) == 0) + return module_data->lambda_reduce_factor; + if (strcmp(var_name , LAMBDA_INCREASE_FACTOR_KEY) == 0) + return module_data->lambda_increase_factor; + if (strcmp(var_name , LAMBDA0_KEY) == 0) + return module_data->lambda0; + if (strcmp(var_name , LAMBDA_MIN_KEY) == 0) + return module_data->lambda_min; + if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return module_data->truncation; + else + return -1; + } +} + -bool rml_enkf_set_int( void * arg , const char * var_name , int value) { +bool rml_enkf_set_string( void * arg , const char * var_name , const char * value) { rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); { bool name_recognized = true; - if (strcmp( var_name , ENKF_NCOMP_KEY_) == 0) - rml_enkf_set_subspace_dimension( module_data , value ); - else if(strcmp( var_name , ENKF_ITER_KEY_) == 0) - rml_enkf_set_iteration_number( module_data , value ); + if (strcmp( var_name , LOG_FILE_KEY) == 0) + rml_enkf_set_log_file( module_data , value ); else name_recognized = false; @@ -325,7 +833,6 @@ bool rml_enkf_set_int( void * arg , const char * var_name , int value) { } } - long rml_enkf_get_options( void * arg , long flag ) { rml_enkf_data_type * module_data = rml_enkf_data_safe_cast( arg ); { @@ -333,54 +840,51 @@ long rml_enkf_get_options( void * arg , long flag ) { } } +bool rml_enkf_has_var( const void * arg, const char * var_name) { + { + if (strcmp(var_name , ITER_KEY) == 0) + return true; + else if (strcmp(var_name , USE_PRIOR_KEY) == 0) + return true; + else if (strcmp(var_name , LAMBDA_INCREASE_FACTOR_KEY) == 0) + return true; + else if (strcmp(var_name , LAMBDA_REDUCE_FACTOR_KEY) == 0) + return true; + else if (strcmp(var_name , LAMBDA0_KEY) == 0) + return true; + else if (strcmp(var_name , LAMBDA_MIN_KEY) == 0) + return true; + else if (strcmp(var_name , LAMBDA_RECALCULATE_KEY) == 0) + return true; + else if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return true; + else if (strcmp(var_name , LOG_FILE_KEY) == 0) + return true; + else if (strcmp(var_name , CLEAR_LOG_KEY) == 0) + return true; + else + return false; + } +} - - bool rml_enkf_has_var( const void * arg, const char * var_name) { - bool ret = false; - - if ((strcmp(var_name , ENKF_ITER_KEY_) == 0) || - (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) || - (strcmp(var_name , ENKF_LAMBDA0_KEY_) == 0)) { - ret = true; - } - return ret; - } - - - - - int rml_enkf_get_int( const void * arg, const char * var_name) { - const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); - { - if (strcmp(var_name , ENKF_ITER_KEY_) == 0) - return module_data->iteration_nr; - else - return -1; - } - } - - double rml_enkf_get_double( const void * arg, const char * var_name) { - const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); - { - if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) - return module_data->truncation; - else if (strcmp(var_name , ENKF_LAMBDA0_KEY_) == 0) - return module_data->lambda0; - else - return -1.0; - } - } - +void * rml_enkf_get_ptr( const void * arg , const char * var_name ) { + const rml_enkf_data_type * module_data = rml_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , LOG_FILE_KEY) == 0) + return module_data->log_file; + else + return NULL; + } +} -/** - gcc -fpic -c -I?? - gcc -shared -o -*/ +//********************************************** +// Symbol table +//********************************************** #ifdef INTERNAL_LINK #define SYMBOL_TABLE rml_enkf_symbol_table #else @@ -389,20 +893,21 @@ long rml_enkf_get_options( void * arg , long flag ) { analysis_table_type SYMBOL_TABLE = { - .alloc = rml_enkf_data_alloc, - .freef = rml_enkf_data_free, - .set_int = rml_enkf_set_int , - .set_double = rml_enkf_set_double , - .set_bool = NULL , - .set_string = NULL , - .get_options = rml_enkf_get_options , - .initX = NULL, - .updateA = rml_enkf_updateA , - .init_update = NULL, - .complete_update = NULL, - .has_var = rml_enkf_has_var, - .get_int = rml_enkf_get_int, - .get_double = rml_enkf_get_double, - .get_ptr = NULL, + .alloc = rml_enkf_data_alloc, + .freef = rml_enkf_data_free, + .set_int = rml_enkf_set_int , + .set_double = rml_enkf_set_double , + .set_bool = rml_enkf_set_bool, + .set_string = rml_enkf_set_string, + .get_options = rml_enkf_get_options , + .initX = NULL, + .updateA = rml_enkf_updateA , + .init_update = rml_enkf_init_update , + .complete_update = NULL, + .has_var = rml_enkf_has_var, + .get_int = rml_enkf_get_int, + .get_double = rml_enkf_get_double, + .get_bool = rml_enkf_get_bool, + .get_ptr = rml_enkf_get_ptr, }; diff --git a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.c b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.c index 80290bb4f5..5de985b2bd 100644 --- a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.c +++ b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.c @@ -1,5 +1,3 @@ - - /* Copyright (C) 2011 Statoil ASA, Norway. @@ -34,69 +32,60 @@ #include -/* This program contains common functions to both rml_enkf & rml_enkf_imodel*/ - -void rml_enkf_common_initA__( matrix_type * A , - matrix_type * S , - matrix_type * Cd , - matrix_type * E , - matrix_type * D , - double truncation, - double lamda, - matrix_type * Udr, - double * Wdr, - matrix_type * VdTr) { - - int nrobs = matrix_get_rows( S ); - int ens_size = matrix_get_columns( S ); - double a = lamda + 1; - matrix_type *tmp = matrix_alloc (nrobs, ens_size); - double nsc = 1/sqrt(ens_size-1); - - printf("The lamda Value is %5.5f\n",lamda); - printf("The Value of Truncation is %4.2f \n",truncation); +// Explanation +// zzz_enkf_common_store_state( state , A ,ens_mask) assigns A to state. RESIZES state to rows(A)-by-LEN(ens_mask) +// zzz_enkf_common_recover_state(state , A ,ens_mask) assigns state to A. RESIZES A to rows(state)-by-SUM(ens_mask) + + +void rml_enkf_common_store_state( matrix_type * state , const matrix_type * A , const bool_vector_type * ens_mask ) { + matrix_resize( state , matrix_get_rows( A ) , bool_vector_size( ens_mask ) , false); + { + const int ens_size = bool_vector_size( ens_mask ); + int active_index = 0; + for (int iens = 0; iens < ens_size; iens++) { + if (bool_vector_iget( ens_mask , iens )) { + matrix_copy_column( state , A , iens , active_index ); + active_index++; + } else + matrix_set_const_column( state , iens , 0); + } + } +} - matrix_subtract_row_mean( S ); /* Shift away the mean in the ensemble predictions*/ - matrix_inplace_diag_sqrt(Cd); - matrix_dgemm(tmp, Cd, S,false, false, 1.0, 0.0); - matrix_scale(tmp, nsc); - - printf("The Scaling of data matrix completed !\n "); - // SVD(S) = Ud * Wd * Vd(T) - int nsign = enkf_linalg_svd_truncation(tmp , truncation , -1 , DGESVD_MIN_RETURN , Wdr , Udr , VdTr); - - /* After this we only work with the reduced dimension matrices */ +void rml_enkf_common_recover_state( const matrix_type * state , matrix_type * A , const bool_vector_type * ens_mask ) { + const int ens_size = bool_vector_size( ens_mask ); + const int active_size = bool_vector_count_equal( ens_mask , true ); + const int rows = matrix_get_rows( state ); - printf("The number of siginificant ensembles are %d \n ",nsign); - - matrix_type * X1 = matrix_alloc( nsign, ens_size); - matrix_type * X2 = matrix_alloc (nsign, ens_size ); - matrix_type * X3 = matrix_alloc (ens_size, ens_size ); - - - // Compute the matrices X1,X2,X3 and dA - enkf_linalg_rml_enkfX1(X1, Udr ,D ,Cd ); //X1 = Ud(T)*Cd(-1/2)*D -- D= -(dk-d0) - enkf_linalg_rml_enkfX2(X2, Wdr ,X1 ,a, nsign); //X2 = ((a*Ipd)+Wd^2)^-1 * X1 - - matrix_free(X1); - - enkf_linalg_rml_enkfX3(X3, VdTr ,Wdr,X2, nsign); //X3 = Vd *Wd*X2 - printf("The X3 matrix is computed !\n "); - - matrix_type *dA1= matrix_alloc (matrix_get_rows(A), ens_size); - matrix_type * Dm = matrix_alloc_copy( A ); + matrix_resize( A , rows , active_size , false ); + { + int active_index = 0; + for (int iens = 0; iens < ens_size; iens++) { + if (bool_vector_iget( ens_mask , iens )) { + matrix_copy_column( A , state , active_index , iens ); + active_index++; + } + } + } +} - matrix_subtract_row_mean( Dm ); /* Remove the mean from the ensemble of model parameters*/ - matrix_scale(Dm, nsc); - enkf_linalg_rml_enkfdA(dA1, Dm, X3); //dA = Dm * X3 - matrix_inplace_add(A,dA1); //dA - matrix_free(X3); - matrix_free(Dm); - matrix_free(dA1); +// Scale rows by the entries in the vector Csc +void rml_enkf_common_scaleA(matrix_type *A , const double * Csc, bool invert ){ + int nrows = matrix_get_rows(A); + if (invert) { + for (int i=0; i< nrows ; i++) { + double sc= 1/Csc[i]; + matrix_scale_row(A, i, sc); + } + } else { + for (int i=0; i< nrows ; i++) { + double sc= Csc[i]; + matrix_scale_row(A, i, sc); + } + } } - diff --git a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.h b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.h index fcb0d38e0b..d3845f8a54 100644 --- a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.h +++ b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_common.h @@ -1,4 +1,3 @@ - #ifndef __RML_ENKF_COMMON_H__ #define __RML_ENKF_COMMON_H__ @@ -6,18 +5,11 @@ #include #include +#include -void rml_enkf_common_initA__( matrix_type * A , - matrix_type * S , - matrix_type * Cd , - matrix_type * E , - matrix_type * D , - double truncation, - double lamda, - matrix_type * Ud, - double * Wd, - matrix_type * VdT); - +void rml_enkf_common_store_state( matrix_type * state , const matrix_type * A , const bool_vector_type * ens_mask ); +void rml_enkf_common_recover_state( const matrix_type * state , matrix_type * A , const bool_vector_type * ens_mask ); +void rml_enkf_common_scaleA(matrix_type *A , const double * Csc, bool invert ); #endif diff --git a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_imodel.c b/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_imodel.c deleted file mode 100644 index 6db9972906..0000000000 --- a/ThirdParty/Ert/devel/libanalysis/modules/rml_enkf_imodel.c +++ /dev/null @@ -1,532 +0,0 @@ -/* - Copyright (C) 2011 Statoil ASA, Norway. - - The file 'rml_enkf_imodel.c' is part of ERT - Ensemble based Reservoir Tool. - - ERT is free software: you can redistribute it and/or modify - it under the terms of the GNU General Public License as published by - the Free Software Foundation, either version 3 of the License, or - (at your option) any later version. - - ERT is distributed in the hope that it will be useful, but WITHOUT ANY - WARRANTY; without even the implied warranty of MERCHANTABILITY or - FITNESS FOR A PARTICULAR PURPOSE. - - See the GNU General Public License at - for more details. -*/ - - -#include -#include -#include -#include - -#include -#include -#include -#include -#include - - -#include -#include -#include -#include - -#include - -/* - A random 'magic' integer id which is used for run-time type checking - of the input data. -*/ -#define RML_ENKF_IMODEL_TYPE_ID 261123 - -typedef struct rml_enkf_imodel_data_struct rml_enkf_imodel_data_type; - - -/* - Observe that only one of the settings subspace_dimension and - truncation can be valid at a time; otherwise the svd routine will - fail. This implies that the set_truncation() and - set_subspace_dimension() routines will set one variable, AND - INVALIDATE THE OTHER. For most situations this will be OK, but if - you have repeated calls to both of these functions the end result - might be a surprise. -*/ -#define INVALID_SUBSPACE_DIMENSION -1 -#define INVALID_TRUNCATION -1 -#define DEFAULT_SUBSPACE_DIMENSION INVALID_SUBSPACE_DIMENSION - - - - - -/* - The configuration data used by the rml_enkf_imodel module is contained in a - rml_enkf_imodel_data_struct instance. The data type used for the rml_enkf_imodel - module is quite simple; with only a few scalar variables, but there - are essentially no limits to what you can pack into such a datatype. - - All the functions in the module have a void pointer as the first - argument, this will immediately be casted to a rml_enkf_imodel_data_type - instance, to get some type safety the UTIL_TYPE_ID system should be - used (see documentation in util.h) - - The data structure holding the data for your analysis module should - be created and initialized by a constructor, which should be - registered with the '.alloc' element of the analysis table; in the - same manner the desctruction of this data should be handled by a - destructor or free() function registered with the .freef field of - the analysis table. -*/ - - - - -struct rml_enkf_imodel_data_struct { - UTIL_TYPE_ID_DECLARATION; - double truncation; // Controlled by config key: ENKF_TRUNCATION_KEY - int subspace_dimension; // Controlled by config key: ENKF_NCOMP_KEY (-1: use Truncation instead) - long option_flags; - int iteration_nr; // Keep track of the outer iteration loop - double lamda; // parameter to control the search direction in Marquardt levenberg optimization - double Sk; // Objective function value - double Std; // Standard Deviation of the Objective function - double * Csc; - matrix_type * Am; - matrix_type *prior; - matrix_type *state; -}; - - -/* - This is a macro which will expand to generate a function: - - rml_enkf_imodel_data_type * rml_enkf_imodel_data_safe_cast( void * arg ) {} - - which is used for runtime type checking of all the functions which - accept a void pointer as first argument. -*/ -static UTIL_SAFE_CAST_FUNCTION( rml_enkf_imodel_data , RML_ENKF_IMODEL_TYPE_ID ) -static UTIL_SAFE_CAST_FUNCTION_CONST( rml_enkf_imodel_data , RML_ENKF_IMODEL_TYPE_ID ) - - -double rml_enkf_imodel_get_truncation( rml_enkf_imodel_data_type * data ) { - return data->truncation; -} - -int rml_enkf_imodel_get_subspace_dimension( rml_enkf_imodel_data_type * data ) { - return data->subspace_dimension; -} - -void rml_enkf_imodel_set_truncation( rml_enkf_imodel_data_type * data , double truncation ) { - data->truncation = truncation; - if (truncation > 0.0) - data->subspace_dimension = INVALID_SUBSPACE_DIMENSION; -} - -void rml_enkf_imodel_set_subspace_dimension( rml_enkf_imodel_data_type * data , int subspace_dimension) { - data->subspace_dimension = subspace_dimension; - if (subspace_dimension > 0) - data->truncation = INVALID_TRUNCATION; -} - - - -void * rml_enkf_imodel_data_alloc( rng_type * rng) { - rml_enkf_imodel_data_type * data = util_malloc( sizeof * data); - UTIL_TYPE_ID_INIT( data , RML_ENKF_IMODEL_TYPE_ID ); - - rml_enkf_imodel_set_truncation( data , DEFAULT_ENKF_TRUNCATION_ ); - rml_enkf_imodel_set_subspace_dimension( data , DEFAULT_SUBSPACE_DIMENSION ); - data->option_flags = ANALYSIS_NEED_ED + ANALYSIS_UPDATE_A + ANALYSIS_ITERABLE + ANALYSIS_SCALE_DATA; - data->iteration_nr = 0; - data->Std = 0; - return data; -} - - -void rml_enkf_imodel_data_free( void * data ) { - free( data ); -} - - -void rml_enkf_imodel_init1__( matrix_type * A, - rml_enkf_imodel_data_type * data, - double truncation, - double nsc) { - - - int nstate = matrix_get_rows( A ); - int ens_size = matrix_get_columns( A ); - int nrmin = util_int_min( ens_size , nstate); - matrix_type * Dm = matrix_alloc_copy( A ); - - matrix_type * Um = matrix_alloc( nstate , nrmin ); /* Left singular vectors. */ - matrix_type * VmT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ - double * Wm = util_calloc( nrmin , sizeof * Wm ); - - - matrix_subtract_row_mean(Dm); - - - //This routine only computes the SVD of Ensemble State matrix - - - for (int i=0; iCsc[i]); - matrix_scale_row (Dm,i, sc); - } - - - int nsign1 = enkf_linalg_svd_truncation(Dm , truncation , -1 , DGESVD_MIN_RETURN , Wm , Um , VmT); - printf("The significant Eigen values are %d\n",nsign1); - - enkf_linalg_rml_enkfAm(Um, Wm, nsign1); - data->Am=matrix_alloc_copy(Um); - printf("\n Init1 completed\n"); - matrix_free(Um); - matrix_free(VmT); - matrix_free(Dm); - free(Wm); - -} - -void rml_enkf_imodel_Create_Csc(rml_enkf_imodel_data_type * data){ - // Create the scaling matrix based on the state vector - - int nstate = matrix_get_rows( data->prior ); - int ens_size = matrix_get_columns( data->prior ); - - - for (int i=0; i < nstate; i++) { - double sumrow = matrix_get_row_sum(data->prior , i); - double tmp = sumrow / ens_size; - if (abs(tmp)< 1) - data->Csc[i]=0.05; - else - data->Csc[i]= 1; - } - -} - -void rml_enkf_imodel_scalingA(matrix_type *A, double * Csc, bool invert ){ - int nrows = matrix_get_rows(A); - if (invert) - for (int i=0; i< nrows ; i++) - { - double sc= 1/Csc[i]; - matrix_scale_row(A, i, sc); - } - else - for (int i=0; i< nrows ; i++) - { - double sc= Csc[i]; - matrix_scale_row(A, i, sc); - } -} - - - -void rml_enkf_imodel_init2__( rml_enkf_imodel_data_type * data, - matrix_type *A, - matrix_type *Acopy, - double * Wdr, - double nsc, - matrix_type * VdTr) { - - - int nstate = matrix_get_rows( Acopy ); - int ens_size = matrix_get_columns( Acopy ); - matrix_type * Dk = matrix_alloc_copy( Acopy ); - - double a = data->lamda + 1; - matrix_type *Am= matrix_alloc_copy(data->Am); - matrix_type *Apr= matrix_alloc_copy(data->prior); - double *Csc = util_calloc(nstate , sizeof * Csc ); - for (int i=0; i< nstate ; i++) - { - Csc[i]= data->Csc[i]; - } - int nsign1= matrix_get_columns(data->Am); - - - matrix_type * X4 = matrix_alloc(nsign1,ens_size); - matrix_type * X5 = matrix_alloc(nstate,ens_size); - matrix_type * X6 = matrix_alloc(ens_size,ens_size); - matrix_type * X7 = matrix_alloc(ens_size,ens_size); - matrix_type * dA2 = matrix_alloc(nstate, ens_size); - - - //Compute dA2 - printf("\n Starting init 2 \n"); - matrix_inplace_sub(Dk, Apr); - rml_enkf_imodel_scalingA(Dk,Csc,true); - - enkf_linalg_rml_enkfX4(X4, Am, Dk); - matrix_free(Dk); - - enkf_linalg_rml_enkfX5(X5, Am, X4); - printf("\nMatrix X5 computed\n"); - - matrix_type * Dk1 = matrix_alloc_copy( Acopy ); - matrix_subtract_row_mean(Dk1); - rml_enkf_imodel_scalingA(Dk1,Csc,true); - matrix_scale(Dk1,nsc); - - enkf_linalg_rml_enkfX6(X6, Dk1,X5); - printf("Matrix X6 computed!\n"); - - enkf_linalg_rml_enkfX7(X7, VdTr ,Wdr, a, X6); - printf("Matrix X7 computed!\n"); - - rml_enkf_imodel_scalingA(Dk1,Csc,false); - printf("Matrix Dk1 Scaling done!\n"); - - enkf_linalg_rml_enkfXdA2(dA2,Dk1,X7); - printf("Matrix dA2 computed!\n"); - - matrix_inplace_sub(A, dA2); - - free(Csc); - matrix_free(Am); - matrix_free(Apr); - matrix_free(X4); - matrix_free(X5); - matrix_free(X6); - matrix_free(X7); - matrix_free(dA2); - matrix_free(Dk1); - - -} - - - -void rml_enkf_imodel_updateA(void * module_data , - matrix_type * A , - matrix_type * S , - matrix_type * R , - matrix_type * dObs , - matrix_type * E , - matrix_type * D) { - - - rml_enkf_imodel_data_type * data = rml_enkf_imodel_data_safe_cast( module_data ); - double truncation = data->truncation; - - double Sk_new; - double Std_new; - matrix_type * Skm = matrix_alloc(matrix_get_columns(D),matrix_get_columns(D)); - FILE *fp = util_fopen("rml_enkf_imodel_output","a"); - - int nstate = matrix_get_rows(A); - int ens_size = matrix_get_columns( S ); - int nrobs = matrix_get_rows( S ); - matrix_type * Cd = matrix_alloc( nrobs, nrobs ); - - double nsc = 1/sqrt(ens_size-1); - - - int nrmin = util_int_min( ens_size , nrobs); - matrix_type * Ud = matrix_alloc( nrobs , nrmin ); /* Left singular vectors. */ - matrix_type * VdT = matrix_alloc( nrmin , ens_size ); /* Right singular vectors. */ - double * Wd = util_calloc( nrmin , sizeof * Wd ); - - enkf_linalg_Covariance(Cd ,E ,nsc, nrobs); - matrix_inv(Cd); - - - if (data->iteration_nr == 0) { - Sk_new = enkf_linalg_data_mismatch(D,Cd,Skm); //Calculate the intitial data mismatch term - Std_new= matrix_diag_std(Skm,Sk_new); - - data->lamda =pow(10,floor(log10(Sk_new/(2*nrobs)))); - data->prior = matrix_alloc_copy(A); - data->state = matrix_alloc_copy(A); - - data->Csc = util_calloc(nstate , sizeof * data->Csc); - rml_enkf_imodel_Create_Csc(data); - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lamda,Ud,Wd,VdT); - printf("\n model scaling matrix computed\n"); - rml_enkf_imodel_init1__(data->prior, data, truncation, nsc); - - data->Sk = Sk_new; - data->Std= Std_new; - - printf("Prior Objective function value is %5.3f \n", data->Sk); - - fprintf(fp,"Iteration number\t Lamda Value \t Current Mean (OB FN) \t Old Mean\t Current Stddev\n"); - fprintf(fp, "\n\n"); - fprintf(fp,"%d \t\t NA \t %5.5f \t \t %5.5f \n",data->iteration_nr, Sk_new, Std_new); - - } - - else - { - matrix_type *Acopy = matrix_alloc_copy (A); - Sk_new = enkf_linalg_data_mismatch(D,Cd,Skm); //Calculate the intitial data mismatch term - Std_new= matrix_diag_std(Skm,Sk_new); - printf(" Current Objective function value is %5.3f \n\n",Sk_new); - printf("The old Objective function value is %5.3f \n", data->Sk); - - - if ((Sk_new< (data->Sk)) && (Std_new<= (data->Std))) - { - if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! - data-> iteration_nr = 16; - - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lamda, Sk_new,data->Sk, Std_new); - data->lamda = data->lamda / 10 ; - data->Std = Std_new; - data->state = matrix_alloc_copy(A); - data->Sk = Sk_new; - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lamda,Ud,Wd,VdT); - rml_enkf_imodel_init2__(data,A,Acopy,Wd,nsc,VdT); - } - else if((Sk_new< (data->Sk)) && (Std_new > (data->Std))) - { - if ( (1- (Sk_new/data->Sk)) < .0001) // check convergence ** model change norm has to be added in this!! - data-> iteration_nr = 16; - - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lamda, Sk_new,data->Sk, Std_new); - data->lamda = data->lamda; - data->Std=Std_new; - data->state = matrix_alloc_copy(A); - data->Sk = Sk_new; - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lamda,Ud,Wd,VdT); - rml_enkf_imodel_init2__(data,A,Acopy,Wd,nsc,VdT); - - } - else { - fprintf(fp,"%d \t\t %5.5f \t %5.5f \t %5.5f \t %5.5f \n",data->iteration_nr,data->lamda, Sk_new,data->Sk, Std_new); - printf("The previous step is rejected !!\n"); - data->lamda = data ->lamda * 4; - matrix_assign( A , data->state ); - printf("matrix copied \n"); - rml_enkf_common_initA__(A,S,Cd,E,D,truncation,data->lamda,Ud,Wd,VdT); - rml_enkf_imodel_init2__(data,A,Acopy,Wd,nsc,VdT); - data->iteration_nr--; - } - matrix_free(Acopy); - } - data->iteration_nr++; - - //setting the lower bound for lamda - if (data->lamda <.01) - data->lamda= .01; - - - printf ("The current iteration number is %d \n ", data->iteration_nr); - - // free(data->Csc); - matrix_free(Ud); - matrix_free(VdT); - free(Wd); - matrix_free(Skm); - matrix_free(Cd); - fclose(fp); - -} - - - - - -bool rml_enkf_imodel_set_double( void * arg , const char * var_name , double value) { - rml_enkf_imodel_data_type * module_data = rml_enkf_imodel_data_safe_cast( arg ); - { - bool name_recognized = true; - - if (strcmp( var_name , ENKF_TRUNCATION_KEY_) == 0) - rml_enkf_imodel_set_truncation( module_data , value ); - else - name_recognized = false; - - return name_recognized; - } -} - - -bool rml_enkf_imodel_set_int( void * arg , const char * var_name , int value) { - rml_enkf_imodel_data_type * module_data = rml_enkf_imodel_data_safe_cast( arg ); - { - bool name_recognized = true; - - if (strcmp( var_name , ENKF_NCOMP_KEY_) == 0) - rml_enkf_imodel_set_subspace_dimension( module_data , value ); - else - name_recognized = false; - - return name_recognized; - } -} - - -long rml_enkf_imodel_get_options( void * arg , long flag ) { - rml_enkf_imodel_data_type * module_data = rml_enkf_imodel_data_safe_cast( arg ); - { - return module_data->option_flags; - } -} - - - - bool rml_enkf_imodel_has_var( const void * arg, const char * var_name) { - { - if (strcmp(var_name , ENKF_ITER_KEY_) == 0) - return true; - else - return false; - } - } - - - - - int rml_enkf_imodel_get_int( const void * arg, const char * var_name) { - const rml_enkf_imodel_data_type * module_data = rml_enkf_imodel_data_safe_cast_const( arg ); - { - if (strcmp(var_name , ENKF_ITER_KEY_) == 0) - return module_data->iteration_nr; - else - return -1; - } - } - - - - -/** - gcc -fpic -c -I?? - gcc -shared -o -*/ - - - -#ifdef INTERNAL_LINK -#define SYMBOL_TABLE rml_enkf_imodel_symbol_table -#else -#define SYMBOL_TABLE EXTERNAL_MODULE_SYMBOL -#endif - - -analysis_table_type SYMBOL_TABLE = { - .alloc = rml_enkf_imodel_data_alloc, - .freef = rml_enkf_imodel_data_free, - .set_int = rml_enkf_imodel_set_int , - .set_double = rml_enkf_imodel_set_double , - .set_bool = NULL , - .set_string = NULL , - .get_options = rml_enkf_imodel_get_options , - .initX = NULL, - .updateA = rml_enkf_imodel_updateA , - .init_update = NULL, - .complete_update = NULL, - .has_var = rml_enkf_imodel_has_var, - .get_int = rml_enkf_imodel_get_int, - .get_double = NULL, - .get_ptr = NULL, -}; - diff --git a/ThirdParty/Ert/devel/libanalysis/modules/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/modules/tests/CMakeLists.txt new file mode 100644 index 0000000000..6463497ffa --- /dev/null +++ b/ThirdParty/Ert/devel/libanalysis/modules/tests/CMakeLists.txt @@ -0,0 +1,5 @@ +add_executable(analysis_rml_enkf_common analysis_rml_enkf_common.c ../rml_enkf_common.c) +target_link_libraries( analysis_rml_enkf_common analysis util test_util ) + +add_test( analysis_rml_enkf_common ${EXECUTABLE_OUTPUT_PATH}/analysis_rml_enkf_common ) + diff --git a/ThirdParty/Ert/devel/libanalysis/modules/tests/analysis_rml_enkf_common.c b/ThirdParty/Ert/devel/libanalysis/modules/tests/analysis_rml_enkf_common.c new file mode 100644 index 0000000000..355eeaca1f --- /dev/null +++ b/ThirdParty/Ert/devel/libanalysis/modules/tests/analysis_rml_enkf_common.c @@ -0,0 +1,133 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'analysis_rml_common.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include +#include + +#include + + + +void test_store_recover_state() { + rng_type * rng = rng_alloc( MZRAN , INIT_DEFAULT ); + int ens_size = 10; + int active_size = 8; + int rows = 100; + matrix_type * state = matrix_alloc(1,1); + bool_vector_type * ens_mask = bool_vector_alloc(ens_size , false); + matrix_type * A = matrix_alloc( rows , active_size); + matrix_type * A2 = matrix_alloc( rows, active_size ); + matrix_type * A3 = matrix_alloc( 1,1 ); + + for (int i=0; i < active_size; i++) + bool_vector_iset( ens_mask , i + 1 , true ); + + matrix_random_init(A , rng); + rml_enkf_common_store_state( state , A , ens_mask ); + + test_assert_int_equal( matrix_get_rows( state ) , rows ); + test_assert_int_equal( matrix_get_columns( state ) , ens_size ); + + { + int g; + int a = 0; + for (g=0; g < ens_size; g++) { + if (bool_vector_iget( ens_mask , g )) { + test_assert_true( matrix_columns_equal( state , g , A , a )); + a++; + } + } + } + + rml_enkf_common_recover_state( state , A2 , ens_mask); + rml_enkf_common_recover_state( state , A3 , ens_mask); + test_assert_true( matrix_equal( A , A2 )); + test_assert_true( matrix_equal( A , A3 )); + + bool_vector_free( ens_mask ); + matrix_free( state ); + matrix_free( A ); +} + + + + + +void test_scaleA() { + const int N = 10; + matrix_type * m1 = matrix_alloc(N , N); + matrix_type * m2 = matrix_alloc(N , N); + double * csc = util_calloc( N , sizeof * csc ); + rng_type * rng = rng_alloc( MZRAN , INIT_DEFAULT ); + + matrix_random_init( m1 , rng ); + matrix_assign(m2 , m1); + test_assert_true( matrix_equal(m1 , m2)); + + { + for (int i=0; i < N; i++) + csc[i] = (i + 2); + } + rml_enkf_common_scaleA( m1 , csc , false ); + { + int row,col; + for (row = 0; row < N; row++) { + for (col=0; col < N; col++) { + double v1 = matrix_iget(m1 , row , col); + double v2 = matrix_iget(m2 , row , col); + + test_assert_double_equal( v1 , v2 * csc[row] ); + } + } + } + rml_enkf_common_scaleA( m2 , csc , false ); + test_assert_true( matrix_equal(m1 , m2)); + + rml_enkf_common_scaleA( m2 , csc , true ); + { + int row,col; + for (row = 0; row < N; row++) { + for (col=0; col < N; col++) { + double v1 = matrix_iget(m1 , row , col); + double v2 = matrix_iget(m2 , row , col); + + test_assert_double_equal( v1 , v2 * csc[row] ); + } + } + } + rml_enkf_common_scaleA( m1 , csc , true ); + test_assert_true( matrix_equal(m1 , m2)); + + + rng_free( rng ); + matrix_free(m1); + matrix_free(m2); + free( csc ); +} + + + +int main(int argc , char ** argv) { + test_store_recover_state(); + test_scaleA(); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libanalysis/script/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/script/CMakeLists.txt index ca6ea7ea7f..ce8e9028fb 100644 --- a/ThirdParty/Ert/devel/libanalysis/script/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/script/CMakeLists.txt @@ -1 +1,8 @@ -install(PROGRAMS ert_module DESTINATION ${CMAKE_INSTALL_PREFIX}/bin) +set (destination ${CMAKE_INSTALL_PREFIX}/bin) + +install(PROGRAMS ert_module DESTINATION ${destination}) + +if (INSTALL_GROUP) + install(CODE "EXECUTE_PROCESS(COMMAND chgrp ${INSTALL_GROUP} ${destination}/ert_module)") + install(CODE "EXECUTE_PROCESS(COMMAND chmod g+w ${destination}/ert_module)") +endif() diff --git a/ThirdParty/Ert/devel/libanalysis/script/ert_module b/ThirdParty/Ert/devel/libanalysis/script/ert_module index 931fb97590..57a4d34683 100644 --- a/ThirdParty/Ert/devel/libanalysis/script/ert_module +++ b/ThirdParty/Ert/devel/libanalysis/script/ert_module @@ -9,7 +9,7 @@ ert_root = os.path.realpath( os.path.join(os.path.dirname( os.path.realpath( os. #----------------------------------------------------------------- default_lib_list = ["analysis" , "ert_util"] -default_define_list = ["HAVE_PTHREAD"] +default_define_list = ["HAVE_PTHREAD" , "COMPILER_GCC"] CFLAGS = "-std=gnu99 -O2 -Wall -fpic -g" @@ -169,10 +169,10 @@ Link: %s %s %s parser = OptionParser( usage ) parser.add_option("--ert-root" , dest="ert_root" , action="store") -parser.add_option("-I" , dest = "include_path_list", action = "append") -parser.add_option("-D" , dest = "define_list" , action = "append") -parser.add_option("-L" , dest = "lib_path_list" , action = "append") -parser.add_option("-l" , dest = "lib_list" , action = "append") +parser.add_option("-I" , dest = "include_path_list", action = "append" , default = []) +parser.add_option("-D" , dest = "define_list" , action = "append" , default = []) +parser.add_option("-L" , dest = "lib_path_list" , action = "append" , default = []) +parser.add_option("-l" , dest = "lib_list" , action = "append" , default = []) parser.add_option("--exclude-ert" , dest = "exclude_ert" , action="store_true" , default = False) parser.add_option("--use-rpath" , dest="use_rpath" , action="store_true" , default = False) parser.add_option("--silent" , dest="silent" , action="store_true" , default = False) @@ -185,28 +185,21 @@ if options.ert_root: ert_root = options.ert_root if options.exclude_ert: - include_path_list = ["./"] - lib_path_list = [] - define_list = [] - lib_list = [] + default_include_path_list = ["./"] + default_lib_path_list = [] + default_lib_list = [] else: - include_path_list = ["./" , "%s/include" % ert_root] - lib_path_list = ["%s/lib64" % ert_root] - define_list = default_define_list - lib_list = default_lib_list + default_include_path_list = ["./" , "%s/include" % ert_root] + default_lib_path_list = ["%s/lib64" % ert_root] + default_lib_list = default_lib_list -if options.include_path_list: - include_path_list += options.include_path_list - -if options.define_list: - define_list += options.define_list - -if options.lib_list: - lib_list += options.lib_list - -if options.lib_path_list: - lib_path_list += options.lib_path_list +# What is supplied as commandline options should take presedence, this +# implies that it should be first OR last on the commandline. +include_path_list = options.include_path_list + default_include_path_list +define_list = default_define_list + options.define_list +lib_list = options.lib_list + default_lib_list +lib_path_list = options.lib_path_list + default_lib_path_list verbose = not options.silent diff --git a/ThirdParty/Ert/devel/libanalysis/src/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/src/CMakeLists.txt index 868b339fc8..c4826a0a2b 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/src/CMakeLists.txt @@ -1,6 +1,6 @@ # Common libanalysis library set( source_files analysis_module.c enkf_linalg.c std_enkf.c sqrt_enkf.c cv_enkf.c bootstrap_enkf.c null_enkf.c fwd_step_enkf.c ) -set( header_files analysis_module.h enkf_linalg.h analysis_table.h std_enkf.h) +set( header_files analysis_module.h enkf_linalg.h analysis_table.h std_enkf.h fwd_step_enkf.h) add_library( analysis SHARED ${source_files} ) set_target_properties( analysis PROPERTIES COMPILE_DEFINITIONS INTERNAL_LINK) set_target_properties( analysis PROPERTIES VERSION 1.0 SOVERSION 1.0 ) diff --git a/ThirdParty/Ert/devel/libanalysis/src/analysis_module.c b/ThirdParty/Ert/devel/libanalysis/src/analysis_module.c index d030a59653..4c2ee86281 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/analysis_module.c +++ b/ThirdParty/Ert/devel/libanalysis/src/analysis_module.c @@ -55,6 +55,7 @@ struct analysis_module_struct { analysis_has_var_ftype * has_var; analysis_get_int_ftype * get_int; analysis_get_double_ftype * get_double; + analysis_get_bool_ftype * get_bool; analysis_get_ptr_ftype * get_ptr; bool internal; @@ -81,6 +82,7 @@ static analysis_module_type * analysis_module_alloc_empty( const char * user_nam module->has_var = NULL; module->get_int = NULL; module->get_double = NULL; + module->get_bool = NULL; module->get_ptr = NULL; module->alloc = NULL; @@ -121,6 +123,7 @@ static analysis_module_type * analysis_module_alloc__( rng_type * rng , module->has_var = table->has_var; module->get_int = table->get_int; module->get_double = table->get_double; + module->get_bool = table->get_bool; module->get_ptr = table->get_ptr; if (module->alloc) @@ -270,13 +273,14 @@ void analysis_module_updateA(analysis_module_type * module , void analysis_module_init_update( analysis_module_type * module , - matrix_type * S , - matrix_type * R , - matrix_type * dObs , - matrix_type * E , - matrix_type * D ) { + const bool_vector_type * ens_mask , + const matrix_type * S , + const matrix_type * R , + const matrix_type * dObs , + const matrix_type * E , + const matrix_type * D ) { if (module->init_update != NULL) - module->init_update( module->module_data , S , R , dObs , E , D); + module->init_update( module->module_data , ens_mask , S , R , dObs , E , D); } @@ -407,6 +411,19 @@ int analysis_module_get_int( const analysis_module_type * module , const char * } +bool analysis_module_get_bool( const analysis_module_type * module , const char * var) { + if (analysis_module_has_var( module , var )) { + if (module->get_bool != NULL) + return module->get_bool( module->module_data , var ); + else + util_exit("%s: Tried to get bool variable:%s from module:%s - get_int() method not implemented for this module\n" , __func__ , var , module->user_name); + } else + util_exit("%s: Tried to get bool variable:%s from module:%s - module does not support this variable \n" , __func__ , var , module->user_name); + + return false; +} + + double analysis_module_get_double( const analysis_module_type * module , const char * var) { if (analysis_module_has_var( module , var )) { if (module->get_double != NULL) diff --git a/ThirdParty/Ert/devel/libanalysis/src/bootstrap_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/bootstrap_enkf.c index 882986b338..3f910b9e0e 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/bootstrap_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/bootstrap_enkf.c @@ -56,281 +56,7 @@ typedef struct { static UTIL_SAFE_CAST_FUNCTION( bootstrap_enkf_data , BOOTSTRAP_ENKF_TYPE_ID ) - -/*****************************************************************/ - - - - -//CV: static void lowrankCinv_pre_cv(const matrix_type * S , -//CV: const matrix_type * R , -//CV: matrix_type * V0T , -//CV: matrix_type * Z , -//CV: double * eig , -//CV: matrix_type * U0, -//CV: double truncation , -//CV: int ncomp) { -//CV: -//CV: const int nrobs = matrix_get_rows( S ); -//CV: const int nrens = matrix_get_columns( S ); -//CV: const int nrmin = util_int_min( nrobs , nrens ); -//CV: -//CV: double * inv_sig0 = util_malloc( nrmin * sizeof * inv_sig0 , __func__); -//CV: -//CV: enkf_linalg_svdS( S , truncation , ncomp , DGESVD_MIN_RETURN , inv_sig0 , U0 , V0T); -//CV: -//CV: { -//CV: matrix_type * B = matrix_alloc( nrmin , nrmin ); -//CV: enkf_linalg_Cee( B , nrens , R , U0 , inv_sig0); /* B = Xo = (N-1) * Sigma0^(+) * U0'* Cee * U0 * Sigma0^(+') (14.26)*/ -//CV: /*USE SVD INSTEAD*/ -//CV: matrix_dgesvd(DGESVD_MIN_RETURN , DGESVD_NONE, B , eig, Z , NULL); -//CV: matrix_free( B ); -//CV: } -//CV: -//CV: { -//CV: int i,j; -//CV: /* Lambda1 = (I + Lambda)^(-1) */ -//CV: -//CV: for (i=0; i < nrmin; i++) -//CV: eig[i] = 1.0 / (1 + eig[i]); -//CV: -//CV: for (j=0; j < nrmin; j++) -//CV: for (i=0; i < nrmin; i++) -//CV: matrix_imul(Z , i , j , inv_sig0[i]); /* Z2 = Sigma0^(+) * Z; */ -//CV: } -//CV: } -//CV: -//CV: -//CV: -//CV: void enkf_analysis_invertS_pre_cv(double truncation, -//CV: int ncomp , -//CV: const matrix_type * S , -//CV: const matrix_type * R , -//CV: matrix_type * V0T , -//CV: matrix_type * Z , -//CV: double * eig , -//CV: matrix_type * U0 ) { -//CV: -//CV: lowrankCinv_pre_cv( S , R , V0T , Z , eig , U0 , truncation , ncomp ); -//CV: } -//CV: -//CV: -//CV: -//CV: static void getW_pre_cv(matrix_type * W , -//CV: const matrix_type * V0T, -//CV: const matrix_type * Z , -//CV: double * eig , -//CV: const matrix_type * U0 , -//CV: int nfolds_CV, -//CV: const matrix_type * A, -//CV: int unique_bootstrap_components , -//CV: rng_type * rng, -//CV: bool pen_press) { -//CV: -//CV: const int nrobs = matrix_get_rows( U0 ); -//CV: const int nrens = matrix_get_columns( V0T ); -//CV: const int nrmin = util_int_min( nrobs , nrens ); -//CV: -//CV: int i,j; -//CV: -//CV: -//CV: /* Vector with random permutations of the itegers 1,...,nrens */ -//CV: int * randperms = util_malloc( sizeof * randperms * nrens, __func__); -//CV: int * indexTest = util_malloc( sizeof * indexTest * nrens, __func__); -//CV: int * indexTrain = util_malloc( sizeof * indexTrain * nrens, __func__); -//CV: -//CV: if(nrens != unique_bootstrap_components) -//CV: nfolds_CV = util_int_min( nfolds_CV , unique_bootstrap_components-1); -//CV: -//CV: -//CV: matrix_type * cvError = matrix_alloc( nrmin,nfolds_CV ); -//CV: -//CV: /*Copy Z */ -//CV: matrix_type * workZ = matrix_alloc_copy( Z ); -//CV: -//CV: int optP; -//CV: -//CV: -//CV: /* start cross-validation: */ -//CV: -//CV: const int maxp = matrix_get_rows(V0T); -//CV: -//CV: /* draw random permutations of the integers 0,...,nrens-1 */ -//CV: for (i=0; i < nrens; i++) -//CV: randperms[i] = i; -//CV: rng_shuffle_int( rng , randperms , nrens ); -//CV: -//CV: -//CV: -//CV: /*need to init cvError to all zeros (?) */ -//CV: for (i = 0; i < nrmin; i++){ -//CV: for( j = 0; j> nfolds_CV; j++){ -//CV: matrix_iset( cvError , i , j , 0.0 ); -//CV: } -//CV: } -//CV: -//CV: int ntest, ntrain, k; -//CV: printf("\nStarting cross-validation\n"); -//CV: for (i = 0; i < nfolds_CV; i++) { -//CV: printf("."); -//CV: -//CV: ntest = 0; -//CV: ntrain = 0; -//CV: k = i; -//CV: /*extract members for the training and test ensembles */ -//CV: for (j = 0; j < nrens; j++) { -//CV: if (j == k) { -//CV: indexTest[ntest] = randperms[j]; -//CV: k += nfolds_CV; -//CV: ntest++; -//CV: } else { -//CV: indexTrain[ntrain] = randperms[j]; -//CV: ntrain++; -//CV: } -//CV: } -//CV: -//CV: //This one instaed: ?? enkf_analysis_get_cv_error_prin_comp( cv_data , cvError , A , indexTest , indexTrain, ntest, ntrain , i , maxP); -//CV: enkf_analysis_get_cv_error( cvError , A , V0T , workZ , eig , indexTest , indexTrain, ntest, ntrain , i ); -//CV: } -//CV: printf("\n"); -//CV: /* find optimal truncation value for the cv-scheme */ -//CV: optP = enkf_analysis_get_optimal_numb_comp( cvError , maxp, nfolds_CV, pen_press); -//CV: -//CV: printf("Optimal number of components found: %d \n",optP); -//CV: printf("\n"); -//CV: FILE * compSel_log = util_fopen("compSel_log_local_cv" , "a"); -//CV: fprintf( compSel_log , " %d ",optP); -//CV: fclose( compSel_log); -//CV: -//CV: -//CV: /*free cvError vector and randperm */ -//CV: matrix_free( cvError ); -//CV: free( randperms ); -//CV: free( indexTest ); -//CV: free( indexTrain ); -//CV: -//CV: /* need to update matrices so that we only use components 1,...,optP */ -//CV: /* remove non-zero entries of the z matrix (we do not want to recompute sigma0^(+') * z */ -//CV: /* this can surely be done much more efficiently, but for now we want to minimize the -//CV: number of potential bugs in the code for now */ -//CV: for (i = optP; i < nrmin; i++) { -//CV: for (j = 0; j < nrmin; j++) { -//CV: matrix_iset(workZ , i , j, 0.0); -//CV: } -//CV: } -//CV: -//CV: -//CV: /*fix the eig vector as well: */ -//CV: { -//CV: int i; -//CV: /* lambda1 = (i + lambda)^(-1) */ -//CV: for (i=optP; i < nrmin; i++) -//CV: eig[i] = 1.0; -//CV: } -//CV: -//CV: matrix_matmul(W , U0 , workZ); /* x1 = w = u0 * z2 = u0 * sigma0^(+') * z */ -//CV: -//CV: -//CV: -//CV: -//CV: /*end cross-validation */ -//CV: } - - -// CV: void enkf_analysis_initX_pre_cv(matrix_type * X , -// CV: int nfolds_CV, -// CV: enkf_mode_type enkf_mode, -// CV: bool bootstrap , -// CV: matrix_type * S , -// CV: matrix_type * R , -// CV: matrix_type * E , -// CV: matrix_type * D , -// CV: rng_type * rng , -// CV: meas_data_type * meas_data , -// CV: obs_data_type * obs_data , -// CV: const matrix_type * randrot , -// CV: const matrix_type * A , -// CV: const matrix_type * V0T , -// CV: const matrix_type * Z , -// CV: const double * eig , -// CV: const matrix_type * U0 , -// CV: meas_data_type * fasit , -// CV: int unique_bootstrap_components) { -// CV: -// CV: int ens_size = meas_data_get_ens_size( meas_data ); -// CV: { -// CV: int nrobs = obs_data_get_active_size(obs_data); -// CV: int nrmin = util_int_min( ens_size , nrobs); -// CV: -// CV: -// CV: /* -// CV: 1: Allocating all matrices -// CV: */ -// CV: /*Need a copy of A, because we need it later */ -// CV: matrix_type * workA = matrix_alloc_copy( A ); /* <- This is a massive memory requirement. */ -// CV: matrix_type * innov = enkf_linalg_alloc_innov( dObs , S ); -// CV: -// CV: matrix_type * W = matrix_alloc(nrobs , nrmin); -// CV: double * workeig = util_malloc( sizeof * workeig * nrmin , __func__); -// CV: -// CV: -// CV: // Really unclear whether the row mean should have been shifted from S???? -// CV: -// CV: /*copy entries in eig:*/ -// CV: { -// CV: int i; -// CV: for (i = 0 ; i < nrmin ; i++) -// CV: workeig[i] = eig[i]; -// CV: } -// CV: -// CV: /* Subtracting the ensemble mean of the state vector ensemble */ -// CV: matrix_subtract_row_mean( workA ); -// CV: -// CV: /* -// CV: 2: Diagonalize the S matrix; singular vectors are stored in W -// CV: and singular values (after some massage) are stored in eig. -// CV: W = X1, eig = inv(I+Lambda1),(Eq.14.30, and 14.29, Evensen, 2007, respectively) -// CV: */ -// CV: -// CV: getW_pre_cv(W , V0T , Z , workeig , U0 , nfolds_CV , workA , unique_bootstrap_components , rng); -// CV: -// CV: /* -// CV: 3: actually calculating the X matrix. -// CV: */ -// CV: switch (enkf_mode) { -// CV: case(ENKF_STANDARD): -// CV: enkf_linalg_init_stdX( X , S , D , W , workeig , bootstrap); -// CV: break; -// CV: case(ENKF_SQRT): -// CV: enkf_linalg_init_sqrtX(X , S , randrot , dObs , W , workeig , bootstrap ); -// CV: break; -// CV: default: -// CV: util_abort("%s: INTERNAL ERROR \n",__func__); -// CV: } -// CV: -// CV: matrix_free( W ); -// CV: matrix_free( R ); -// CV: matrix_free( S ); -// CV: matrix_free( workA ); -// CV: matrix_free( innov ); -// CV: free( workeig ); -// CV: -// CV: if (enkf_mode == ENKF_STANDARD) { -// CV: matrix_free( E ); -// CV: matrix_free( D ); -// CV: } -// CV: -// CV: enkf_analysis_checkX(X , bootstrap); -// CV: } -// CV: } - - - - - - -/*****************************************************************/ - +static UTIL_SAFE_CAST_FUNCTION_CONST( bootstrap_enkf_data , BOOTSTRAP_ENKF_TYPE_ID ) void bootstrap_enkf_set_doCV( bootstrap_enkf_data_type * data , bool doCV) { @@ -376,6 +102,7 @@ void bootstrap_enkf_data_free( void * arg ) { std_enkf_data_free( boot_data->std_enkf_data ); cv_enkf_data_free( boot_data->cv_enkf_data ); } + free( boot_data ); } @@ -443,7 +170,8 @@ void bootstrap_enkf_updateA(void * module_data , } if (bootstrap_data->doCV) { - cv_enkf_init_update( bootstrap_data->cv_enkf_data , S_resampled , R , dObs , E , D); + const bool_vector_type * ens_mask = NULL; + cv_enkf_init_update( bootstrap_data->cv_enkf_data , ens_mask , S_resampled , R , dObs , E , D); cv_enkf_initX( bootstrap_data->cv_enkf_data , X , A_resampled , S_resampled , R , dObs , E , D); } else std_enkf_initX(bootstrap_data->std_enkf_data , X , NULL , S_resampled,R, dObs, E,D ); @@ -518,6 +246,26 @@ bool bootstrap_enkf_set_bool( void * arg , const char * var_name , bool value) { } +bool bootstrap_enkf_has_var( const void * arg, const char * var_name) { + const bootstrap_enkf_data_type * module_data = bootstrap_enkf_data_safe_cast_const( arg ); + { + return std_enkf_has_var(module_data->std_enkf_data, var_name); + } +} + +double bootstrap_enkf_get_double( const void * arg, const char * var_name) { + const bootstrap_enkf_data_type * module_data = bootstrap_enkf_data_safe_cast_const( arg ); + { + return std_enkf_get_double( module_data->std_enkf_data , var_name); + } +} + +int bootstrap_enkf_get_int( const void * arg, const char * var_name) { + const bootstrap_enkf_data_type * module_data = bootstrap_enkf_data_safe_cast_const( arg ); + { + return std_enkf_get_int( module_data->std_enkf_data , var_name); + } +} @@ -543,8 +291,9 @@ analysis_table_type SYMBOL_TABLE = { .updateA = bootstrap_enkf_updateA, .init_update = NULL, .complete_update = NULL, - .has_var = NULL, - .get_int = NULL, - .get_double = NULL, + .has_var = bootstrap_enkf_has_var, + .get_int = bootstrap_enkf_get_int, + .get_double = bootstrap_enkf_get_double, + .get_bool = NULL, .get_ptr = NULL, }; diff --git a/ThirdParty/Ert/devel/libanalysis/src/cv_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/cv_enkf.c index 0226305705..015d990392 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/cv_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/cv_enkf.c @@ -63,6 +63,7 @@ struct cv_enkf_data_struct { static UTIL_SAFE_CAST_FUNCTION( cv_enkf_data , CV_ENKF_TYPE_ID ) +static UTIL_SAFE_CAST_FUNCTION_CONST( cv_enkf_data , CV_ENKF_TYPE_ID ) void cv_enkf_set_truncation( cv_enkf_data_type * data , double truncation ) { @@ -114,6 +115,7 @@ void cv_enkf_data_free( void * arg ) { matrix_safe_free( cv_data->Rp ); matrix_safe_free( cv_data->Dp ); } + free( cv_data ); } @@ -122,6 +124,7 @@ void cv_enkf_data_free( void * arg ) { void cv_enkf_init_update( void * arg , + const bool_vector_type * ens_mask , const matrix_type * S , const matrix_type * R , const matrix_type * dObs , @@ -643,6 +646,53 @@ long cv_enkf_get_options( void * arg , long flag) { } } +bool cv_enkf_has_var( const void * arg, const char * var_name) { + { + if (strcmp(var_name , ENKF_NCOMP_KEY_) == 0) + return true; + else if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return true; + else if (strcmp(var_name , NFOLDS_KEY) == 0) + return true; + else if (strcmp(var_name , CV_PEN_PRESS_KEY) == 0) + return true; + else + return false; + } +} + +double cv_enkf_get_double( const void * arg, const char * var_name) { + const cv_enkf_data_type * module_data = cv_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return module_data->truncation; + else + return -1; + } +} + +int cv_enkf_get_int( const void * arg, const char * var_name) { + const cv_enkf_data_type * module_data = cv_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_NCOMP_KEY_) == 0) + return module_data->subspace_dimension; + else if (strcmp(var_name , NFOLDS_KEY) == 0) + return module_data->nfolds; + else + return -1; + } +} + +bool cv_enkf_get_bool( const void * arg, const char * var_name) { + const cv_enkf_data_type * module_data = cv_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , CV_PEN_PRESS_KEY) == 0) + return module_data->penalised_press; + else + return false; + } +} + @@ -665,8 +715,9 @@ analysis_table_type SYMBOL_TABLE = { .updateA = NULL, .init_update = cv_enkf_init_update , .complete_update = cv_enkf_complete_update , - .has_var = NULL, - .get_int = NULL, - .get_double = NULL, + .has_var = cv_enkf_has_var, + .get_int = cv_enkf_get_int, + .get_double = cv_enkf_get_double, + .get_bool = cv_enkf_get_bool, .get_ptr = NULL, }; diff --git a/ThirdParty/Ert/devel/libanalysis/src/enkf_linalg.c b/ThirdParty/Ert/devel/libanalysis/src/enkf_linalg.c index 8d85ecd463..a82b1b04bc 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/enkf_linalg.c +++ b/ThirdParty/Ert/devel/libanalysis/src/enkf_linalg.c @@ -73,19 +73,19 @@ void enkf_linalg_genX2(matrix_type * X2 , const matrix_type * S , const matrix_t /*This function is similar to enkf_linalg_svdS but it returns the eigen values without its inverse and also give the matrices truncated U VT and Sig0*/ +// Trunc.SVD(S) = U0 * Sig0 * V0T int enkf_linalg_svd_truncation(const matrix_type * S , - double truncation , - int ncomp , - dgesvd_vector_enum store_V0T , - double * sig0, - matrix_type * U0 , - matrix_type * V0T) { + double truncation , + int ncomp , + dgesvd_vector_enum store_V0T , + double * sig0, + matrix_type * U0 , + matrix_type * V0T) { int num_significant = -1; int nrows = matrix_get_rows(S); int ncolumns= matrix_get_columns(S); - if (((truncation > 0) && (ncomp < 0)) || ((truncation < 0) && (ncomp > 0))) { @@ -95,7 +95,6 @@ int enkf_linalg_svd_truncation(const matrix_type * S , matrix_dgesvd(DGESVD_MIN_RETURN , store_V0T , workS , sig0 , U0 , V0T); matrix_free( workS ); } - int i; if (ncomp > 0) @@ -125,7 +124,7 @@ int enkf_linalg_svd_truncation(const matrix_type * S , matrix_resize(U0 , nrows , num_significant , true); matrix_resize(V0T , num_significant , ncolumns , true); } - else + else util_abort("%s: truncation:%g ncomp:%d - invalid ambigous input.\n",__func__ , truncation , ncomp ); return num_significant; } @@ -590,7 +589,8 @@ void enkf_linalg_get_PC( const matrix_type * S0, double truncation, int ncomp, matrix_type * PC, - matrix_type * PC_obs ) { + matrix_type * PC_obs, + double_vector_type * singular_values) { const int nrobs = matrix_get_rows( S0 ); const int nrens = matrix_get_columns( S0 ); @@ -598,10 +598,12 @@ void enkf_linalg_get_PC( const matrix_type * S0, matrix_type * U0 = matrix_alloc( nrobs , nrens ); matrix_type * S = matrix_alloc_copy( S0 ); - double * inv_sig0 = util_calloc( nrmin , sizeof * inv_sig0 ); - + double * inv_sig0; + + double_vector_iset( singular_values , nrmin - 1 , 0 ); matrix_subtract_row_mean( S ); ncomp = util_int_min( ncomp , nrmin ); + inv_sig0 = double_vector_get_ptr( singular_values ); { matrix_type * S_mean = matrix_alloc( nrobs , 1 ); int num_PC = enkf_linalg_svdS(S , truncation , ncomp, DGESVD_NONE , inv_sig0 , U0 , NULL); @@ -629,10 +631,11 @@ void enkf_linalg_get_PC( const matrix_type * S0, matrix_dgemm( PC_obs , U0 , S_mean , true , false , 1.0 , 0.0 ); } - + for (int i=0; i < double_vector_size( singular_values ); i++) + inv_sig0[i] = 1.0 / inv_sig0[i]; + matrix_free( S_mean ); } - free( inv_sig0 ); matrix_free( S ); matrix_free( U0 ); } @@ -641,147 +644,114 @@ void enkf_linalg_get_PC( const matrix_type * S0, void enkf_linalg_rml_enkfX1(matrix_type *X1, matrix_type *Udr, matrix_type *D, matrix_type *R) { - /*This routine computes X1 for RML_EnKF module as X1 = Ud(T)*Cd(-1/2)*D -- D= (dk-do) - here the negative sign cancels with one needed in X3 matrix computation*/ + /* + This routine computes X1 for RML_EnKF module as X1 = Ud(T)*Cd(-1/2)*D -- D= (dk-do) + here the negative sign cancels with one needed in X3 matrix computation + */ matrix_type * tmp = matrix_alloc(matrix_get_columns(Udr),matrix_get_rows(R)); - matrix_dgemm( tmp, Udr, R, true, false, 1.0, 0.0); - printf("tmp matrix is computed"); - matrix_dgemm( X1 , tmp, D,false,false, 1.0, 0.0); - printf("X1 is computed"); - matrix_free(tmp); + matrix_matmul_with_transpose( tmp, Udr, R, true, false); + matrix_matmul( X1 , tmp, D); + matrix_free(tmp); } -void enkf_linalg_rml_enkfX2(matrix_type *X2, double *Wdr, matrix_type * X1 ,double a, int nsign) + + +void enkf_linalg_rml_enkfX2(matrix_type *X2 , double *Wdr , matrix_type * X1 , double a , int nsign) { - /*This routine computes X2 for RML_EnKF module as X2 = ((a*Ipd)+Wd^2)^-1 * X1 */ - /* Since a+Ipd & Wd are diagonal in nature the computation is reduced to array operations*/ - double * tmp = util_calloc(nsign , sizeof * tmp ); + /* + This routine computes X2 for RML_EnKF module as X2 = ((a*Ipd)+Wd^2)^-1 * X1 + Since a+Ipd & Wd are diagonal in nature the computation is reduced to array operations + */ - for (int i=0; i< nsign ; i++) - { - tmp[i] = 1/ (a+ (Wdr[i]*Wdr[i])); - matrix_scale_row(X1,i,tmp[i]); - } + for (int i=0; i< nsign ; i++) { + double scale_factor = 1 / (a + (Wdr[i]*Wdr[i])); + matrix_scale_row(X1 , i , scale_factor); + } matrix_assign(X2,X1); - + } void enkf_linalg_rml_enkfX3(matrix_type *X3, matrix_type *VdTr, double *Wdr, matrix_type *X2, int nsign) { - /*This routine computes X3 for RML_EnKF module as X3 = Vd *Wd*X2 */ + /* + This routine computes X3 for RML_EnKF module as X3 = Vd *Wd*X2 + */ + + printf("\nWd: "); matrix_type *tmp = matrix_alloc_copy(VdTr); - matrix_matlab_dump(tmp, "matrixVdTrcopy.dat"); - printf("matrix X3 started"); - for (int i=0; i< nsign ; i++) - { - printf("The value of Wd(%d) is = %5.2f \n",i, Wdr[i]); - matrix_scale_row(tmp, i, Wdr[i]); - } + for (int i=0; i< nsign ; i++) { + printf("%5.2f ", Wdr[i]); + matrix_scale_row(tmp, i, Wdr[i]); + } + printf("\n\n"); - matrix_dgemm( X3 , tmp , X2 , true, false, 1.0, 0.0); + matrix_matmul_with_transpose( X3 , tmp , X2 , true, false); matrix_free(tmp); } -void enkf_linalg_rml_enkfdA(matrix_type * dA1, matrix_type * Dm, matrix_type * X3) //dA = Dm * X3 -{ - - matrix_dgemm (dA1, Dm, X3,false, false, 1.0, 0.0 ); - -} double enkf_linalg_data_mismatch(matrix_type *D , matrix_type *R , matrix_type *Sk) { matrix_type * tmp = matrix_alloc (matrix_get_columns(D), matrix_get_columns(R)); - double mean; - - printf("-----------------------------------------------------------------\n"); - printf("%s:%d Calling matrix_dgemm() \n",__func__ , __LINE__); - // C A B - matrix_dgemm(tmp, D, R,true, false, 1.0, 0.0); - printf("-----------------------------------------------------------------\n"); - printf("%s:%d Calling matrix_dgemm() \n",__func__ , __LINE__); - matrix_dgemm(Sk, tmp, D, false, false, 1.0, 0.0); - printf("-----------------------------------------------------------------\n"); - - printf("The data mismatch computed"); - + double mismatch; + matrix_matmul_with_transpose(tmp, D, R,true, false); // tmp = D' * R, i.e. N-by-p + matrix_matmul(Sk, tmp, D); // Sk = D' * R * D // Calculate the mismatch - mean = matrix_trace(Sk)/(matrix_get_columns(D)); - - return mean; + mismatch = matrix_trace(Sk)/(matrix_get_columns(D)); + + return mismatch; } +// Cd = SampCov(E) (including (N-1) normalization) void enkf_linalg_Covariance(matrix_type *Cd, const matrix_type *E, double nsc ,int nrobs) { - matrix_matlab_dump( E, "matrixE.dat"); - printf("Starting Dgemm for EE(T)\n"); - matrix_dgemm(Cd, E, E,false,true, 1.0, 0.0); - for (int i=0; i< nrobs; i++) - { - for (int j=0;j< nrobs; j++) - { - if (i!=j) - matrix_iset(Cd, i, j, 0.0); - - } + matrix_matmul_with_transpose(Cd, E, E,false,true); + for (int i=0; i< nrobs; i++) { + for (int j=0;j< nrobs; j++) { + if (i!=j) + matrix_iset(Cd, i, j, 0.0); } - nsc= nsc*nsc; - printf("nsc = %5.3f\n",nsc); + } + nsc = nsc*nsc; matrix_scale(Cd,nsc); } -void enkf_linalg_rml_enkfAm(matrix_type * Um, double * Wm,int nsign1){ - for (int i=0; i< nsign1 ; i++) - { - double sc = 1/ Wm[i]; - matrix_scale_column(Um, i, sc); - } -} - -void enkf_linalg_rml_enkfX4 (matrix_type *X4,matrix_type *Am, matrix_type *A){ - - matrix_dgemm(X4, Am, A, true, false, 1.0, 0.0); -} - -void enkf_linalg_rml_enkfX5(matrix_type * X5,matrix_type * Am, matrix_type * X4){ - - matrix_dgemm (X5, Am, X4, false,false,1.0,0.0); +// Scale columns (not rows!) of Um by entries in diagonal Wm +void enkf_linalg_rml_enkfAm(matrix_type * Um, const double * Wm,int nsign1){ + for (int i=0; i< nsign1 ; i++) { + double sc = 1 / Wm[i]; + matrix_scale_column(Um, i, sc); + } } -void enkf_linalg_rml_enkfX6(matrix_type * X6, matrix_type * Dk, matrix_type * X5){ - matrix_dgemm(X6, Dk, X5, true, false, 1.0, 0.0); -} void enkf_linalg_rml_enkfX7(matrix_type * X7, matrix_type * VdT, double * Wdr, double a, matrix_type * X6){ int nsign = matrix_get_rows(VdT); - int ens_size= matrix_get_columns(VdT); - matrix_type *tmp1= matrix_alloc_copy(VdT); - matrix_type *tmp2= matrix_alloc(ens_size,ens_size); + int ens_size = matrix_get_columns(VdT); + matrix_type *tmp1 = matrix_alloc_copy(VdT); + matrix_type *tmp2 = matrix_alloc(ens_size,ens_size); - for (int i=0; i< nsign ; i++) - { - double tmp = 1/ ( a + (Wdr[i]*Wdr[i])); - matrix_scale_row(tmp1, i ,tmp); - } - - matrix_dgemm(tmp2, tmp1, VdT, true, false, 1.0, 0.0); + + for (int i=0; i < nsign ; i++) { + double scale_factor = 1 / ( a + (Wdr[i]*Wdr[i])); + matrix_scale_row( tmp1 , i , scale_factor); + } + + + matrix_matmul_with_transpose(tmp2, tmp1, VdT, true, false); + matrix_matmul(X7, tmp2, X6); matrix_free(tmp1); - matrix_dgemm(X7, tmp2, X6, false,false, 1.0, 0.0); matrix_free(tmp2); } -void enkf_linalg_rml_enkfXdA2(matrix_type * dA2, matrix_type * Dk,matrix_type * X7){ - - matrix_dgemm(dA2, Dk, X7, false, false, 1.0, 0.0); -} diff --git a/ThirdParty/Ert/devel/libanalysis/src/fwd_step_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/fwd_step_enkf.c index 7ac42dc493..ebd186a0d2 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/fwd_step_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/fwd_step_enkf.c @@ -20,7 +20,8 @@ #include #include #include - + +#include #include #include #include @@ -50,7 +51,7 @@ struct fwd_step_enkf_data_struct { }; - +static UTIL_SAFE_CAST_FUNCTION_CONST( fwd_step_enkf_data , FWD_STEP_ENKF_TYPE_ID ) static UTIL_SAFE_CAST_FUNCTION( fwd_step_enkf_data , FWD_STEP_ENKF_TYPE_ID ) @@ -177,6 +178,7 @@ void fwd_step_enkf_data_free( void * arg ) { } } } + free( fwd_step_data ); } @@ -217,6 +219,37 @@ long fwd_step_enkf_get_options( void * arg , long flag) { } } +bool fwd_step_enkf_has_var( const void * arg, const char * var_name) { + { + if (strcmp(var_name , NFOLDS_KEY) == 0) + return true; + else if (strcmp(var_name , R2_LIMIT_KEY ) == 0) + return true; + else + return false; + } +} + +double fwd_step_enkf_get_double( const void * arg, const char * var_name) { + const fwd_step_enkf_data_type * module_data = fwd_step_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , R2_LIMIT_KEY ) == 0) + return module_data->r2_limit; + else + return -1; + } +} + +int fwd_step_enkf_get_int( const void * arg, const char * var_name) { + const fwd_step_enkf_data_type * module_data = fwd_step_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , NFOLDS_KEY) == 0) + return module_data->nfolds; + else + return -1; + } +} + @@ -239,9 +272,10 @@ analysis_table_type SYMBOL_TABLE = { .updateA = fwd_step_enkf_updateA, .init_update = NULL , .complete_update = NULL , - .has_var = NULL , - .get_int = NULL , - .get_double = NULL , + .has_var = fwd_step_enkf_has_var, + .get_int = fwd_step_enkf_get_int , + .get_double = fwd_step_enkf_get_double , + .get_bool = NULL , .get_ptr = NULL }; diff --git a/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c index 7f1fabe26b..e5a991bb70 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c @@ -48,6 +48,7 @@ typedef struct { static UTIL_SAFE_CAST_FUNCTION( sqrt_enkf_data , SQRT_ENKF_TYPE_ID ) +static UTIL_SAFE_CAST_FUNCTION_CONST( sqrt_enkf_data , SQRT_ENKF_TYPE_ID ) void * sqrt_enkf_data_alloc( rng_type * rng ) { @@ -164,6 +165,27 @@ void sqrt_enkf_complete_update( void * arg ) { } } +bool sqrt_enkf_has_var( const void * arg, const char * var_name) { + const sqrt_enkf_data_type * module_data = sqrt_enkf_data_safe_cast_const( arg ); + { + return std_enkf_has_var(module_data->std_data, var_name); + } +} + +double sqrt_enkf_get_double( const void * arg, const char * var_name) { + const sqrt_enkf_data_type * module_data = sqrt_enkf_data_safe_cast_const( arg ); + { + return std_enkf_get_double( module_data->std_data , var_name); + } +} + +int sqrt_enkf_get_int( const void * arg, const char * var_name) { + const sqrt_enkf_data_type * module_data = sqrt_enkf_data_safe_cast_const( arg ); + { + return std_enkf_get_int( module_data->std_data , var_name); + } +} + /*****************************************************************/ @@ -189,9 +211,10 @@ analysis_table_type SYMBOL_TABLE = { .init_update = sqrt_enkf_init_update, .complete_update = sqrt_enkf_complete_update, .get_options = sqrt_enkf_get_options, - .has_var = NULL, - .get_int = NULL, - .get_double = NULL, + .has_var = sqrt_enkf_has_var, + .get_int = sqrt_enkf_get_int, + .get_double = sqrt_enkf_get_double, + .get_bool = NULL, .get_ptr = NULL }; diff --git a/ThirdParty/Ert/devel/libanalysis/src/std_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/std_enkf.c index 4f64dccf8f..e057e83f34 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/std_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/std_enkf.c @@ -86,6 +86,8 @@ struct std_enkf_data_struct { long option_flags; }; +static UTIL_SAFE_CAST_FUNCTION_CONST( std_enkf_data , STD_ENKF_TYPE_ID ) + /* This is a macro which will expand to generate a function: @@ -229,6 +231,36 @@ long std_enkf_get_options( void * arg , long flag ) { } } +bool std_enkf_has_var( const void * arg, const char * var_name) { + { + if (strcmp(var_name , ENKF_NCOMP_KEY_) == 0) + return true; + else if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return true; + else + return false; + } +} + +double std_enkf_get_double( const void * arg, const char * var_name) { + const std_enkf_data_type * module_data = std_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_TRUNCATION_KEY_) == 0) + return module_data->truncation; + else + return -1; + } +} + +int std_enkf_get_int( const void * arg, const char * var_name) { + const std_enkf_data_type * module_data = std_enkf_data_safe_cast_const( arg ); + { + if (strcmp(var_name , ENKF_NCOMP_KEY_) == 0) + return module_data->subspace_dimension; + else + return -1; + } +} /** @@ -257,9 +289,10 @@ analysis_table_type SYMBOL_TABLE = { .updateA = NULL, .init_update = NULL, .complete_update = NULL, - .has_var = NULL, - .get_int = NULL, - .get_double = NULL, + .has_var = std_enkf_has_var, + .get_int = std_enkf_get_int, + .get_double = std_enkf_get_double, + .get_bool = NULL, .get_ptr = NULL, }; diff --git a/ThirdParty/Ert/devel/libanalysis/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libanalysis/tests/CMakeLists.txt index d92b4fcc32..0bc9f72f8d 100644 --- a/ThirdParty/Ert/devel/libanalysis/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libanalysis/tests/CMakeLists.txt @@ -1,10 +1,19 @@ -if (BUILD_APPLICATIONS) - add_test( analysis_module_test_RML ${EXECUTABLE_OUTPUT_PATH}/ert_module_test ${LIBRARY_OUTPUT_PATH}/rml_enkf.so ) - add_test( analysis_module_test_RMLI ${EXECUTABLE_OUTPUT_PATH}/ert_module_test ${LIBRARY_OUTPUT_PATH}/rmli_enkf.so ) -endif() +ert_module_name( VAR_RML rml_enkf ${LIBRARY_OUTPUT_PATH} ) add_executable(analysis_test_external_module analysis_test_external_module.c ) target_link_libraries( analysis_test_external_module analysis util test_util ) -add_test( analysis_module_rml ${EXECUTABLE_OUTPUT_PATH}/analysis_test_external_module "RML_ENKF" ${LIBRARY_OUTPUT_PATH}/rml_enkf.so 41 ITER LAMBDA0) -add_test( analysis_module_rmli ${EXECUTABLE_OUTPUT_PATH}/analysis_test_external_module "RMLI_ENKF" ${LIBRARY_OUTPUT_PATH}/rmli_enkf.so 41 ITER) +add_test( analysis_module_rml ${EXECUTABLE_OUTPUT_PATH}/analysis_test_external_module "RML_ENKF" ${VAR_RML} 41 + ITER:45 + USE_PRIOR:False + LAMBDA_REDUCE:0.10 + LAMBDA_INCREASE:2.5 + ENKF_TRUNCATION:0.77 + LAMBDA0:0.25 + LAMBDA_MIN:0.01 + LOG_FILE:LogFile.txt + CLEAR_LOG:True + LAMBDA_RECALCULATE:True ) + + + diff --git a/ThirdParty/Ert/devel/libanalysis/tests/analysis_test_external_module.c b/ThirdParty/Ert/devel/libanalysis/tests/analysis_test_external_module.c index 29809a5575..31252199f3 100644 --- a/ThirdParty/Ert/devel/libanalysis/tests/analysis_test_external_module.c +++ b/ThirdParty/Ert/devel/libanalysis/tests/analysis_test_external_module.c @@ -26,6 +26,49 @@ +void test_set_get(analysis_module_type * module , const char * var_value) { + char * var , *string_value; + util_binary_split_string( var_value , ":" , false , &var , &string_value); + + if (var && string_value) { + printf("Testing variable:%s \n",var); + while (true) { + int int_value; + double double_value; + bool bool_value; + test_assert_true(analysis_module_has_var( module , var )); + + if (util_sscanf_int( string_value , &int_value)) { + test_assert_true(analysis_module_set_var( module , var , string_value )); + test_assert_int_equal( int_value , analysis_module_get_int( module , var )); + break; + } + + if (util_sscanf_double( string_value , &double_value)) { + test_assert_true(analysis_module_set_var( module , var , string_value )); + test_assert_double_equal( double_value , analysis_module_get_double( module , var )); + break; + } + + if (util_sscanf_bool( string_value , &bool_value)) { + test_assert_true(analysis_module_set_var( module , var , string_value )); + test_assert_bool_equal( bool_value , analysis_module_get_bool( module , var )); + break; + } + + + test_assert_true(analysis_module_set_var( module , var , string_value )); + test_assert_string_equal( string_value , (const char *) analysis_module_get_ptr( module , var )); + break; + } + } else { + fprintf(stderr,"Invalid test input data: %s -> could not split in var:value\n" , var_value); + exit(1); + } +} + + + void load_module( rng_type * rng , const char * user_name , const char * lib_name, const char * options_str , int nvar , const char ** var_list) { long flags = strtol(options_str , NULL , 10); analysis_module_type * analysis_module = analysis_module_alloc_external(rng , user_name , lib_name); @@ -36,9 +79,9 @@ void load_module( rng_type * rng , const char * user_name , const char * lib_nam test_assert_string_equal( lib_name , analysis_module_get_lib_name(analysis_module)); test_assert_true( analysis_module_is_instance( analysis_module)); - for (int i=0; i < nvar; i++) { - printf("has_var(%s) \n" , var_list[i]); - test_assert_true( analysis_module_has_var(analysis_module , var_list[i])); + { + for (int i=0; i < nvar; i++) + test_set_get( analysis_module , var_list[i] ); } test_assert_false( analysis_module_has_var(analysis_module , "DoesNotHaveThisVariable")); diff --git a/ThirdParty/Ert/devel/libconfig/include/ert/config/config.h b/ThirdParty/Ert/devel/libconfig/include/ert/config/config.h index 08b110b46a..3a816aa70e 100644 --- a/ThirdParty/Ert/devel/libconfig/include/ert/config/config.h +++ b/ThirdParty/Ert/devel/libconfig/include/ert/config/config.h @@ -28,6 +28,7 @@ extern "C" { #include #include +#include #include #include @@ -104,6 +105,7 @@ typedef struct config_struct config_type; const char * config_get_config_file( const config_type * config , bool abs_path); void config_fprintf_errors( const config_type * config , bool add_count , FILE * stream ); + const subst_list_type * config_get_define_list( const config_type * config); int config_get_schema_size( const config_type * config ); int config_get_content_size( const config_type * config ); const config_content_node_type * config_iget_content_node( const config_type * config , int index ); diff --git a/ThirdParty/Ert/devel/libconfig/src/config.c b/ThirdParty/Ert/devel/libconfig/src/config.c index 705b93f781..5fbf2ef921 100644 --- a/ThirdParty/Ert/devel/libconfig/src/config.c +++ b/ThirdParty/Ert/devel/libconfig/src/config.c @@ -261,6 +261,10 @@ config_type * config_alloc() { +const subst_list_type * config_get_define_list( const config_type * config) { + return config->define_list; +} + static void config_clear_content_items( config_type * config ) { hash_free( config->content_items ); @@ -302,6 +306,11 @@ void config_free(config_type * config) { hash_free(config->content_items); hash_free(config->messages); + util_safe_free( config->config_file ); + util_safe_free( config->abs_path ); + if (config->invoke_path != NULL) + config_root_path_free( config->invoke_path ); + free(config); } diff --git a/ThirdParty/Ert/devel/libconfig/src/config_content_item.c b/ThirdParty/Ert/devel/libconfig/src/config_content_item.c index 4b07fcbe7b..f07c1da2de 100644 --- a/ThirdParty/Ert/devel/libconfig/src/config_content_item.c +++ b/ThirdParty/Ert/devel/libconfig/src/config_content_item.c @@ -92,9 +92,11 @@ char * config_content_item_alloc_joined_string(const config_content_item_type * char * joined_string = NULL; for (int i =0; i < occurences ; i++) { - joined_string = util_strcat_realloc( joined_string , config_content_item_ialloc_joined_string(item , sep , i)); + char * element = config_content_item_ialloc_joined_string(item , sep , i); + joined_string = util_strcat_realloc( joined_string , element); if (i < (occurences - 1)) joined_string = util_strcat_realloc( joined_string , sep ); + free( element ); } return joined_string; diff --git a/ThirdParty/Ert/devel/libconfig/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libconfig/tests/CMakeLists.txt index d6854e88cf..03477b9423 100644 --- a/ThirdParty/Ert/devel/libconfig/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libconfig/tests/CMakeLists.txt @@ -28,6 +28,9 @@ target_link_libraries( config_content_item config test_util ) add_executable( config_argc config_argc.c) target_link_libraries( config_argc config test_util ) +add_executable( config_define config_define.c) +target_link_libraries( config_define config test_util ) + add_executable( config_error config_error.c) target_link_libraries( config_error config test_util ) add_test( config_error ${EXECUTABLE_OUTPUT_PATH}/config_error ) @@ -45,6 +48,7 @@ add_test( config_typeOK ${EXECUTABLE_OUTPUT_PATH}/config_typeOK ${C add_test( config_typeFail ${EXECUTABLE_OUTPUT_PATH}/config_typeFail ${CMAKE_CURRENT_SOURCE_DIR}/data/type_testFail ) add_test( config_append_test ${EXECUTABLE_OUTPUT_PATH}/config_append_test ${CMAKE_CURRENT_SOURCE_DIR}/data/append_test ) add_test( config_node_test ${EXECUTABLE_OUTPUT_PATH}/config_node_test ${CMAKE_CURRENT_SOURCE_DIR}/data/append_test ) +add_test( config_define ${EXECUTABLE_OUTPUT_PATH}/config_define ${CMAKE_CURRENT_SOURCE_DIR}/data/define_test ) add_test( config_path_elm ${EXECUTABLE_OUTPUT_PATH}/config_path_elm ) add_test( config_content_node ${EXECUTABLE_OUTPUT_PATH}/config_content_node ) add_test( config_content_item ${EXECUTABLE_OUTPUT_PATH}/config_content_item ${CMAKE_CURRENT_SOURCE_DIR}/data/content_item_test) diff --git a/ThirdParty/Ert/devel/libconfig/tests/config_define.c b/ThirdParty/Ert/devel/libconfig/tests/config_define.c new file mode 100644 index 0000000000..d93dab6a8f --- /dev/null +++ b/ThirdParty/Ert/devel/libconfig/tests/config_define.c @@ -0,0 +1,69 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'config_define.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include +#include +#include + +#include +#include +#include +#include + + +void test_define(config_type * config , const char * config_file) { + test_assert_true( config_parse( config , config_file , NULL , NULL , "DEFINE" , CONFIG_UNRECOGNIZED_IGNORE , true )); + { + const subst_list_type * define_list = config_get_define_list( config ); + test_assert_true( subst_list_has_key( define_list , "VAR1")); + test_assert_true( subst_list_has_key( define_list , "VAR2")); + test_assert_true( subst_list_has_key( define_list , "VARX")); + test_assert_false( subst_list_has_key( define_list , "VARY")); + + + test_assert_string_equal( subst_list_get_value( define_list , "VAR1") , "100"); + test_assert_string_equal( subst_list_get_value( define_list , "VAR2") , "10"); + test_assert_string_equal( subst_list_get_value( define_list , "VARX") , "1"); + } +} + + + +config_type * config_create_schema() { + config_type * config = config_alloc(); + + config_add_schema_item( config , "SET" , true ); + config_add_schema_item( config , "NOTSET" , false ); + + return config; +} + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + config_type * config = config_create_schema(); + + test_define( config , config_file ); + + config_free( config ); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libconfig/tests/data/define_test b/ThirdParty/Ert/devel/libconfig/tests/data/define_test new file mode 100644 index 0000000000..6976c4853f --- /dev/null +++ b/ThirdParty/Ert/devel/libconfig/tests/data/define_test @@ -0,0 +1,5 @@ +DEFINE VAR1 100 +DEFINE VAR2 10 +DEFINE VARX 1 + +SET VAR1 100 diff --git a/ThirdParty/Ert/devel/libecl/applications/esummary.c b/ThirdParty/Ert/devel/libecl/applications/esummary.c index 4ecb00b189..245123f780 100644 --- a/ThirdParty/Ert/devel/libecl/applications/esummary.c +++ b/ThirdParty/Ert/devel/libecl/applications/esummary.c @@ -52,7 +52,7 @@ int main(int argc , char ** argv) { if (argc < 3) usage(); { - ecl_sum_type * first_ecl_sum; /* This governs the timing */ + ecl_sum_type * first_ecl_sum = NULL; /* This governs the timing */ vector_type * ecl_sum_list = vector_alloc_new(); time_interval_type * time_union = NULL; time_interval_type * time_intersect = NULL; @@ -74,30 +74,32 @@ int main(int argc , char ** argv) { util_alloc_file_components( argv[iarg] , &path , &basename , NULL); fprintf(stderr,"Loading case: %s/%s" , path , basename); fflush(stderr); ecl_sum = ecl_sum_fread_alloc_case( argv[iarg] , ":"); - - if (iarg == 1) { - first_ecl_sum = ecl_sum; /* Keep track of this - might sort the vector */ - time_union = time_interval_alloc_copy( ecl_sum_get_sim_time( ecl_sum )); - time_intersect = time_interval_alloc_copy( ecl_sum_get_sim_time( ecl_sum )); - - if (use_time_union) - time = time_union; - else - time = time_intersect; - vector_append_owned_ref( ecl_sum_list , ecl_sum , ecl_sum_free__ ); - } else { - const time_interval_type * ti = ecl_sum_get_sim_time( ecl_sum ); - if (time_interval_has_overlap(time , ti)) { - time_interval_intersect( time_intersect , ti ); - time_interval_extend( time_union , ti ); + if (ecl_sum) { + if (first_ecl_sum == NULL) { + first_ecl_sum = ecl_sum; /* Keep track of this - might sort the vector */ + time_union = time_interval_alloc_copy( ecl_sum_get_sim_time( ecl_sum )); + time_intersect = time_interval_alloc_copy( ecl_sum_get_sim_time( ecl_sum )); - vector_append_owned_ref( ecl_sum_list , ecl_sum , ecl_sum_free__ ); - load_count++; + if (use_time_union) + time = time_union; + else + time = time_intersect; + vector_append_owned_ref( ecl_sum_list , ecl_sum , ecl_sum_free__ ); } else { - fprintf(stderr,"** Warning case:%s has no time overlap - discarded \n",ecl_sum_get_case( ecl_sum )); - ecl_sum_free( ecl_sum ); + const time_interval_type * ti = ecl_sum_get_sim_time( ecl_sum ); + if (time_interval_has_overlap(time , ti)) { + time_interval_intersect( time_intersect , ti ); + time_interval_extend( time_union , ti ); + + vector_append_owned_ref( ecl_sum_list , ecl_sum , ecl_sum_free__ ); + load_count++; + } else { + fprintf(stderr,"** Warning case:%s has no time overlap - discarded \n",ecl_sum_get_case( ecl_sum )); + ecl_sum_free( ecl_sum ); + } } - } + } else + fprintf(stderr," --- no data found?!"); iarg++; fprintf(stderr,"\n"); diff --git a/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c b/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c index e9e05964be..be11b7da79 100644 --- a/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c +++ b/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c @@ -44,7 +44,7 @@ int main(int argc, char ** argv) { stream = stdout; ecl_grid = ecl_grid_alloc(grid_file); - ecl_grid_dump_ascii( ecl_grid , false , stream ); + ecl_grid_dump_ascii( ecl_grid , true , stream ); if (output_file != NULL) fclose( stream ); diff --git a/ThirdParty/Ert/devel/libecl/applications/grid_info.c b/ThirdParty/Ert/devel/libecl/applications/grid_info.c index beaf441290..ad19535881 100644 --- a/ThirdParty/Ert/devel/libecl/applications/grid_info.c +++ b/ThirdParty/Ert/devel/libecl/applications/grid_info.c @@ -42,7 +42,7 @@ int main(int argc, char ** argv) { if (argc >= 3) { ecl_grid_type * grid2 = ecl_grid_alloc( argv[2] ); - if (ecl_grid_compare( ecl_grid , grid2 , true , false)) + if (ecl_grid_compare( ecl_grid , grid2 , true , false , false)) printf("\nThe grids %s %s are IDENTICAL.\n" , argv[1] , argv[2]); else { printf("\n"); diff --git a/ThirdParty/Ert/devel/libecl/applications/load_test.c b/ThirdParty/Ert/devel/libecl/applications/load_test.c index 9a02887de2..a8b04122ed 100644 --- a/ThirdParty/Ert/devel/libecl/applications/load_test.c +++ b/ThirdParty/Ert/devel/libecl/applications/load_test.c @@ -20,65 +20,87 @@ #include #include + #include #include #include + void test_case( const char * base , bool load_all) { - timer_type * ti = timer_alloc(false); - timer_type * tr = timer_alloc(false); - timer_type * tg = timer_alloc(false); - - char * grid_file = ecl_util_alloc_filename( NULL , base , ECL_EGRID_FILE , false , 0 ); - char * init_file = ecl_util_alloc_filename( NULL , base , ECL_INIT_FILE , false , 0 ); - char * restart_file = ecl_util_alloc_filename( NULL , base , ECL_UNIFIED_RESTART_FILE , false , 0 ); - - ecl_grid_type * grid; - ecl_file_type * restart; - ecl_file_type * init; - - - timer_start( tg ); - grid = ecl_grid_alloc(grid_file ); - timer_stop( tg ); - - timer_start( ti ); - init = ecl_file_open( init_file , 0); - if (load_all) - ecl_file_load_all( init ); - timer_stop( ti ); - - timer_start( tr ); - restart = ecl_file_open( restart_file , 0); - if (load_all) - ecl_file_load_all( restart ); - timer_stop( tr ); - - - printf("%-64s Restart:%8.4f Grid:%8.4f Init:%8.4f \n", - base, - timer_get_total_time( tr ), - timer_get_total_time( tg ), - timer_get_total_time( ti )); - - timer_free( tr ); - timer_free( ti ); - timer_free( tg ); - ecl_file_close( init ); - ecl_file_close( restart ); - ecl_grid_free( grid ); - free( grid_file ); - free( init_file ); - free( restart_file ); + timer_type * ti = timer_alloc(false); + timer_type * tr = timer_alloc(false); + timer_type * tg = timer_alloc(false); + + char * grid_file = NULL; + char * init_file = NULL; + char * restart_file = NULL; + +// grid_file = ecl_util_alloc_filename( NULL , base , ECL_EGRID_FILE , false , 0 ); +// init_file = ecl_util_alloc_filename( NULL , base , ECL_INIT_FILE , false , 0 ); + restart_file = ecl_util_alloc_filename( NULL , base , ECL_UNIFIED_RESTART_FILE , false , 0 ); + + + timer_start( tg ); + if (grid_file) + { + ecl_grid_type * grid = NULL; + grid = ecl_grid_alloc(grid_file ); + ecl_grid_free( grid ); + } + timer_stop( tg ); + + timer_start( ti ); + if (init_file) + { + ecl_file_type * init = NULL; + init = ecl_file_open( init_file , 0); + if (load_all) + { + ecl_file_load_all( init ); + } + ecl_file_close( init ); + } + timer_stop( ti ); + + timer_start( tr ); + if (restart_file) + { + ecl_file_type * restart = NULL; + restart = ecl_file_open( restart_file , 0); + if (load_all) + { + ecl_file_load_all( restart ); + } + ecl_file_close( restart ); + } + timer_stop( tr ); + + + printf("%-64s Restart:%8.4f Grid:%8.4f Init:%8.4f \n", + base, + timer_get_total_time( tr ), + timer_get_total_time( tg ), + timer_get_total_time( ti )); + + timer_free( tr ); + timer_free( ti ); + timer_free( tg ); + free( grid_file ); + free( init_file ); + free( restart_file ); } int main(int argc, char ** argv) { - bool load_all = true; + bool load_all = false; int i; + +// system("pause"); + for (i=1; i < argc; i++) test_case( argv[i] , load_all); - + + system("pause"); } diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_coarse_cell.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_coarse_cell.h index b9099dbd39..1dfa8f8dc7 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_coarse_cell.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_coarse_cell.h @@ -26,6 +26,7 @@ extern "C" { typedef struct ecl_coarse_cell_struct ecl_coarse_cell_type; + bool ecl_coarse_cell_equal( const ecl_coarse_cell_type * coarse_cell1 , const ecl_coarse_cell_type * coarse_cell2); ecl_coarse_cell_type * ecl_coarse_cell_alloc( ); void ecl_coarse_cell_update( ecl_coarse_cell_type * coarse_cell , int i , int j , int k , int global_index ); void ecl_coarse_cell_free( ecl_coarse_cell_type * coarse_cell ); @@ -49,7 +50,7 @@ extern "C" { int ecl_coarse_cell_iget_active_cell_index( const ecl_coarse_cell_type * coarse_cell , int index); int ecl_coarse_cell_iget_active_value( const ecl_coarse_cell_type * coarse_cell , int index); int ecl_coarse_cell_get_num_active( const ecl_coarse_cell_type * coarse_cell); - void ecl_coarse_cell_fprintf( ecl_coarse_cell_type * coarse_cell , FILE * stream ); + void ecl_coarse_cell_fprintf( const ecl_coarse_cell_type * coarse_cell , FILE * stream ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_endian_flip.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_endian_flip.h index 3fb762067a..e2c27159ee 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_endian_flip.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_endian_flip.h @@ -36,8 +36,6 @@ extern "C" { */ #define ECLIPSE_BYTE_ORDER __BIG_ENDIAN // Alternatively: __LITTLE_ENDIAN -#define WIN32 1 - #ifdef BYTE_ORDER #if BYTE_ORDER == ECLIPSE_BYTE_ORDER diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file.h index 8344e0acdc..905b99d2ec 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file.h @@ -83,6 +83,7 @@ extern "C" { bool ecl_file_writable( const ecl_file_type * ecl_file ); int ecl_file_get_flags( const ecl_file_type * ecl_file ); + void ecl_file_set_flags( ecl_file_type * ecl_file, int new_flags ); bool ecl_file_flags_set( const ecl_file_type * ecl_file , int flags); @@ -96,7 +97,8 @@ extern "C" { ecl_kw_type * ecl_file_iget_named_kw( const ecl_file_type * file , const char * kw, int ith); ecl_type_enum ecl_file_iget_named_type( const ecl_file_type * file , const char * kw , int ith); int ecl_file_iget_named_size( const ecl_file_type * file , const char * kw , int ith); - + void ecl_file_indexed_read(const ecl_file_type * file , const char * kw, int index, const int_vector_type * index_map, char* buffer); + bool ecl_file_subselect_block( ecl_file_type * ecl_file , const char * kw , int occurence); bool ecl_file_select_block( ecl_file_type * ecl_file , const char * kw , int occurence); @@ -118,7 +120,9 @@ extern "C" { bool ecl_file_select_rstblock_sim_time( ecl_file_type * ecl_file , time_t sim_time); bool ecl_file_select_rstblock_report_step( ecl_file_type * ecl_file , int report_step); bool ecl_file_iselect_rstblock( ecl_file_type * ecl_file , int seqnum_index ); - + + void ecl_file_close_fortio_stream(ecl_file_type * ecl_file); + ecl_file_type * ecl_file_open_rstblock_report_step( const char * filename , int report_step , int flags); ecl_file_type * ecl_file_open_rstblock_sim_time( const char * filename , time_t sim_time , int flags); ecl_file_type * ecl_file_iopen_rstblock( const char * filename , int seqnum_index , int flags); diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file_kw.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file_kw.h index e2f10ea252..3f5c1d2142 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file_kw.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_file_kw.h @@ -46,6 +46,7 @@ typedef struct inv_map_struct inv_map_type; const char * ecl_file_kw_get_header( const ecl_file_kw_type * file_kw ); int ecl_file_kw_get_size( const ecl_file_kw_type * file_kw ); ecl_type_enum ecl_file_kw_get_type( const ecl_file_kw_type * file_kw); + offset_type ecl_file_kw_get_offset(const ecl_file_kw_type * file_kw); bool ecl_file_kw_ptr_eq( const ecl_file_kw_type * file_kw , const ecl_kw_type * ecl_kw); void ecl_file_kw_replace_kw( ecl_file_kw_type * file_kw , fortio_type * target , ecl_kw_type * new_kw ); void ecl_file_kw_fskip_data( const ecl_file_kw_type * file_kw , fortio_type * fortio); diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_grid.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_grid.h index da2aba9d3f..76a690111f 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_grid.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_grid.h @@ -50,9 +50,11 @@ extern "C" { void ecl_grid_get_column_property(const ecl_grid_type * ecl_grid , const ecl_kw_type * ecl_kw , int i , int j, double_vector_type * column); int ecl_grid_get_global_index_from_xy_top( const ecl_grid_type * ecl_grid , double x , double y); int ecl_grid_get_global_index_from_xy_bottom( const ecl_grid_type * ecl_grid , double x , double y); - - void ecl_grid_get_corner_xyz3(const ecl_grid_type * grid , int i , int j , int k, int corner_nr , double * xpos , double * ypos , double * zpos ); - void ecl_grid_get_corner_xyz1(const ecl_grid_type * grid , int global_index , int corner_nr , double * xpos , double * ypos , double * zpos ); + ecl_grid_type * ecl_grid_alloc_dx_dy_dz_tops( int nx, int ny , int nz , const double * dx , const double * dy , const double * dz , const double * tops , const int * actnum); + + void ecl_grid_get_cell_corner_xyz3(const ecl_grid_type * grid , int i , int j , int k, int corner_nr , double * xpos , double * ypos , double * zpos ); + void ecl_grid_get_cell_corner_xyz1(const ecl_grid_type * grid , int global_index , int corner_nr , double * xpos , double * ypos , double * zpos ); + void ecl_grid_get_corner_xyz(const ecl_grid_type * grid , int i , int j , int k, double * xpos , double * ypos , double * zpos ); double ecl_grid_get_cell_thickness3( const ecl_grid_type * grid , int i , int j , int k); double ecl_grid_get_cell_thickness1( const ecl_grid_type * grid , int global_index ); @@ -63,6 +65,7 @@ extern "C" { bool ecl_grid_cell_contains_xyz1( const ecl_grid_type * ecl_grid , int global_index , double x , double y , double z); bool ecl_grid_cell_contains_xyz3( const ecl_grid_type * ecl_grid , int i , int j , int k, double x , double y , double z ); double ecl_grid_get_cell_volume1( const ecl_grid_type * ecl_grid, int global_index ); + double ecl_grid_get_cell_volume1_tskille( const ecl_grid_type * ecl_grid, int global_index ); double ecl_grid_get_cell_volume3( const ecl_grid_type * ecl_grid, int i , int j , int k); bool ecl_grid_cell_contains1(const ecl_grid_type * grid , int global_index , double x , double y , double z); bool ecl_grid_cell_contains3(const ecl_grid_type * grid , int i , int j ,int k , double x , double y , double z); @@ -90,6 +93,7 @@ extern "C" { ecl_grid_type * ecl_grid_alloc_rectangular( int nx , int ny , int nz , double dx , double dy , double dz , const int * actnum); ecl_grid_type * ecl_grid_alloc_regular( int nx, int ny , int nz , const double * ivec, const double * jvec , const double * kvec , const int * actnum); ecl_grid_type * ecl_grid_alloc_dxv_dyv_dzv( int nx, int ny , int nz , const double * dxv , const double * dyv , const double * dzv , const int * actnum); + ecl_grid_type * ecl_grid_alloc_dxv_dyv_dzv_depthz( int nx, int ny , int nz , const double * dxv , const double * dyv , const double * dzv , const double * depthz , const int * actnum); bool ecl_grid_exists( const char * case_input ); char * ecl_grid_alloc_case_filename( const char * case_input ); @@ -112,7 +116,7 @@ extern "C" { void ecl_grid_get_xyz1(const ecl_grid_type * grid , int global_index , double *xpos , double *ypos , double *zpos); void ecl_grid_get_xyz1A(const ecl_grid_type * grid , int active_index , double *xpos , double *ypos , double *zpos); int ecl_grid_get_global_size( const ecl_grid_type * ecl_grid ); - bool ecl_grid_compare(const ecl_grid_type * g1 , const ecl_grid_type * g2 , bool include_lgr, bool verbose); + bool ecl_grid_compare(const ecl_grid_type * g1 , const ecl_grid_type * g2 , bool include_lgr, bool include_nnc , bool verbose); int ecl_grid_get_active_size( const ecl_grid_type * ecl_grid ); double ecl_grid_get_bottom1(const ecl_grid_type * grid , int global_index); @@ -136,8 +140,10 @@ extern "C" { double ecl_grid_cell_invalid1A(const ecl_grid_type * grid , int active_index); void ecl_grid_dump(const ecl_grid_type * grid , FILE * stream); - void ecl_grid_dump_ascii(const ecl_grid_type * grid , bool active_only , FILE * stream); - + void ecl_grid_dump_ascii(ecl_grid_type * grid , bool active_only , FILE * stream); + void ecl_grid_dump_ascii_cell1(ecl_grid_type * grid , int global_index , FILE * stream, const double * offset); + void ecl_grid_dump_ascii_cell3(ecl_grid_type * grid , int i , int j , int k , FILE * stream , const double * offset); + /* lgr related functions */ const ecl_grid_type * ecl_grid_get_cell_lgr3(const ecl_grid_type * grid , int i, int j , int k); const ecl_grid_type * ecl_grid_get_cell_lgr1A(const ecl_grid_type * grid , int active_index); @@ -177,14 +183,32 @@ extern "C" { ecl_kw_type * ecl_grid_alloc_actnum_kw( const ecl_grid_type * grid ); ecl_kw_type * ecl_grid_alloc_hostnum_kw( const ecl_grid_type * grid ); ecl_kw_type * ecl_grid_alloc_gridhead_kw( int nx, int ny , int nz , int grid_nr); - + ecl_grid_type * ecl_grid_alloc_copy( const ecl_grid_type * src_grid ); + void ecl_grid_ri_export( const ecl_grid_type * ecl_grid , double * ri_points); void ecl_grid_cell_ri_export( const ecl_grid_type * ecl_grid , int global_index , double * ri_points); bool ecl_grid_dual_grid( const ecl_grid_type * ecl_grid ); int ecl_grid_get_num_nnc( const ecl_grid_type * grid ); + bool ecl_grid_cell_regular3( const ecl_grid_type * ecl_grid, int i,int j,int k); + bool ecl_grid_cell_regular1( const ecl_grid_type * ecl_grid, int global_index); + + void ecl_grid_init_zcorn_data( const ecl_grid_type * grid , float * zcorn ); + void ecl_grid_init_zcorn_data_double( const ecl_grid_type * grid , double * zcorn ); + int ecl_grid_get_zcorn_size( const ecl_grid_type * grid ); + + void ecl_grid_init_coord_data( const ecl_grid_type * grid , float * coord ); + void ecl_grid_init_coord_data_double( const ecl_grid_type * grid , double * coord ); + int ecl_grid_get_coord_size( const ecl_grid_type * ecl_grid); + + void ecl_grid_init_actnum_data( const ecl_grid_type * grid , int * actnum ); + bool ecl_grid_use_mapaxes( const ecl_grid_type * grid ); + void ecl_grid_init_mapaxes_data_double( const ecl_grid_type * grid , double * mapaxes); + void ecl_grid_reset_actnum( ecl_grid_type * grid , const int * actnum ); + UTIL_IS_INSTANCE_HEADER( ecl_grid ); + UTIL_SAFE_CAST_HEADER( ecl_grid ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw.h index bbca924598..d84f514653 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw.h @@ -26,6 +26,7 @@ extern "C" { #include #include +#include #include #include @@ -34,6 +35,8 @@ extern "C" { typedef struct ecl_kw_struct ecl_kw_type; + + #define ECL_KW_FORTIO_HEADER_SIZE 4 + ECL_STRING_LENGTH + 4 + ECL_TYPE_LENGTH + 4 size_t ecl_kw_fortio_size( const ecl_kw_type * ecl_kw ); void * ecl_kw_get_ptr(const ecl_kw_type *ecl_kw); @@ -59,6 +62,7 @@ extern "C" { void ecl_kw_fread(ecl_kw_type * , fortio_type * ); ecl_kw_type * ecl_kw_fread_alloc(fortio_type *); void ecl_kw_free_data(ecl_kw_type *); + void ecl_kw_fread_indexed_data(fortio_type * fortio, offset_type data_offset, ecl_type_enum ecl_type, int element_count, const int_vector_type* index_map, char* buffer); void ecl_kw_free(ecl_kw_type *); void ecl_kw_free__(void *); ecl_kw_type * ecl_kw_alloc_copy (const ecl_kw_type *); @@ -109,6 +113,7 @@ extern "C" { bool ecl_kw_is_grdecl_file(FILE * ); bool ecl_kw_is_kw_file(FILE * , bool ); + int ecl_kw_element_sum_int( const ecl_kw_type * ecl_kw ); double ecl_kw_element_sum_float( const ecl_kw_type * ecl_kw ); void ecl_kw_inplace_inv(ecl_kw_type * my_kw); void ecl_kw_element_sum(const ecl_kw_type * , void * ); diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_region.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_region.h index e6e00d9790..8c790909e9 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_region.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_region.h @@ -163,6 +163,7 @@ typedef struct ecl_region_struct ecl_region_type; void ecl_region_kw_imul( ecl_region_type * ecl_region , ecl_kw_type * ecl_kw , const ecl_kw_type * mul_kw , bool force_active); void ecl_region_kw_isub( ecl_region_type * ecl_region , ecl_kw_type * ecl_kw , const ecl_kw_type * delta_kw , bool force_active); + bool ecl_region_equal( const ecl_region_type * region1 , const ecl_region_type * region2); /*****************************************************************/ /* set/get the name */ diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_sum.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_sum.h index c5e5eccbea..41ada81092 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_sum.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_sum.h @@ -86,7 +86,6 @@ typedef struct ecl_sum_struct ecl_sum_type; void ecl_sum_summarize( const ecl_sum_type * ecl_sum , FILE * stream ); bool ecl_sum_general_is_total(const ecl_sum_type * ecl_sum , const char * gen_key); - bool ecl_sum_var_is_total(const ecl_sum_type * ecl_sum , const char * gen_key); void ecl_sum_free_data(ecl_sum_type * ); void ecl_sum_free__(void * ); void ecl_sum_free(ecl_sum_type * ); diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_util.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_util.h index 614ed07ca6..92c8454e4d 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_util.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_util.h @@ -141,6 +141,14 @@ typedef enum { #define ECL_PHASE_ENUM_SIZE 3 +typedef enum { + ECL_METRIC_UNITS = 0, + ECL_FIELD_UNITS = 1, + ECL_LAB_UNITS = 2 +} ecl_unit_enum; + +#define ECL_UNIT_ENUM_DEFS {.value = 0 , .name = "ECL_METRIC_UNITS"}, {.value = 1 , .name = "ECL_FIELD_UNITS"} , {.value = 2 , .name = "ECL_LAB_UNITS"} +#define ECL_UNIT_ENUM_SIZE 3 // For unformatted files: @@ -177,6 +185,7 @@ int ecl_util_get_month_nr(const char * month_name); int ecl_util_fname_report_cmp(const void *f1, const void *f2); time_t ecl_util_make_date(int mday , int month , int year); time_t ecl_util_make_date__(int mday , int month , int year, int * year_offset); +ecl_unit_enum ecl_util_get_unit_set(const char * data_file); bool ecl_util_valid_basename_fmt( const char * basename_fmt ); bool ecl_util_valid_basename( const char * basename ); diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block.h new file mode 100644 index 0000000000..c5f8a2ba05 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block.h @@ -0,0 +1,59 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'fault_block.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __FAULT_BLOCK_H__ +#define __FAULT_BLOCK_H__ +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include + +#include +#include + + + + + typedef struct fault_block_struct fault_block_type; + + void fault_block_free__( void * arg); + int fault_block_get_size( const fault_block_type * block ); + double fault_block_get_xc( fault_block_type * fault_block ); + double fault_block_get_yc( fault_block_type * fault_block ); + int fault_block_get_id( const fault_block_type * block ); + int fault_block_get_size( const fault_block_type * fault_block ); + void fault_block_export_cell(const fault_block_type * fault_block , int index , int * i , int * j , int * k , double * x, double * y, double * z); + void fault_block_assign_to_region( fault_block_type * fault_block , int region_id ); + const int_vector_type * fault_block_get_region_list( const fault_block_type * fault_block ); + int fault_block_iget_j(const fault_block_type * fault_block , int index); + int fault_block_iget_i(const fault_block_type * fault_block , int index); + void fault_block_add_cell( fault_block_type * fault_block , int i , int j); + bool fault_block_trace_edge( const fault_block_type * block , double_vector_type * x_list , double_vector_type * y_list, int_vector_type * cell_list); + const int_vector_type * fault_block_get_global_index_list( const fault_block_type * fault_block); + void fault_block_copy_content(fault_block_type * target_block , const fault_block_type * src_block ); + void fault_block_list_neighbours( const fault_block_type * block, int_vector_type * neighbour_list); + + UTIL_IS_INSTANCE_HEADER(fault_block); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block_layer.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block_layer.h new file mode 100644 index 0000000000..f3c918585e --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fault_block_layer.h @@ -0,0 +1,61 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'fault_block_layer.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __FAULT_BLOCK_LAYER_H__ +#define __FAULT_BLOCK_LAYER_H__ +#ifdef __cplusplus +extern "C" { +#endif + +#include + +#include +#include +#include +#include + + UTIL_IS_INSTANCE_HEADER(fault_block_layer); + + typedef struct fault_block_layer_struct fault_block_layer_type; + + fault_block_layer_type * fault_block_layer_alloc( const ecl_grid_type * grid , int k); + void fault_block_layer_free( fault_block_layer_type * layer ); + void fault_block_layer_free__( void * arg ); + bool fault_block_layer_has_block( const fault_block_layer_type * layer , int block_id); + void fault_block_layer_del_block( fault_block_layer_type * layer , int block_id); + fault_block_type * fault_block_layer_add_block( fault_block_layer_type * layer , int block_id); + fault_block_type * fault_block_layer_get_block( const fault_block_layer_type * layer , int block_id); + fault_block_type * fault_block_layer_iget_block( const fault_block_layer_type * layer , int storage_index); + fault_block_type * fault_block_layer_safe_get_block( fault_block_layer_type * layer , int block_id); + int fault_block_layer_get_max_id( const fault_block_layer_type * layer ); + int fault_block_layer_get_next_id( const fault_block_layer_type * layer ); + int fault_block_layer_get_size( const fault_block_layer_type * layer); + bool fault_block_layer_scan_kw( fault_block_layer_type * layer , const ecl_kw_type * fault_block_kw); + bool fault_block_layer_load_kw( fault_block_layer_type * layer , const ecl_kw_type * fault_block_kw); + int fault_block_layer_get_k( const fault_block_layer_type * layer ); + void fault_block_layer_scan_layer( fault_block_layer_type * fault_layer , layer_type * layer); + void fault_block_layer_insert_block_content( fault_block_layer_type * layer , const fault_block_type * src_block); + bool fault_block_layer_export( const fault_block_layer_type * layer , ecl_kw_type * faultblock_kw); + const ecl_grid_type * fault_block_layer_get_grid( const fault_block_layer_type * layer ); + layer_type * fault_block_layer_get_layer( const fault_block_layer_type * layer ); + + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/fortio.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fortio.h index 99e0b68b7f..cecd64cc79 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/fortio.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/fortio.h @@ -27,6 +27,7 @@ extern "C" { #include #include +#include typedef enum { FORTIO_NOENTRY = 0, /* File does not exists at all - application error. */ @@ -68,8 +69,10 @@ typedef struct fortio_struct fortio_type; void fortio_rewind(const fortio_type *fortio); const char * fortio_filename_ref(const fortio_type * ); bool fortio_fmt_file(const fortio_type *); - offset_type fortio_ftell( const fortio_type * fortio ); + offset_type fortio_ftell( const fortio_type * fortio ); int fortio_fseek( fortio_type * fortio , offset_type offset , int whence); + void fortio_data_fskip(fortio_type* fortio, const int element_size, const int element_count, const int block_count); + void fortio_data_fseek(fortio_type* fortio, offset_type data_offset, size_t data_element, const int element_size, const int element_count, const int block_size); int fortio_fileno( fortio_type * fortio ); bool fortio_fclose_stream( fortio_type * fortio ); @@ -77,6 +80,10 @@ typedef struct fortio_struct fortio_type; bool fortio_stream_is_open( const fortio_type * fortio ); bool fortio_assert_stream_open( fortio_type * fortio ); + +UTIL_IS_INSTANCE_HEADER( fortio ); +UTIL_SAFE_CAST_HEADER( fortio ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/layer.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/layer.h new file mode 100644 index 0000000000..4aaad8260a --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/layer.h @@ -0,0 +1,78 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'layer.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __LAYER_H__ +#define __LAYER_H__ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include + + +/* + The elements in this enum are (ab)used as indexes into a int[] vector; + i.e. the must span the values 0..3. +*/ + + typedef enum { + RIGHT_EDGE = 0, + LEFT_EDGE = 1, + TOP_EDGE = 2, + BOTTOM_EDGE = 3 + } edge_dir_enum; + + typedef struct { + int i; + int j; + } int_point2d_type; + + + + typedef struct layer_struct layer_type; + + int layer_get_nx( const layer_type * layer ); + int layer_get_ny( const layer_type * layer ); + void layer_fprintf_cell( const layer_type * layer , int i , int j , FILE * stream); + void layer_fprintf( const layer_type * layer , FILE * stream); + void layer_fprintf_box( const layer_type * layer , FILE * stream , int i1 , int i2 , int j1 , int j2); + layer_type * layer_alloc(int nx , int ny); + void layer_free( layer_type * layer ); + int layer_replace_cell_values( layer_type * layer , int old_value , int new_value); + int layer_iget_cell_value( const layer_type * layer, int i , int j); + void layer_iset_cell_value( layer_type * layer , int i , int j , int value); + int layer_iget_edge_value( const layer_type * layer , int i , int j , edge_dir_enum dir); + bool layer_cell_on_edge( const layer_type * layer , int i , int j); + int layer_get_ny( const layer_type * layer); + int layer_get_nx( const layer_type * layer); + int layer_get_cell_sum( const layer_type * layer ); + bool layer_trace_block_content( layer_type * layer , bool erase , int start_i , int start_j , int value , int_vector_type * i_list , int_vector_type * j_list); + bool layer_trace_block_edge( const layer_type * layer , int i , int j , int value , struct_vector_type * corner_list , int_vector_type * cell_list); + + +UTIL_IS_INSTANCE_HEADER( layer ); +UTIL_SAFE_CAST_HEADER( layer ); + + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_info.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_info.h index 596a5e99ad..f6dea17e8b 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_info.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_info.h @@ -50,6 +50,9 @@ extern "C" { int nnc_info_get_total_size( const nnc_info_type * nnc_info ); void nnc_info_fprintf(const nnc_info_type * nnc_info , FILE * stream); + bool nnc_info_equal( const nnc_info_type * nnc_info1 , const nnc_info_type * nnc_info2 ); + nnc_info_type * nnc_info_alloc_copy( const nnc_info_type * src_info ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_vector.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_vector.h index 20725738ac..c97a3166b2 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_vector.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/nnc_vector.h @@ -31,6 +31,7 @@ extern "C" { UTIL_IS_INSTANCE_HEADER(nnc_vector); nnc_vector_type * nnc_vector_alloc(int lgr_nr); + nnc_vector_type * nnc_vector_alloc_copy(const nnc_vector_type * src_vector); void nnc_vector_free( nnc_vector_type * nnc_vector ); void nnc_vector_add_nnc(nnc_vector_type * nnc_vector, int global_cell_number, int nnc_index); const int_vector_type * nnc_vector_get_grid_index_list(const nnc_vector_type * nnc_vector); @@ -38,7 +39,8 @@ extern "C" { int nnc_vector_get_lgr_nr(const nnc_vector_type * nnc_vector ); void nnc_vector_free__(void * arg); int nnc_vector_get_size( const nnc_vector_type * nnc_vector ); - + bool nnc_vector_equal( const nnc_vector_type * nnc_vector1 , const nnc_vector_type * nnc_vector2); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/point.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/point.h index 48205cdb6d..0b88d3d54a 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/point.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/point.h @@ -39,9 +39,10 @@ extern "C" { void point_inplace_sub(point_type * point , const point_type * sub); void point_inplace_add(point_type * point , const point_type * add); void point_inplace_scale(point_type * point , double scale_factor); + bool point_equal( const point_type *p1 , const point_type * p2); void point_compare( const point_type *p1 , const point_type * p2, bool * equal); void point_dump( const point_type * p , FILE * stream); - void point_dump_ascii( const point_type * p , FILE * stream); + void point_dump_ascii( const point_type * p , FILE * stream , const double * offset); void point_fprintf( const point_type * p , FILE * stream ); void point_free( point_type * p); void point_set( point_type *p , double x , double y , double z); @@ -53,6 +54,7 @@ extern "C" { double point_dot_product( const point_type * v1 , const point_type * v2); void point_normal_vector(point_type * n, const point_type * p0, const point_type * p1 , const point_type * p2); double point_plane_distance(const point_type * p , const point_type * n , const point_type * plane_point); + double point3_plane_distance(const point_type * p0 , const point_type * p1 , const point_type * p2 , const point_type * x); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/tetrahedron.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/tetrahedron.h index 2158a0d0a4..21f9602048 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/tetrahedron.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/tetrahedron.h @@ -34,6 +34,7 @@ struct tetrahedron_struct { void tetrahedron_init( tetrahedron_type * tet , const point_type * p0 , const point_type * p1 , const point_type * p2 , const point_type * p3); double tetrahedron_volume( const tetrahedron_type * tet ); bool tetrahedron_contains( const tetrahedron_type * tet , const point_type * p); +void tetrahedron_fprintf( const tetrahedron_type * tet , FILE * stream , const double * offset); #endif diff --git a/ThirdParty/Ert/devel/libecl/src/CMakeLists.txt b/ThirdParty/Ert/devel/libecl/src/CMakeLists.txt index 3024be7664..d3d79e2c17 100644 --- a/ThirdParty/Ert/devel/libecl/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libecl/src/CMakeLists.txt @@ -2,9 +2,84 @@ include_directories( ext ) file(GLOB ext_source "ext/*.c" ) file(GLOB ext_header "ext/*.h" ) -set( source_files ecl_rsthead.c ecl_sum_tstep.c ecl_rst_file.c ecl_init_file.c ecl_grid_cache.c smspec_node.c ecl_kw_grdecl.c ecl_file_kw.c ecl_grav.c ecl_grav_calc.c ecl_smspec.c ecl_sum_data.c ecl_util.c ecl_kw.c ecl_sum.c fortio.c ecl_rft_file.c ecl_rft_node.c ecl_rft_cell.c ecl_grid.c ecl_coarse_cell.c ecl_box.c ecl_io_config.c ecl_file.c ecl_region.c point.c tetrahedron.c ecl_subsidence.c ecl_grid_dims.c grid_dims.c nnc_info.c ecl_grav_common.c nnc_vector.c ecl_nnc_export.c${ext_source}) +set( source_files + ecl_rsthead.c + ecl_sum_tstep.c + ecl_rst_file.c + ecl_init_file.c + ecl_grid_cache.c + smspec_node.c + ecl_kw_grdecl.c + ecl_file_kw.c + ecl_grav.c + ecl_grav_calc.c + ecl_smspec.c + ecl_sum_data.c + ecl_util.c + ecl_kw.c + ecl_sum.c + fortio.c + ecl_rft_file.c + ecl_rft_node.c + ecl_rft_cell.c + ecl_grid.c + ecl_coarse_cell.c + ecl_box.c + ecl_io_config.c + ecl_file.c + ecl_region.c + point.c + tetrahedron.c + ecl_subsidence.c + ecl_grid_dims.c + grid_dims.c + nnc_info.c + ecl_grav_common.c + nnc_vector.c + ecl_nnc_export.c + layer.c + fault_block_layer.c + ${ext_source}) -set( header_files ecl_rsthead.h ecl_sum_tstep.h ecl_rst_file.h ecl_init_file.h smspec_node.h ecl_grid_cache.h ecl_kw_grdecl.h ecl_file_kw.h ecl_grav.h ecl_grav_calc.h ecl_endian_flip.h ecl_smspec.h ecl_sum_data.h ecl_util.h ecl_kw.h ecl_sum.h fortio.h ecl_rft_file.h ecl_rft_node.h ecl_rft_cell.h ecl_box.h ecl_coarse_cell.h ecl_grid.h ecl_io_config.h ecl_file.h ecl_region.h ecl_kw_magic.h ecl_subsidence.h ecl_grid_dims.h grid_dims.h nnc_info.h nnc_vector.h ${ext_header} ecl_grav_common.h ecl_nnc_export.h) +set( header_files + ecl_rsthead.h + ecl_sum_tstep.h + ecl_rst_file.h + ecl_init_file.h + smspec_node.h + ecl_grid_cache.h + ecl_kw_grdecl.h + ecl_file_kw.h + ecl_grav.h + ecl_grav_calc.h + ecl_endian_flip.h + ecl_smspec.h + ecl_sum_data.h + ecl_util.h + ecl_kw.h + ecl_sum.h + fortio.h + ecl_rft_file.h + ecl_rft_node.h + ecl_rft_cell.h + ecl_box.h + ecl_coarse_cell.h + ecl_grid.h + ecl_io_config.h + ecl_file.h + ecl_region.h + ecl_kw_magic.h + ecl_subsidence.h + ecl_grid_dims.h + grid_dims.h + nnc_info.h + nnc_vector.h + ecl_grav_common.h + ecl_nnc_export.h + layer.h + fault_block.h + fault_block_layer.h + ${ext_header}) if (ERT_USE_OPENMP) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}") diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c b/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c index b0935edcf5..97a59fa7a6 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c @@ -119,6 +119,8 @@ struct ecl_coarse_cell_struct { }; + + static UTIL_SAFE_CAST_FUNCTION( ecl_coarse_cell , ECL_COARSE_CELL_TYPE_ID ) void ecl_coarse_cell_assert( ecl_coarse_cell_type * coarse_cell ) { @@ -157,6 +159,37 @@ ecl_coarse_cell_type * ecl_coarse_cell_alloc() { } +bool ecl_coarse_cell_equal( const ecl_coarse_cell_type * coarse_cell1 , const ecl_coarse_cell_type * coarse_cell2) { + bool equal = true; + if (coarse_cell1->active_index != coarse_cell2->active_index) + equal = false; + + if (coarse_cell1->active_fracture_index != coarse_cell2->active_fracture_index) + equal = false; + + if (equal) { + if (memcmp( coarse_cell1->ijk , coarse_cell2->ijk , 6 * sizeof * coarse_cell1->ijk) != 0) + equal = false; + } + + + if (equal) + equal = int_vector_equal(coarse_cell1->active_cells , coarse_cell2->active_cells); + + if (equal) + equal = int_vector_equal(coarse_cell1->active_values , coarse_cell2->active_values); + + if (equal) + equal = int_vector_equal(coarse_cell1->cell_list , coarse_cell2->cell_list); + + if (!equal) { + ecl_coarse_cell_fprintf( coarse_cell1 , stdout ); + ecl_coarse_cell_fprintf( coarse_cell2 , stdout ); + } + + return equal; +} + /* Should not be called more than once with the same arguments; that is not checked. @@ -306,12 +339,12 @@ int ecl_coarse_cell_get_num_active( const ecl_coarse_cell_type * coarse_cell) { /*****************************************************************/ -void ecl_coarse_cell_fprintf( ecl_coarse_cell_type * coarse_cell , FILE * stream ) { +void ecl_coarse_cell_fprintf( const ecl_coarse_cell_type * coarse_cell , FILE * stream ) { fprintf(stream,"Coarse box: \n"); fprintf(stream," i : %3d - %3d\n",coarse_cell->ijk[0] , coarse_cell->ijk[1]); fprintf(stream," j : %3d - %3d\n",coarse_cell->ijk[2] , coarse_cell->ijk[3]); fprintf(stream," k : %3d - %3d\n",coarse_cell->ijk[4] , coarse_cell->ijk[5]); fprintf(stream," active_cells : " ); int_vector_fprintf( coarse_cell->active_cells , stream , "" , "%5d "); fprintf(stream," active_values : " ); int_vector_fprintf( coarse_cell->active_values , stream , "" , "%5d "); - fprintf(stream," Cells : " ); int_vector_fprintf( coarse_cell->cell_list , stream , "" , "%5d "); + //fprintf(stream," Cells : " ); int_vector_fprintf( coarse_cell->cell_list , stream , "" , "%5d "); } diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_file.c b/ThirdParty/Ert/devel/libecl/src/ecl_file.c index 9c60277efc..092bb68b3f 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_file.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_file.c @@ -132,7 +132,7 @@ struct file_map_struct { fortio_type * fortio; /* The same fortio instance pointer as in the ecl_file styructure. */ bool owner; /* Is this map the owner of the ecl_file_kw instances; only true for the global_map. */ inv_map_type * inv_map; /* Shared reference owned by the ecl_file structure. */ - int flags; + int * flags; }; @@ -191,7 +191,7 @@ static bool FILE_FLAGS_SET( int state_flags , int query_flags) { -static file_map_type * file_map_alloc( fortio_type * fortio , int flags , inv_map_type * inv_map , bool owner ) { +static file_map_type * file_map_alloc( fortio_type * fortio , int * flags , inv_map_type * inv_map , bool owner ) { file_map_type * file_map = util_malloc( sizeof * file_map ); file_map->kw_list = vector_alloc_new(); file_map->kw_index = hash_alloc(); @@ -199,7 +199,7 @@ static file_map_type * file_map_alloc( fortio_type * fortio , int flags , inv_ma file_map->owner = owner; file_map->fortio = fortio; file_map->inv_map = inv_map; - file_map->flags = flags; + file_map->flags = flags; return file_map; } @@ -268,13 +268,25 @@ static ecl_kw_type * file_map_iget_kw( const file_map_type * file_map , int inde ecl_kw = ecl_file_kw_get_kw( file_kw , file_map->fortio , file_map->inv_map); - if (FILE_FLAGS_SET( file_map->flags , ECL_FILE_CLOSE_STREAM)) + if (FILE_FLAGS_SET( file_map->flags[0] , ECL_FILE_CLOSE_STREAM)) fortio_fclose_stream( file_map->fortio ); } } return ecl_kw; } +static void file_map_index_fload_kw(const file_map_type * file_map, const char* kw, int index, const int_vector_type * index_map, char* buffer) { + ecl_file_kw_type * file_kw = file_map_iget_named_file_kw( file_map , kw , index); + + if (fortio_assert_stream_open( file_map->fortio )) { + offset_type offset = ecl_file_kw_get_offset(file_kw); + ecl_type_enum ecl_type = ecl_file_kw_get_type(file_kw); + int element_count = ecl_file_kw_get_size(file_kw); + + ecl_kw_fread_indexed_data(file_map->fortio, offset + ECL_KW_FORTIO_HEADER_SIZE, ecl_type, element_count, index_map, buffer); + } +} + static int file_map_find_kw_value( const file_map_type * file_map , const char * kw , const void * value) { int global_index = -1; @@ -330,7 +342,7 @@ static ecl_kw_type * file_map_iget_named_kw( const file_map_type * file_map , co ecl_kw = ecl_file_kw_get_kw( file_kw , file_map->fortio , file_map->inv_map); - if (FILE_FLAGS_SET( file_map->flags , ECL_FILE_CLOSE_STREAM)) + if (FILE_FLAGS_SET( file_map->flags[0] , ECL_FILE_CLOSE_STREAM)) fortio_fclose_stream( file_map->fortio ); } } @@ -384,7 +396,7 @@ static bool file_map_load_all( file_map_type * file_map ) { loadOK = true; } - if (FILE_FLAGS_SET( file_map->flags , ECL_FILE_CLOSE_STREAM)) + if (FILE_FLAGS_SET( file_map->flags[0] , ECL_FILE_CLOSE_STREAM)) fortio_fclose_stream( file_map->fortio ); return loadOK; @@ -776,6 +788,10 @@ ecl_kw_type * ecl_file_iget_named_kw( const ecl_file_type * file , const char * return file_map_iget_named_kw( file->active_map , kw , ith); } +void ecl_file_indexed_read(const ecl_file_type * file , const char * kw, int index, const int_vector_type * index_map, char* buffer) { + file_map_index_fload_kw(file->active_map, kw, index, index_map, buffer); +} + ecl_type_enum ecl_file_iget_named_type( const ecl_file_type * file , const char * kw , int ith) { return file_map_iget_named_type( file->active_map , kw , ith ); } @@ -871,7 +887,7 @@ static ecl_file_type * ecl_file_open__( const char * filename , int flags) { if (fortio) { ecl_file_type * ecl_file = ecl_file_alloc_empty( flags ); ecl_file->fortio = fortio; - ecl_file->global_map = file_map_alloc( ecl_file->fortio , ecl_file->flags , ecl_file->inv_map , true ); + ecl_file->global_map = file_map_alloc( ecl_file->fortio , &ecl_file->flags , ecl_file->inv_map , true ); ecl_file_add_map( ecl_file , ecl_file->global_map ); ecl_file_scan( ecl_file ); @@ -907,6 +923,9 @@ int ecl_file_get_flags( const ecl_file_type * ecl_file ) { return ecl_file->flags; } +void ecl_file_set_flags( ecl_file_type * ecl_file, int flags ) { + ecl_file->flags = flags; +} bool ecl_file_flags_set( const ecl_file_type * ecl_file , int flags) { return FILE_FLAGS_SET( ecl_file->flags , flags ); @@ -963,6 +982,13 @@ void ecl_file_close(ecl_file_type * ecl_file) { } +void ecl_file_close_fortio_stream(ecl_file_type * ecl_file) { + if (ecl_file->fortio != NULL) { + fortio_fclose_stream(ecl_file->fortio); + } +} + + /** This function will detach the current ecl_file instance from the underlying fortio instance. The ecl_file instance can be used diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_file_kw.c b/ThirdParty/Ert/devel/libecl/src/ecl_file_kw.c index 3790afc6f8..1dcd0dcf79 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_file_kw.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_file_kw.c @@ -293,6 +293,9 @@ ecl_type_enum ecl_file_kw_get_type( const ecl_file_kw_type * file_kw) { return file_kw->ecl_type; } +offset_type ecl_file_kw_get_offset(const ecl_file_kw_type * file_kw) { + return file_kw->file_offset; +} void ecl_file_kw_fskip_data( const ecl_file_kw_type * file_kw , fortio_type * fortio) { ecl_kw_fskip_data__( file_kw->ecl_type , file_kw->kw_size , fortio ); diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_grid.c b/ThirdParty/Ert/devel/libecl/src/ecl_grid.c index f21c47a1cb..938ee0d588 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_grid.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_grid.c @@ -1,3 +1,5 @@ +// Fauilure Troll/MSW_LGR/2BRANCHES-CCEWELLPATH-NEW-SCH-TUNED-A3.EGRID + /* Copyright (c) 2011 statoil asa, norway. @@ -29,6 +31,8 @@ #include #include +#include + #include #include #include @@ -456,30 +460,80 @@ klib/ */ -static const int tetrahedron_permutations[2][12][3] = {{{0 , 2 , 6}, - {0 , 4 , 6}, - {0 , 4 , 5}, - {0 , 1 , 5}, - {1 , 3 , 7}, - {1 , 5 , 7}, - {2 , 3 , 7}, - {2 , 6 , 7}, - {0 , 1 , 2}, - {1 , 2 , 3}, - {4 , 5 , 6}, - {5 , 6 , 7}}, - {{0 , 2 , 4}, - {2 , 4 , 6}, - {0 , 4 , 1}, - {4 , 5 , 1}, - {1 , 3 , 5}, - {3 , 5 , 7}, - {2 , 3 , 6}, - {3 , 6 , 7}, - {0 , 1 , 3}, - {0 , 2 , 3}, - {4 , 5 , 7}, - {4 , 6 , 7}}}; + +/* +About ordering of the corners in the cell +----------------------------------------- + +This code reads and builds the grid structure from the ECLIPSE +GRID/EGRID files without really considering the question about where +the cells are located in "the real world", the format is quite general +and it should(?) be possible to formulate different conventions +(i.e. handedness and direction of z-axis) with the same format. + +The corners in a cell are numbered 0 - 7, where corners 0-3 constitute +one layer and the corners 4-7 consitute the other layer. Observe the +numbering does not follow a consistent rotation around the face: + + + j + 6---7 /|\ + | | | + 4---5 | + | + o----------> i + 2---3 + | | + 0---1 + +Many grids are left-handed, i.e. the direction of increasing z will +point down towards the center of the earth. Hence in the figure above +the layer 4-7 will be deeper down in the reservoir than layer 0-3, and +also have higher z-value. + +Warning: The main author of this code suspects that the coordinate +system can be right-handed as well, giving a z axis which will +increase 'towards the sky'; the safest is probaly to check this +explicitly if it matters for the case at hand. +*/ + +static const int tetrahedron_permutations[2][12][3] = {{{0,1,2}, + {3,2,1}, + {0,4,1}, + {5,1,4}, + {0,2,4}, + {6,4,2}, + {3,7,2}, + {6,2,7}, + {3,1,7}, + {5,7,1}, + {5,4,7}, + {6,7,4}}, + {{1,5,3}, + {1,3,0}, + {1,0,5}, + {2,0,3}, + {2,6,0}, + {2,3,6}, + {4,5,0}, + {4,6,5}, + {4,0,6}, + {7,5,6}, + {7,3,5}, + {7,6,3}}}; + + + + + + + +static const int bounding_planes[6][3] = {{0,1,2}, + {0,2,4}, + {0,4,1}, + {4,6,5}, + {2,3,6}, + {1,5,3}}; @@ -529,7 +583,6 @@ struct ecl_cell_struct { -#define LARGE_CELL_MALLOC 1 #define ECL_GRID_ID 991010 struct ecl_grid_struct { @@ -548,11 +601,7 @@ struct ecl_grid_struct { int * fracture_index_map; /* For fractures: this a list of nx*ny*nz elements, where value -1 means inactive cell .*/ int * inv_fracture_index_map; /* For fractures: this is list of total_active elements - which point back to the index_map. */ -#ifdef LARGE_CELL_MALLOC ecl_cell_type * cells; -#else - ecl_cell_type ** cells; -#endif char * parent_name; /* the name of the parent for a nested lgr - for the main grid, and also a lgr descending directly from the main grid this will be NULL. */ @@ -595,7 +644,7 @@ struct ecl_grid_struct { -static void ecl_cell_compare(const ecl_cell_type * c1 , ecl_cell_type * c2, bool * equal) { +static void ecl_cell_compare(const ecl_cell_type * c1 , const ecl_cell_type * c2, bool include_nnc , bool * equal) { int i; if (c1->active != c2->active) @@ -613,12 +662,18 @@ static void ecl_cell_compare(const ecl_cell_type * c1 , ecl_cell_type * c2, bool if (c1->host_cell != c2->host_cell) *equal = false; - + if (*equal) { for (i=0; i < 8; i++) point_compare( &c1->corner_list[i] , &c2->corner_list[i] , equal ); } + + if (include_nnc) { + if (*equal) + *equal = nnc_info_equal( c1->nnc_info , c2->nnc_info ); + } + } @@ -629,13 +684,21 @@ static void ecl_cell_dump( const ecl_cell_type * cell , FILE * stream) { } -static void ecl_cell_dump_ascii( const ecl_cell_type * cell , int i , int j , int k , FILE * stream) { - fprintf(stream , "Cell: i:%3d j:%3d k:%3d CoarseGroup:%4d active_nr:%6d\nCorners:\n",i,j,k,cell->coarse_group , cell->active_index[MATRIX_INDEX]); +static void ecl_cell_assert_center( ecl_cell_type * cell); + +static void ecl_cell_dump_ascii( ecl_cell_type * cell , int i , int j , int k , FILE * stream , const double * offset) { + fprintf(stream , "Cell: i:%3d j:%3d k:%3d host_cell:%d CoarseGroup:%4d active_nr:%6d active:%d \nCorners:\n",i,j,k,cell->host_cell, cell->coarse_group , cell->active_index[MATRIX_INDEX], cell->active); + + ecl_cell_assert_center( cell ); + fprintf(stream , "Center : "); + point_dump_ascii( &cell->center , stream , offset); + fprintf(stream , "\n"); + { int l; for (l=0; l < 8; l++) { fprintf(stream , "Corner %d : ",l); - point_dump_ascii( &cell->corner_list[l] , stream ); + point_dump_ascii( &cell->corner_list[l] , stream , offset); fprintf(stream , "\n"); } } @@ -883,7 +946,6 @@ static void ecl_cell_init( ecl_cell_type * cell , bool init_valid) { cell->cell_flags = 0; cell->active_index[MATRIX_INDEX] = -1; cell->active_index[FRACTURE_INDEX] = -1; - if (init_valid) cell->cell_flags = CELL_FLAG_VALID; @@ -891,6 +953,14 @@ static void ecl_cell_init( ecl_cell_type * cell , bool init_valid) { } +/* +#define mod(x,n) ((x) % (n)) +static int ecl_cell_get_tetrahedron_method( int i , int j , int k) { + return (1 + (1 - 2*mod(i,2)) * (1 - 2 * mod(j,2)) * (1 - 2*mod(k,2))) / 2; +} +#undef mod +*/ + static void ecl_cell_set_center( ecl_cell_type * cell) { point_set(&cell->center , 0 , 0 , 0); { @@ -899,6 +969,7 @@ static void ecl_cell_set_center( ecl_cell_type * cell) { point_inplace_add(&cell->center , &cell->corner_list[c]); } point_inplace_scale(&cell->center , 1.0 / 8.0); + SET_CELL_FLAG( cell , CELL_FLAG_CENTER ); } @@ -961,7 +1032,7 @@ static double C(double *r,int f1,int f2,int f3){ } -static double ecl_cell_get_volume( ecl_cell_type * cell ) { +static double ecl_cell_get_volume_tskille( ecl_cell_type * cell ) { double volume = 0; int pb,pg,qa,qg,ra,rb; double X[8]; @@ -997,14 +1068,14 @@ static double ecl_cell_get_volume( ecl_cell_type * cell ) { } - -static double ecl_cell_get_volume_wrong( ecl_cell_type * cell ) { - ecl_cell_assert_center( cell ); +static double ecl_cell_get_signed_volume( ecl_cell_type * cell) { + ecl_cell_assert_center( cell); { tetrahedron_type tet; int itet; double volume = 0; for (itet = 0; itet < 12; itet++) { + /* using both tetrahedron decompositions - gives good agreement with porv from eclipse init files. @@ -1021,6 +1092,11 @@ static double ecl_cell_get_volume_wrong( ecl_cell_type * cell ) { } +static double ecl_cell_get_volume( ecl_cell_type * cell ) { + return fabs( ecl_cell_get_signed_volume(cell)); +} + + static double triangle_area(double x1 , double y1 , double x2 , double y2 , double x3 ,double y3) { @@ -1097,82 +1173,8 @@ static bool ecl_cell_layer_contains_xy( const ecl_cell_type * cell , bool lower_ } } -/* -deeper layer: (larger (negative) z values). ------------- - - 6---7 - | | - 4---5 - - - 2---3 - | | - 0---1 - - -*/ - - - - -static bool ecl_cell_contains_point( ecl_cell_type * cell , const point_type * p) { - /* - 1. first check if the point z value is below the deepest point of - the cell, or above the shallowest => return false. - - 2. should do similar fast checks in x/y direction. - - 3. full geometric verification. - */ - - if (GET_CELL_FLAG(cell , CELL_FLAG_TAINTED)) - return false; - - if (p->z < ecl_cell_min_z( cell )) - return false; - - if (p->z > ecl_cell_max_z( cell )) - return false; - - if (p->x < ecl_cell_min_x( cell )) - return false; - - if (p->x > ecl_cell_max_x( cell )) - return false; - - if (p->y < ecl_cell_min_y( cell )) - return false; - - if (p->y > ecl_cell_max_y( cell )) - return false; - - - - { - const int method = 0; - int tetrahedron_nr = 0; - tetrahedron_type tet; - - if (ecl_cell_get_volume( cell ) > 0) { - /* does never exit from this loop - only returns from the whole function. */ - while (true) { - ecl_cell_init_tetrahedron( cell , &tet , method , tetrahedron_nr ); - if (tetrahedron_contains( &tet , p )) - return true; - - tetrahedron_nr++; - if (tetrahedron_nr == 12) - return false; /* ok - cell did not contain point. */ - } - } - } - util_abort("%s: internal error - should not be here \n",__func__); - return false; -} - - + /** lower layer: upper layer @@ -1220,11 +1222,7 @@ UTIL_IS_INSTANCE_FUNCTION( ecl_grid , ECL_GRID_ID); static ecl_cell_type * ecl_grid_get_cell(const ecl_grid_type * grid , int global_index) { -#ifdef LARGE_CELL_MALLOC return &grid->cells[global_index]; -#else - return grid->cells[global_index]; -#endif } @@ -1252,25 +1250,11 @@ static void ecl_grid_free_cells( ecl_grid_type * grid ) { nnc_info_free(cell->nnc_info); } -#ifndef LARGE_CELL_MALLOC - int i; - for (i=0; i < grid->size; i++) { - ecl_cell_type * cell = ecl_grid_get_cell( grid , i ); - ecl_cell_free( cell ); - } -#endif free( grid->cells ); } static void ecl_grid_alloc_cells( ecl_grid_type * grid , bool init_valid) { grid->cells = util_calloc(grid->size , sizeof * grid->cells ); -#ifndef LARGE_CELL_MALLOC - { - int i; - for (i=0; i < grid->size; i++) - grid->cells[i] = ecl_cell_alloc(); - } -#endif { ecl_cell_type * cell0 = ecl_grid_get_cell( grid , 0 ); ecl_cell_init( cell0 , init_valid ); @@ -1411,7 +1395,7 @@ static void ecl_grid_set_cell_GRID(ecl_grid_type * ecl_grid , int coords_size , int active_value = ACTIVE_MATRIX; /* - This is the rather hysterical treatment of dual porosity in qGRID + This is the rather hysterical treatment of dual porosity in GRID files. Cells with k >= nz consitute the fracture part of the grid. For these cell the cell properties are not recalculated, but the active flag is updated to include the active|inactive @@ -1462,13 +1446,13 @@ static void ecl_grid_set_cell_GRID(ecl_grid_type * ecl_grid , int coords_size , util_abort("%s: Need 7 element coords keywords for LGR - or reimplement to use LGRILG keyword.\n",__func__); switch(coords_size) { - case(4): /* all cells active */ + case 4: /* all cells active */ cell->active += active_value; break; - case(5): /* only spesific cells active - no lgr */ + case 5: /* only spesific cells active - no lgr */ cell->active += coords[4] * active_value; break; - case(7): + case 7: cell->active += coords[4] * active_value; cell->host_cell = coords[5] - 1; cell->coarse_group = coords[6] - 1; @@ -1482,8 +1466,10 @@ static void ecl_grid_set_cell_GRID(ecl_grid_type * ecl_grid , int coords_size , if (matrix_cell) { for (c = 0; c < 8; c++) { point_set(&cell->corner_list[c] , corners[3*c] , corners[3*c + 1] , corners[3*c + 2]); + if (ecl_grid->use_mapaxes) point_mapaxes_transform( &cell->corner_list[c] , ecl_grid->origo , ecl_grid->unit_x , ecl_grid->unit_y ); + } } } @@ -1849,6 +1835,8 @@ static void ecl_grid_install_lgr_common(ecl_grid_type * host_grid , ecl_grid_typ owned by the main grid. */ + + static void ecl_grid_install_lgr_EGRID(ecl_grid_type * host_grid , ecl_grid_type * lgr_grid , const int * hostnum) { int global_lgr_index; @@ -2039,6 +2027,82 @@ static ecl_grid_type * ecl_grid_alloc_GRDECL_data__(ecl_grid_type * global_grid return ecl_grid; } + +static void ecl_grid_copy_mapaxes( ecl_grid_type * target_grid , const ecl_grid_type * src_grid ) { + int i; + target_grid->use_mapaxes = src_grid->use_mapaxes; + for (i=0; i < 6; i++) + target_grid->mapaxes[i] = src_grid->mapaxes[i]; +} + + +static void ecl_grid_copy_content( ecl_grid_type * target_grid , const ecl_grid_type * src_grid ) { + int global_index; + for (global_index = 0; global_index < src_grid->size; global_index++) { + ecl_cell_type * target_cell = ecl_grid_get_cell( target_grid , global_index); + const ecl_cell_type * src_cell = ecl_grid_get_cell( src_grid , global_index ); + + ecl_cell_memcpy( target_cell , src_cell ); + if (src_cell->nnc_info) + target_cell->nnc_info = nnc_info_alloc_copy( src_cell->nnc_info ); + } + ecl_grid_copy_mapaxes( target_grid , src_grid ); + + target_grid->parent_name = util_alloc_string_copy( src_grid->parent_name ); + target_grid->name = util_alloc_string_copy( src_grid->name ); + + target_grid->coarsening_active = src_grid->coarsening_active; + ecl_grid_init_coarse_cells( target_grid ); +} + +static ecl_grid_type * ecl_grid_alloc_copy__( const ecl_grid_type * src_grid, ecl_grid_type * main_grid ) { + ecl_grid_type * copy_grid = ecl_grid_alloc_empty( main_grid , src_grid->dualp_flag , ecl_grid_get_nx( src_grid ) , ecl_grid_get_ny( src_grid ) , ecl_grid_get_nz( src_grid ) , 0 , false ); + + ecl_grid_copy_content( copy_grid , src_grid ); // This will handle everything except LGR relationships which is established in the calling routine + ecl_grid_update_index( copy_grid ); + + return copy_grid; +} + + + + +ecl_grid_type * ecl_grid_alloc_copy( const ecl_grid_type * src_grid ) { + ecl_grid_type * copy_grid = ecl_grid_alloc_copy__( src_grid , NULL ); + + { + int grid_nr; + for (grid_nr = 0; grid_nr < vector_get_size( src_grid->LGR_list ); grid_nr++) { + const ecl_grid_type * src_lgr = vector_iget_const( src_grid->LGR_list , grid_nr); + ecl_grid_type * copy_lgr = ecl_grid_alloc_copy__( src_lgr , copy_grid ); + ecl_grid_type * host_grid; + + ecl_grid_add_lgr( copy_grid , copy_lgr ); // This handles the storage ownership of the LGR. + if (copy_lgr->parent_name == NULL) + host_grid = copy_grid; + else + host_grid = ecl_grid_get_lgr( copy_grid , copy_lgr->parent_name ); + + { + int global_lgr_index; + + for (global_lgr_index = 0; global_lgr_index < copy_lgr->size; global_lgr_index++) { + ecl_cell_type * lgr_cell = ecl_grid_get_cell( copy_lgr , global_lgr_index); + ecl_cell_type * host_cell = ecl_grid_get_cell( host_grid , lgr_cell->host_cell ); + + ecl_cell_install_lgr( host_cell , copy_lgr ); + } + ecl_grid_install_lgr_common( host_grid , copy_lgr ); + + } + + } + } + + return copy_grid; +} + + /* If you create/load data for the various fields, this function can be used to create a GRID instance, without going through a GRID/EGRID @@ -2050,6 +2114,24 @@ ecl_grid_type * ecl_grid_alloc_GRDECL_data(int nx , int ny , int nz , const floa return ecl_grid_alloc_GRDECL_data__(NULL , FILEHEAD_SINGLE_POROSITY , nx , ny , nz , zcorn , coord , actnum , mapaxes , NULL , 0); } + +const float * ecl_grid_get_mapaxes_from_kw__(const ecl_kw_type * mapaxes_kw) { + const float * mapaxes_data = ecl_kw_get_float_ptr(mapaxes_kw); + + float x1 = mapaxes_data[2]; + float y1 = mapaxes_data[3]; + float x2 = mapaxes_data[4]; + float y2 = mapaxes_data[5]; + + float norm_denominator = x1 * y2 - x2 * y1; + + if(norm_denominator == 0.0) { + mapaxes_data = NULL; + } + + return mapaxes_data; +} + static ecl_grid_type * ecl_grid_alloc_GRDECL_kw__(ecl_grid_type * global_grid , int dualp_flag, const ecl_kw_type * gridhead_kw , @@ -2084,7 +2166,7 @@ static ecl_grid_type * ecl_grid_alloc_GRDECL_kw__(ecl_grid_type * global_grid , const int * corsnum_data = NULL; if (mapaxes_kw != NULL) - mapaxes_data = ecl_kw_get_float_ptr( mapaxes_kw ); + mapaxes_data = ecl_grid_get_mapaxes_from_kw__(mapaxes_kw); if (actnum_kw != NULL) actnum_data = ecl_kw_get_int_ptr(actnum_kw); @@ -2347,7 +2429,6 @@ static ecl_grid_type * ecl_grid_alloc_EGRID(const char * grid_file) { } } main_grid->name = util_alloc_string_copy( grid_file ); - ecl_grid_init_nnc(main_grid, ecl_file); ecl_grid_init_nnc_amalgamated(main_grid, ecl_file); @@ -2459,7 +2540,7 @@ static ecl_grid_type * ecl_grid_alloc_GRID__(ecl_grid_type * global_grid , const { if ((grid_nr == 0) && (ecl_file_has_kw( ecl_file , MAPAXES_KW))) { const ecl_kw_type * mapaxes_kw = ecl_file_iget_named_kw( ecl_file , MAPAXES_KW , 0); - mapaxes_data = ecl_kw_get_float_ptr( mapaxes_kw); + mapaxes_data = ecl_grid_get_mapaxes_from_kw__(mapaxes_kw); } } @@ -2697,6 +2778,156 @@ ecl_grid_type * ecl_grid_alloc_dxv_dyv_dzv( int nx, int ny , int nz , const doub return grid; } + +ecl_grid_type * ecl_grid_alloc_dxv_dyv_dzv_depthz( int nx, int ny , int nz , const double * dxv , const double * dyv , const double * dzv , const double * depthz , const int * actnum) +{ + ecl_grid_type* grid = ecl_grid_alloc_empty(NULL, + FILEHEAD_SINGLE_POROSITY, + nx, ny, nz, + /*lgr_nr=*/0, /*init_valid=*/true); + + + /* First layer - where the DEPTHZ keyword applies. */ + { + int i,j; + int k = 0; + double y0 = 0; + for (j=0; j < ny; j++) { + double x0 = 0; + for (i = 0; i < nx; i++) { + int global_index = i + j*nx + k*nx*ny; + ecl_cell_type* cell = ecl_grid_get_cell(grid, global_index); + double z0 = depthz[ i + j*(nx + 1)]; + double z1 = depthz[ i + 1 + j*(nx + 1)]; + double z2 = depthz[ i + (j + 1)*(nx + 1)]; + double z3 = depthz[ i + 1 + (j + 1)*(nx + 1)]; + + + point_set(&cell->corner_list[0] , x0 , y0 , z0); + point_set(&cell->corner_list[1] , x0 + dxv[i] , y0 , z1); + point_set(&cell->corner_list[2] , x0 , y0 + dyv[j] , z2); + point_set(&cell->corner_list[3] , x0 + dxv[i] , y0 + dyv[j] , z3); + { + int c; + for (c = 0; c < 4; c++) { + cell->corner_list[c + 4] = cell->corner_list[c]; + point_shift(&cell->corner_list[c + 4] , 0 , 0 , dzv[0]); + } + } + x0 += dxv[i]; + } + y0 += dyv[j]; + } + } + + /* Remaining layers */ + { + int i,j,k; + for (k=1; k < nz; k++) { + for (j=0; j corner_list[c] = cell1->corner_list[c + 4]; + cell2->corner_list[c + 4] = cell1->corner_list[c + 4]; + point_shift( &cell2->corner_list[c + 4] , 0 , 0 , dzv[k]); + } + } + } + } + } + + { + int i,j,k; + for (k=0; k < nz; k++) { + for (j=0; j active = actnum[global_index]; + else + cell->active = ACTIVE; + } + } + } + } + + ecl_grid_update_index(grid); + return grid; +} + + +/** + This is a really broken function which is here only to support + creating rectangualar grids from OPM. The vectors dx,dy,dz and tops + are all of length nx*ny*nz. In principle all values of these four + arrays are independent - but taking that all out will create some + really weird looking grids. For physical correctness there should + be many constraints among the different values. + + The x and y position of a cell is found by adding the increments + from dx and dy, whereas the vertical position is read dircetly out + of the tops array. + + The ECLIPSE input format only requires size(dz) >= nx*ny and the + same for tops. The remaining layers will then be extrapolated; such + trickery must be performed before calling this function. +*/ + +ecl_grid_type * ecl_grid_alloc_dx_dy_dz_tops( int nx, int ny , int nz , const double * dx , const double * dy , const double * dz , const double * tops , const int * actnum) { + + ecl_grid_type* grid = ecl_grid_alloc_empty(NULL, + FILEHEAD_SINGLE_POROSITY, + nx, ny, nz, + 0, true); + int i, j, k; + double * y0 = util_calloc( nx, sizeof * y0 ); + + for (k=0; k < nz; k++) { + for (i=0; i < nx; i++) { + y0[i] = 0; + } + for (j=0; j < ny; j++) { + double x0 = 0; + for (i=0; i < nx; i++) { + int g = i + j*nx + k*nx*ny; + ecl_cell_type* cell = ecl_grid_get_cell(grid, g); + double z0 = tops[ g ]; + + point_set(&cell->corner_list[0] , x0 , y0[i] , z0); + point_set(&cell->corner_list[1] , x0 + dx[g] , y0[i] , z0); + point_set(&cell->corner_list[2] , x0 , y0[i] + dy[g] , z0); + point_set(&cell->corner_list[3] , x0 + dx[g] , y0[i] + dy[g] , z0); + + point_set(&cell->corner_list[4] , x0 , y0[i] , z0 + dz[g]); + point_set(&cell->corner_list[5] , x0 + dx[g] , y0[i] , z0 + dz[g]); + point_set(&cell->corner_list[6] , x0 , y0[i] + dy[g] , z0 + dz[g]); + point_set(&cell->corner_list[7] , x0 + dx[g] , y0[i] + dy[g] , z0 + dz[g]); + + x0 += dx[g]; + y0[i] += dy[g]; + + if (actnum != NULL) + cell->active = actnum[g]; + else + cell->active = ACTIVE; + } + } + } + free( y0 ); + + ecl_grid_update_index(grid); + return grid; +} + + /** This function will allocate a ecl_grid instance. As input it takes a filename, which can be both a GRID file and an EGRID file (both @@ -2936,77 +3167,358 @@ bool ecl_grid_exists( const char * case_input ) { } +static bool ecl_grid_compare_coarse_cells(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool verbose) { + if (vector_get_size( g1->coarse_cells ) == vector_get_size( g2->coarse_cells )) { + bool equal = true; + int c; + + for (c = 0; c < vector_get_size( g1->coarse_cells ); c++) { + const ecl_coarse_cell_type * coarse_cell1 = vector_iget_const( g1->coarse_cells , c); + const ecl_coarse_cell_type * coarse_cell2 = vector_iget_const( g2->coarse_cells , c); + + equal = ecl_coarse_cell_equal( coarse_cell1 , coarse_cell2 ); + if (!equal) + if (verbose) fprintf(stderr,"Difference in coarse cell:%d \n",c ); + + } + return equal; + } else + return false; +} + + +static bool ecl_grid_compare_cells(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool include_nnc , bool verbose) { + int g; + bool equal = true; + for (g = 0; g < g1->size; g++) { + bool this_equal = true; + ecl_cell_type *c1 = ecl_grid_get_cell( g1 , g ); + ecl_cell_type *c2 = ecl_grid_get_cell( g2 , g ); + ecl_cell_compare(c1 , c2 , include_nnc , &this_equal); + + if (!this_equal) { + if (verbose) { + int i,j,k; + ecl_grid_get_ijk1( g1 , g , &i , &j , &k); + + printf("Difference in cell: %d : %d,%d,%d nnc_equal:%d Volume:%g \n",g,i,j,k , nnc_info_equal( c1->nnc_info , c2->nnc_info) , ecl_cell_get_volume( c1 )); + printf("-----------------------------------------------------------------\n"); + ecl_cell_dump_ascii( c1 , i , j , k , stdout , NULL); + printf("-----------------------------------------------------------------\n"); + ecl_cell_dump_ascii( c2 , i , j , k , stdout , NULL ); + printf("-----------------------------------------------------------------\n"); + + } + equal = false; + break; + } + } + return equal; +} + +static bool ecl_grid_compare_index(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool verbose) { + bool equal = true; + + if (g1->total_active != g2->total_active) { + if (verbose) + fprintf(stderr,"Difference in total active:%d / %d\n",g1->total_active , g2->total_active); + equal = false; + } + + if (equal) { + if (memcmp( g1->index_map , g2->index_map , g1->size * sizeof * g1->index_map ) != 0) { + equal = false; + if (verbose) + fprintf(stderr,"Difference in index map \n"); + } + } + + if (equal) { + if (memcmp( g1->inv_index_map , g2->inv_index_map , g1->total_active * sizeof * g1->inv_index_map ) != 0) { + equal = false; + if (verbose) + fprintf(stderr,"Difference in inverse index map \n"); + } + } + + if (equal && (g1->dualp_flag != FILEHEAD_SINGLE_POROSITY)) { + if (g1->total_active_fracture != g2->total_active_fracture) { + if (verbose) + fprintf(stderr,"Difference in toal_active_fracture %d / %d \n",g1->total_active_fracture , g2->total_active_fracture); + equal = false; + } + + if (equal) { + if (memcmp( g1->fracture_index_map , g2->fracture_index_map , g1->size * sizeof * g1->fracture_index_map ) != 0) { + equal = false; + if (verbose) + fprintf(stderr,"Difference in fracture_index_map \n"); + } + } + + if (equal) { + if (memcmp( g1->inv_fracture_index_map , g2->inv_fracture_index_map , g1->total_active_fracture * sizeof * g1->inv_fracture_index_map ) != 0) { + equal = false; + if (verbose) + fprintf(stderr,"Difference in inv_fracture_index_map \n"); + } + } + + } + return equal; +} + + +static bool ecl_grid_compare_mapaxes(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool verbose) { + bool equal = true; + if (g1->use_mapaxes == g2->use_mapaxes) { + if (g1->use_mapaxes) { + if (memcmp( g1->mapaxes , g2->mapaxes , sizeof * g1->mapaxes ) != 0) + equal = false; + } + } else + equal = false; + + if (!equal && verbose) + fprintf(stderr,"Difference in mapaxes \n" ); + + return equal; +} + /** Return true if grids g1 and g2 are equal, and false otherwise. To return true all cells must be identical. */ -static bool ecl_grid_compare__(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool verbose) { +static bool ecl_grid_compare__(const ecl_grid_type * g1 , const ecl_grid_type * g2, bool include_nnc , bool verbose) { bool equal = true; if (g1->size != g2->size) equal = false; - else { - int g; - for (g = 0; g < g1->size; g++) { - bool this_equal = true; - ecl_cell_type *c1 = ecl_grid_get_cell( g1 , g ); - ecl_cell_type *c2 = ecl_grid_get_cell( g2 , g ); - ecl_cell_compare(c1 , c2 , &this_equal); - - if (!this_equal) { - if (verbose) { - int i,j,k; - ecl_grid_get_ijk1( g1 , g , &i , &j , &k); - if (i == 207 && j == 63) { - printf("Difference in cell: %d : %d,%d,%d Volume:%g \n",g,i,j,k , ecl_cell_get_volume( c1 )); - printf("-----------------------------------------------------------------\n"); - ecl_cell_dump_ascii( c1 , i , j , k , stdout ); - printf("-----------------------------------------------------------------\n"); - ecl_cell_dump_ascii( c2 , i , j , k , stdout ); - printf("-----------------------------------------------------------------\n"); - //break; - } - } - equal = false; - //break; - } + // The name of the parent grid corresponds to a filename; they can be different. + if (equal && g1->parent_grid) { + if (!util_string_equal( g1->name , g2->name )) { + equal = false; + if (verbose) + fprintf(stderr,"Difference in name %s <-> %s \n" , g1->name , g2->name); } } + + /* + When .GRID files are involved this is hardwired to FILEHEAD_SINGLE_POROSITY. + */ + if (g1->dualp_flag != g2->dualp_flag) { + equal = false; + if (verbose) + fprintf(stderr,"Dual porosity flags differ: %d / %d \n" , g1->dualp_flag , g2->dualp_flag); + } + if (equal) + equal = ecl_grid_compare_cells(g1 , g2 , include_nnc , verbose); + + if (equal) + equal = ecl_grid_compare_index( g1 , g2 , true /*verbose*/); + + if (equal) + equal = ecl_grid_compare_coarse_cells( g1 , g2 , verbose ); + + if (equal) + equal = ecl_grid_compare_mapaxes( g1 , g2 , verbose ); + return equal; } -bool ecl_grid_compare(const ecl_grid_type * g1 , const ecl_grid_type * g2 , bool include_lgr, bool verbose) { - bool equal = ecl_grid_compare__(g1 , g2 , verbose); +bool ecl_grid_compare(const ecl_grid_type * g1 , const ecl_grid_type * g2 , bool include_lgr, bool include_nnc , bool verbose) { + bool equal = ecl_grid_compare__(g1 , g2 , include_nnc , verbose); + if (equal && include_lgr) { if (vector_get_size( g1->LGR_list ) == vector_get_size( g2->LGR_list )) { int grid_nr; for (grid_nr = 0; grid_nr < vector_get_size( g1->LGR_list ); grid_nr++) { const ecl_grid_type * lgr1 = vector_iget_const( g1->LGR_list , grid_nr); const ecl_grid_type * lgr2 = vector_iget_const( g2->LGR_list , grid_nr); - - equal = ecl_grid_compare__(lgr1 , lgr2 , verbose); + + equal = ecl_grid_compare__(lgr1 , lgr2 , include_nnc , verbose); if (!equal) break; } - } + } else + equal = false; } return equal; } + /*****************************************************************/ bool ecl_grid_cell_contains_xyz1( const ecl_grid_type * ecl_grid , int global_index , double x , double y , double z) { + const double min_volume = 1e-9; point_type p; + ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index ); + point_set( &p , x , y , z); + /* + 1. first check if the point z value is below the deepest point of + the cell, or above the shallowest => return false. + + 2. should do similar fast checks in x/y direction. + + 3. full geometric verification. + */ + if (GET_CELL_FLAG(cell , CELL_FLAG_TAINTED)) + return false; + + if (p.z < ecl_cell_min_z( cell )) + return false; + + if (p.z > ecl_cell_max_z( cell )) + return false; + + if (p.x < ecl_cell_min_x( cell )) + return false; + + if (p.x > ecl_cell_max_x( cell )) + return false; + + if (p.y < ecl_cell_min_y( cell )) + return false; - return ecl_cell_contains_point( ecl_grid_get_cell( ecl_grid , global_index) , &p); + if (p.y > ecl_cell_max_y( cell )) + return false; + + { + int i,j,k; + ecl_grid_get_ijk1( ecl_grid , global_index , &i , &j , &k); + ecl_cell_assert_center( cell ); + + /* + Special case checks for the corner points. + */ + if (point_equal( &p , &cell->corner_list[0])) + return true; + + if (point_equal( &p , &cell->corner_list[1] )) { + if (i == (ecl_grid->nx - 1)) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[2])) { + if (j == (ecl_grid->ny - 1)) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[3])) { + if ((j == (ecl_grid->ny - 1)) && + (i == (ecl_grid->nx - 1))) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[4])) { + if (k == (ecl_grid->nz - 1)) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[5] )) { + if ((i == (ecl_grid->nx - 1)) && + (k == (ecl_grid->nz - 1))) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[6] )) { + if ((j == (ecl_grid->ny - 1)) && + (k == (ecl_grid->nz - 1))) + return true; + else + return false; + } + + if (point_equal( &p , &cell->corner_list[7] )) { + if ((i == (ecl_grid->nx - 1)) && + (j == (ecl_grid->ny - 1)) && + (k == (ecl_grid->nz - 1))) + return true; + else + return false; + } + + { + double sign = 1.0; + int plane_nr = 0; + double signed_volume = ecl_cell_get_signed_volume( cell ); + if (fabs(signed_volume) > min_volume) { + point_type * p0; + point_type * p1; + point_type * p2; + + if (signed_volume < 0) + sign = -1; + { + while (true) { + p0 = &cell->corner_list[ bounding_planes[plane_nr][0] ]; + p1 = &cell->corner_list[ bounding_planes[plane_nr][1] ]; + p2 = &cell->corner_list[ bounding_planes[plane_nr][2] ]; + + if (point_equal(p0, p1) || point_equal(p0,p2) || point_equal(p1,p2)) + return false; + + if (sign * point3_plane_distance(p0 , p1 , p2 , &p ) < 0) + return false; + + plane_nr++; + if (plane_nr == 6) + return true; + } + } + } else + return false; + } + } + + + /* + More 'correct' version based on tetrahedron decomposition; + unfortunately getting this to be reliable proved to difficult. + + { + const int method = ecl_cell_get_tetrahedron_method( cell ); + int tetrahedron_nr = 0; + tetrahedron_type tet; + if (ecl_cell_get_volume( cell ) > 0) { + // + // General check if point is inside tetrahedrons. Does never + // exit from this loop - only returns from the whole function. + // + while (true) { + ecl_cell_init_tetrahedron( cell , &tet , method , tetrahedron_nr ); + + if (tetrahedron_contains( &tet , &p )) + return true; + + tetrahedron_nr++; + if (tetrahedron_nr == 12) + return false; + } + } else + return false; + } + util_abort("%s: internal error - should not be here \n",__func__); + return false; + */ } @@ -3071,7 +3583,7 @@ static int ecl_grid_box_contains_xyz( const ecl_grid_type * grid , int i1, int i global_index = ecl_grid_get_global_index3( grid , i , j , k); if (!grid->visited[ global_index ]) { grid->visited[ global_index ] = true; - if (ecl_cell_contains_point( ecl_grid_get_cell( grid , global_index ) , p )) { + if (ecl_grid_cell_contains_xyz1( grid , global_index , p->x , p->y , p->z )) { return global_index; } } @@ -3115,7 +3627,7 @@ int ecl_grid_get_global_index_from_xyz(ecl_grid_type * grid , double x , double if (start_index >= 0) { /* Try start index */ - if (ecl_cell_contains_point( ecl_grid_get_cell( grid , start_index) , &p )) + if (ecl_grid_cell_contains_xyz1( grid , start_index , x,y,z)) return start_index; else { /* Try neighbours */ @@ -3167,7 +3679,7 @@ int ecl_grid_get_global_index_from_xyz(ecl_grid_type * grid , double x , double while (true) { int current_index = ((index + start_index) % grid->size); bool cell_contains; - cell_contains = ecl_cell_contains_point( ecl_grid_get_cell( grid , current_index) , &p ); + cell_contains = ecl_grid_cell_contains_xyz1( grid , current_index , x , y , z); if (cell_contains) { global_index = current_index; @@ -3287,6 +3799,7 @@ void ecl_grid_free__( void * arg ) { void ecl_grid_get_distance(const ecl_grid_type * grid , int global_index1, int global_index2 , double *dx , double *dy , double *dz) { ecl_cell_type * cell1 = ecl_grid_get_cell( grid , global_index1); ecl_cell_type * cell2 = ecl_grid_get_cell( grid , global_index2); + ecl_cell_assert_center( cell1 ); ecl_cell_assert_center( cell2 ); { @@ -3526,7 +4039,7 @@ void ecl_grid_get_xyz3(const ecl_grid_type * grid , int i, int j , int k, double */ -void ecl_grid_get_corner_xyz1(const ecl_grid_type * grid , int global_index , int corner_nr , double * xpos , double * ypos , double * zpos ) { +void ecl_grid_get_cell_corner_xyz1(const ecl_grid_type * grid , int global_index , int corner_nr , double * xpos , double * ypos , double * zpos ) { if ((corner_nr >= 0) && (corner_nr <= 7)) { const ecl_cell_type * cell = ecl_grid_get_cell( grid , global_index ); const point_type point = cell->corner_list[ corner_nr ]; @@ -3537,9 +4050,41 @@ void ecl_grid_get_corner_xyz1(const ecl_grid_type * grid , int global_index , in } -void ecl_grid_get_corner_xyz3(const ecl_grid_type * grid , int i , int j , int k, int corner_nr , double * xpos , double * ypos , double * zpos ) { +void ecl_grid_get_cell_corner_xyz3(const ecl_grid_type * grid , int i , int j , int k, int corner_nr , double * xpos , double * ypos , double * zpos ) { const int global_index = ecl_grid_get_global_index__(grid , i , j , k ); - ecl_grid_get_corner_xyz1( grid , global_index , corner_nr , xpos , ypos , zpos); + ecl_grid_get_cell_corner_xyz1( grid , global_index , corner_nr , xpos , ypos , zpos); +} + + +void ecl_grid_get_corner_xyz(const ecl_grid_type * grid , int i , int j , int k, double * xpos , double * ypos , double * zpos ) { + if (i < 0 || i > grid->nx) + util_abort("%s: invalid i value:%d Valid range: [0,%d] \n",__func__ , i,grid->nx); + + if (j < 0 || j > grid->ny) + util_abort("%s: invalid j value:%d Valid range: [0,%d] \n",__func__ , j,grid->ny); + + if (k < 0 || k > grid->nz) + util_abort("%s: invalid k value:%d Valid range: [0,%d] \n",__func__ , k,grid->nz); + + { + int corner_nr = 0; + if (i == grid->nx) { + i -= 1; + corner_nr += 1; + } + + if (j == grid->ny) { + j -= 1; + corner_nr += 2; + } + + if (k == grid->nz) { + k -= 1; + corner_nr += 4; + } + + ecl_grid_get_cell_corner_xyz3( grid , i , j , k , corner_nr , xpos , ypos , zpos); + } } @@ -3948,12 +4493,38 @@ int ecl_grid_get_active_size( const ecl_grid_type * ecl_grid ) { return ecl_grid_get_nactive( ecl_grid ); } + +bool ecl_grid_cell_regular1( const ecl_grid_type * ecl_grid, int global_index ) { + double x,y,z; + ecl_grid_get_xyz1( ecl_grid , global_index , &x,&y,&z); + return ecl_grid_cell_contains_xyz1( ecl_grid , global_index , x , y , z ); +} + + +bool ecl_grid_cell_regular3( const ecl_grid_type * ecl_grid, int i,int j,int k) { + int global_index = ecl_grid_get_global_index3( ecl_grid , i,j,k); + return ecl_grid_cell_regular1( ecl_grid , global_index ); +} + + + + double ecl_grid_get_cell_volume1( const ecl_grid_type * ecl_grid, int global_index ) { ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index ); + int i,j,k; + ecl_grid_get_ijk1( ecl_grid , global_index, &i , &j , &k); return ecl_cell_get_volume( cell ); } +double ecl_grid_get_cell_volume1_tskille( const ecl_grid_type * ecl_grid, int global_index ) { + ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index ); + return ecl_cell_get_volume_tskille( cell ); +} + + + + double ecl_grid_get_cell_volume3( const ecl_grid_type * ecl_grid, int i , int j , int k) { int global_index = ecl_grid_get_global_index3( ecl_grid , i , j , k); @@ -4336,7 +4907,7 @@ static void ecl_grid_dump__(const ecl_grid_type * grid , FILE * stream) { } -static void ecl_grid_dump_ascii__(const ecl_grid_type * grid , bool active_only , FILE * stream) { +static void ecl_grid_dump_ascii__(ecl_grid_type * grid , bool active_only , FILE * stream) { fprintf(stream , "Grid nr : %d\n",grid->lgr_nr); fprintf(stream , "Grid name : %s\n",grid->name); fprintf(stream , "nx : %6d\n",grid->nx); @@ -4348,11 +4919,11 @@ static void ecl_grid_dump_ascii__(const ecl_grid_type * grid , bool active_only { int l; for (l=0; l < grid->size; l++) { - const ecl_cell_type * cell = ecl_grid_get_cell( grid , l ); + ecl_cell_type * cell = ecl_grid_get_cell( grid , l ); if (cell->active_index[MATRIX_INDEX] >= 0 || !active_only) { int i,j,k; ecl_grid_get_ijk1( grid , l , &i , &j , &k); - ecl_cell_dump_ascii( cell , i,j,k , stream ); + ecl_cell_dump_ascii( cell , i,j,k , stream , NULL); } } } @@ -4377,16 +4948,29 @@ void ecl_grid_dump(const ecl_grid_type * grid , FILE * stream) { } } -void ecl_grid_dump_ascii(const ecl_grid_type * grid , bool active_only , FILE * stream) { +void ecl_grid_dump_ascii(ecl_grid_type * grid , bool active_only , FILE * stream) { ecl_grid_dump_ascii__( grid , active_only , stream ); { int i; for (i = 0; i < vector_get_size( grid->LGR_list ); i++) - ecl_grid_dump_ascii__( vector_iget_const( grid->LGR_list , i) , active_only , stream ); + ecl_grid_dump_ascii__( vector_iget( grid->LGR_list , i) , active_only , stream ); } } +void ecl_grid_dump_ascii_cell1(ecl_grid_type * grid , int global_index , FILE * stream , const double * offset) { + ecl_cell_type * cell = ecl_grid_get_cell( grid , global_index ); + int i,j,k; + ecl_grid_get_ijk1( grid , global_index , &i , &j , &k); + ecl_cell_dump_ascii(cell , i,j,k, stream , offset); +} + + +void ecl_grid_dump_ascii_cell3(ecl_grid_type * grid , int i , int j , int k , FILE * stream , const double * offset) { + int global_index = ecl_grid_get_global_index3(grid , i,j,k); + ecl_cell_type * cell = ecl_grid_get_cell( grid , global_index ); + ecl_cell_dump_ascii(cell , i,j,k, stream , offset); +} /*****************************************************************/ @@ -4422,6 +5006,17 @@ void ecl_grid_dump_ascii(const ecl_grid_type * grid , bool active_only , FILE * */ +bool ecl_grid_use_mapaxes( const ecl_grid_type * grid ) { + return grid->use_mapaxes; +} + +void ecl_grid_init_mapaxes_data_double( const ecl_grid_type * grid , double * mapaxes) { + int i; + for (i = 0; i < 6; i++) + mapaxes[i] = grid->mapaxes[i]; +} + + static const float * ecl_grid_get_mapaxes( const ecl_grid_type * grid ) { if (grid->use_mapaxes) return grid->mapaxes; @@ -4668,7 +5263,7 @@ static int ecl_grid_get_top_valid_index( const ecl_grid_type * grid , int i , in -static bool ecl_grid_init_coord_section__( const ecl_grid_type * grid , int i, int j , int i_corner, int j_corner , bool force_set , float * coord ) { +static bool ecl_grid_init_coord_section__( const ecl_grid_type * grid , int i, int j , int i_corner, int j_corner , bool force_set , float * coord_float , double * coord_double ) { const int top_index = ecl_grid_get_top_valid_index( grid , i , j ); const int bottom_index = ecl_grid_get_bottom_valid_index( grid , i , j ); @@ -4701,13 +5296,27 @@ static bool ecl_grid_init_coord_section__( const ecl_grid_type * grid , int i, i point_mapaxes_invtransform( &top_point , grid->origo , grid->unit_x , grid->unit_y ); point_mapaxes_invtransform( &bottom_point , grid->origo , grid->unit_x , grid->unit_y ); - coord[coord_offset] = top_point.x; - coord[coord_offset + 1] = top_point.y; - coord[coord_offset + 2] = top_point.z; - - coord[coord_offset + 3] = bottom_point.x; - coord[coord_offset + 4] = bottom_point.y; - coord[coord_offset + 5] = bottom_point.z; + if (coord_float) { + coord_float[coord_offset] = top_point.x; + + coord_float[coord_offset + 1] = top_point.y; + coord_float[coord_offset + 2] = top_point.z; + coord_float[coord_offset + 3] = bottom_point.x; + coord_float[coord_offset + 4] = bottom_point.y; + coord_float[coord_offset + 5] = bottom_point.z; + } + + + if (coord_double) { + coord_double[coord_offset] = top_point.x; + coord_double[coord_offset + 1] = top_point.y; + coord_double[coord_offset + 2] = top_point.z; + + coord_double[coord_offset + 3] = bottom_point.x; + coord_double[coord_offset + 4] = bottom_point.y; + coord_double[coord_offset + 5] = bottom_point.z; + } + return true; } @@ -4716,7 +5325,7 @@ static bool ecl_grid_init_coord_section__( const ecl_grid_type * grid , int i, i } -static void ecl_grid_init_coord_section( const ecl_grid_type * grid , int i, int j , float * coord ) { +static void ecl_grid_init_coord_section( const ecl_grid_type * grid , int i, int j , float * coord_float , double * coord_double ) { int i_corner = 0; int j_corner = 0; @@ -4730,13 +5339,13 @@ static void ecl_grid_init_coord_section( const ecl_grid_type * grid , int i, int j_corner = 1; } - ecl_grid_init_coord_section__( grid , i,j, i_corner,j_corner, /*force_set=*/true, coord); + ecl_grid_init_coord_section__( grid , i,j, i_corner,j_corner, /*force_set=*/true, coord_float , coord_double); } -static void ecl_grid_init_coord_data( const ecl_grid_type * grid , float * coord ) { +void ecl_grid_init_coord_data( const ecl_grid_type * grid , float * coord ) { /* The coord vector contains the points defining the top and bottom of the pillars. The vector contains (nx + 1) * (ny + 1) 6 element @@ -4746,7 +5355,23 @@ static void ecl_grid_init_coord_data( const ecl_grid_type * grid , float * coord int i,j; for (j=0; j <= grid->ny; j++) { for (i=0; i <= grid->nx; i++) - ecl_grid_init_coord_section( grid , i , j , coord ); + ecl_grid_init_coord_section( grid , i , j , coord , NULL); + + } +} + + +void ecl_grid_init_coord_data_double( const ecl_grid_type * grid , double * coord ) { + /* + The coord vector contains the points defining the top and bottom + of the pillars. The vector contains (nx + 1) * (ny + 1) 6 element + chunks of data, where each chunk contains the coordinates (x,y,z) + f the top and the bottom of the pillar. + */ + int i,j; + for (j=0; j <= grid->ny; j++) { + for (i=0; i <= grid->nx; i++) + ecl_grid_init_coord_section( grid , i , j , NULL , coord); } } @@ -4766,13 +5391,15 @@ void ecl_grid_assert_coord_kw( ecl_grid_type * grid ) { } } - +int ecl_grid_get_coord_size( const ecl_grid_type * ecl_grid) { + return (ecl_grid->nx + 1) * (ecl_grid->ny + 1) * 6; +} /*****************************************************************/ -static void ecl_grid_init_zcorn_data( const ecl_grid_type * grid , float * zcorn ) { +static void ecl_grid_init_zcorn_data__( const ecl_grid_type * grid , float * zcorn_float , double * zcorn_double ) { int nx = grid->nx; int ny = grid->ny; int nz = grid->nz; @@ -4790,16 +5417,38 @@ static void ecl_grid_init_zcorn_data( const ecl_grid_type * grid , float * zcorn point_type p2 = cell->corner_list[ 4*l + 2]; point_type p3 = cell->corner_list[ 4*l + 3]; - zcorn[k*8*nx*ny + j*4*nx + 2*i + l*4*nx*ny] = p0.z; - zcorn[k*8*nx*ny + j*4*nx + 2*i + 1 + l*4*nx*ny] = p1.z; - zcorn[k*8*nx*ny + j*4*nx + 2*nx + 2*i + l*4*nx*ny] = p2.z; - zcorn[k*8*nx*ny + j*4*nx + 2*nx + 2*i + 1 + l*4*nx*ny] = p3.z; + int z1 = k*8*nx*ny + j*4*nx + 2*i + l*4*nx*ny; + int z2 = k*8*nx*ny + j*4*nx + 2*i + 1 + l*4*nx*ny; + int z3 = k*8*nx*ny + j*4*nx + 2*nx + 2*i + l*4*nx*ny; + int z4 = k*8*nx*ny + j*4*nx + 2*nx + 2*i + 1 + l*4*nx*ny; + + if (zcorn_float) { + zcorn_float[z1] = p0.z; + zcorn_float[z2] = p1.z; + zcorn_float[z3] = p2.z; + zcorn_float[z4] = p3.z; + } + + if (zcorn_double) { + zcorn_double[z1] = p0.z; + zcorn_double[z2] = p1.z; + zcorn_double[z3] = p2.z; + zcorn_double[z4] = p3.z; + } } } } } } +void ecl_grid_init_zcorn_data( const ecl_grid_type * grid , float * zcorn ) { + ecl_grid_init_zcorn_data__( grid , zcorn , NULL ); +} + +void ecl_grid_init_zcorn_data_double( const ecl_grid_type * grid , double * zcorn ) { + ecl_grid_init_zcorn_data__( grid , NULL , zcorn ); +} + float * ecl_grid_alloc_zcorn_data( const ecl_grid_type * grid ) { float * zcorn = util_calloc( 8 * grid->size , sizeof * zcorn ); @@ -4815,9 +5464,14 @@ ecl_kw_type * ecl_grid_alloc_zcorn_kw( const ecl_grid_type * grid ) { return zcorn_kw; } + +int ecl_grid_get_zcorn_size( const ecl_grid_type * grid ) { + return 8 * grid->size; +} + /*****************************************************************/ -static void ecl_grid_init_actnum_data( const ecl_grid_type * grid , int * actnum ) { +void ecl_grid_init_actnum_data( const ecl_grid_type * grid , int * actnum ) { int i; for (i=0; i < grid->size; i++) { const ecl_cell_type * cell = ecl_grid_get_cell( grid , i ); @@ -4833,7 +5487,6 @@ static void ecl_grid_init_actnum_data( const ecl_grid_type * grid , int * actnum int group_size = ecl_coarse_cell_get_size( coarse_cell ); const int * index_ptr = ecl_coarse_cell_get_index_ptr( coarse_cell ); int j; - for (j=0; j < group_size; j++) actnum[index_ptr[j]] = INACTIVE; } @@ -4934,6 +5587,19 @@ ecl_kw_type * ecl_grid_alloc_gridhead_kw( int nx, int ny , int nz , int grid_nr) /*****************************************************************/ +void ecl_grid_reset_actnum( ecl_grid_type * grid , const int * actnum ) { + const int global_size = ecl_grid_get_global_size( grid ); + int g; + for (g=0; g < global_size; g++) { + ecl_cell_type * cell = ecl_grid_get_cell( grid , g ); + if (actnum) + cell->active = actnum[g]; + else + cell->active = 1; + } + ecl_grid_update_index( grid ); +} + static void ecl_grid_fwrite_EGRID__( ecl_grid_type * grid , fortio_type * fortio) { bool is_lgr = true; @@ -5137,3 +5803,5 @@ int ecl_grid_get_num_nnc( const ecl_grid_type * grid ) { } return num_nnc; } + + diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_init_file.c b/ThirdParty/Ert/devel/libecl/src/ecl_init_file.c index bbce79d900..b576b763ed 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_init_file.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_init_file.c @@ -174,7 +174,7 @@ void ecl_init_file_fwrite_header( fortio_type * fortio , const ecl_grid_type * e } { - ecl_kw_type * doubhead_kw = ecl_init_file_alloc_DOUBHEAD( ecl_grid , phases , start_date ); + ecl_kw_type * doubhead_kw = ecl_init_file_alloc_DOUBHEAD( ); ecl_kw_fwrite( doubhead_kw , fortio ); ecl_kw_free( doubhead_kw ); } diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_kw.c b/ThirdParty/Ert/devel/libecl/src/ecl_kw.c index c2bad9bc4b..80073779d4 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_kw.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_kw.c @@ -80,8 +80,6 @@ UTIL_IS_INSTANCE_FUNCTION(ecl_kw , ECL_KW_TYPE_ID ) #define COLUMNS_INT 6 #define COLUMNS_MESSAGE 1 #define COLUMNS_BOOL 25 - -#define ECL_KW_FORTIO_HEADER_SIZE 4 + ECL_STRING_LENGTH + 4 + ECL_TYPE_LENGTH + 4 /*****************************************************************/ @@ -751,11 +749,11 @@ double ecl_kw_iget_as_double(const ecl_kw_type * ecl_kw , int index) { float ecl_kw_iget_as_float(const ecl_kw_type * ecl_kw , int i) { if (ecl_kw->ecl_type == ECL_FLOAT_TYPE) - return ecl_kw_iget_float( ecl_kw , i); /* Here the compiler will silently insert a float -> double conversion. */ + return ecl_kw_iget_float( ecl_kw , i); else if (ecl_kw->ecl_type == ECL_DOUBLE_TYPE) - return ecl_kw_iget_double( ecl_kw, i); + return (float) ecl_kw_iget_double( ecl_kw, i); else { - util_abort("%s: can not be converted to double - no data for you! \n",__func__); + util_abort("%s: can not be converted to float - no data for you! \n",__func__); return -1; } } @@ -1159,34 +1157,65 @@ void ecl_kw_fread_data(ecl_kw_type *ecl_kw, fortio_type *fortio) { } } + +void ecl_kw_fread_indexed_data(fortio_type * fortio, offset_type data_offset, ecl_type_enum ecl_type, int element_count, const int_vector_type* index_map, char* buffer) { + const int block_size = get_blocksize( ecl_type ); + FILE *stream = fortio_get_FILE( fortio ); + int index; + int element_size = ecl_util_get_sizeof_ctype(ecl_type); + + if(ecl_type == ECL_CHAR_TYPE || ecl_type == ECL_MESS_TYPE) { + element_size = ECL_STRING_LENGTH; + } + + + for(index = 0; index < int_vector_size(index_map); index++) { + int element_index = int_vector_iget(index_map, index); + + if(element_index < 0 || element_index >= element_count) { + util_abort("%s: Element index is out of range 0 <= %d < %d\n", __func__, element_index, element_count); + } + fortio_data_fseek(fortio, data_offset, element_index, element_size, element_count, block_size); + util_fread(&buffer[index * element_size], element_size, 1, stream, __func__); + } + + if (ECL_ENDIAN_FLIP) { + util_endian_flip_vector(buffer, element_size, int_vector_size(index_map)); + } +} + /** Allocates storage and reads data. */ void ecl_kw_fread_realloc_data(ecl_kw_type *ecl_kw, fortio_type *fortio) { ecl_kw_alloc_data(ecl_kw); - return ecl_kw_fread_data(ecl_kw , fortio); + ecl_kw_fread_data(ecl_kw , fortio); } /** Static method without a class instance. */ -void ecl_kw_fskip_data__( ecl_type_enum ecl_type , int size , fortio_type * fortio) { +void ecl_kw_fskip_data__( ecl_type_enum ecl_type , const int element_count , fortio_type * fortio) { bool fmt_file = fortio_fmt_file(fortio); - if (size > 0) { + if (element_count > 0) { if (fmt_file) { /* Formatted skipping actually involves reading the data - nice ??? */ ecl_kw_type * tmp_kw = ecl_kw_alloc_empty( ); - ecl_kw_initialize( tmp_kw , "WORK" , size , ecl_type ); + ecl_kw_initialize( tmp_kw , "WORK" , element_count , ecl_type ); ecl_kw_alloc_data(tmp_kw); ecl_kw_fread_data(tmp_kw , fortio); ecl_kw_free( tmp_kw ); } else { const int blocksize = get_blocksize( ecl_type ); - const int blocks = size / blocksize + (size % blocksize == 0 ? 0 : 1); - int ib; - for (ib = 0; ib < blocks; ib++) - fortio_fskip_record(fortio); + const int block_count = element_count / blocksize + (element_count % blocksize == 0 ? 0 : 1); + + int element_size = ecl_util_get_sizeof_ctype(ecl_type ); + if(ecl_type == ECL_CHAR_TYPE || ecl_type == ECL_MESS_TYPE) { + element_size = ECL_STRING_LENGTH; + } + + fortio_data_fskip(fortio, element_size, element_count, block_count); } } } @@ -1362,8 +1391,12 @@ void ecl_kw_set_data_ptr(ecl_kw_type * ecl_kw , void * data) { void ecl_kw_alloc_data(ecl_kw_type *ecl_kw) { if (ecl_kw->shared_data) util_abort("%s: trying to allocate data for ecl_kw object which has been declared with shared storage - aborting \n",__func__); - - ecl_kw->data = util_realloc(ecl_kw->data , ecl_kw->size * ecl_kw->sizeof_ctype ); + + { + size_t byte_size = ecl_kw->size * ecl_kw->sizeof_ctype; + ecl_kw->data = util_realloc(ecl_kw->data , byte_size ); + memset(ecl_kw->data , 0 , byte_size); + } } @@ -1720,7 +1753,7 @@ void ecl_kw_get_data_as_float(const ecl_kw_type * ecl_kw , float * float_data) { const int * int_data = (const int *) ecl_kw->data; int i; for (i=0; i < ecl_kw->size; i++) - float_data[i] = int_data[i]; + float_data[i] = (float) int_data[i]; } else { fprintf(stderr,"%s: type can not be converted to float - aborting \n",__func__); ecl_kw_summarize(ecl_kw); @@ -2349,7 +2382,7 @@ void ecl_kw_inplace_inv(ecl_kw_type * my_kw) { { float *my_float = (float *) my_data; for (i=0; i < size; i++) - my_float[i] = 1.0 / my_float[i]; + my_float[i] = 1.0f / my_float[i]; break; } default: @@ -2577,6 +2610,14 @@ double ecl_kw_element_sum_float( const ecl_kw_type * ecl_kw ) { return 0; } + +int ecl_kw_element_sum_int( const ecl_kw_type * ecl_kw ) { + int int_sum; + ecl_kw_element_sum( ecl_kw , &int_sum); + + return int_sum; +} + /*****************************************************************/ #define ECL_KW_FPRINTF_DATA(ctype) \ diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_kw_grdecl.c b/ThirdParty/Ert/devel/libecl/src/ecl_kw_grdecl.c index cc6d71c29a..07ef19cd09 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_kw_grdecl.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_kw_grdecl.c @@ -173,7 +173,8 @@ static bool ecl_kw_grdecl_fseek_kw__(const char * kw , FILE * stream) { char next_kw[256]; fscanf( stream , "%s" , next_kw); if (strcmp( kw , next_kw ) == 0) { - util_fseek( stream , -strlen(next_kw) , SEEK_CUR); + offset_type offset = (offset_type) strlen(next_kw); + util_fseek( stream , -offset , SEEK_CUR); return true; } } else { diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_region.c b/ThirdParty/Ert/devel/libecl/src/ecl_region.c index cab67acd54..26a205a4f7 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_region.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_region.c @@ -1403,3 +1403,14 @@ void ecl_region_set_name( ecl_region_type * region , const char * name ) { const char * ecl_region_get_name( const ecl_region_type * region ) { return region->name; } + + +bool ecl_region_equal( const ecl_region_type * region1 , const ecl_region_type * region2) { + if (region1->parent_grid == region2->parent_grid) { // Must be exactly the same grid instance to compare as equal. + if (memcmp(region1->active_mask , region2->active_mask , region1->grid_vol * sizeof * region1->active_mask ) == 0) + return true; + else + return false; + } else + return false; +} diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_smspec.c b/ThirdParty/Ert/devel/libecl/src/ecl_smspec.c index 0db3827c1f..36bc9703ed 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_smspec.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_smspec.c @@ -515,7 +515,14 @@ ecl_smspec_var_type ecl_smspec_identify_var_type(const char * var) { var_type = ECL_SMSPEC_LOCAL_WELL_VAR; break; default: - util_abort("%s: not recognized: %s \n",__func__ , var); + /* + The documentation explicitly mentions keywords starting with + LB, LC and LW as special types, but keywords starting with + L[^BCW] are also valid. These come in the misceallaneous + category; at least the LLINEAR keyword is an example of such + a keyword. + */ + var_type = ECL_SMSPEC_MISC_VAR; } break; case('N'): diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_sum_data.c b/ThirdParty/Ert/devel/libecl/src/ecl_sum_data.c index 73b1e87a1c..86362beac7 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_sum_data.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_sum_data.c @@ -624,7 +624,7 @@ void ecl_sum_data_init_interp_from_sim_time( const ecl_sum_data_type * data , ti const ecl_sum_tstep_type * ministep2 = ecl_sum_data_iget_ministep( data , index2 ); const ecl_sum_tstep_type * ministep1; time_t sim_time2 = ecl_sum_tstep_get_sim_time( ministep2 ); - + index1 = index2; while (true) { @@ -642,8 +642,8 @@ void ecl_sum_data_init_interp_from_sim_time( const ecl_sum_data_type * data , ti { double weight2 = (sim_time - ecl_sum_tstep_get_sim_time( ministep1 )); double weight1 = -(sim_time - ecl_sum_tstep_get_sim_time( ministep2 )); - - + + *_index1 = index1; *_index2 = index2; *_weight1 = weight1 / ( weight1 + weight2 ); @@ -1126,7 +1126,25 @@ double ecl_sum_data_interp_get(const ecl_sum_data_type * data , int time_index1 double ecl_sum_data_get_from_sim_time( const ecl_sum_data_type * data , time_t sim_time , const smspec_node_type * smspec_node) { int params_index = smspec_node_get_params_index( smspec_node ); if (smspec_node_is_rate( smspec_node )) { - int time_index = ecl_sum_data_get_index_from_sim_time( data , sim_time ); + int time_index; + /* + In general the mapping from sim_time to index is based on half + open intervals, which are closed in the upper end: + + []<------------]<--------------]<-----------] + t0 t1 t2 t3 + + However - as indicated on the figure above there is a zero + measure point right at the start which corresponds to + time_index == 0; this is to ensure that there is correspondance + with the ECLIPSE results if you ask for a value interpolated to + the starting time. + */ + if (sim_time == time_interval_get_start( data->sim_time )) + time_index = 0; + else + time_index = ecl_sum_data_get_index_from_sim_time( data , sim_time ); + return ecl_sum_data_iget( data , time_index , params_index); } else { /* Interpolated lookup based on two (hopefully) consecutive ministeps. */ diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_util.c b/ThirdParty/Ert/devel/libecl/src/ecl_util.c index 6c72c7976d..77d66cdc0c 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_util.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_util.c @@ -1267,18 +1267,14 @@ static int ecl_util_get_num_parallel_cpu__(parser_type* parser, FILE* stream, co { stringlist_type * tokens = parser_tokenize_buffer( parser , buffer , true ); - int i; - char * item = NULL; - for (i=0; i < stringlist_get_size( tokens ); i++) { - item = util_realloc_string_copy( item , stringlist_iget( tokens , i )); - util_strupr( item ); - if (( util_string_equal( item , "DISTRIBUTED" )) || - ( util_string_equal( item , "DIST" ))) { - num_cpu = atoi( stringlist_iget( tokens , i - 1)); - break; - } - } - free( item ); + + if (stringlist_get_size( tokens ) > 0) { + const char * num_cpu_string = stringlist_iget( tokens , 0 ); + if (!util_sscanf_int( num_cpu_string , &num_cpu)) + fprintf(stderr,"** Warning: failed to interpret:%s as integer - assuming one CPU\n",num_cpu_string); + } else + fprintf(stderr,"** Warning: failed to load data for PARALLEL keyword - assuming one CPU\n"); + stringlist_free( tokens ); } free( buffer ); @@ -1342,6 +1338,23 @@ int ecl_util_get_num_cpu(const char * data_file) { } +ecl_unit_enum ecl_util_get_unit_set(const char * data_file) { + ecl_unit_enum units = ECL_METRIC_UNITS; + parser_type * parser = parser_alloc(" \t\r\n" , "\"\'" , NULL , NULL , "--" , "\n"); + FILE * stream = util_fopen(data_file , "r"); + + if (parser_fseek_string( parser , stream , "FIELD" , true , true)) { /* Seeks case insensitive. */ + units = ECL_FIELD_UNITS; + } else if (parser_fseek_string( parser , stream , "LAB" , true , true)) { /* Seeks case insensitive. */ + units = ECL_LAB_UNITS; + } + + parser_free( parser ); + fclose(stream); + return units; +} + + /** This function checks that all the characters in the input @basename are either lowercase, or uppercase. If presented with a mixed-case @@ -1351,12 +1364,15 @@ int ecl_util_get_num_cpu(const char * data_file) { bool ecl_util_valid_basename( const char * basename ) { + + char * eclbasename = util_split_alloc_filename(basename); + int upper_count = 0; int lower_count = 0; int index; - for (index = 0; index < strlen( basename ); index++) { - int c = basename[index]; + for (index = 0; index < strlen( eclbasename ); index++) { + int c = eclbasename[index]; if (isalpha(c)) { if (isupper(c)) upper_count++; @@ -1365,6 +1381,8 @@ bool ecl_util_valid_basename( const char * basename ) { } } + free(eclbasename); + if ((lower_count * upper_count) != 0) return false; else @@ -1375,14 +1393,17 @@ bool ecl_util_valid_basename( const char * basename ) { bool ecl_util_valid_basename_fmt(const char * basename_fmt) { bool valid; - const char * percent_ptr = strchr(basename_fmt, '%'); + + char * eclbasename_fmt = util_split_alloc_filename(basename_fmt); + + const char * percent_ptr = strchr(eclbasename_fmt, '%'); if (percent_ptr) { percent_ptr++; while (true) { if (*percent_ptr == 'd') { - char * basename_instance = util_alloc_sprintf(basename_fmt, 0); + char * basename_instance = util_alloc_sprintf(eclbasename_fmt, 0); valid = ecl_util_valid_basename(basename_instance); free(basename_instance); break; @@ -1393,7 +1414,9 @@ bool ecl_util_valid_basename_fmt(const char * basename_fmt) percent_ptr++; } } else - valid = ecl_util_valid_basename(basename_fmt); + valid = ecl_util_valid_basename(eclbasename_fmt); + + free(eclbasename_fmt); return valid; } diff --git a/ThirdParty/Ert/devel/libecl/src/fault_block.c b/ThirdParty/Ert/devel/libecl/src/fault_block.c new file mode 100644 index 0000000000..8691e323f7 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/src/fault_block.c @@ -0,0 +1,267 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'fault_block.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include + +#include + +#include +#include +#include +#include + +#define FAULT_BLOCK_ID 3297376 + + +struct fault_block_struct { + UTIL_TYPE_ID_DECLARATION; + const ecl_grid_type * grid; + const fault_block_layer_type * parent_layer; + int_vector_type * i_list; + int_vector_type * j_list; + int_vector_type * global_index_list; + int_vector_type * region_list; + int block_id; + int k; + double xc,yc; + bool valid_center; +}; + + +UTIL_IS_INSTANCE_FUNCTION( fault_block , FAULT_BLOCK_ID ) +static UTIL_SAFE_CAST_FUNCTION( fault_block , FAULT_BLOCK_ID ) + + +static fault_block_type * fault_block_alloc( const fault_block_layer_type * parent_layer , int block_id ) { + fault_block_type * block = util_malloc( sizeof * block ); + UTIL_TYPE_ID_INIT( block , FAULT_BLOCK_ID ); + block->parent_layer = parent_layer; + block->grid = fault_block_layer_get_grid( parent_layer ); + block->k = fault_block_layer_get_k( parent_layer ); + block->block_id = block_id; + + block->i_list = int_vector_alloc(0,0); + block->j_list = int_vector_alloc(0,0); + block->global_index_list = int_vector_alloc(0,0); + block->region_list = int_vector_alloc(0,0); + block->valid_center = false; + return block; +} + + +int fault_block_get_size( const fault_block_type * block ) { + return int_vector_size( block->i_list ); +} + + +int fault_block_get_id( const fault_block_type * block ) { + return block->block_id; +} + + +static void fault_block_free( fault_block_type * block ) { + int_vector_free( block->i_list ); + int_vector_free( block->j_list ); + int_vector_free( block->region_list ); + int_vector_free( block->global_index_list ); + free( block ); +} + + +void fault_block_free__( void * arg) { + fault_block_type * block = fault_block_safe_cast( arg ); + fault_block_free( block ); +} + + +void fault_block_add_cell( fault_block_type * fault_block , int i , int j) { + int_vector_append( fault_block->i_list , i); + int_vector_append( fault_block->j_list , j); + int_vector_append( fault_block->global_index_list , ecl_grid_get_global_index3( fault_block->grid , i , j , fault_block->k)); + fault_block->valid_center = false; + layer_iset_cell_value( fault_block_layer_get_layer( fault_block->parent_layer ) , i , j , fault_block->block_id ); +} + + +void fault_block_assign_to_region( fault_block_type * fault_block , int region_id ) { + if (int_vector_size( fault_block->region_list ) == 0) + int_vector_append( fault_block->region_list , region_id ); + else { + if (int_vector_index_sorted( fault_block->region_list , region_id ) == -1) + int_vector_append( fault_block->region_list , region_id ); + } + int_vector_sort( fault_block->region_list ); +} + + +const int_vector_type * fault_block_get_region_list( const fault_block_type * fault_block ) { + return fault_block->region_list; +} + + +static void fault_block_assert_center( fault_block_type * fault_block ) { + if (!fault_block->valid_center) { + int index; + double xc = 0; + double yc = 0; + + for (index = 0; index < int_vector_size( fault_block->i_list ); index++) { + int i = int_vector_iget( fault_block->i_list , index); + int j = int_vector_iget( fault_block->j_list , index); + int g = ecl_grid_get_global_index3( fault_block->grid , i , j , fault_block->k ); + double x , y , z; + + ecl_grid_get_xyz1( fault_block->grid , g , &x , &y , &z); + xc += x; + yc += y; + } + + fault_block->xc = xc / int_vector_size( fault_block->i_list ); + fault_block->yc = yc / int_vector_size( fault_block->i_list ); + } + fault_block->valid_center = true; +} + + +double fault_block_get_xc( fault_block_type * fault_block ) { + fault_block_assert_center( fault_block ); + return fault_block->xc; +} + + +double fault_block_get_yc( fault_block_type * fault_block ) { + fault_block_assert_center( fault_block ); + return fault_block->yc; +} + + + + +void fault_block_export_cell(const fault_block_type * fault_block , int index , int * i , int * j , int * k , double * x, double * y, double * z) { + *i = int_vector_iget( fault_block->i_list , index ); + *j = int_vector_iget( fault_block->j_list , index ); + *k = fault_block->k; + + ecl_grid_get_xyz3( fault_block->grid , *i , *j , *k , x , y , z); +} + + +int fault_block_iget_i(const fault_block_type * fault_block , int index) { + return int_vector_iget( fault_block->i_list , index ); +} + + +int fault_block_iget_j(const fault_block_type * fault_block , int index) { + return int_vector_iget( fault_block->j_list , index ); +} + +const int_vector_type * fault_block_get_global_index_list( const fault_block_type * fault_block) { + return fault_block->global_index_list; +} + + + +bool fault_block_trace_edge( const fault_block_type * block , double_vector_type * x_list , double_vector_type * y_list, int_vector_type * cell_list) { + if (fault_block_get_size( block ) > 0) { + struct_vector_type * corner_list = struct_vector_alloc( sizeof(int_point2d_type) ); + int c; + { + int start_i = fault_block_iget_i( block , 0 ); + int start_j = fault_block_iget_j( block , 0 ); + + layer_trace_block_edge(fault_block_layer_get_layer( block->parent_layer ) , start_i , start_j , block->block_id , corner_list , cell_list); + } + + double_vector_reset( x_list ); + double_vector_reset( y_list ); + for (c=0; c < struct_vector_get_size( corner_list ); c++) { + double x,y,z; + int_point2d_type ij; + struct_vector_iget( corner_list , c , &ij ); + + ecl_grid_get_corner_xyz( block->grid , ij.i , ij.j , block->k , &x , &y , &z); + double_vector_append( x_list , x); + double_vector_append( y_list , y); + } + + struct_vector_free( corner_list ); + return true; + } else + return false; +} + + + +void fault_block_list_neighbours( const fault_block_type * block, int_vector_type * neighbour_list) { + int_vector_reset( neighbour_list ); + { + int_vector_type * cell_list = int_vector_alloc(0,0); + double_vector_type * x_list = double_vector_alloc(0,0); + double_vector_type * y_list = double_vector_alloc(0,0); + + fault_block_trace_edge( block , x_list , y_list , cell_list ); + { + int c; + layer_type * layer = fault_block_layer_get_layer( block->parent_layer ); + for (c = 0; c < int_vector_size( cell_list ); c++) { + int j = int_vector_iget( cell_list , c) / layer_get_nx(layer); + int i = int_vector_iget( cell_list , c) % layer_get_nx(layer); + + if (i > 0) { + int neighbour_id = layer_iget_cell_value(layer , i - 1, j); + int_vector_append( neighbour_list , neighbour_id ); + } + + if (i < (layer_get_nx( layer) - 1)) { + int neighbour_id = layer_iget_cell_value(layer , i + 1, j); + int_vector_append( neighbour_list , neighbour_id ); + } + + if (j > 0) { + int neighbour_id = layer_iget_cell_value(layer , i, j - 1); + int_vector_append( neighbour_list , neighbour_id ); + } + + if (j < (layer_get_ny( layer) - 1)) { + int neighbour_id = layer_iget_cell_value(layer , i, j + 1); + int_vector_append( neighbour_list , neighbour_id ); + } + } + } + + + double_vector_free( x_list ); + double_vector_free( y_list ); + int_vector_free( cell_list ); + } + int_vector_select_unique( neighbour_list ); + int_vector_del_value( neighbour_list , 0 ); + int_vector_del_value( neighbour_list , block->block_id ); +} + + + +void fault_block_copy_content(fault_block_type * target_block , const fault_block_type * src_block ) { + int b; + for (b = 0; b < int_vector_size( src_block->i_list ); b++) + fault_block_add_cell( target_block , int_vector_iget( src_block->i_list , b) , int_vector_iget( src_block->j_list , b)); + +} + + diff --git a/ThirdParty/Ert/devel/libecl/src/fault_block_layer.c b/ThirdParty/Ert/devel/libecl/src/fault_block_layer.c new file mode 100644 index 0000000000..22811d23cd --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/src/fault_block_layer.c @@ -0,0 +1,342 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'fault_block_layer.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include + +#include +#include +#include +#include + +#define FAULT_BLOCK_LAYER_ID 2297476 + + +/* + The fault_block object is implemented as a separate object type in + the fault_block.c file; however the fault blocks should be closely + linked to the layer object in the fault_block_layer structure - it + is therefor not possible/legal to create a fault block instance by + itself. To support that encapsulation the fault_block.c file is + included here, and the functions: + + fault_block_alloc(); + fault_block_free(); + + Which must be called through the fault_block_layer class are made + static. +*/ + +static fault_block_type * fault_block_alloc( const fault_block_layer_type * parent_layer , int block_id ); +static void fault_block_free( fault_block_type * block ); + +#include "fault_block.c" + + +struct fault_block_layer_struct { + UTIL_TYPE_ID_DECLARATION; + const ecl_grid_type * grid; + int_vector_type * block_map; + layer_type * layer; + int k; + vector_type * blocks; +}; + + +UTIL_IS_INSTANCE_FUNCTION(fault_block_layer , FAULT_BLOCK_LAYER_ID); +static UTIL_SAFE_CAST_FUNCTION(fault_block_layer , FAULT_BLOCK_LAYER_ID); + + +fault_block_type * fault_block_layer_add_block( fault_block_layer_type * layer , int block_id) { + if (int_vector_safe_iget( layer->block_map , block_id) < 0) { + fault_block_type * block = fault_block_alloc( layer , block_id ); + int storage_index = vector_get_size( layer->blocks ); + + int_vector_iset( layer->block_map , block_id , storage_index ); + vector_append_owned_ref( layer->blocks , block , fault_block_free__ ); + + return block; + } else + return NULL; +} + + + + + +void fault_block_layer_scan_layer( fault_block_layer_type * fault_layer , layer_type * layer) { + int i,j; + int_vector_type * i_list = int_vector_alloc(0,0); + int_vector_type * j_list = int_vector_alloc(0,0); + + for (j = 0; j < layer_get_ny( layer ); j++) { + for (i = 0; i < layer_get_nx( layer); i++) { + int cell_value = layer_iget_cell_value( layer , i , j ); + if (cell_value != 0) { + layer_trace_block_content( layer , true , i , j , cell_value , i_list , j_list ); + { + int c; + int block_id = fault_block_layer_get_next_id( fault_layer ); + fault_block_type * fault_block = fault_block_layer_add_block( fault_layer , block_id ); + for (c=0; c < int_vector_size( i_list ); c++) + fault_block_add_cell( fault_block , int_vector_iget( i_list , c ), int_vector_iget( j_list , c )); + + } + } + } + } + + int_vector_free( i_list ); + int_vector_free( j_list ); +} + + +/* + Observe that the id values from the ecl_kw instance are not + retained; the fault_block_layer instance gets new block id numbers, + including a nonzero value for the cells which have value zero in the + keyword. + + + - The blocks in the fault_block_layer instance are guaranteed to be + singly connected. + + - Observe that the numbering of the blocks is implicitly given by + the spatial distribution of the values, and hence *completely + random* with respect to the original values in the keyword. + +*/ + + +bool fault_block_layer_scan_kw( fault_block_layer_type * layer , const ecl_kw_type * fault_block_kw) { + bool assign_zero = true; + + if (ecl_kw_get_size( fault_block_kw) != ecl_grid_get_global_size(layer->grid)) + return false; + else if (ecl_kw_get_type( fault_block_kw ) != ECL_INT_TYPE) + return false; + else { + int i,j; + int max_block_id = 0; + layer_type * work_layer = layer_alloc( ecl_grid_get_nx( layer->grid ) , ecl_grid_get_ny( layer->grid )); + + for (j=0; j < ecl_grid_get_ny( layer->grid ); j++) { + for (i=0; i < ecl_grid_get_nx( layer->grid ); i++) { + int g = ecl_grid_get_global_index3( layer->grid , i , j , layer->k ); + int block_id = ecl_kw_iget_int( fault_block_kw , g ); + + + if (block_id > 0) { + layer_iset_cell_value( work_layer , i , j , block_id ); + max_block_id = util_int_max( block_id , max_block_id ); + } + } + } + + if (assign_zero) + layer_replace_cell_values( work_layer , 0 , max_block_id + 1); + + fault_block_layer_scan_layer( layer , work_layer ); + layer_free( work_layer ); + return true; + } +} + + + +/** + This function will just load the fault block distribution from + fault_block_kw; it will not do any reordering or assign block ids + to the regions with ID == 0. +*/ + + +bool fault_block_layer_load_kw( fault_block_layer_type * layer , const ecl_kw_type * fault_block_kw) { + if (ecl_kw_get_size( fault_block_kw) != ecl_grid_get_global_size(layer->grid)) + return false; + else if (ecl_kw_get_type( fault_block_kw ) != ECL_INT_TYPE) + return false; + else { + int i,j; + + for (j=0; j < ecl_grid_get_ny( layer->grid ); j++) { + for (i=0; i < ecl_grid_get_nx( layer->grid ); i++) { + int g = ecl_grid_get_global_index3( layer->grid , i , j , layer->k ); + int block_id = ecl_kw_iget_int( fault_block_kw , g ); + if (block_id > 0) { + fault_block_layer_add_block( layer , block_id ); + { + fault_block_type * fault_block = fault_block_layer_get_block( layer , block_id ); + fault_block_add_cell( fault_block , i,j ); + } + } + } + } + + return true; + } +} + + + + + + +fault_block_layer_type * fault_block_layer_alloc( const ecl_grid_type * grid , int k) { + if ((k < 0) || (k >= ecl_grid_get_nz( grid ))) + return NULL; + else { + fault_block_layer_type * layer = util_malloc( sizeof * layer ); + UTIL_TYPE_ID_INIT( layer , FAULT_BLOCK_LAYER_ID); + layer->grid = grid; + layer->k = k; + layer->block_map = int_vector_alloc( 0 , -1); + layer->blocks = vector_alloc_new(); + layer->layer = layer_alloc(ecl_grid_get_nx(grid) , ecl_grid_get_ny(grid)); + + return layer; + } +} + + +fault_block_type * fault_block_layer_iget_block( const fault_block_layer_type * layer , int storage_index) { + return vector_iget( layer->blocks , storage_index ); +} + + +fault_block_type * fault_block_layer_get_block( const fault_block_layer_type * layer , int block_id) { + int storage_index = int_vector_safe_iget( layer->block_map , block_id); + if (storage_index < 0) + return NULL; + else + return vector_iget( layer->blocks , storage_index ); +} + + +fault_block_type * fault_block_layer_safe_get_block( fault_block_layer_type * layer , int block_id) { + int storage_index = int_vector_safe_iget( layer->block_map , block_id); + if (storage_index < 0) + return fault_block_layer_add_block( layer , block_id ); + else + return vector_iget( layer->blocks , storage_index ); +} + + + +void fault_block_layer_del_block( fault_block_layer_type * layer , int block_id) { + int storage_index = int_vector_safe_iget( layer->block_map , block_id); + if (storage_index >= 0) { + + int_vector_iset( layer->block_map , block_id , -1 ); + vector_idel( layer->blocks , storage_index ); + { + int index; + + for (index = 0; index < int_vector_size( layer->block_map ); index++) { + int current_storage_index = int_vector_iget( layer->block_map , index ); + if (current_storage_index > storage_index) + int_vector_iset( layer->block_map ,index , current_storage_index - 1); + } + } + } +} + + + + + + +bool fault_block_layer_has_block( const fault_block_layer_type * layer , int block_id) { + if (int_vector_safe_iget( layer->block_map , block_id) >= 0) + return true; + else + return false; +} + + +int fault_block_layer_get_max_id( const fault_block_layer_type * layer ) { + return int_vector_size( layer->block_map ) - 1; +} + +int fault_block_layer_get_next_id( const fault_block_layer_type * layer ) { + if (int_vector_size( layer->block_map ) == 0) + return 1; + else + return int_vector_size( layer->block_map ); +} + +int fault_block_layer_get_size( const fault_block_layer_type * layer ) { + return vector_get_size( layer->blocks ); +} + + +int fault_block_layer_get_k( const fault_block_layer_type * layer ) { + return layer->k; +} + + + +void fault_block_layer_free( fault_block_layer_type * layer ) { + int_vector_free( layer->block_map ); + vector_free( layer->blocks ); + layer_free( layer->layer ); + free(layer); +} + + +void fault_block_layer_free__( void * arg ) { + fault_block_layer_type * layer = fault_block_layer_safe_cast( arg ); + fault_block_layer_free( layer ); +} + + +void fault_block_layer_insert_block_content( fault_block_layer_type * layer , const fault_block_type * src_block) { + int next_block_id = fault_block_layer_get_next_id( layer ); + fault_block_type * target_block = fault_block_layer_add_block( layer , next_block_id ); + fault_block_copy_content( target_block , src_block ); +} + + + +bool fault_block_layer_export( const fault_block_layer_type * layer , ecl_kw_type * faultblock_kw) { + if ((ecl_kw_get_type( faultblock_kw ) == ECL_INT_TYPE) && (ecl_kw_get_size( faultblock_kw ) == ecl_grid_get_global_size( layer->grid ))) { + int i,j; + + for (j=0; j < ecl_grid_get_ny( layer->grid ); j++) { + for (i=0; i < ecl_grid_get_nx( layer->grid ); i++) { + int g = ecl_grid_get_global_index3( layer->grid , i, j , layer->k ); + int cell_value = layer_iget_cell_value( layer->layer , i , j ); + ecl_kw_iset_int( faultblock_kw , g , cell_value); + } + } + return true; + } else + return false; +} + + +const ecl_grid_type * fault_block_layer_get_grid( const fault_block_layer_type * layer ) { + return layer->grid; +} + + +layer_type * fault_block_layer_get_layer( const fault_block_layer_type * layer ) { + return layer->layer; +} diff --git a/ThirdParty/Ert/devel/libecl/src/fortio.c b/ThirdParty/Ert/devel/libecl/src/fortio.c index 401e393dd7..48dcfb0d6b 100644 --- a/ThirdParty/Ert/devel/libecl/src/fortio.c +++ b/ThirdParty/Ert/devel/libecl/src/fortio.c @@ -23,9 +23,13 @@ #include #include +#include #include + +#define FORTIO_ID 345116 + extern int errno; /** @@ -69,6 +73,7 @@ fwrite() from the standard library. struct fortio_struct { + UTIL_TYPE_ID_DECLARATION; FILE * stream; char * filename; bool endian_flip_header; @@ -82,9 +87,12 @@ struct fortio_struct { }; +UTIL_IS_INSTANCE_FUNCTION( fortio , FORTIO_ID ); +UTIL_SAFE_CAST_FUNCTION( fortio, FORTIO_ID ); static fortio_type * fortio_alloc__(const char *filename , bool fmt_file , bool endian_flip_header , bool stream_owner) { fortio_type * fortio = util_malloc(sizeof * fortio ); + UTIL_TYPE_ID_INIT( fortio, FORTIO_ID ); fortio->filename = util_alloc_string_copy(filename); fortio->endian_flip_header = endian_flip_header; fortio->active_header = 0; @@ -469,8 +477,29 @@ int fortio_init_read(fortio_type *fortio) { } +void fortio_data_fskip(fortio_type* fortio, const int element_size, const int element_count, const int block_count) { + int headers = block_count * 4; + int trailers = block_count * 4; + int bytes_to_skip = headers + trailers + (element_size * element_count); + + fortio_fseek(fortio, bytes_to_skip, SEEK_CUR); +} +void fortio_data_fseek(fortio_type* fortio, offset_type data_offset, size_t data_element, const int element_size, const int element_count, const int block_size) { + if(data_element < 0 || data_element >= element_count) { + util_abort("%s: Element index is out of range: 0 <= %d < %d \n", __func__, data_element, element_count); + } + { + int block_index = data_element / block_size; + int headers = (block_index + 1) * 4; + int trailers = block_index * 4; + int bytes_to_skip = data_offset + headers + trailers + (data_element * element_size); + + fortio_fseek(fortio, bytes_to_skip, SEEK_SET); + } +} + void fortio_complete_read(fortio_type *fortio) { int trailer; @@ -578,7 +607,7 @@ void fortio_init_write(fortio_type *fortio , int record_size) { file_header = fortio->active_header; if (fortio->endian_flip_header) util_endian_flip_vector(&file_header , sizeof file_header , 1); - + util_fwrite_int( file_header , fortio->stream ); fortio->rec_nr++; } diff --git a/ThirdParty/Ert/devel/libecl/src/layer.c b/ThirdParty/Ert/devel/libecl/src/layer.c new file mode 100644 index 0000000000..4e9f8f66aa --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/src/layer.c @@ -0,0 +1,521 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'layer.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include +#include + +#include + +#define LAYER_TYPE_ID 55185409 + + + +typedef struct { + int cell_value; + int edges[4]; +} cell_type; + + +struct layer_struct { + UTIL_TYPE_ID_DECLARATION; + int nx, ny; + cell_type * data; + int cell_sum; +}; + + +UTIL_IS_INSTANCE_FUNCTION( layer , LAYER_TYPE_ID ) +UTIL_SAFE_CAST_FUNCTION( layer , LAYER_TYPE_ID ) + + +layer_type * layer_alloc(int nx , int ny) { + layer_type * layer = util_malloc( sizeof * layer ); + UTIL_TYPE_ID_INIT( layer , LAYER_TYPE_ID ); + layer->nx = nx; + layer->ny = ny; + layer->cell_sum = 0; + layer->data = util_malloc( (layer->nx + 1)* (layer->ny + 1) * sizeof * layer->data ); + { + int g; + for (g=0; g < (layer->nx + 1)*(layer->ny + 1); g++) { + cell_type * cell = &layer->data[g]; + cell->cell_value = 0; + cell->edges[RIGHT_EDGE] = 0; + cell->edges[LEFT_EDGE] = 0; + cell->edges[TOP_EDGE] = 0; + cell->edges[BOTTOM_EDGE] = 0; + } + } + + return layer; +} + + + + +void layer_free( layer_type * layer ) { + free( layer->data ); + free(layer); +} + +static int layer_get_global_cell_index( const layer_type * layer , int i , int j) { + if ((i < 0) || (i >= layer->nx)) + util_abort("%s: invalid i value:%d Valid range: [0,%d) \n",__func__ , i , layer->nx); + + if ((j < 0) || (j >= layer->ny)) + util_abort("%s: invalid j value:%d Valid range: [0,%d) \n",__func__ , j , layer->ny); + + return i + j*(layer->nx + 1); +} + + + +int layer_iget_cell_value( const layer_type * layer, int i , int j) { + int g = layer_get_global_cell_index( layer , i , j ); + return layer->data[g].cell_value; +} + + +int layer_get_cell_sum( const layer_type * layer ) { + return layer->cell_sum; +} + + +static void layer_cancel_edge( layer_type * layer , int i , int j , edge_dir_enum dir) { + int g = layer_get_global_cell_index( layer , i , j ); + cell_type * cell = &layer->data[g]; + cell->edges[dir] = 0; +} + + +int layer_get_nx( const layer_type * layer ) { + return layer->nx; +} + +int layer_get_ny( const layer_type * layer ) { + return layer->ny; +} + +void layer_iset_cell_value( layer_type * layer , int i , int j , int value) { + int g = layer_get_global_cell_index( layer , i , j ); + cell_type * cell = &layer->data[g]; + + layer->cell_sum += (value - cell->cell_value); + cell->cell_value = value; + + + if (i > 0) { + int neighbour_value = layer_iget_cell_value( layer , i - 1 , j); + if (value == neighbour_value) { + cell->edges[LEFT_EDGE] = 0; + layer_cancel_edge( layer , i - 1, j , RIGHT_EDGE); + } else + cell->edges[LEFT_EDGE] = -value; + } else + cell->edges[LEFT_EDGE] = -value; + + + if (i < (layer->nx - 1)) { + int neighbour_value = layer_iget_cell_value( layer , i + 1 , j); + if (value == neighbour_value) { + cell->edges[RIGHT_EDGE] = 0; + layer_cancel_edge( layer , i + 1, j , LEFT_EDGE); + } else + cell->edges[RIGHT_EDGE] = value; + } else + cell->edges[RIGHT_EDGE] = value; + + + if (j < (layer->ny - 1)) { + int neighbour_value = layer_iget_cell_value( layer , i , j + 1); + if (value == neighbour_value) { + cell->edges[TOP_EDGE] = 0; + layer_cancel_edge( layer , i , j + 1, BOTTOM_EDGE); + } else + cell->edges[TOP_EDGE] = -value; + } else + cell->edges[TOP_EDGE] = -value; + + + if (j > 0) { + int neighbour_value = layer_iget_cell_value( layer , i , j - 1); + if (value == neighbour_value) { + cell->edges[BOTTOM_EDGE] = 0; + layer_cancel_edge( layer , i , j - 1, TOP_EDGE); + } else + cell->edges[BOTTOM_EDGE] = value; + } else + cell->edges[BOTTOM_EDGE] = value; + +} + + +static int layer_get_global_edge_index( const layer_type * layer , int i , int j , edge_dir_enum dir) { + if ((i < 0) || (j < 0)) + util_abort("%s: invalid value for i,j \n",__func__); + + if ((i > layer->nx) || (j > layer->ny)) + util_abort("%s: invalid value for i,j \n",__func__); + + if (i == layer->nx) { + if (j == layer->ny) + util_abort("%s: invalid value for i,j \n",__func__); + + if (dir != LEFT_EDGE) + util_abort("%s: invalid value for i,j \n",__func__); + } + + + if (j == layer->ny) { + if (i == layer->nx) + util_abort("%s: invalid value for i,j \n",__func__); + + if (dir != BOTTOM_EDGE) + util_abort("%s: invalid value for i,j \n",__func__); + } + + return i + j*(layer->nx + 1); +} + + + +int layer_iget_edge_value( const layer_type * layer , int i , int j , edge_dir_enum dir) { + int g = layer_get_global_edge_index( layer , i , j , dir); + cell_type * cell = &layer->data[g]; + return cell->edges[dir]; +} + + +bool layer_cell_on_edge( const layer_type * layer , int i , int j) { + int g = layer_get_global_cell_index( layer , i , j); + cell_type * cell = &layer->data[g]; + + if (cell->cell_value == cell->edges[LEFT_EDGE]) + return true; + if (cell->cell_value == cell->edges[RIGHT_EDGE]) + return true; + if (cell->cell_value == cell->edges[BOTTOM_EDGE]) + return true; + if (cell->cell_value == cell->edges[TOP_EDGE]) + return true; + + return false; +} + + +static void point_shift(int_point2d_type * point , int di , int dj) { + point->i += di; + point->j += dj; +} + +static bool point_equal(int_point2d_type * p1 , int_point2d_type *p2) { + if ((p1->i == p2->i) && (p1->j == p2->j)) + return true; + else + return false; +} + + +/* + Possible edge transitions: + + BOTTOM_EDGE -> BOTTOM_EDGE{ i + 1, j } , RIGHT_EDGE{i,j} , LEFT_EDGE{i +1,j -1} + RIGHT_EDGE -> TOP_EDGE{i,j} , RIGHT_EDGE{i,j+1} , BOTTOM_EDGE{i+1 , j+1} + TOP_EDGE -> LEFT_EDGE{i,j} , TOP_EDGE{i-1,j} , RIGHT_EDGE{i-1,j+1} + LEFT_EDGE -> BOTTOM_EDGE{i,j} , LEFT_EDGE{i,j-1} , TOP_EDGE{i-1 , j-1} + + + +*/ + +static void layer_trace_block_edge__( const layer_type * layer , int_point2d_type start_point , int i , int j , int value , edge_dir_enum dir , struct_vector_type * corner_list, int_vector_type * cell_list) { + int_point2d_type current_point; + int_point2d_type next_point; + current_point.i = i; + current_point.j = j; + next_point = current_point; + + if (dir == BOTTOM_EDGE) + point_shift( &next_point , 1 , 0 ); + else if (dir == RIGHT_EDGE) { + point_shift( ¤t_point , 1 , 0 ); + point_shift( &next_point , 1 , 1 ); + } else if (dir == TOP_EDGE) { + point_shift( ¤t_point , 1 , 1 ); + point_shift( &next_point , 0 , 1 ); + } else if (dir == LEFT_EDGE) + point_shift( ¤t_point , 0 , 1 ); + + struct_vector_append( corner_list , ¤t_point ); + { + int cell_index = i + j*layer->nx; + int_vector_append( cell_list , cell_index ); + } + + if ( !point_equal(&start_point , &next_point) ) { + + if (dir == BOTTOM_EDGE) { + if (layer_iget_edge_value( layer , i,j,RIGHT_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i , j , value , RIGHT_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i + 1 , j ,BOTTOM_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i + 1 , j , value , BOTTOM_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i + 1 , j - 1 , LEFT_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i + 1 , j -1 , value , LEFT_EDGE , corner_list , cell_list); + else + util_abort("%s: dir == BOTTOM_EDGE \n",__func__); + } + + + if (dir == RIGHT_EDGE) { + if (layer_iget_edge_value( layer , i,j,TOP_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i , j , value , TOP_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i , j + 1 ,RIGHT_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i , j + 1, value , RIGHT_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i + 1 , j + 1 ,BOTTOM_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i + 1 , j + 1, value , BOTTOM_EDGE , corner_list , cell_list); + else + util_abort("%s: dir == RIGHT_EDGE \n",__func__); + } + + + if (dir == TOP_EDGE) { + if (layer_iget_edge_value( layer , i , j , LEFT_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i , j , value , LEFT_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i - 1 , j ,TOP_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i - 1 , j , value , TOP_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i - 1 , j + 1 ,RIGHT_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i - 1 , j + 1, value , RIGHT_EDGE , corner_list , cell_list); + else + util_abort("%s: dir == TOP_EDGE \n",__func__); + } + + + if (dir == LEFT_EDGE) { + if (layer_iget_edge_value( layer , i , j , BOTTOM_EDGE) == value) + layer_trace_block_edge__( layer , start_point , i , j , value , BOTTOM_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i , j - 1 , LEFT_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i , j - 1, value , LEFT_EDGE , corner_list , cell_list); + else if (layer_iget_edge_value( layer , i -1 , j - 1 , TOP_EDGE) == -value) + layer_trace_block_edge__( layer , start_point , i-1 , j - 1, value , TOP_EDGE , corner_list , cell_list); + else + util_abort("%s: dir == LEFT_EDGE \n",__func__); + } + + } +} + + + +static void layer_fprintf_dash( const layer_type * layer , FILE * stream, int i1 , int i2) { + int i; + fprintf(stream," --"); + for (i=i1; i <= i2; i++) + fprintf(stream , "----"); + fprintf(stream , "----\n"); +} + + +static void layer_fprintf_header( const layer_type * layer , FILE * stream, int i1 , int i2) { + int i; + fprintf(stream," "); + for (i=i1; i <= i2; i++) + fprintf(stream , " %3d" , i); + fprintf(stream , "\n"); +} + + +void layer_fprintf_box( const layer_type * layer , FILE * stream , int i1 , int i2 , int j1 , int j2) { + int i,j; + layer_fprintf_header( layer , stream , i1 , i2); + layer_fprintf_dash( layer , stream , i1 , i2); + + + for (j=j2; j >= j1; j--) { + fprintf(stream , " %3d | " , j); + for (i=i1; i <= i2; i++) { + int g = layer_get_global_cell_index( layer , i , j); + cell_type * cell = &layer->data[g]; + fprintf(stream , " %3d" , cell->cell_value); + } + fprintf(stream , " | %3d \n" , j); + } + + layer_fprintf_dash( layer , stream , i1 , i2); + layer_fprintf_header( layer , stream , i1 , i2); +} + + +void layer_fprintf( const layer_type * layer , FILE * stream) { + layer_fprintf_box( layer , stream , 0 , layer->nx - 1 , 0 , layer->ny - 1); +} + + +void layer_fprintf_cell( const layer_type * layer , int i , int j , FILE * stream) { + int g = layer_get_global_cell_index( layer , i , j); + cell_type * cell = &layer->data[g]; + + fprintf(stream , " i:%d j:%d \n",i,j); + fprintf(stream , " *--- %4d ---* \n",cell->edges[TOP_EDGE]); + fprintf(stream , " | | \n"); + fprintf(stream , " %4d %4d %4d\n" , cell->edges[LEFT_EDGE] , cell->cell_value , cell->edges[RIGHT_EDGE]); + fprintf(stream , " | | \n"); + fprintf(stream , " *--- %4d ---* \n",cell->edges[BOTTOM_EDGE]); +} + + +static bool layer_find_edge( const layer_type * layer , int *i , int *j , int value) { + int g = layer_get_global_cell_index( layer , *i , *j); + cell_type * cell = &layer->data[g]; + if (cell->cell_value == value) { + + while (!layer_cell_on_edge( layer , *i , *j)) + (*i) += 1; + + return true; + } else + return false; +} + + +bool layer_trace_block_edge( const layer_type * layer , int start_i , int start_j , int value , struct_vector_type * corner_list , int_vector_type * cell_list) { + int g = layer_get_global_cell_index( layer , start_i , start_j); + cell_type * cell = &layer->data[g]; + if ((cell->cell_value == value)) { + int i = start_i; + int j = start_j; + + if (layer_find_edge( layer , &i , &j , value)) { + int_point2d_type start_corner; + + g = layer_get_global_cell_index( layer , i , j); + cell = &layer->data[g]; + + start_corner.i = i; + start_corner.j = j; + struct_vector_reset( corner_list ); + int_vector_reset( cell_list ); + + + if (cell->edges[BOTTOM_EDGE] == value) { + point_shift( &start_corner , 0 , 0 ); + layer_trace_block_edge__(layer , start_corner , i , j , value , BOTTOM_EDGE , corner_list , cell_list); + } else if (cell->edges[RIGHT_EDGE] == value) { + point_shift( &start_corner , 1 , 0 ); + layer_trace_block_edge__(layer , start_corner , i , j , value , RIGHT_EDGE , corner_list , cell_list); + } else if (cell->edges[TOP_EDGE] == -value) { + point_shift( &start_corner , 1 , 1 ); + layer_trace_block_edge__(layer , start_corner , i , j , value , TOP_EDGE , corner_list , cell_list); + } else if (cell->edges[LEFT_EDGE] == -value) { + point_shift( &start_corner , 0 , 1 ); + layer_trace_block_edge__(layer , start_corner , i , j , value , LEFT_EDGE , corner_list , cell_list); + } else + util_abort("%s: what the fuck - internal error \n",__func__); + + int_vector_select_unique( cell_list ); + return true; + } + } + + return false; +} + + + +static void layer_trace_block_content__( layer_type * layer , bool erase , int i , int j , int value , bool * visited , int_vector_type * i_list , int_vector_type * j_list) { + int g = layer_get_global_cell_index( layer , i , j); + cell_type * cell = &layer->data[g]; + if (cell->cell_value != value || visited[g]) + return; + { + visited[g] = true; + if (erase) + layer_iset_cell_value( layer , i , j , 0); + + int_vector_append( i_list , i ); + int_vector_append( j_list , j ); + + if (i > 0) + layer_trace_block_content__( layer , erase , i - 1 , j , value , visited , i_list , j_list); + + if (i < (layer->nx - 1)) + layer_trace_block_content__( layer , erase , i + 1 , j , value , visited , i_list , j_list); + + if (j > 0) + layer_trace_block_content__( layer , erase , i , j - 1, value , visited , i_list , j_list); + + if (j < (layer->ny - 1)) + layer_trace_block_content__( layer , erase , i , j + 1, value , visited , i_list , j_list); + + } +} + + +static bool * layer_alloc_visited_mask( const layer_type * layer ) { + int total_size = (layer->nx + 1)* (layer->ny + 1); + bool * visited = util_malloc( total_size * sizeof * visited ); + int g; + for (g = 0; g < total_size; g++) + visited[g] = false; + + return visited; +} + + + + +bool layer_trace_block_content( layer_type * layer , bool erase , int start_i , int start_j , int value , int_vector_type * i_list, int_vector_type * j_list) { + bool start_tracing = false; + int g = layer_get_global_cell_index( layer , start_i , start_j); + cell_type * cell = &layer->data[g]; + + if ((value == 0) && (cell->cell_value != 0)) + start_tracing = true; + else if ((cell->cell_value == value) && (cell->cell_value != 0)) + start_tracing = true; + + if (start_tracing) { + bool * visited = layer_alloc_visited_mask( layer ); + + value = cell->cell_value; + int_vector_reset( i_list ); + int_vector_reset( j_list ); + layer_trace_block_content__(layer , erase , start_i , start_j , value , visited , i_list , j_list ); + + free( visited ); + return true; + } else + return false; +} + + +int layer_replace_cell_values( layer_type * layer , int old_value , int new_value) { + int i,j; + int replace_count = 0; + + for (j=0; j < layer->ny; j++) { + for (i=0; i < layer->nx; i++) { + if (layer_iget_cell_value( layer , i , j ) == old_value) { + layer_iset_cell_value( layer , i , j , new_value); + replace_count++; + } + } + } + + return replace_count; +} diff --git a/ThirdParty/Ert/devel/libecl/src/nnc_info.c b/ThirdParty/Ert/devel/libecl/src/nnc_info.c index b25c9b8ada..a60e1f4c9e 100644 --- a/ThirdParty/Ert/devel/libecl/src/nnc_info.c +++ b/ThirdParty/Ert/devel/libecl/src/nnc_info.c @@ -36,7 +36,7 @@ struct nnc_info_struct { int lgr_nr; /* The lgr_nr of the cell holding this nnc_info structure. */ }; - +static void nnc_info_add_vector( nnc_info_type * nnc_info , nnc_vector_type * nnc_vector); UTIL_IS_INSTANCE_FUNCTION( nnc_info , NNC_INFO_TYPE_ID ) @@ -49,6 +49,58 @@ nnc_info_type * nnc_info_alloc(int lgr_nr) { return nnc_info; } + + +nnc_info_type * nnc_info_alloc_copy( const nnc_info_type * src_info ) { + nnc_info_type * copy_info = nnc_info_alloc( src_info->lgr_nr ); + int ivec; + + for (ivec = 0; ivec < vector_get_size( src_info->lgr_list ); ivec++) { + nnc_vector_type * copy_vector = nnc_vector_alloc_copy( vector_iget_const( src_info->lgr_list , ivec)); + nnc_info_add_vector( copy_info , copy_vector ); + } + + return copy_info; +} + + +bool nnc_info_equal( const nnc_info_type * nnc_info1 , const nnc_info_type * nnc_info2 ) { + if (nnc_info1 == nnc_info2) + return true; + + if ((nnc_info1 == NULL) || (nnc_info2 == NULL)) + return false; + + { + if (nnc_info1->lgr_nr != nnc_info2->lgr_nr) + return false; + + if ((int_vector_size( nnc_info1->lgr_index_map ) > 0) && (int_vector_size( nnc_info2->lgr_index_map ) > 0)) { + int max_lgr_nr = util_int_max( int_vector_size( nnc_info1->lgr_index_map ), + int_vector_size( nnc_info2->lgr_index_map ) ); + int lgr_nr = 0; + + while (true) { + nnc_vector_type * vector1 = nnc_info_get_vector( nnc_info1 , lgr_nr ); + nnc_vector_type * vector2 = nnc_info_get_vector( nnc_info2 , lgr_nr ); + + if (!nnc_vector_equal(vector1 , vector2)) + return false; + + lgr_nr++; + if (lgr_nr > max_lgr_nr) + return true; + } + } else { + if (int_vector_size( nnc_info1->lgr_index_map ) == int_vector_size( nnc_info2->lgr_index_map )) + return true; + else + return false; + } + } +} + + void nnc_info_free( nnc_info_type * nnc_info ) { vector_free(nnc_info->lgr_list); int_vector_free(nnc_info->lgr_index_map); @@ -73,13 +125,17 @@ nnc_vector_type * nnc_info_get_self_vector( const nnc_info_type * nnc_info ) { return nnc_info_get_vector( nnc_info , nnc_info->lgr_nr ); } +static void nnc_info_add_vector( nnc_info_type * nnc_info , nnc_vector_type * nnc_vector) { + vector_append_owned_ref( nnc_info->lgr_list , nnc_vector , nnc_vector_free__ ); + int_vector_iset( nnc_info->lgr_index_map , nnc_vector_get_lgr_nr( nnc_vector ) , vector_get_size( nnc_info->lgr_list ) - 1 ); +} + static void nnc_info_assert_vector( nnc_info_type * nnc_info , int lgr_nr ) { nnc_vector_type * nnc_vector = nnc_info_get_vector( nnc_info , lgr_nr); if (!nnc_vector) { nnc_vector = nnc_vector_alloc( lgr_nr ); - vector_append_owned_ref( nnc_info->lgr_list , nnc_vector , nnc_vector_free__ ); - int_vector_iset( nnc_info->lgr_index_map , lgr_nr , vector_get_size( nnc_info->lgr_list ) - 1 ); + nnc_info_add_vector( nnc_info , nnc_vector ); } } diff --git a/ThirdParty/Ert/devel/libecl/src/nnc_vector.c b/ThirdParty/Ert/devel/libecl/src/nnc_vector.c index 5a552ad2f9..c8f92e6500 100644 --- a/ThirdParty/Ert/devel/libecl/src/nnc_vector.c +++ b/ThirdParty/Ert/devel/libecl/src/nnc_vector.c @@ -53,6 +53,39 @@ nnc_vector_type * nnc_vector_alloc(int lgr_nr) { return nnc_vector; } +nnc_vector_type * nnc_vector_alloc_copy(const nnc_vector_type * src_vector) { + nnc_vector_type * copy_vector = util_malloc( sizeof * src_vector ); + UTIL_TYPE_ID_INIT(copy_vector , NNC_VECTOR_TYPE_ID); + + copy_vector->lgr_nr = src_vector->lgr_nr; + copy_vector->grid_index_list = int_vector_alloc_copy( src_vector->grid_index_list ); + copy_vector->nnc_index_list = int_vector_alloc_copy( src_vector->nnc_index_list ); + return copy_vector; +} + + +bool nnc_vector_equal( const nnc_vector_type * nnc_vector1 , const nnc_vector_type * nnc_vector2) { + if (nnc_vector1 == nnc_vector2) + return true; + + if ((nnc_vector1 == NULL) || (nnc_vector2 == NULL)) + return false; + + { + if (nnc_vector1->lgr_nr != nnc_vector2->lgr_nr) + return false; + + if (!int_vector_equal( nnc_vector1->grid_index_list , nnc_vector2->grid_index_list)) + return false; + + if (!int_vector_equal( nnc_vector1->nnc_index_list , nnc_vector2->nnc_index_list)) + return false; + + return true; + } +} + + void nnc_vector_free( nnc_vector_type * nnc_vector ) { int_vector_free( nnc_vector->grid_index_list ); int_vector_free( nnc_vector->nnc_index_list ); diff --git a/ThirdParty/Ert/devel/libecl/src/point.c b/ThirdParty/Ert/devel/libecl/src/point.c index 57236b6aa4..fc2435ab6f 100644 --- a/ThirdParty/Ert/devel/libecl/src/point.c +++ b/ThirdParty/Ert/devel/libecl/src/point.c @@ -16,8 +16,10 @@ for more details. */ +#include #include #include +#include #include @@ -39,7 +41,7 @@ void point_mapaxes_invtransform( point_type * p , const double origo[2], const d double dy = p->y - origo[1]; - double org_x = (dx*unit_y[1] - dy*unit_y[0]) * norm; + double org_x = ( dx*unit_y[1] - dy*unit_y[0]) * norm; double org_y = (-dx*unit_x[1] + dy*unit_x[0]) * norm; p->x = org_x; @@ -48,12 +50,19 @@ void point_mapaxes_invtransform( point_type * p , const double origo[2], const d - void point_compare( const point_type *p1 , const point_type * p2, bool * equal) { - const double tolerance = 0.0001; - if ((abs(p1->x - p2->x) + abs(p1->y - p2->y) + abs(p1->z - p2->z)) > tolerance) + const double tolerance = 0.001; + + double diff_x = (abs(p1->x - p2->x) / abs(p1->x + p2->x + 1)); + double diff_y = (abs(p1->y - p2->y) / abs(p1->y + p2->y + 1)); + double diff_z = (abs(p1->z - p2->z) / abs(p1->z + p2->z + 1)); + + if (diff_x + diff_y + diff_z > tolerance) *equal = false; +} +bool point_equal( const point_type *p1 , const point_type * p2) { + return (memcmp( p1 , p2 , sizeof * p1 ) == 0); } @@ -64,8 +73,12 @@ void point_dump( const point_type * p , FILE * stream) { } -void point_dump_ascii( const point_type * p , FILE * stream) { - fprintf(stream , "(%7.2f, %7.2f, %7.2f) " , p->x , p->y , p->z); +void point_dump_ascii( const point_type * p , FILE * stream , const double * offset) { + if (offset) + fprintf(stream , "(%7.2f, %7.2f, %7.2f) " , p->x - offset[0], p->y - offset[1] , p->z - offset[2]); + else + fprintf(stream , "(%7.2f, %7.2f, %7.2f) " , p->x , p->y , p->z); + } @@ -184,21 +197,21 @@ void point_normal_vector(point_type * n, const point_type * p0, const point_type /** This function calculates the (signed) distance from point 'p' to - the plane specifed by the plane vector 'n' andthe point + the plane specifed by the plane vector 'n' and the point 'plane_point' which is part of the plane. */ double point_plane_distance(const point_type * p , const point_type * n , const point_type * plane_point) { point_type * diff = point_alloc_diff( p , plane_point ); double d = point_dot_product( n , diff ); - - printf("plane_point: "); point_fprintf( plane_point , stdout ); printf("\n"); - printf("p: "); point_fprintf( p , stdout ); printf("\n"); - printf("diff: "); point_fprintf( diff , stdout ); printf("\n"); - free( diff ); return d; } +double point3_plane_distance(const point_type * p0 , const point_type * p1 , const point_type * p2 , const point_type * x) { + point_type n; + point_normal_vector( &n , p0 , p1 , p2 ); + return point_plane_distance( x , &n , p0 ) / sqrt( n.x*n.x + n.y*n.y + n.z*n.z); +} diff --git a/ThirdParty/Ert/devel/libecl/src/tetrahedron.c b/ThirdParty/Ert/devel/libecl/src/tetrahedron.c index 6a9d6cf0a5..fb45b22c22 100644 --- a/ThirdParty/Ert/devel/libecl/src/tetrahedron.c +++ b/ThirdParty/Ert/devel/libecl/src/tetrahedron.c @@ -64,17 +64,19 @@ double tetrahedron_volume( const tetrahedron_type * tet ) { point_vector_cross( &b_x_c , &b , &c); - return fabs( point_dot_product( &a , &b_x_c) ) / 6.0; + return point_dot_product( &a , &b_x_c) / 6.0; } + + /** The __sign() function will return 0 for x ==== 0 - it is not exactly zero measure.... */ static int __sign( double x) { - const double zero_tol = 1e-10; + const double zero_tol = 1e-8; if (fabs(x) < zero_tol) return 0; else if (x > 0) @@ -170,8 +172,12 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p const point_type * p3 = tet->p2; const point_type * p4 = tet->p3; - double D0 , D1 , D2 , D3 , D4; + int current_sign , sign; + /* + Special casing around the vertex points should be handled prior to + calling this function. + */ /*****************************************************************/ matrix_iset( D , 0 , 0 , p1->x); @@ -193,10 +199,13 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p matrix_iset( D , 3 , 1 , p4->y); matrix_iset( D , 3 , 2 , p4->z); matrix_iset( D , 3 , 3 , 1); - D0 = matrix_det4( D ); - current_sign = __sign( D0 ); - if (current_sign == 0) - return false; /* A zero volume cell. */ + + { + double D0 = matrix_det4( D ); + current_sign = __sign( D0 ); + if (current_sign == 0) + return false; /* A zero volume cell. */ + } /*****************************************************************/ matrix_iset( D , 0 , 0 , p->x); @@ -218,10 +227,14 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p matrix_iset( D , 3 , 1 , p4->y); matrix_iset( D , 3 , 2 , p4->z); matrix_iset( D , 3 , 3 , 1); - D1 = matrix_det4( D ); - sign = __sign( D1 ); - if ((sign != 0) && (sign != current_sign)) return false; + { + double D1 = matrix_det4( D ); + sign = __sign( D1 ); + if ((sign != 0) && (sign != current_sign)) + return false; + } + /*****************************************************************/ matrix_iset( D , 0 , 0 , p1->x); matrix_iset( D , 0 , 1 , p1->y); @@ -242,10 +255,15 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p matrix_iset( D , 3 , 1 , p4->y); matrix_iset( D , 3 , 2 , p4->z); matrix_iset( D , 3 , 3 , 1); - D2 = matrix_det4( D ); - sign = __sign( D2 ); - if ((sign != 0) && (sign != current_sign)) return false; + + { + double D2 = matrix_det4( D ); + sign = __sign( D2 ); + if ((sign != 0) && (sign != current_sign)) + return false; + } /*****************************************************************/ + matrix_iset( D , 0 , 0 , p1->x); matrix_iset( D , 0 , 1 , p1->y); matrix_iset( D , 0 , 2 , p1->z); @@ -265,10 +283,15 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p matrix_iset( D , 3 , 1 , p4->y); matrix_iset( D , 3 , 2 , p4->z); matrix_iset( D , 3 , 3 , 1); - D3 = matrix_det4( D ); - sign = __sign( D3 ); - if ((sign != 0) && (sign != current_sign)) return false; + + { + double D3 = matrix_det4( D ); + sign = __sign( D3 ); + if ((sign != 0) && (sign != current_sign)) + return false; + } /*****************************************************************/ + matrix_iset( D , 0 , 0 , p1->x); matrix_iset( D , 0 , 1 , p1->y); matrix_iset( D , 0 , 2 , p1->z); @@ -288,11 +311,13 @@ bool tetrahedron_contains__( const tetrahedron_type * tet , const point_type * p matrix_iset( D , 3 , 1 , p->y); matrix_iset( D , 3 , 2 , p->z); matrix_iset( D , 3 , 3 , 1); - D4 = matrix_det4( D ); - sign = __sign( D4 ); - if ((sign != 0) && (sign != current_sign)) return false; - /*****************************************************************/ - + + { + double D4 = matrix_det4( D ); + sign = __sign( D4 ); + if ((sign != 0) && (sign != current_sign)) + return false; + } return true; } @@ -303,3 +328,11 @@ bool tetrahedron_contains( const tetrahedron_type * tet , const point_type * p) matrix_free( D ); return contains; } + + +void tetrahedron_fprintf( const tetrahedron_type * tet , FILE * stream , const double* offset) { + fprintf(stream , "P0: "); point_dump_ascii( tet->p0 , stream , offset); fprintf(stream , "\n"); + fprintf(stream , "P1: "); point_dump_ascii( tet->p1 , stream , offset); fprintf(stream , "\n"); + fprintf(stream , "P2: "); point_dump_ascii( tet->p2 , stream , offset); fprintf(stream , "\n"); + fprintf(stream , "P3: "); point_dump_ascii( tet->p3 , stream , offset); fprintf(stream , "\n"); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/data/num_cpu4 b/ThirdParty/Ert/devel/libecl/tests/data/num_cpu4 new file mode 100644 index 0000000000..224c2726d1 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/data/num_cpu4 @@ -0,0 +1,3 @@ +PARALLEL + 4 / + diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_collection_statoil.c b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_collection_statoil.c new file mode 100644 index 0000000000..73b6e2a2f1 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_collection_statoil.c @@ -0,0 +1,78 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_fault_block_collection_statoil.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include + +#include +#include +#include + + + +void test_create( const ecl_grid_type * grid , const ecl_kw_type * fault_block_kw) { + fault_block_collection_type * fault_blocks = fault_block_collection_alloc( grid ); + test_assert_true( fault_block_collection_is_instance( fault_blocks )); + test_assert_int_equal( ecl_grid_get_nz( grid ) , fault_block_collection_num_layers( fault_blocks )); + fault_block_collection_free( fault_blocks ); +} + + + +void test_get_layer( const ecl_grid_type * grid , const ecl_kw_type * fault_block_kw) { + fault_block_collection_type * fault_blocks = fault_block_collection_alloc( grid ); + + test_assert_NULL( fault_block_collection_get_layer( fault_blocks , -1 )); + test_assert_NULL( fault_block_collection_get_layer( fault_blocks , ecl_grid_get_nz( grid ) )); + { + int k; + for (k = 0; k < ecl_grid_get_nz( grid ); k++) { + fault_block_layer_type * layer = fault_block_collection_get_layer( fault_blocks , k ); + test_assert_true( fault_block_layer_is_instance( layer )); + } + } + fault_block_collection_free( fault_blocks ); +} + + + + + + +int main(int argc , char ** argv) { + const char * grid_file = argv[1]; + const char * fault_blk_file = argv[2]; + ecl_grid_type * ecl_grid = ecl_grid_alloc( grid_file ); + ecl_kw_type * fault_blk_kw; + { + FILE * stream = util_fopen( fault_blk_file , "r"); + fault_blk_kw = ecl_kw_fscanf_alloc_grdecl( stream , "FAULTBLK" , ecl_grid_get_global_size( ecl_grid ) , ECL_INT_TYPE); + fclose( stream ); + } + + + test_create( ecl_grid , fault_blk_kw ); + test_get_layer( ecl_grid , fault_blk_kw ); + + + ecl_grid_free( ecl_grid ); + ecl_kw_free( fault_blk_kw ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer.c b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer.c new file mode 100644 index 0000000000..a7a7a2b6d4 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer.c @@ -0,0 +1,194 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_fault_block_layer.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include + +#include +#include +#include + + + + +void test_create( const ecl_grid_type * grid , ecl_kw_type * fault_block_kw) { + int k = 0; + int i,j; + + for (j=0; j < ecl_grid_get_ny( grid ); j++) { + for (i = 0; i < ecl_grid_get_nx( grid ); i++) { + + int g = ecl_grid_get_global_index3( grid , i,j,k); + ecl_kw_iset_int( fault_block_kw , g , 9 ); + } + } + + { + fault_block_layer_type * layer = fault_block_layer_alloc( grid , k ); + test_assert_int_equal( 1 , fault_block_layer_get_next_id( layer )); + fault_block_layer_scan_kw( layer , fault_block_kw); + { + fault_block_type * block = fault_block_layer_iget_block( layer , 0 ); + double x,y,z; + ecl_grid_get_xyz3( grid , 4,4,k , &x, &y , &z ); + test_assert_double_equal( x , fault_block_get_xc( block )); + test_assert_double_equal( y , fault_block_get_yc( block )); + } + + fault_block_layer_free( layer ); + } +} + + + + +void test_create_invalid( const ecl_grid_type * grid ) { + ecl_kw_type * fault_blk_kw = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( grid ) - 1, ECL_INT_TYPE ); + + test_assert_NULL( fault_block_layer_alloc( grid , 7 )); + + ecl_kw_free( fault_blk_kw ); +} + + +void test_trace_edge( const ecl_grid_type * grid) { + const int k = 1; + fault_block_layer_type * layer = fault_block_layer_alloc( grid , k ); + double_vector_type * x_list = double_vector_alloc( 0,0); + double_vector_type * y_list = double_vector_alloc( 0,0); + fault_block_type * block = fault_block_layer_safe_get_block( layer , 99); + int_vector_type * cell_list = int_vector_alloc(0,0); + + test_assert_false( fault_block_trace_edge( block , x_list , y_list , cell_list)); + fault_block_add_cell( block , 0,0); + test_assert_true( fault_block_trace_edge( block , x_list , y_list , cell_list)); + test_assert_int_equal( 4 , double_vector_size( x_list )); + test_assert_int_equal( 4 , double_vector_size( y_list )); + + test_assert_double_equal( 0 , double_vector_iget( x_list , 0 )); + test_assert_double_equal( 1 , double_vector_iget( x_list , 1 )); + test_assert_double_equal( 1 , double_vector_iget( x_list , 2 )); + test_assert_double_equal( 0 , double_vector_iget( x_list , 3 )); + + test_assert_double_equal( 0 , double_vector_iget( y_list , 0 )); + test_assert_double_equal( 0 , double_vector_iget( y_list , 1 )); + test_assert_double_equal( 1 , double_vector_iget( y_list , 2 )); + test_assert_double_equal( 1 , double_vector_iget( y_list , 3 )); + + test_assert_int_equal( 1 , int_vector_size( cell_list )); + test_assert_int_equal( 0 , int_vector_iget( cell_list , 0)); + + int_vector_free( cell_list ); + double_vector_free( x_list ); + double_vector_free( y_list ); +} + + +void test_export( const ecl_grid_type * grid) { + fault_block_layer_type * layer = fault_block_layer_alloc( grid , 0 ); + ecl_kw_type * ecl_kw1 = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( grid ) , ECL_INT_TYPE ); + ecl_kw_type * ecl_kw2 = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( grid ) + 1 , ECL_INT_TYPE ); + ecl_kw_type * ecl_kw3 = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( grid ) , ECL_FLOAT_TYPE ); + fault_block_type * block = fault_block_layer_add_block( layer , 10 ); + + fault_block_add_cell( block , 0 , 0 ); + fault_block_add_cell( block , 1 , 0 ); + fault_block_add_cell( block , 1 , 1 ); + fault_block_add_cell( block , 0 , 1 ); + + + test_assert_true( fault_block_layer_export( layer , ecl_kw1 )); + test_assert_false( fault_block_layer_export( layer , ecl_kw2 )); + test_assert_false( fault_block_layer_export( layer , ecl_kw3 )); + + { + int nx = ecl_grid_get_nx( grid ); + + test_assert_int_equal( ecl_kw_iget_int( ecl_kw1 , 0 ) , 10 ); + test_assert_int_equal( ecl_kw_iget_int( ecl_kw1 , 1 ) , 10 ); + test_assert_int_equal( ecl_kw_iget_int( ecl_kw1 , nx ) , 10 ); + test_assert_int_equal( ecl_kw_iget_int( ecl_kw1 , nx + 1 ) , 10 ); + } + test_assert_int_equal( 40 , ecl_kw_element_sum_int( ecl_kw1 )); + + fault_block_layer_free( layer ); + ecl_kw_free( ecl_kw1 ); + ecl_kw_free( ecl_kw2 ); + ecl_kw_free( ecl_kw3 ); +} + + +void test_neighbours( const ecl_grid_type * grid) { + const int k = 0; + fault_block_layer_type * layer = fault_block_layer_alloc( grid , k ); + ecl_kw_type * ecl_kw = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( grid ) , ECL_INT_TYPE ); + + ecl_kw_iset_int( ecl_kw , 0 , 1); + ecl_kw_iset_int( ecl_kw , ecl_grid_get_global_index3( grid , 3,3,k) , 2); + ecl_kw_iset_int( ecl_kw , ecl_grid_get_global_index3( grid , 4,3,k) , 3); + ecl_kw_iset_int( ecl_kw , ecl_grid_get_global_index3( grid , 5,3,k) , 4); + ecl_kw_iset_int( ecl_kw , ecl_grid_get_global_index3( grid , 4,2,k) , 5); + fault_block_layer_load_kw( layer , ecl_kw); + + { + int_vector_type * neighbours = int_vector_alloc( 0,0); + { + fault_block_type * block = fault_block_layer_get_block( layer , 1 ); + + test_assert_int_equal( 0 , int_vector_size( neighbours )); + fault_block_list_neighbours( block , neighbours ); + test_assert_int_equal( 0 , int_vector_size( neighbours )); + } + + { + fault_block_type * block = fault_block_layer_get_block( layer , 2 ); + + fault_block_list_neighbours( block , neighbours ); + test_assert_int_equal( 1 , int_vector_size( neighbours )); + test_assert_true( int_vector_contains( neighbours , 3 )); + } + int_vector_free( neighbours ); + + + } + + + fault_block_layer_free( layer ); + ecl_kw_free( ecl_kw ); +} + + + +int main(int argc , char ** argv) { + ecl_grid_type * ecl_grid = ecl_grid_alloc_rectangular( 9 , 9 , 2 , 1 , 1 , 1 , NULL ); + ecl_kw_type * fault_blk_kw = ecl_kw_alloc("FAULTBLK" , ecl_grid_get_global_size( ecl_grid ) , ECL_INT_TYPE ); + + test_create( ecl_grid , fault_blk_kw ); + test_create_invalid( ecl_grid ); + test_trace_edge( ecl_grid ); + test_export(ecl_grid); + test_neighbours( ecl_grid ); + + ecl_grid_free( ecl_grid ); + ecl_kw_free( fault_blk_kw ); + exit(0); +} + + diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer_statoil.c b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer_statoil.c new file mode 100644 index 0000000000..c14b094090 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_fault_block_layer_statoil.c @@ -0,0 +1,89 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_fault_block_layer_statoil.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include + +#include +#include +#include + + +void test_create( const ecl_grid_type * grid , const ecl_kw_type * fault_block_kw) { + test_assert_NULL( fault_block_layer_alloc( grid , -1 )); + test_assert_NULL( fault_block_layer_alloc( grid , ecl_grid_get_nz( grid ))); + + { + int k; + for (k = 0; k < ecl_grid_get_nz( grid ); k++) { + fault_block_layer_type * layer = fault_block_layer_alloc( grid , k); + test_assert_true( fault_block_layer_is_instance( layer )); + + fault_block_layer_scan_kw( layer , fault_block_kw); + { + int max_block_id = fault_block_layer_get_max_id( layer ); + int block_id; + + for (block_id = 0; block_id <= max_block_id; block_id++) { + if (fault_block_layer_has_block( layer , block_id)) { + fault_block_type * block = fault_block_layer_get_block( layer , block_id ); + fault_block_get_xc( block ); + fault_block_get_yc( block ); + } + } + } + + { + int index; + for (index = 0; index < fault_block_layer_get_size( layer ); index++) { + fault_block_type * block = fault_block_layer_iget_block( layer , index ); + fault_block_get_xc( block ); + fault_block_get_yc( block ); + } + } + + fault_block_layer_free( layer ); + } + } +} + + + + +int main(int argc , char ** argv) { + const char * grid_file = argv[1]; + const char * fault_blk_file = argv[2]; + ecl_grid_type * ecl_grid = ecl_grid_alloc( grid_file ); + ecl_kw_type * fault_blk_kw; + { + FILE * stream = util_fopen( fault_blk_file , "r"); + fault_blk_kw = ecl_kw_fscanf_alloc_grdecl( stream , "FAULTBLK" , ecl_grid_get_global_size( ecl_grid ) , ECL_INT_TYPE); + fclose( stream ); + } + + + test_create( ecl_grid , fault_blk_kw ); + + ecl_grid_free( ecl_grid ); + ecl_kw_free( fault_blk_kw ); + exit(0); +} + + diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_fortio.c b/ThirdParty/Ert/devel/libecl/tests/ecl_fortio.c index 631b2fcc0e..6ac5d1ad01 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_fortio.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_fortio.c @@ -20,6 +20,7 @@ #include #include +#include #include #include @@ -32,6 +33,38 @@ void test_existing_read(const char * filename) { } +void test_fortio_is_instance(const char * filename ) { + { + fortio_type * fortio = fortio_open_reader( filename , false , ECL_ENDIAN_FLIP); + test_assert_not_NULL( fortio ); + test_assert_true(fortio_is_instance(fortio)); + fortio_fclose( fortio ); + } + { + vector_type * dummy_vector = vector_alloc_new(); + test_assert_false(fortio_is_instance(dummy_vector)); + vector_free(dummy_vector); + } +} + + +void test_fortio_safe_cast(const char * filename ) { + void * i_am_a_fortio = fortio_open_reader( filename , false , ECL_ENDIAN_FLIP); + test_assert_not_NULL( i_am_a_fortio ); + fortio_type * fortio = fortio_safe_cast(i_am_a_fortio); + test_assert_true(fortio_is_instance(fortio)); + fortio_fclose( fortio ); +} + + +void test_fortio_unsafe_cast(void * arg) { + void * i_am_not_a_fortio = vector_alloc_new(); + test_assert_not_NULL( i_am_not_a_fortio ); + fortio_safe_cast(i_am_not_a_fortio); +} + + + void test_not_existing_read() { fortio_type * fortio = fortio_open_reader( "/does/not/exist" , false , ECL_ENDIAN_FLIP); test_assert_NULL( fortio ); @@ -78,6 +111,9 @@ void test_open_close_read( const char * filename ) { int main( int argc , char ** argv) { const char * file = argv[1]; + test_fortio_is_instance( file ); + test_fortio_safe_cast( file ); + test_assert_util_abort("fortio_safe_cast", test_fortio_unsafe_cast, NULL); test_existing_read( file ); test_not_existing_read( ); test_open_close_read( file ); diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_get_num_cpu_test.c b/ThirdParty/Ert/devel/libecl/tests/ecl_get_num_cpu_test.c index f84f1fe059..f5458e2de3 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_get_num_cpu_test.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_get_num_cpu_test.c @@ -26,10 +26,14 @@ int main(int argc , char ** argv) { const char * filename1 = argv[1]; const char * filename2 = argv[2]; const char * filename3 = argv[3]; + const char * filename4 = argv[4]; + int num_cpu = 4; test_assert_int_equal(ecl_util_get_num_cpu(filename1), num_cpu); test_assert_int_equal(ecl_util_get_num_cpu(filename2), num_cpu); test_assert_int_equal(ecl_util_get_num_cpu(filename3), num_cpu); + test_assert_int_equal(ecl_util_get_num_cpu(filename4), num_cpu); exit(0); + } diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_DEPTHZ.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_DEPTHZ.c new file mode 100644 index 0000000000..fddbb8acdb --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_DEPTHZ.c @@ -0,0 +1,188 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_DEPTHZ.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include + +#include +#include + + +double zfunc(double x , double y) { + return cos(3*x)*sin(2*y)*sqrt(x*y); +} + +double center_sum(const double * DV, int index) { + double sum = DV[index] * 0.5; + + for (int i=0; i < index; i++) + sum += DV[i]; + + return sum; +} + + +void test_create() { + ecl_grid_type * ecl_grid; + int nx = 100; + int ny = 100; + int nz = 10; + + double * DXV = util_malloc( nx * sizeof * DXV ); + double * DYV = util_malloc( ny * sizeof * DYV ); + double * DZV = util_malloc( nz * sizeof * DZV ); + double * DEPTHZ = util_malloc( (nx + 1) * (ny + 1) * sizeof * DEPTHZ); + + for (int i=0; i < nx; i++) + DXV[i] = 1.0 / nx; + + for (int j=0; j < ny; j++) + DYV[j] = 1.0 / ny; + + for (int k=0; k < nz; k++) + DZV[k] = 3.0 / nz; + + + for (int j=0; j <= ny; j++) { + double y = center_sum(DYV , j); + for (int i=0; i <= nx; i++) { + double x = center_sum(DXV , i); + + DEPTHZ[i + j*(nx + 1)] = zfunc( x,y ); + } + } + + ecl_grid = ecl_grid_alloc_dxv_dyv_dzv_depthz( nx,ny,nz,DXV , DYV , DZV , DEPTHZ , NULL); + + for (int k=0; k < nz; k++) { + double z0 = center_sum(DZV , k ) - 0.5*DZV[0]; + for (int j=0; j < ny; j++) { + double y0 = center_sum(DYV , j ); + for (int i=0; i < nx; i++) { + double x0 = center_sum(DXV , i ); + double xc,yc,zc; + int g = ecl_grid_get_global_index3( ecl_grid , i , j , k ); + + ecl_grid_get_xyz1( ecl_grid , g , &xc , &yc , &zc); + test_assert_double_equal( x0 , xc ); + test_assert_double_equal( y0 , yc ); + + ecl_grid_get_cell_corner_xyz1( ecl_grid , g , 0 , &xc , &yc , &zc); + test_assert_double_equal( z0 + zfunc(x0 , y0) , zc ); + + ecl_grid_get_cell_corner_xyz1( ecl_grid , g , 4, &xc , &yc , &zc); + test_assert_double_equal( z0 + zfunc(x0 , y0) + DZV[k] , zc ); + } + } + } + + + free( DXV ); + free( DYV ); + free( DZV ); + free( DEPTHZ ); + ecl_grid_free( ecl_grid ); +} + + +void test_compare() { + int nx = 10; + int ny = 15; + int nz = 5; + int V = nx*ny*nz; + + double dx = 10; + double dy = 15; + double dz = 10; + double z0 = 0; + + + ecl_grid_type * grid1; + ecl_grid_type * grid2; + + { + double * DX = util_malloc( V * sizeof * DX ); + double * DY = util_malloc( V * sizeof * DY ); + double * DZ = util_malloc( V * sizeof * DZ ); + double * TOPS = util_malloc( V * sizeof * TOPS ); + + for (int i = 0; i < V; i++) { + DX[i] = dx; + DY[i] = dy; + DZ[i] = dz; + } + + for (int i = 0; i < nx*ny; i++) { + TOPS[i] = z0; + } + + for (int k=1; k < nz; k++) { + for (int i = 0; i < nx*ny; i++) { + int g2 = k*nx*ny + i; + int g1 = (k- 1)*nx*ny + i; + TOPS[g2] = TOPS[g1]; + } + } + + + grid1 = ecl_grid_alloc_dx_dy_dz_tops( nx , ny , nz , DX , DY , DZ , TOPS , NULL ); + free( DX ); + free( DY ); + free( DZ ); + free( TOPS ); + } + + { + double * DXV = util_malloc( nx * sizeof * DXV ); + double * DYV = util_malloc( ny * sizeof * DYV ); + double * DZV = util_malloc( nz * sizeof * DZV ); + double * DEPTHZ = util_malloc( (nx + 1)*(ny + 1) * sizeof * DEPTHZ); + + for (int i = 0; i < nx; i++) + DXV[i] = dx; + + for (int i = 0; i < ny; i++) + DYV[i] = dy; + + for (int i = 0; i < nz; i++) + DZV[i] = dz; + + for (int i = 0; i < (nx + 1)*(ny+ 1); i++) + DEPTHZ[i] = z0; + + + grid2 = ecl_grid_alloc_dxv_dyv_dzv_depthz( nx , ny , nz , DXV , DYV , DZV , DEPTHZ , NULL ); + free( DXV ); + free( DYV ); + free( DZV ); + free( DEPTHZ ); + } + + test_assert_true( ecl_grid_compare( grid1 , grid2 , true , true , true)); + ecl_grid_free( grid1 ); + ecl_grid_free( grid2 ); +} + + + +int main(int argc , char ** argv) { + test_create(); + test_compare(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_contains.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_contains.c new file mode 100644 index 0000000000..734a285cae --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_contains.c @@ -0,0 +1,288 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_cell_contains.c' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include + +#include + +#include +#include + + + + +void test_grid_covering( const ecl_grid_type * grid) { + const int nx = ecl_grid_get_nx( grid ); + const int ny = ecl_grid_get_ny( grid ); + const int nz = ecl_grid_get_nz( grid ); + + for (int k=0; k < nz - 1; k++) { + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + int g1 = ecl_grid_get_global_index3(grid, i,j,k); + int g2 = ecl_grid_get_global_index3(grid, i,j,k + 1); + point_type p1; + point_type p2; + + for (int l=0; l < 4; l++) { + ecl_grid_get_cell_corner_xyz1( grid , g1 , l + 4 , &p1.x , &p1.y , &p1.z); + ecl_grid_get_cell_corner_xyz1( grid , g2 , l , &p2.x , &p2.y , &p2.z); + test_assert_true( point_equal( &p1 , &p2 )); + } + + + for (int l=0; l < 4; l++) { + ecl_grid_get_cell_corner_xyz1( grid , g1 , l , &p1.x , &p1.y , &p1.z); + ecl_grid_get_cell_corner_xyz1( grid , g1 , l + 4 , &p2.x , &p2.y , &p2.z); + + test_assert_true( p2.z >= p1.z ); + } + } + } + } +} + + + +void test_contains_count( const ecl_grid_type * grid ) { + int error_count = 0; + const int nx = ecl_grid_get_nx( grid ); + const int ny = ecl_grid_get_ny( grid ); + const int nz = ecl_grid_get_nz( grid ); + + for (int k=0; k < nz; k++) { + printf("k: %d/%d \n", k , nz - 1); + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + double x,y,z; + ecl_grid_get_xyz3( grid , i,j,k , &x,&y,&z); + { + int i2,j2,k2; + int contains_count = 0; + int kmin = util_int_max( 0 , k - 1 ); + int kmax = util_int_min( nz , k + 1 ); + + int jmin = util_int_max( 0 , j - 1 ); + int jmax = util_int_min( ny , j + 1 ); + + int imin = util_int_max( 0 , i - 1 ); + int imax = util_int_min( nx , i + 1 ); + + + for (k2 = kmin; k2 < kmax; k2++) { + for (j2 = jmin; j2 < jmax; j2++) { + for (i2 = imin; i2 < imax; i2++) { + if (ecl_grid_cell_contains_xyz3( grid , i2,j2,k2 , x,y, z )) { + contains_count++; + } + } + } + } + + if (contains_count != 1) { + if (contains_count > 1) + error_count += 1; + else + if (ecl_grid_cell_regular3( grid , i,j,k)) + error_count += 1; + } + } + } + } + } + test_assert_int_equal( error_count , 0 ); +} + + + +void test_find( ecl_grid_type * grid ) { + int init_index; + int find_count = 100; + int delta = util_int_max(1 , ecl_grid_get_global_size( grid ) / find_count); + for (init_index = 0; init_index < ecl_grid_get_global_size( grid ); init_index += delta) { + printf("find index:%d \n",init_index / delta); + if (!ecl_grid_cell_invalid1(grid , init_index) && ecl_grid_cell_regular1( grid , init_index) ) { + double x,y,z; + int find_index; + int start_index = 0; + + ecl_grid_get_xyz1( grid , init_index , &x,&y,&z); + find_index = ecl_grid_get_global_index_from_xyz(grid , x, y , z , start_index ); + test_assert_int_equal(init_index , find_index ); + } + } +} + + +// /* +// Will indeed answer yes when asked if it contains it's own center. +// */ +// test_assert_true( ecl_grid_cell_contains_xyz1( grid , init_index , x,y,z) ); +// +// if (1) +// { +// int start_index = 0; +// +// if (find_index != init_index) { +// int init_ijk[3]; +// int find_ijk[3]; +// +// ecl_grid_get_ijk1( grid , find_index , &find_ijk[0] , &find_ijk[1] , &find_ijk[2]); +// ecl_grid_get_ijk1( grid , init_index , &init_ijk[0] , &init_ijk[1] , &init_ijk[2]); +// +// printf("ijk: %d:(%2d,%2d,%2d) -> %d:(%2d,%2d,%2d) \n",init_index , init_ijk[0] , init_ijk[1] , init_ijk[2] , find_index , find_ijk[0] , find_ijk[1], find_ijk[2]); +// global_error += 1; +// } +// +// if (0) { +// //if (find_index != init_index) { +// int init_ijk[3]; +// int find_ijk[3]; +// +// ecl_grid_get_ijk1( grid , find_index , &find_ijk[0] , &find_ijk[1] , &find_ijk[2]); +// ecl_grid_get_ijk1( grid , init_index , &init_ijk[0] , &init_ijk[1] , &init_ijk[2]); +// +// { +// printf("ijk: (%2d,%2d,%2d) -> (%2d,%2d,%2d) \n",init_ijk[0] , init_ijk[1] , init_ijk[2] , find_ijk[0] , find_ijk[1], find_ijk[2]); +// +// if (0) { +// printf(" ecl_grid_cell_contains_xyz3(%d,%d,%d) : %d Volume:%g \n",init_ijk[0] , init_ijk[1], init_ijk[2] , +// ecl_grid_cell_contains_xyz3( grid , init_ijk[0] , init_ijk[1], init_ijk[2] , x , y , z ), +// ecl_grid_get_cell_volume1( grid , init_index)); +// +// printf(" ecl_grid_cell_contains_xyz3(%d,%d,%d) : %d Volume:%g \n",find_ijk[0] , find_ijk[1], find_ijk[2] , +// ecl_grid_cell_contains_xyz3( grid , find_ijk[0] , find_ijk[1], find_ijk[2] , x , y , z ), +// ecl_grid_get_cell_volume1( grid , find_index)); +// } +// +// { +// int find_index2 = ecl_grid_get_global_index_from_xyz(grid , x, y , z , init_index ); +// printf("find_index2:%d \n",find_index2); +// } +// +// printf("init_index:%d find_index:%d \n",init_index , find_index); +// if (find_index >= 0) +// printf("Vrengte: %d\n",ecl_grid_cell_inside_out1( grid , find_index)); +// printf("Vrengte: %d\n",ecl_grid_cell_inside_out1( grid , init_index)); +// +// { +// bool init_cell_inside_out = ecl_grid_cell_inside_out1( grid , init_index); +// bool find_cell_inside_out = false; +// +// if (find_index >= 0) +// find_cell_inside_out = ecl_grid_cell_inside_out1( grid , find_index ); +// else +// test_assert_int_not_equal( -1 , find_index ); +// +// if (find_cell_inside_out == init_cell_inside_out) { +// if (init_cell_inside_out == false) +// test_assert_int_equal( init_index , find_index ); +// } +// } +// } +// } +// } +// } +// } +//} + + +void test_corners() { + ecl_grid_type * grid = ecl_grid_alloc_rectangular(3,3,3,1,1,1,NULL); + + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , -1,-1,-1 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , -1, 1, 1 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 1,-1, 1 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 1, 1,-1 , 0)); + + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 3.5 , 3.5 , 3.5 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 3.5 , 1 , 1 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 1 , 3.5 , 1 , 0)); + test_assert_int_equal( -1 , ecl_grid_get_global_index_from_xyz( grid , 1 , 1 , 3.5 , 0)); + + { + double x,y,z; + int i; + ecl_grid_get_cell_corner_xyz3( grid , 0, 0, 0 , 0 , &x , &y , &z); + test_assert_int_equal( 0 , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + for (i=1; i < 8; i++) { + ecl_grid_get_cell_corner_xyz3( grid , 0, 0, 0 , i , &x , &y , &z); + test_assert_int_not_equal( 0 , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + } + + // Corner 1 + ecl_grid_get_cell_corner_xyz3(grid , 2,0,0,1 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 2,0,0 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 2 + ecl_grid_get_cell_corner_xyz3(grid , 0,2,0,2 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 0,2,0 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 3 + ecl_grid_get_cell_corner_xyz3(grid , 2,2,0,3 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 2,2,0 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 4 + ecl_grid_get_cell_corner_xyz3(grid , 0,0,2,4 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 0,0,2 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 5 + ecl_grid_get_cell_corner_xyz3(grid , 2,0,2,5 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 2,0,2 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 6 + ecl_grid_get_cell_corner_xyz3(grid , 0,2,2,6 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 0,2,2 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + + // Corner 7 + ecl_grid_get_cell_corner_xyz3(grid , 2,2,2,7 , &x,&y,&z); + test_assert_int_equal( ecl_grid_get_global_index3( grid , 2,2,2 ) , ecl_grid_get_global_index_from_xyz( grid , x,y,z,0)); + } + + ecl_grid_free( grid ); +} + + + + + + +int main(int argc , char ** argv) { + ecl_grid_type * grid; + int case_nr; + + util_install_signals(); + util_sscanf_int( argv[1] , &case_nr ); + + if (argc == 2) { + grid = ecl_grid_alloc_rectangular(6,6,6,1,2,3,NULL); + } else + grid = ecl_grid_alloc( argv[2] ); + + test_grid_covering( grid ); + test_contains_count( grid ); + + + test_find(grid); + test_corners(); + ecl_grid_free( grid ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_volume.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_volume.c new file mode 100644 index 0000000000..9900ce4bd2 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_cell_volume.c @@ -0,0 +1,57 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_cell_contains.c' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include + +#include + +#include + + +void test_cells( const ecl_grid_type * grid ) { + int error_count = 0; + int global_index; + for (global_index = 0; global_index < ecl_grid_get_global_size( grid ); global_index++) { + if ((abs(ecl_grid_get_cell_volume1( grid , global_index)) + abs(ecl_grid_get_cell_volume1_tskille( grid , global_index))) > 1e-9) { + if (!test_check_double_equal( ecl_grid_get_cell_volume1( grid , global_index) , ecl_grid_get_cell_volume1_tskille( grid , global_index))) { + fprintf(stderr," Global index:%d \n",global_index); + error_count += 1; + } + } + } + test_assert_int_equal(0 , error_count); +} + + + + + +int main(int argc , char ** argv) { + ecl_grid_type * grid; + + if (argc == 1) + grid = ecl_grid_alloc_rectangular(6,6,6,1,2,3,NULL); + else + grid = ecl_grid_alloc( argv[1] ); + + test_cells( grid ); + ecl_grid_free( grid ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy.c new file mode 100644 index 0000000000..49b8b0600e --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy.c @@ -0,0 +1,48 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_copy.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + + + + + +#include +#include + +#include +#include +#include + +#include + + +void test_copy_grid( const ecl_grid_type * grid ) { + ecl_grid_type * grid_copy = ecl_grid_alloc_copy( grid ); + test_assert_true( ecl_grid_compare( grid , grid_copy , true , true , true )); + ecl_grid_free( grid_copy ); +} + + + +int main( int argc , char ** argv) { + ecl_grid_type * grid = ecl_grid_alloc_rectangular( 10,11,12,1,2,3 , NULL); + test_copy_grid( grid ); + ecl_grid_free( grid ); + + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy_statoil.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy_statoil.c new file mode 100644 index 0000000000..798aea150e --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_copy_statoil.c @@ -0,0 +1,52 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_copy_statoil.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + + + + + +#include +#include + +#include +#include +#include + +#include + + +void test_copy_grid( const char * filename ) { + { + ecl_grid_type * src_grid = ecl_grid_alloc( filename ); + ecl_grid_type * copy_grid = ecl_grid_alloc_copy( src_grid ); + test_assert_true( ecl_grid_compare( src_grid , copy_grid , true , true , true )); + ecl_grid_free( copy_grid ); + ecl_grid_free( src_grid ); + } +} + + + +int main( int argc , char ** argv) { + int iarg; + for (iarg = 1; iarg < argc; iarg++) + test_copy_grid( argv[iarg] ); + + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_corner.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_corner.c new file mode 100644 index 0000000000..b4adf52270 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_corner.c @@ -0,0 +1,72 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_corner.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include + +#include + + +void invalid_call1( void * arg ) { + ecl_grid_type * grid = ecl_grid_safe_cast( arg ); + double x,y,z; + + ecl_grid_get_corner_xyz( grid , 10,10,11 , &x,&y,&z); +} + + + +void test_invalid( ecl_grid_type * grid) { + test_assert_util_abort( "ecl_grid_get_corner_xyz" , invalid_call1 , grid ); +} + + + +void test_OK( const ecl_grid_type * grid) { + double x,y,z; + + ecl_grid_get_corner_xyz( grid , 0,0,0,&x,&y,&z); + test_assert_double_equal( x,0 ); + test_assert_double_equal( y,0 ); + test_assert_double_equal( z,0 ); + + ecl_grid_get_corner_xyz( grid , 4,5,6,&x,&y,&z); + test_assert_double_equal( x,4 ); + test_assert_double_equal( y,5 ); + test_assert_double_equal( z,6 ); + + ecl_grid_get_corner_xyz( grid , 10,10,10,&x,&y,&z); + test_assert_double_equal( x,10 ); + test_assert_double_equal( y,10 ); + test_assert_double_equal( z,10 ); +} + + + + +int main( int argc , char ** argv) { + ecl_grid_type * grid = ecl_grid_alloc_rectangular(10,10,10,1,1,1, NULL); + + test_invalid( grid ); + test_OK(grid); + + ecl_grid_free( grid ); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_create.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_create.c new file mode 100644 index 0000000000..2778159d71 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_create.c @@ -0,0 +1,145 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_create.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include +#include + +#include + + + +void test_create2() { + int nx = 10; + int ny = 8; + int nz = 5; + double * dx = util_calloc( nx*ny*nz , sizeof * dx ); + double * dy = util_calloc( nx*ny*nz , sizeof * dy ); + double * dz = util_calloc( nx*ny*nz , sizeof * dz ); + double * tops = util_calloc( nx*ny*nz , sizeof * dz ); + for (int k=0; k< nz; k++) { + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + int g = k*nx*ny + j*nx + i; + + dx[g] = (i+1); + dy[g] = (j+1); + dz[g] = (k+1); + if (k == 0) + tops[g] = 77; + else + tops[g] = tops[g - nx*ny] + dz[g]; + } + } + } + + { + ecl_grid_type * grid = ecl_grid_alloc_dx_dy_dz_tops( nx , ny , nz , dx , dy , dz , tops , NULL ); + + test_assert_int_equal( nx*ny*nz , ecl_grid_get_global_size( grid )); + test_assert_int_equal( nx*ny*nz , ecl_grid_get_active_size( grid )); + + for (int k=0; k< nz; k++) { + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + int g = k*nx*ny + j*nx + i; + + test_assert_double_equal( ecl_grid_get_cell_volume1( grid , g ) , dx[g] * dy[g] * dz[g]); + } + } + } + { + double x,y,z; + + ecl_grid_get_xyz1(grid , 0 , &x , &y , &z); + test_assert_double_equal( x , dx[0] * 0.5 ); + test_assert_double_equal( y , dy[0] * 0.5 ); + test_assert_double_equal( z , dz[0] * 0.5 + tops[0]); + } + ecl_grid_free( grid ); + } + free( tops ); + free( dx ); + free( dy ); + free( dz ); +} + + +void test_create1() { + int nx = 10; + int ny = 10; + int nz = 10; + double * dx = util_calloc( nx*ny*nz , sizeof * dx ); + double * dy = util_calloc( nx*ny*nz , sizeof * dy ); + double * dz = util_calloc( nx*ny*nz , sizeof * dz ); + double * tops = util_calloc( nx*ny*nz , sizeof * tops ); + for (int k=0; k< nz; k++) { + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + int g = k*nx*ny + j*nx + i; + + dx[g] = 1; + dy[g] = 1; + dz[g] = 1; + if (k == 0) + tops[g] = 0; + else + tops[g] = tops[g - nx*ny] + dz[g]; + } + } + } + + { + ecl_grid_type * grid = ecl_grid_alloc_dx_dy_dz_tops( nx , ny , nz , dx , dy , dz , tops , NULL ); + + test_assert_int_equal( nx*ny*nz , ecl_grid_get_global_size( grid )); + test_assert_int_equal( nx*ny*nz , ecl_grid_get_active_size( grid )); + + for (int k=0; k< nz; k++) { + for (int j=0; j < ny; j++) { + for (int i=0; i < nx; i++) { + int g = k*nx*ny + j*nx + i; + + test_assert_double_equal( ecl_grid_get_cell_volume1( grid , g ) , dx[g] * dy[g] * dz[g]); + + { + double x,y,z; + ecl_grid_get_xyz1(grid , g , &x , &y , &z); + test_assert_double_equal( x , i + 0.5); + test_assert_double_equal( y , j + 0.5); + test_assert_double_equal( z , k + 0.5); + } + } + } + } + ecl_grid_free( grid ); + } + free( tops ); + free( dx ); + free( dy ); + free( dz ); +} + + + +int main(int argc , char ** argv) { + test_create1(); + test_create2(); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_export.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_export.c new file mode 100644 index 0000000000..cd4fc48880 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_export.c @@ -0,0 +1,107 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_export.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include + +#include +#include +#include + + +void export_actnum( const ecl_grid_type * ecl_grid , ecl_file_type * ecl_file ) { + ecl_kw_type * actnum_kw = ecl_file_iget_named_kw( ecl_file , "ACTNUM" , 0 ); + int * actnum = util_malloc( ecl_kw_get_size( actnum_kw ) * sizeof * actnum ); + + ecl_grid_init_actnum_data( ecl_grid , actnum ); + for (int i=0; i < ecl_kw_get_size( actnum_kw); i++) + test_assert_int_equal( actnum[i] , ecl_kw_iget_int( actnum_kw , i )); + + free( actnum ); +} + + +void export_coord( const ecl_grid_type * grid , ecl_file_type * ecl_file ) { + ecl_kw_type * coord_kw = ecl_file_iget_named_kw( ecl_file , "COORD" , 0); + test_assert_int_equal( ecl_kw_get_size( coord_kw ) , ecl_grid_get_coord_size( grid )); + { + float * coord_float = util_malloc( ecl_grid_get_coord_size( grid ) * sizeof * coord_float ); + double * coord_double = util_malloc( ecl_grid_get_coord_size( grid ) * sizeof * coord_double ); + + ecl_grid_init_coord_data( grid , coord_float ); + ecl_grid_init_coord_data_double( grid , coord_double ); + + for (int i=0; i < ecl_grid_get_coord_size( grid ); i++) + test_assert_double_equal( coord_double[i] , coord_float[i]); + + free( coord_float ); + free( coord_double ); + } +} + + +void export_zcorn( const ecl_grid_type * grid , ecl_file_type * ecl_file ) { + ecl_kw_type * zcorn_kw = ecl_file_iget_named_kw( ecl_file , "ZCORN" , 0); + test_assert_int_equal( ecl_kw_get_size( zcorn_kw ) , ecl_grid_get_zcorn_size( grid )); + { + float * zcorn_float = util_malloc( ecl_grid_get_zcorn_size( grid ) * sizeof * zcorn_float ); + double * zcorn_double = util_malloc( ecl_grid_get_zcorn_size( grid ) * sizeof * zcorn_double ); + + ecl_grid_init_zcorn_data( grid , zcorn_float ); + ecl_grid_init_zcorn_data_double( grid , zcorn_double ); + + for (int i=0; i < ecl_grid_get_zcorn_size( grid ); i++) { + test_assert_double_equal( zcorn_double[i] , zcorn_float[i]); + test_assert_float_equal( zcorn_float[i] , ecl_kw_iget_float( zcorn_kw , i )); + } + + + free( zcorn_float ); + free( zcorn_double ); + } +} + + +void export_mapaxes( const ecl_grid_type * grid , ecl_file_type * ecl_file ) { + ecl_kw_type * mapaxes_kw = ecl_file_iget_named_kw( ecl_file , "MAPAXES" , 0); + double mapaxes[6]; + int i; + + test_assert_true( ecl_grid_use_mapaxes( grid )); + ecl_grid_init_mapaxes_data_double( grid , mapaxes ); + for (i= 0; i < 6; i++) + test_assert_double_equal( ecl_kw_iget_float( mapaxes_kw , i) , mapaxes[i]); +} + + + +int main(int argc , char ** argv) { + const char * grid_file = argv[1]; + ecl_grid_type * ecl_grid = ecl_grid_alloc( grid_file ); + ecl_file_type * ecl_file = ecl_file_open( grid_file , 0) ; + + + export_actnum( ecl_grid , ecl_file ); + export_coord( ecl_grid , ecl_file ); + export_zcorn( ecl_grid , ecl_file ); + export_mapaxes( ecl_grid , ecl_file ); + + ecl_file_close( ecl_file ); + ecl_grid_free( ecl_grid ); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_fwrite.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_fwrite.c new file mode 100644 index 0000000000..4425f2b180 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_fwrite.c @@ -0,0 +1,48 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_kw_fwrite.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include +#include + +#include + + +void test_fwrite_EGRID(ecl_grid_type * grid ) { + test_work_area_type * work_area = test_work_area_alloc("grid-has-mapaxes"); + + ecl_grid_fwrite_EGRID( grid , "TEST.EGRID"); + { + ecl_grid_type * copy = ecl_grid_alloc( "TEST.EGRID" ); + test_assert_true( ecl_grid_compare( grid , copy , false , false , true )); + ecl_grid_free( copy ); + } + test_work_area_free( work_area ); +} + + +int main( int argc , char **argv) { + const char * src_file = argv[1]; + ecl_grid_type * grid = ecl_grid_alloc( src_file ); + + test_fwrite_EGRID( grid ); + + ecl_grid_free( grid ); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_reset_actnum.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_reset_actnum.c new file mode 100644 index 0000000000..22f30ad0ee --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_reset_actnum.c @@ -0,0 +1,65 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_grid_reset_actnum.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include + +#include + + + + + +int main(int argc , char ** argv) { + const int nx = 5; + const int ny = 4; + const int nz = 2; + const int g = nx*ny*nz; + const int nactive = g - 9; + const int actnum1[] = {1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1}; + const int actnum2[] = {0, 1, 0, 1, 0, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 0, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 0, 1, 0}; + ecl_grid_type * grid = ecl_grid_alloc_rectangular(nx , ny , nz , 1 , 1 , 1 , actnum1 ); + + + test_assert_int_equal( g , ecl_grid_get_nactive( grid )); + ecl_grid_reset_actnum(grid , actnum2 ); + test_assert_int_equal( nactive , ecl_grid_get_nactive( grid )); + + test_assert_int_equal( -1 , ecl_grid_get_active_index1( grid , 0 )); + test_assert_int_equal( 0 , ecl_grid_get_active_index1( grid , 1 )); + test_assert_int_equal( -1 , ecl_grid_get_active_index1( grid , 2 )); + test_assert_int_equal( 1 , ecl_grid_get_global_index1A( grid , 0 )); + test_assert_int_equal( 3 , ecl_grid_get_global_index1A( grid , 1 )); + test_assert_int_equal( 5 , ecl_grid_get_global_index1A( grid , 2 )); + + + ecl_grid_reset_actnum(grid , NULL ); + test_assert_int_equal( g , ecl_grid_get_nactive( grid )); + test_assert_int_equal( 0 , ecl_grid_get_active_index1( grid , 0 )); + test_assert_int_equal( 1 , ecl_grid_get_active_index1( grid , 1 )); + test_assert_int_equal( 2 , ecl_grid_get_active_index1( grid , 2 )); + test_assert_int_equal( 0 , ecl_grid_get_global_index1A( grid , 0 )); + test_assert_int_equal( 1 , ecl_grid_get_global_index1A( grid , 1 )); + test_assert_int_equal( 2 , ecl_grid_get_global_index1A( grid , 2 )); + + + + ecl_grid_free( grid ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_volume.c b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_volume.c index 0995d5c45a..19c85e636e 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_grid_volume.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_grid_volume.c @@ -39,18 +39,33 @@ int main(int argc , char ** argv) { ecl_grid_type * grid = ecl_grid_alloc( grid_file ); const ecl_kw_type * poro_kw = ecl_file_iget_named_kw( init , "PORO" , 0 ); const ecl_kw_type * porv_kw = ecl_file_iget_named_kw( init , "PORV" , 0 ); + ecl_kw_type * multpv = NULL; + ecl_kw_type * NTG = NULL; bool error_found = false; int error_count = 0; int iactive; + + if (ecl_file_has_kw( init , "NTG")) + NTG = ecl_file_iget_named_kw( init , "NTG" , 0); + + if (ecl_file_has_kw( init , "MULTPV")) + multpv = ecl_file_iget_named_kw( init , "MULTPV" , 0); + for (iactive = 0; iactive < ecl_grid_get_nactive( grid ); ++iactive) { int iglobal = ecl_grid_get_global_index1A( grid , iactive ); double grid_volume = ecl_grid_get_cell_volume1( grid , iglobal ); double eclipse_volume = ecl_kw_iget_float( porv_kw , iglobal ) / ecl_kw_iget_float( poro_kw , iactive ); - + + if (NTG) + eclipse_volume *= ecl_kw_iget_float( NTG , iactive ); + + if (multpv) + eclipse_volume *= ecl_kw_iget_float( multpv , iactive); + if (!util_double_approx_equal__( grid_volume , eclipse_volume , 1e-3)) { - printf("Error in cell: %d V: %g V2: %g \n",iglobal , grid_volume , eclipse_volume ); + printf("Error in cell: %d V: %g V2: %g \n", iglobal , grid_volume , eclipse_volume); error_count++; error_found = true; } diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_kw_init.c b/ThirdParty/Ert/devel/libecl/tests/ecl_kw_init.c new file mode 100644 index 0000000000..f65a0bf464 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_kw_init.c @@ -0,0 +1,65 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'ecl_kw_init.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include + +#include + + +void test_int() { + size_t N = 1000; + int i; + ecl_kw_type * kw = ecl_kw_alloc("KW" , N , ECL_INT_TYPE); + for (i=0; i < N; i++) + test_assert_int_equal( 0 , ecl_kw_iget_int( kw , i )); + + ecl_kw_free( kw ); +} + + +void test_double() { + size_t N = 1000; + double i; + ecl_kw_type * kw = ecl_kw_alloc("KW" , N , ECL_DOUBLE_TYPE); + for (i=0; i < N; i++) + test_assert_double_equal( 0 , ecl_kw_iget_double( kw , i )); + + ecl_kw_free( kw ); +} + + +void test_float() { + size_t N = 1000; + int i; + ecl_kw_type * kw = ecl_kw_alloc("KW" , N , ECL_FLOAT_TYPE); + for (i=0; i < N; i++) + test_assert_int_equal( 0 , ecl_kw_iget_float( kw , i )); + + ecl_kw_free( kw ); +} + + +int main( int argc , char ** argv) { + test_int(); + test_double(); + test_float(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_layer.c b/ThirdParty/Ert/devel/libecl/tests/ecl_layer.c new file mode 100644 index 0000000000..0a77e57fef --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_layer.c @@ -0,0 +1,378 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_layer.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include +#include + +#include + + +void test_create() { + layer_type * layer = layer_alloc(10,20); + test_assert_true( layer_is_instance( layer )); + layer_free( layer ); +} + + + +void get_invalid_layer_cell1(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_cell_value( layer , 100 , 100 ); +} + + +void get_invalid_layer_cell2(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_cell_value( layer , -100 , -100 ); +} + + +void test_get_invalid_cell() { + layer_type * layer = layer_alloc(10,10); + test_assert_util_abort( "layer_get_global_cell_index" , get_invalid_layer_cell1 , layer ); + test_assert_util_abort( "layer_get_global_cell_index" , get_invalid_layer_cell2 , layer ); + layer_free( layer ); +} + + +void test_get_cell() { + layer_type * layer = layer_alloc(10,10); + test_assert_int_equal( 0 , layer_iget_cell_value(layer , 0 ,0)); + test_assert_int_equal( 0 , layer_get_cell_sum( layer )); + layer_iset_cell_value( layer , 0 , 0 , 77 ); + test_assert_int_equal( 77 , layer_get_cell_sum( layer )); + test_assert_int_equal( 77 , layer_iget_cell_value(layer , 0 ,0)); + layer_iset_cell_value( layer , 1 , 1 , 23 ); + test_assert_int_equal( 100 , layer_get_cell_sum( layer )); + layer_iset_cell_value( layer , 0 , 0 , 0 ); + test_assert_int_equal( 23 , layer_get_cell_sum( layer )); + layer_free( layer ); +} + + + +void get_invalid_layer_edge1(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 10 , 10 , RIGHT_EDGE); +} + + +void get_invalid_layer_edge2(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 10 , 0, RIGHT_EDGE ); +} + + +void get_invalid_layer_edge3(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 10 , 0, BOTTOM_EDGE ); +} + + +void get_invalid_layer_edge4(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 0 , 10, TOP_EDGE ); +} + + +void get_invalid_layer_edge5(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 0 , 10, RIGHT_EDGE ); +} + + +void get_invalid_layer_edge6(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 0 , 10, LEFT_EDGE ); +} + + +void get_invalid_layer_edge7(void * arg) { + layer_type * layer = layer_safe_cast( arg ); + layer_iget_edge_value( layer , 10 , 0, TOP_EDGE ); +} + + +void test_get_invalid_edge() { + layer_type * layer = layer_alloc(10,10); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge1 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge2 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge3 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge4 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge5 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge6 , layer ); + test_assert_util_abort( "layer_get_global_edge_index" , get_invalid_layer_edge7 , layer ); + layer_free( layer ); +} + +void test_edge() { + layer_type * layer = layer_alloc(10,10); + + layer_iset_cell_value(layer , 2,2,100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , -100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , -100); + test_assert_true( layer_cell_on_edge( layer , 2 , 2 )); + + layer_iset_cell_value( layer , 3 , 2 , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , -100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , -100); + + test_assert_int_equal( layer_iget_edge_value(layer , 3 , 2 , LEFT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 3 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 3 , 2 , RIGHT_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 3 , 2 , TOP_EDGE) , -100); + + layer_iset_cell_value( layer , 1 , 2 , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , -100); + + test_assert_int_equal( layer_iget_edge_value(layer , 1 , 2 , LEFT_EDGE) , -100); + test_assert_int_equal( layer_iget_edge_value(layer , 1 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 1 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 1 , 2 , TOP_EDGE) , -100); + + layer_iset_cell_value( layer , 2 , 3 , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , 0); + + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 3 , LEFT_EDGE) , -100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 3 , BOTTOM_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 3 , RIGHT_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 3 , TOP_EDGE) , -100); + + + layer_iset_cell_value( layer , 2 , 1 , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) ,0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , 0); + + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 1 , LEFT_EDGE) , -100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 1 , BOTTOM_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 1 , RIGHT_EDGE) , 100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 1 , TOP_EDGE) , 0); + + layer_iset_cell_value(layer , 2,2,100); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 0); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , 0); + test_assert_false( layer_cell_on_edge( layer , 2 , 2 )); + + + layer_iset_cell_value(layer , 2,2,200); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , LEFT_EDGE) , -200); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , BOTTOM_EDGE) , 200); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , RIGHT_EDGE) , 200); + test_assert_int_equal( layer_iget_edge_value(layer , 2 , 2 , TOP_EDGE) , -200); + + + layer_free( layer ); +} + + +void test_walk() { + layer_type * layer = layer_alloc(10,10); + struct_vector_type * corner_list = struct_vector_alloc( sizeof(int_point2d_type)); + int_vector_type * cell_list = int_vector_alloc(0,0); + + test_assert_false( layer_trace_block_edge( layer , 4 , 4 , 100 , corner_list , cell_list)); + layer_iset_cell_value( layer , 4,4,100 ); + test_assert_false( layer_trace_block_edge( layer , 4 , 4 , 200 , corner_list , cell_list)); + + test_assert_true( layer_trace_block_edge( layer , 4 , 4 , 100 , corner_list , cell_list)); + test_assert_int_equal( struct_vector_get_size( corner_list ) , 4); + test_assert_int_equal( int_vector_size( cell_list ) , 1 ); + { + int_point2d_type point; + + struct_vector_iget( corner_list , 0 , &point); + test_assert_int_equal( 4 , point.i ); + test_assert_int_equal( 4 , point.j ); + + struct_vector_iget( corner_list , 1 , &point); + test_assert_int_equal( 5 , point.i ); + test_assert_int_equal( 4 , point.j ); + + struct_vector_iget( corner_list , 2 , &point); + test_assert_int_equal( 5 , point.i ); + test_assert_int_equal( 5 , point.j ); + + struct_vector_iget( corner_list , 3 , &point); + test_assert_int_equal( 4 , point.i ); + test_assert_int_equal( 5 , point.j ); + } + + { + int i,j; + int_vector_type * true_cell_list = int_vector_alloc(0,0); + for (j= 3; j < 7; j++) { + for (i = 3; i < 7; i++) { + layer_iset_cell_value( layer , i , j , 100 ); + + if (i == 3 || j == 3) + int_vector_append( true_cell_list , i + j*layer_get_nx( layer )); + + if (i == 6 || j == 6) + int_vector_append( true_cell_list , i + j*layer_get_nx( layer )); + + } + } + int_vector_select_unique( true_cell_list ); + + test_assert_true( layer_trace_block_edge( layer , 3 , 3 , 100 , corner_list , cell_list)); + test_assert_int_equal( 16 , struct_vector_get_size( corner_list )); + test_assert_int_equal( 12 , int_vector_size( cell_list )); + + int_vector_fprintf( cell_list , stdout , " cell_list" , "%3d"); + int_vector_fprintf( true_cell_list , stdout , "true_cell_list" , "%3d"); + + test_assert_true( int_vector_equal( cell_list , true_cell_list )); + int_vector_free( true_cell_list ); + } + + int_vector_free( cell_list ); + struct_vector_free( corner_list ); + layer_free( layer ); +} + + + +void test_content1() { + layer_type * layer = layer_alloc(10,10); + int i,j; + for (j=4; j < 8; j++) + for (i=4; i < 8; i++) + layer_iset_cell_value( layer , i , j , 1 ); + + test_assert_int_equal( 16 , layer_get_cell_sum( layer )); + { + int_vector_type * i_list = int_vector_alloc(0,0); + int_vector_type * j_list = int_vector_alloc(0,0); + + test_assert_false( layer_trace_block_content( layer , false , 4,4, 10 , i_list , j_list)); + test_assert_true( layer_trace_block_content( layer , false , 4,4, 1 , i_list , j_list )); + test_assert_int_equal( 16 , int_vector_size( i_list )); + + int_vector_sort( i_list ); + int_vector_sort( j_list ); + + for (j=0; j < 4; j++) + for (i = 0; i < 4; i++) { + test_assert_int_equal( int_vector_iget(i_list , i + j*4) , j + 4); + test_assert_int_equal( int_vector_iget(j_list , i + j*4) , j + 4); + } + + + test_assert_true( layer_trace_block_content( layer , false , 4,4, 0 , i_list , j_list )); + test_assert_int_equal( 16 , int_vector_size( i_list )); + + test_assert_true( layer_trace_block_content( layer ,true , 4,4, 0 , i_list , j_list )); + test_assert_int_equal( 16 , int_vector_size( i_list )); + test_assert_int_equal( 0 , layer_get_cell_sum( layer )); + + int_vector_free( i_list ); + int_vector_free( j_list ); + } + + layer_free( layer ); +} + + + +void test_content2() { + layer_type * layer = layer_alloc(5,5); + int i,j; + for (j=0; j < 5; j++) + layer_iset_cell_value( layer , 2 , j , 1 ); + + for (i=0; i < 5; i++) + layer_iset_cell_value( layer , i , 2 , 1 ); + + test_assert_int_equal( 9 , layer_get_cell_sum( layer )); + { + int_vector_type * i_list = int_vector_alloc(0,0); + int_vector_type * j_list = int_vector_alloc(0,0); + int_vector_type * cell_list = int_vector_alloc(0,0); + struct_vector_type * corner_list = struct_vector_alloc( sizeof(int_point2d_type) ); + + + for (j=0; j < 5; j++) { + for (i=0; i < 5; i++) { + int cell_value = layer_iget_cell_value( layer , i , j ); + + if (cell_value != 0) { + test_assert_true( layer_trace_block_edge( layer , i , j , cell_value , corner_list , cell_list)); + test_assert_true( layer_trace_block_content( layer , true , i,j,cell_value , i_list , j_list )); + } + + } + } + + struct_vector_free( corner_list ); + int_vector_free( i_list ); + int_vector_free( j_list ); + int_vector_free( cell_list ); + } + test_assert_int_equal( 0 , layer_get_cell_sum( layer )); + + + layer_free( layer ); +} + + + +void test_replace() { + layer_type * layer = layer_alloc(10,10); + int i,j; + for (j = 0; j < 5; j++) + for (i=0; i < 5; i++) + layer_iset_cell_value( layer , i , j , 1 ); + + test_assert_int_equal( 25 , layer_get_cell_sum( layer )); + test_assert_int_equal( layer_replace_cell_values( layer , 1 , 2 ) , 25 ); + test_assert_int_equal( 50 , layer_get_cell_sum( layer )); + test_assert_int_equal( layer_replace_cell_values( layer , 1 , 2 ) , 0 ); + + layer_free( layer ); +} + + + +int main(int argc , char ** argv) { + test_create(); + test_get_invalid_cell(); + test_get_cell(); + test_get_invalid_edge(); + test_edge(); + test_walk(); + test_content1(); + test_content2(); + test_replace(); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_layer_statoil.c b/ThirdParty/Ert/devel/libecl/tests/ecl_layer_statoil.c new file mode 100644 index 0000000000..9969aab104 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_layer_statoil.c @@ -0,0 +1,91 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_layer_statoil.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include + +#include +#include +#include + + +ecl_kw_type * alloc_faultblock_kw( const char * filename, int grid_size) { + FILE * stream = util_fopen( filename , "r"); + ecl_kw_type * kw = ecl_kw_fscanf_alloc_grdecl( stream , "FAULTBLK" , grid_size , ECL_INT_TYPE ); + fclose( stream ); + + return kw; +} + + +void test_layer( const ecl_grid_type * ecl_grid , const ecl_kw_type * faultblock_kw , int k) { + int nx = ecl_grid_get_nx(ecl_grid ); + int ny = ecl_grid_get_ny(ecl_grid ); + layer_type * layer = layer_alloc( nx , ny ); + int i,j; + + for (j=0; j < ny; j++) + for (i=0; i < nx; i++) { + int g = ecl_grid_get_global_index3( ecl_grid , i , j , k ); + int fblk = ecl_kw_iget_int( faultblock_kw , g ); + layer_iset_cell_value( layer , i , j , fblk ); + } + + { + struct_vector_type * corner_list = struct_vector_alloc( sizeof(int_point2d_type) ); + int_vector_type * i_list = int_vector_alloc(0,0); + int_vector_type * j_list = int_vector_alloc(0,0); + int_vector_type * cell_list = int_vector_alloc(0,0); + + for (j=0; j < ny; j++) { + for (i=0; i < nx; i++) { + int cell_value = layer_iget_cell_value( layer , i , j ); + if (cell_value != 0) { + test_assert_true( layer_trace_block_edge( layer , i , j , cell_value , corner_list , cell_list)); + test_assert_true( layer_trace_block_content( layer , true , i,j,cell_value , i_list , j_list )); + } + } + } + test_assert_int_equal( 0 , layer_get_cell_sum( layer )); + struct_vector_free( corner_list ); + int_vector_free( i_list ); + int_vector_free( j_list ); + int_vector_free( cell_list ); + } + + layer_free( layer ); +} + + + + +int main(int argc , char ** argv) { + ecl_grid_type * ecl_grid = ecl_grid_alloc( argv[1] ); + ecl_kw_type * faultblock_kw = alloc_faultblock_kw( argv[2] , ecl_grid_get_global_size( ecl_grid )); + int k; + + for (k=0; k < ecl_grid_get_nz( ecl_grid ); k++) + test_layer( ecl_grid , faultblock_kw , k ); + + + ecl_kw_free( faultblock_kw ); + ecl_grid_free( ecl_grid ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_info_test.c b/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_info_test.c index 5cf71c726c..70e5bd240b 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_info_test.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_info_test.c @@ -28,9 +28,52 @@ #include +void test_equal( ) { + int lgr_nr = 1; + nnc_info_type * nnc_info1 = nnc_info_alloc(lgr_nr); + nnc_info_type * nnc_info2 = nnc_info_alloc(lgr_nr); -int main(int argc , char ** argv) { + test_assert_false( nnc_info_equal( NULL , nnc_info1 )); + test_assert_false( nnc_info_equal( nnc_info1, NULL )); + + test_assert_true( nnc_info_equal( nnc_info1 , nnc_info2 )); + + + nnc_info_add_nnc(nnc_info1, lgr_nr, 3 , 0); + test_assert_false( nnc_info_equal( nnc_info1 , nnc_info2 )); + + nnc_info_add_nnc(nnc_info2, lgr_nr, 3 , 0); + test_assert_true( nnc_info_equal( nnc_info1 , nnc_info2 )); + + nnc_info_add_nnc( nnc_info1 , lgr_nr + 1 , 10 , 10 ); + nnc_info_add_nnc( nnc_info2 , lgr_nr + 2 , 11 , 11 ); + test_assert_false( nnc_info_equal( nnc_info1 , nnc_info2 )); + + nnc_info_add_nnc( nnc_info1 , lgr_nr + 2 , 11 , 11 ); + nnc_info_add_nnc( nnc_info2 , lgr_nr + 1 , 10 , 10 ); + test_assert_true( nnc_info_equal( nnc_info1 , nnc_info2 )); +} + + + +void test_copy( ) { + int lgr_nr = 1; + nnc_info_type * nnc_info1 = nnc_info_alloc(lgr_nr); + nnc_info_add_nnc( nnc_info1 , lgr_nr + 1 , 11 , 11 ); + nnc_info_add_nnc( nnc_info1 , lgr_nr + 2 , 11 , 11 ); + nnc_info_add_nnc( nnc_info1 , lgr_nr + 1 , 111 , 111 ); + + { + nnc_info_type * nnc_copy = nnc_info_alloc_copy( nnc_info1 ); + test_assert_true( nnc_info_equal( nnc_info1 , nnc_copy )); + nnc_info_free( nnc_copy ); + } + nnc_info_free( nnc_info1 ); +} + + +void basic_test() { int lgr_nr = 77; nnc_info_type * nnc_info = nnc_info_alloc(lgr_nr); @@ -70,7 +113,12 @@ int main(int argc , char ** argv) { test_assert_int_equal( 2 , nnc_info_get_size( nnc_info )); test_assert_ptr_equal( nnc_info_get_vector( nnc_info , 1 ) , nnc_info_iget_vector( nnc_info , 1 )); nnc_info_free(nnc_info); - +} + +int main(int argc , char ** argv) { + basic_test(); + test_equal(); + test_copy(); exit(0); } diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_vector.c b/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_vector.c index 5eef68b410..240ff29bb4 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_vector.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_nnc_vector.c @@ -23,8 +23,7 @@ #include - -int main(int argc , char ** argv) { +void test_basic() { int lgr_nr = 100; nnc_vector_type * vector = nnc_vector_alloc( lgr_nr ); @@ -56,5 +55,44 @@ int main(int argc , char ** argv) { } nnc_vector_free( vector ); +} + +void test_copy() { + int lgr_nr = 100; + nnc_vector_type * vector1 = nnc_vector_alloc( lgr_nr ); + nnc_vector_type * vector2 = nnc_vector_alloc( lgr_nr ); + nnc_vector_type * vector3 = NULL; + + test_assert_true( nnc_vector_equal( vector1 , vector2 )); + test_assert_false( nnc_vector_equal( vector1 , vector3 )); + test_assert_false( nnc_vector_equal( vector3 , vector1 )); + test_assert_true( nnc_vector_equal( vector3 , vector3 )); + + + nnc_vector_add_nnc( vector1 , 100 , 1); + nnc_vector_add_nnc( vector1 , 200 , 2); + test_assert_false( nnc_vector_equal( vector1 , vector2 )); + + nnc_vector_add_nnc( vector2 , 100 , 1); + nnc_vector_add_nnc( vector2 , 200 , 2); + test_assert_true( nnc_vector_equal( vector1 , vector2 )); + + nnc_vector_add_nnc( vector1 , 300 , 3); + nnc_vector_add_nnc( vector2 , 300 , 30); + test_assert_false( nnc_vector_equal( vector1 , vector2 )); + + vector3 = nnc_vector_alloc_copy( vector1 ); + test_assert_true( nnc_vector_is_instance( vector3 )); + test_assert_true( nnc_vector_equal( vector1 , vector3 )); + + nnc_vector_free( vector1 ); + nnc_vector_free( vector2 ); + nnc_vector_free( vector3 ); +} + + +int main(int argc , char ** argv) { + test_basic(); + test_copy(); exit(0); } diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_point.c b/ThirdParty/Ert/devel/libecl/tests/ecl_point.c new file mode 100644 index 0000000000..cb921b9bb1 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_point.c @@ -0,0 +1,117 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_sum_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include + +#include + + +void test_equal() { + point_type * p1 = point_alloc(1,1,1); + point_type * p2 = point_alloc(1,1,1); + point_type * p3 = point_alloc(1,1,1); + + + test_assert_true( point_equal( p1 , p2 )); + test_assert_true( point_equal( p1 , p3 )); + + point_shift(p2 , 1e-12 , 0,0); + test_assert_false( point_equal( p1 , p2 )); + point_copy_values(p2 , p3); + test_assert_true( point_equal( p1 , p2 )); + + point_shift(p2 , 0, 1e-12 ,0); + test_assert_false( point_equal( p1 , p2 )); + point_copy_values(p2 , p3); + test_assert_true( point_equal( p1 , p2 )); + + point_shift(p2 , 0, 0,-1e-12 ); + test_assert_false( point_equal( p1 , p2 )); + point_copy_values(p2 , p3); + test_assert_true( point_equal( p1 , p2 )); + + point_free( p1 ); + point_free( p2 ); + point_free( p3 ); +} + + + +void test_distancez() { + point_type * p0 = point_alloc(0,0,0); + point_type * p1 = point_alloc(1,0,0); + point_type * p2 = point_alloc(0,1,0); + + point_type * px = point_alloc(1,1,10); + + test_assert_double_equal( 10 , point3_plane_distance( p0, p1 , p2 , px )); + px->z = -1; + test_assert_double_equal( -1 , point3_plane_distance( p0, p1 , p2 , px )); + + point_free( p1 ); + point_free( p2 ); + point_free( p0 ); + point_free( px ); +} + + +void test_distancex() { + point_type * p0 = point_alloc(0,0,0); + point_type * p1 = point_alloc(0,1,0); + point_type * p2 = point_alloc(0,0,1); + + point_type * px = point_alloc(1,1,10); + + test_assert_double_equal( 1 , point3_plane_distance( p0, p1 , p2 , px )); + px->x = -7; + test_assert_double_equal( -7 , point3_plane_distance( p0, p1 , p2 , px )); + + point_free( p1 ); + point_free( p2 ); + point_free( p0 ); + point_free( px ); +} + + +void test_distancey() { + point_type * p0 = point_alloc(0,0,0); + point_type * p1 = point_alloc(0,0,2); + point_type * p2 = point_alloc(2,0,0); + + point_type * px = point_alloc(1,1,10); + + test_assert_double_equal( 1 , point3_plane_distance( p0, p1 , p2 , px )); + px->y = -7; + test_assert_double_equal( -7 , point3_plane_distance( p0, p1 , p2 , px )); + + point_free( p1 ); + point_free( p2 ); + point_free( p0 ); + point_free( px ); +} + + +int main(int argc , char ** argv) { + test_equal(); + test_distancex(); + test_distancey(); + test_distancez(); +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_tetrahedron_contains.c b/ThirdParty/Ert/devel/libecl/tests/ecl_tetrahedron_contains.c new file mode 100644 index 0000000000..58d6e0d0ef --- /dev/null +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_tetrahedron_contains.c @@ -0,0 +1,91 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ecl_tetrahedron_contains.c' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include + +#include + +#include +#include + + +void init_tet(tetrahedron_type * tet , point_type * point_list) { + point_set(&point_list[0] , 0 , 0 , 0); + point_set(&point_list[1] , 1 , 0 , 0); + point_set(&point_list[2] , 0 , 1 , 0); + point_set(&point_list[3] , 0 , 0 , 1); + + tetrahedron_init(tet , &point_list[0] , &point_list[1] , &point_list[2] , &point_list[3]); +} + + + + + +void test_inside(const tetrahedron_type * tet ) { + point_type p; + point_set(&p , 0.10 , 0.10 , 0.10); + test_assert_true( tetrahedron_contains( tet , &p )); +} + + +void test_i(const tetrahedron_type * tet ) { + point_type p; + point_set(&p , -10 , 0.10 , 0.10); + test_assert_false( tetrahedron_contains( tet , &p )); + + point_set(&p , 10 , 0.10 , 0.10); + test_assert_false( tetrahedron_contains( tet , &p )); +} + + +void test_j(const tetrahedron_type * tet ) { + point_type p; + point_set(&p , 0.10 , -10 , 0.10); + test_assert_false( tetrahedron_contains( tet , &p )); + + point_set(&p , 0.10 , 10 , 0.10); + test_assert_false( tetrahedron_contains( tet , &p )); +} + + +void test_k(const tetrahedron_type * tet ) { + point_type p; + point_set(&p , 0.25 , 0.15 , -10); + test_assert_false( tetrahedron_contains( tet , &p )); + + point_set(&p , 0.25 , 0.15 , 10); + test_assert_false( tetrahedron_contains( tet , &p )); +} + + + +int main(int argc , char ** argv) { + tetrahedron_type tet; + point_type point_list[4]; + + init_tet( &tet , point_list ); + + test_inside(&tet); + test_j(&tet); + test_i(&tet); + test_k(&tet); + +} diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_valid_basename.c b/ThirdParty/Ert/devel/libecl/tests/ecl_valid_basename.c index 7fcba4ba80..be484ddf18 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_valid_basename.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_valid_basename.c @@ -29,16 +29,23 @@ int main(int argc , char ** argv) { - test_assert_true( ecl_util_valid_basename("ECLIPSE.DATA")); test_assert_true( ecl_util_valid_basename("ECLIPS100.DATA")); test_assert_true( ecl_util_valid_basename("eclipse100.data")); + test_assert_true( ecl_util_valid_basename("MYPATH/ECLIPSE.DATA")); + test_assert_true( ecl_util_valid_basename("mypath/ECLIPSE.DATA")); test_assert_false( ecl_util_valid_basename("ECLiPS100.DATa")); + test_assert_false( ecl_util_valid_basename("mypath/eclipse.DATA")); test_assert_true( ecl_util_valid_basename_fmt("ECL_%d.DATA")); test_assert_true( ecl_util_valid_basename_fmt("ECL_%04d.DATA")); + test_assert_true( ecl_util_valid_basename_fmt("mypath/ECL_%04d.DATA")); + test_assert_true( ecl_util_valid_basename_fmt("MYPATH/ECL_%04d.DATA")); + test_assert_true( ecl_util_valid_basename_fmt("MYPATH/ECL_%04d.DATA")); test_assert_false( ecl_util_valid_basename_fmt("ECL_%d.dATA")); test_assert_false( ecl_util_valid_basename_fmt("ECL_%s.DATA")); + test_assert_false( ecl_util_valid_basename_fmt("mypath/ECL_%d.dATA")); + exit(0); } diff --git a/ThirdParty/Ert/devel/libecl/tests/tests.cmake b/ThirdParty/Ert/devel/libecl/tests/tests.cmake index 5bbdd770c4..bd7c8e525c 100644 --- a/ThirdParty/Ert/devel/libecl/tests/tests.cmake +++ b/ThirdParty/Ert/devel/libecl/tests/tests.cmake @@ -11,6 +11,10 @@ add_executable( ecl_restart_test ecl_restart_test.c ) target_link_libraries( ecl_restart_test ecl test_util ) add_test( ecl_restart_test ${EXECUTABLE_OUTPUT_PATH}/ecl_restart_test ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.UNRST ) +add_executable( ecl_kw_init ecl_kw_init.c ) +target_link_libraries( ecl_kw_init ecl test_util ) +add_test( ecl_kw_init ${EXECUTABLE_OUTPUT_PATH}/ecl_kw_init ) + add_executable( ecl_nnc_export ecl_nnc_export.c ) target_link_libraries( ecl_nnc_export ecl test_util ) add_test (ecl_nnc_export1 ${EXECUTABLE_OUTPUT_PATH}/ecl_nnc_export ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE ) @@ -49,10 +53,36 @@ target_link_libraries( ecl_grid_lgr_name ecl test_util ) set_target_properties( ecl_grid_lgr_name PROPERTIES COMPILE_FLAGS "-Werror") add_test( ecl_grid_lgr_name ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_lgr_name ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Troll/MSW_LGR/2BRANCHES-CCEWELLPATH-NEW-SCH-TUNED-AR3.EGRID) +add_executable( ecl_grid_create ecl_grid_create.c ) +target_link_libraries( ecl_grid_create ecl test_util ) +add_test( ecl_grid_create ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_create ) + add_executable( ecl_region ecl_region.c ) target_link_libraries( ecl_region ecl test_util ) add_test( ecl_region ${EXECUTABLE_OUTPUT_PATH}/ecl_region ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) +add_executable( ecl_grid_fwrite ecl_grid_fwrite.c ) +target_link_libraries( ecl_grid_fwrite ecl test_util ) +add_test( ecl_grid_fwrite ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_fwrite ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) + +add_executable( ecl_grid_cell_contains ecl_grid_cell_contains.c ) +target_link_libraries( ecl_grid_cell_contains ecl test_util ) +add_test( ecl_grid_cell_contains1 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_contains 1 ) +add_test( ecl_grid_cell_contains2 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_contains 2 ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) +add_test( ecl_grid_cell_contains3 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_contains 3 ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/FF12/FF12_2013B2.EGRID ) + +add_test( ecl_grid_cell_contains4 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_contains 4 ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Brazil/R3_ICD.EGRID ) + +add_executable( ecl_tetrahedron_contains ecl_tetrahedron_contains.c ) +target_link_libraries( ecl_tetrahedron_contains ecl test_util ) +add_test( ecl_tetrahedron_contains1 ${EXECUTABLE_OUTPUT_PATH}/ecl_tetrahedron_contains) + +add_executable( ecl_grid_cell_volume ecl_grid_cell_volume.c ) +target_link_libraries( ecl_grid_cell_volume ecl test_util ) +add_test( ecl_grid_cell_volume1 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_volume) +add_test( ecl_grid_cell_volume2 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_volume ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) +add_test( ecl_grid_cell_volume3 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_cell_volume ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Heidrun/Summary/FF12_2013B3_CLEAN_RS.EGRID ) + add_executable( ecl_region2region ecl_region2region_test.c ) target_link_libraries( ecl_region2region ecl test_util ) add_test( ecl_region2region ${EXECUTABLE_OUTPUT_PATH}/ecl_region2region ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/R2R/R2R.SMSPEC ) @@ -73,11 +103,36 @@ add_executable( ecl_grid_simple ecl_grid_simple.c ) target_link_libraries( ecl_grid_simple ecl test_util ) add_test( ecl_grid_simple ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_simple ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) + +add_executable( ecl_grid_DEPTHZ ecl_grid_DEPTHZ.c ) +target_link_libraries( ecl_grid_DEPTHZ ecl test_util ) +add_test( ecl_grid_DEPTHZ ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_DEPTHZ ) + +add_executable( ecl_grid_reset_actnum ecl_grid_reset_actnum.c ) +target_link_libraries( ecl_grid_reset_actnum ecl test_util ) +add_test( ecl_grid_reset_actnum ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_reset_actnum ) + +add_executable( ecl_grid_export ecl_grid_export.c ) +add_executable( ecl_grid_corner ecl_grid_corner.c ) +target_link_libraries( ecl_grid_corner ecl test_util ) +add_test( ecl_grid_corner ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_corner ) + + +target_link_libraries( ecl_grid_export ecl test_util ) +add_test( ecl_grid_export ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_export ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) + add_executable( ecl_grid_volume ecl_grid_volume.c ) target_link_libraries( ecl_grid_volume ecl test_util ) add_test( ecl_grid_volume1 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_volume ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE ) add_test( ecl_grid_volume2 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_volume ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/VolumeTest/TEST1 ) +# The grid volume test fails miserably on the test case given as example three; looking at +# the failures one could actually suspect that the ECLIPSE algorithm for PORV calculations +# has been different in this file - i.e. that the absolute value of the individual +# tetrahedron parts have been taken during the sum, and not at the end. At least the ert +# algorithm gets volumes ~ 0 whereas ECLIPSE reports ~10^9 for the same cell. +# add_test( ecl_grid_volume3 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_volume ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Heidrun/Summary/FF12_2013B3_CLEAN_RS) + add_executable( ecl_grid_dims ecl_grid_dims.c ) target_link_libraries( ecl_grid_dims ecl test_util ) @@ -107,6 +162,19 @@ add_executable( ecl_nnc_vector ecl_nnc_vector.c ) target_link_libraries( ecl_nnc_vector ecl test_util ) add_test(ecl_nnc_vector ${EXECUTABLE_OUTPUT_PATH}/ecl_nnc_vector ) +add_executable( ecl_point ecl_point.c ) +target_link_libraries( ecl_point ecl test_util ) +add_test(ecl_point ${EXECUTABLE_OUTPUT_PATH}/ecl_point ) + +add_executable( ecl_layer ecl_layer.c ) +target_link_libraries( ecl_layer ecl test_util ) +add_test(ecl_layer ${EXECUTABLE_OUTPUT_PATH}/ecl_layer ) + + +add_executable( ecl_layer_statoil ecl_layer_statoil.c ) +target_link_libraries( ecl_layer_statoil ecl test_util ) +add_test(ecl_layer_statoil ${EXECUTABLE_OUTPUT_PATH}/ecl_layer_statoil ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Mariner/MARINER.EGRID ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Mariner/faultblock.grdecl) + add_executable( ecl_kw_grdecl ecl_kw_grdecl.c ) target_link_libraries( ecl_kw_grdecl ecl test_util ) @@ -179,22 +247,55 @@ add_executable( ecl_rft_cell ecl_rft_cell.c ) target_link_libraries( ecl_rft_cell ecl test_util ) add_test( ecl_rft_cell ${EXECUTABLE_OUTPUT_PATH}/ecl_rft_cell ) -add_executable( ecl_get_num_cpu ecl_get_num_cpu_test.c ) -target_link_libraries( ecl_get_num_cpu ecl test_util ) -add_test( ecl_get_num_cpu ${EXECUTABLE_OUTPUT_PATH}/ecl_get_num_cpu ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu1 ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu2 ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu3) +add_executable( ecl_grid_copy ecl_grid_copy.c ) +target_link_libraries( ecl_grid_copy ecl test_util ) +add_test( ecl_grid_copy ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_copy ) + +add_executable( ecl_grid_copy_statoil ecl_grid_copy_statoil.c ) +target_link_libraries( ecl_grid_copy_statoil ecl test_util ) + +add_test( ecl_grid_copy_statoil1 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_copy_statoil ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID ) +add_test( ecl_grid_copy_statoil2 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_copy_statoil ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Mariner/MARINER.EGRID ) +add_test( ecl_grid_copy_statoil3 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_copy_statoil ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/LGCcase/LGC_TESTCASE2.EGRID ) -set_property( TEST ecl_fmt PROPERTY LABELS StatoilData ) -set_property( TEST ecl_coarse_test PROPERTY LABELS StatoilData ) -set_property( TEST ecl_restart_test PROPERTY LABELS StatoilData ) -set_property( TEST ecl_lgr_test1 PROPERTY LABELS StatoilData ) -set_property( TEST ecl_lgr_test2 PROPERTY LABELS StatoilData ) -set_property( TEST ecl_lgr_test3 PROPERTY LABELS StatoilData ) -set_property( TEST ecl_grid_lgr_name PROPERTY LABELS StatoilData ) -set_property( TEST ecl_grid_simple PROPERTY LABELS StatoilData ) -set_property( TEST ecl_dualp PROPERTY LABELS StatoilData ) -set_property( TEST ecl_sum_test PROPERTY LABELS StatoilData ) +add_test( ecl_grid_copy_statoil4 ${EXECUTABLE_OUTPUT_PATH}/ecl_grid_copy_statoil ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/10kcase/TEST10K_FLT_LGR_NNC.EGRID ) + + + +add_executable( ecl_get_num_cpu ecl_get_num_cpu_test.c ) +target_link_libraries( ecl_get_num_cpu ecl test_util ) +add_test( ecl_get_num_cpu ${EXECUTABLE_OUTPUT_PATH}/ecl_get_num_cpu + ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu1 + ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu2 + ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu3 + ${PROJECT_SOURCE_DIR}/libecl/tests/data/num_cpu4 ) + + +add_executable( ecl_fault_block_layer_statoil ecl_fault_block_layer_statoil.c ) +target_link_libraries( ecl_fault_block_layer_statoil ecl test_util ) +add_test( ecl_fault_block_layer_statoil ${EXECUTABLE_OUTPUT_PATH}/ecl_fault_block_layer_statoil + ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Mariner/MARINER.EGRID + ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Mariner/faultblock.grdecl) + + +add_executable( ecl_fault_block_layer ecl_fault_block_layer.c ) +target_link_libraries( ecl_fault_block_layer ecl test_util ) +add_test( ecl_fault_block_layer ${EXECUTABLE_OUTPUT_PATH}/ecl_fault_block_layer ) + +set_property( TEST ecl_fault_block_layer_statoil PROPERTY LABELS StatoilData ) +set_property( TEST ecl_fmt PROPERTY LABELS StatoilData ) +set_property( TEST ecl_coarse_test PROPERTY LABELS StatoilData ) +set_property( TEST ecl_restart_test PROPERTY LABELS StatoilData ) +set_property( TEST ecl_lgr_test1 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_lgr_test2 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_lgr_test3 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_lgr_name PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_simple PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_export PROPERTY LABELS StatoilData ) +set_property( TEST ecl_dualp PROPERTY LABELS StatoilData ) +set_property( TEST ecl_sum_test PROPERTY LABELS StatoilData ) set_property( TEST ecl_sum_report_step_equal1 PROPERTY LABELS StatoilData ) set_property( TEST ecl_sum_report_step_equal2 PROPERTY LABELS StatoilData ) @@ -224,6 +325,7 @@ set_property( TEST ecl_nnc_test3 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_test4 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_test5 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_fwrite PROPERTY LABELS StatoilData) set_property( TEST ecl_file PROPERTY LABELS StatoilData) set_property( TEST ecl_rsthead PROPERTY LABELS StatoilData) set_property( TEST ecl_region PROPERTY LABELS StatoilData) @@ -234,12 +336,22 @@ set_property( TEST ecl_rft_plt PROPERTY LABELS StatoilData) set_property( TEST ecl_sum_case_exists PROPERTY LABELS StatoilData) set_property( TEST ecl_grid_volume1 PROPERTY LABELS StatoilData) set_property( TEST ecl_grid_volume2 PROPERTY LABELS StatoilData) - +#set_property( TEST ecl_grid_volume3 PROPERTY LABELS StatoilData) +set_property( TEST ecl_grid_cell_contains2 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_cell_contains3 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_cell_contains4 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_cell_volume2 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_cell_volume3 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export1 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export2 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export3 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export4 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export5 PROPERTY LABELS StatoilData ) set_property( TEST ecl_nnc_export6 PROPERTY LABELS StatoilData ) - -set_property( TEST ecl_nnc_export_get_tran PROPERTY LABELS StatoilData ) \ No newline at end of file +set_property( TEST ecl_nnc_export_get_tran PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_cell_contains2 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_copy_statoil1 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_copy_statoil2 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_copy_statoil3 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_grid_copy_statoil4 PROPERTY LABELS StatoilData ) +set_property( TEST ecl_layer_statoil PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c b/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c index 65611e4201..6a776b35da 100644 --- a/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c +++ b/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c @@ -17,7 +17,7 @@ */ #include #include -#include +//#include #include #include @@ -41,7 +41,7 @@ int main(int argc , char ** argv) { ecl_rsthead_type * rst_head = ecl_rsthead_alloc( rst_file ); const ecl_kw_type * iwel_kw = ecl_file_iget_named_kw( rst_file , IWEL_KW , 0 ); const ecl_kw_type * iseg_kw = ecl_file_iget_named_kw( rst_file , ISEG_KW , 0 ); - const ecl_kw_type * rseg_kw = ecl_file_iget_named_kw( rst_file , RSEG_KW , 0 ); + well_rseg_loader_type * rseg_loader = well_rseg_loader_alloc(rst_file); const ecl_kw_type * icon_kw = ecl_file_iget_named_kw( rst_file , ICON_KW , 0 ); const ecl_kw_type * scon_kw = ecl_file_iget_named_kw( rst_file , SCON_KW , 0 ); const ecl_kw_type * zwel_kw = ecl_file_iget_named_kw( rst_file , ZWEL_KW , 0 ); @@ -58,7 +58,7 @@ int main(int argc , char ** argv) { well_conn_collection_type * connections = well_conn_collection_alloc(); well_segment_collection_type * segments = well_segment_collection_alloc(); - if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_kw , rst_head )) { + if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head )) { well_branch_collection_type * branches = well_branch_collection_alloc(); well_conn_collection_load_from_kw( connections , iwel_kw , icon_kw , scon_kw , well_nr , rst_head); diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h index 5e9aa711e8..33e17a55ee 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h @@ -35,11 +35,13 @@ extern "C" { void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst_file); void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr ); void well_info_load_rstfile( well_info_type * well_info , const char * filename); + void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * rst_file); void well_info_free( well_info_type * well_info ); well_ts_type * well_info_get_ts( const well_info_type * well_info , const char *well_name); int well_info_get_num_wells( const well_info_type * well_info ); const char * well_info_iget_well_name( const well_info_type * well_info, int well_index); + bool well_info_has_well( well_info_type * well_info , const char * well_name ); well_state_type * well_info_get_state_from_time( const well_info_type * well_info , const char * well_name , time_t sim_time); well_state_type * well_info_get_state_from_report( const well_info_type * well_info , const char * well_name , int report_step ); diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_rseg_loader.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_rseg_loader.h new file mode 100644 index 0000000000..edc22085d1 --- /dev/null +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_rseg_loader.h @@ -0,0 +1,42 @@ +/* + Copyright (C) 2011 Statoil ASA, Norway. + + The file 'well_info.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __WELL_RSEG_LOADER_H__ +#define __WELL_RSEG_LOADER_H__ + + +#ifdef __cplusplus +extern "C" { +#endif + +#include + + + typedef struct well_rseg_loader_struct well_rseg_loader_type; + + well_rseg_loader_type * well_rseg_loader_alloc(ecl_file_type * rst_file); + void well_rseg_loader_free(well_rseg_loader_type * well_rseg_loader); + + int well_rseg_loader_element_count(const well_rseg_loader_type * well_rseg_loader); + double * well_rseg_loader_load_values(const well_rseg_loader_type * well_rseg_loader, int rseg_offset); + +#ifdef __cplusplus +} +#endif + +#endif diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment.h index 983c1c8f61..fbfd6afa41 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment.h @@ -32,13 +32,14 @@ extern "C" { #include #include +#include typedef struct well_segment_struct well_segment_type; - well_segment_type * well_segment_alloc_from_kw( const ecl_kw_type * iseg_kw , const ecl_kw_type * rseg_kw , const ecl_rsthead_type * header , int well_nr, int segment_index , int segment_id); + well_segment_type * well_segment_alloc_from_kw( const ecl_kw_type * iseg_kw , const well_rseg_loader_type * rseg_loader , const ecl_rsthead_type * header , int well_nr, int segment_index , int segment_id); well_segment_type * well_segment_alloc(int segment_id , int outlet_segment_id , int branch_id , const double * rseg_data); void well_segment_free(well_segment_type * segment ); void well_segment_free__(void * arg); diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h index 2984135f91..5655a19c1f 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h @@ -32,7 +32,8 @@ extern "C" { #include #include #include - +#include + typedef struct well_segment_collection_struct well_segment_collection_type; well_segment_collection_type * well_segment_collection_alloc(); @@ -45,7 +46,7 @@ extern "C" { int well_segment_collection_load_from_kw( well_segment_collection_type * segment_collection , int well_nr , const ecl_kw_type * iwel_kw , const ecl_kw_type * iseg_kw , - const ecl_kw_type * rseg_kw , + const well_rseg_loader_type * rseg_loader , const ecl_rsthead_type * rst_head); void well_segment_collection_link(const well_segment_collection_type * segment_collection); void well_segment_collection_add_connections(well_segment_collection_type * segment_collection , diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h index 8481573e8c..ac144b52cd 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h @@ -62,7 +62,6 @@ extern "C" { const char * well_state_get_name( const well_state_type * well ); int well_state_get_report_nr( const well_state_type * well_state ); time_t well_state_get_sim_time( const well_state_type * well_state ); - well_conn_type * well_state_iget_connection( const well_state_type * well_state , int index); well_type_enum well_state_get_type( const well_state_type * well_state); bool well_state_is_open( const well_state_type * well_state ); int well_state_get_well_nr( const well_state_type * well_state ); diff --git a/ThirdParty/Ert/devel/libecl_well/src/CMakeLists.txt b/ThirdParty/Ert/devel/libecl_well/src/CMakeLists.txt index 88d84809de..3c1edaa604 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libecl_well/src/CMakeLists.txt @@ -1,5 +1,27 @@ -set( source_files well_state.c well_conn.c well_info.c well_ts.c well_conn_collection.c well_segment.c well_segment_collection.c well_branch_collection.c) -set( header_files well_state.h well_const.h well_conn.h well_info.h well_ts.h well_conn_collection.h well_segment.h well_segment_collection.h well_branch_collection.h) +set( source_files + well_state.c + well_conn.c + well_info.c + well_ts.c + well_conn_collection.c + well_segment.c + well_segment_collection.c + well_branch_collection.c + well_rseg_loader.c +) + +set( header_files + well_state.h + well_const.h + well_conn.h + well_info.h + well_ts.h + well_conn_collection.h + well_segment.h + well_segment_collection.h + well_branch_collection.h + well_rseg_loader.h +) if (NOT ERT_WINDOWS) set_property( SOURCE well_branch_collection.c well_segment.c well_segment_collection.c well_conn_collection.c well_conn.c PROPERTY COMPILE_FLAGS "-Werror") diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_info.c b/ThirdParty/Ert/devel/libecl_well/src/well_info.c index 4980c22ded..45bc8cfd08 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_info.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_info.c @@ -65,15 +65,15 @@ | | +----| |--------+---------------+---------------+ LGR1 | :| |: : | | | - +···+| |+···+···+ | (2,2) | + +���+| |+���+���+ | (2,2) | | :| |: : | | | - +···+| |+···+···+ | | + +���+| |+���+���+ | | | :| |: : | | | +----| |--------+---------------+---------------+ | :| |: : | | : : : | - +···+| \__________________________________ -+---+ LGR2 + +���+| \__________________________________ -+---+ LGR2 | :\______________ ___________________| : | - +···+···+···+···+ | | +---+---+---+---+ + +���+���+���+���+ | | +---+---+---+---+ | : : : | | | | : : : | +---------------+---| |---------+---------------+ | | | | | | @@ -274,14 +274,24 @@ static void well_info_add_state( well_info_type * well_info , well_state_type * */ void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr) { - int well_nr; - ecl_rsthead_type * global_header = ecl_rsthead_alloc( rst_file ); - for (well_nr = 0; well_nr < global_header->nwells; well_nr++) { - well_state_type * well_state = well_state_alloc_from_file( rst_file , well_info->grid , report_nr , well_nr ); - if (well_state != NULL) - well_info_add_state( well_info , well_state ); + int flags = ecl_file_get_flags(rst_file); + if (ecl_file_flags_set(rst_file, ECL_FILE_CLOSE_STREAM)) { + int new_flags = flags & ~ECL_FILE_CLOSE_STREAM; + ecl_file_set_flags(rst_file, new_flags); } - ecl_rsthead_free( global_header ); + + { + ecl_rsthead_type * global_header = ecl_rsthead_alloc( rst_file ); + int well_nr; + for (well_nr = 0; well_nr < global_header->nwells; well_nr++) { + well_state_type * well_state = well_state_alloc_from_file( rst_file , well_info->grid , report_nr , well_nr ); + if (well_state != NULL) + well_info_add_state( well_info , well_state ); + } + ecl_rsthead_free( global_header ); + } + + ecl_file_set_flags(rst_file, flags); } /** @@ -317,22 +327,27 @@ void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst */ void well_info_load_rstfile( well_info_type * well_info , const char * filename) { + ecl_file_type * ecl_file = ecl_file_open( filename , 0); + well_info_load_rst_eclfile(well_info, ecl_file); + ecl_file_close( ecl_file ); +} + + +void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * ecl_file) { int report_nr; + const char* filename = ecl_file_get_src_file(ecl_file); ecl_file_enum file_type = ecl_util_get_file_type( filename , NULL , &report_nr); if ((file_type == ECL_RESTART_FILE) || (file_type == ECL_UNIFIED_RESTART_FILE)) { - ecl_file_type * ecl_file = ecl_file_open( filename , 0); - if (file_type == ECL_RESTART_FILE) well_info_add_wells( well_info , ecl_file , report_nr ); else well_info_add_UNRST_wells( well_info , ecl_file ); - - ecl_file_close( ecl_file ); + } else - util_abort("%s: invalid file type:%s - must be a restart file\n",__func__ , filename); -} + util_abort("%s: invalid file type: %s - must be a restart file\n", __func__ , filename); +} void well_info_free( well_info_type * well_info ) { hash_free( well_info->wells ); diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_rseg_loader.c b/ThirdParty/Ert/devel/libecl_well/src/well_rseg_loader.c new file mode 100644 index 0000000000..b0d7f5c61d --- /dev/null +++ b/ThirdParty/Ert/devel/libecl_well/src/well_rseg_loader.c @@ -0,0 +1,90 @@ +/* + Copyright (C) 2011 Statoil ASA, Norway. + + The file 'well_info.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include + +#include +#include + +#include +#include + +#include +#include + +#include + + +struct well_rseg_loader_struct { + ecl_file_type * rst_file; + int_vector_type * relative_index_map; + int_vector_type * absolute_index_map; + char * buffer; + char * kw; +}; + + +well_rseg_loader_type * well_rseg_loader_alloc(ecl_file_type * rst_file) { + well_rseg_loader_type * loader = util_malloc(sizeof * loader); + + int element_count = 4; + + loader->rst_file = rst_file; + loader->relative_index_map = int_vector_alloc(0, 0); + loader->absolute_index_map = int_vector_alloc(0, 0); + loader->buffer = util_malloc(element_count * sizeof(double)); + loader->kw = RSEG_KW; + + int_vector_append(loader->relative_index_map, RSEG_DEPTH_INDEX); + int_vector_append(loader->relative_index_map, RSEG_LENGTH_INDEX); + int_vector_append(loader->relative_index_map, RSEG_TOTAL_LENGTH_INDEX); + int_vector_append(loader->relative_index_map, RSEG_DIAMETER_INDEX); + + return loader; +} + +int well_rseg_loader_element_count(const well_rseg_loader_type * well_rseg_loader) { + return int_vector_size(well_rseg_loader->relative_index_map); +} + + +void well_rseg_loader_free(well_rseg_loader_type * loader) { + if(ecl_file_flags_set(loader->rst_file, ECL_FILE_CLOSE_STREAM)) { + ecl_file_close_fortio_stream(loader->rst_file); + } + + int_vector_free(loader->relative_index_map); + int_vector_free(loader->absolute_index_map); + free(loader->buffer); + free(loader); +} + +double * well_rseg_loader_load_values(const well_rseg_loader_type * loader, int rseg_offset) { + int_vector_type * index_map = loader->absolute_index_map; + + int index = 0; + for(index = 0; index < int_vector_size(loader->relative_index_map); index++) { + int relative_index = int_vector_iget(loader->relative_index_map, index); + int_vector_iset(index_map, index, relative_index + rseg_offset); + } + + ecl_file_indexed_read(loader->rst_file, loader->kw, 0, index_map, loader->buffer); + + return (double*) loader->buffer; +} + diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_segment.c b/ThirdParty/Ert/devel/libecl_well/src/well_segment.c index 174eb374e3..db5ff70225 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_segment.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_segment.c @@ -63,17 +63,24 @@ well_segment_type * well_segment_alloc(int segment_id , int outlet_segment_id , segment->outlet_segment = NULL; segment->connections = hash_alloc(); - segment->depth = rseg_data[ RSEG_DEPTH_INDEX ]; - segment->length = rseg_data[ RSEG_LENGTH_INDEX ]; - segment->total_length = rseg_data[ RSEG_TOTAL_LENGTH_INDEX ]; - segment->diameter = rseg_data[ RSEG_DIAMETER_INDEX ]; + segment->depth = 0.0; + segment->length = 0.0; + segment->total_length = 0.0; + segment->diameter = 0.0; + + if(rseg_data != NULL) { + segment->depth = rseg_data[ RSEG_DEPTH_INDEX ]; + segment->length = rseg_data[ RSEG_LENGTH_INDEX ]; + segment->total_length = rseg_data[ RSEG_TOTAL_LENGTH_INDEX ]; + segment->diameter = rseg_data[ RSEG_DIAMETER_INDEX ]; + } return segment; } -well_segment_type * well_segment_alloc_from_kw( const ecl_kw_type * iseg_kw , const ecl_kw_type * rseg_kw , const ecl_rsthead_type * header , int well_nr, int segment_index , int segment_id) { - if (rseg_kw == NULL) { +well_segment_type * well_segment_alloc_from_kw( const ecl_kw_type * iseg_kw , const well_rseg_loader_type * rseg_loader , const ecl_rsthead_type * header , int well_nr, int segment_index , int segment_id) { + if (rseg_loader == NULL) { util_abort("%s: fatal internal error - tried to create well_segment instance without RSEG keyword.\n",__func__); return NULL; } else { @@ -81,9 +88,13 @@ well_segment_type * well_segment_alloc_from_kw( const ecl_kw_type * iseg_kw , co const int rseg_offset = header->nrsegz * ( header->nsegmx * well_nr + segment_index); int outlet_segment_id = ecl_kw_iget_int( iseg_kw , iseg_offset + ISEG_OUTLET_ITEM ) - ECLIPSE_WELL_SEGMENT_OFFSET + WELL_SEGMENT_OFFSET ; // -1 int branch_id = ecl_kw_iget_int( iseg_kw , iseg_offset + ISEG_BRANCH_ITEM ) - ECLIPSE_WELL_BRANCH_OFFSET + WELL_BRANCH_OFFSET ; // -1 - const double * rseg_data = ecl_kw_iget_ptr( rseg_kw , rseg_offset ); - - well_segment_type * segment = well_segment_alloc( segment_id , outlet_segment_id , branch_id , rseg_data); + const double * rseg_data = well_rseg_loader_load_values(rseg_loader, rseg_offset); + + well_segment_type * segment = well_segment_alloc( segment_id , outlet_segment_id , branch_id , NULL); + segment->depth = rseg_data[0]; + segment->length = rseg_data[1]; + segment->total_length = rseg_data[2]; + segment->diameter = rseg_data[3]; return segment; } } diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c b/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c index 9757d14886..c41e583af0 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c @@ -103,7 +103,7 @@ bool well_segment_collection_has_segment( const well_segment_collection_type * int well_segment_collection_load_from_kw( well_segment_collection_type * segment_collection , int well_nr , const ecl_kw_type * iwel_kw , const ecl_kw_type * iseg_kw , - const ecl_kw_type * rseg_kw , + const well_rseg_loader_type * rseg_loader , const ecl_rsthead_type * rst_head) { int iwel_offset = rst_head->niwelz * well_nr; @@ -114,7 +114,7 @@ int well_segment_collection_load_from_kw( well_segment_collection_type * segment int segment_index; for (segment_index = 0; segment_index < rst_head->nsegmx; segment_index++) { int segment_id = segment_index + WELL_SEGMENT_OFFSET; - well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_kw , rst_head , segment_well_nr , segment_index , segment_id ); + well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_loader , rst_head , segment_well_nr , segment_index , segment_id ); if (well_segment_active( segment )) { well_segment_collection_add( segment_collection , segment ); diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_state.c b/ThirdParty/Ert/devel/libecl_well/src/well_state.c index e37551eb72..f85c720412 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_state.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_state.c @@ -43,6 +43,7 @@ #include #include #include +#include /* @@ -375,26 +376,18 @@ bool well_state_add_MSW( well_state_type * well_state , ecl_rsthead_type * rst_head = ecl_rsthead_alloc( rst_file ); const ecl_kw_type * iwel_kw = ecl_file_iget_named_kw( rst_file , IWEL_KW , 0); const ecl_kw_type * iseg_kw = ecl_file_iget_named_kw( rst_file , ISEG_KW , 0); - ecl_kw_type * rseg_kw = NULL; + well_rseg_loader_type * rseg_loader = NULL; int segments; - if (ecl_file_has_kw( rst_file , RSEG_KW )) - /* - Here we check that the file has the RSEG_KW keyword, and pass - NULL if not. The rseg_kw pointer will later be used in - well_segment_collection_load_from_kw() where we test if this - is a MSW well. If this indeed is a MSW well the rseg_kw - pointer will be used unchecked, if it is then NULL => Crash - and burn. - */ - rseg_kw = ecl_file_iget_named_kw( rst_file , RSEG_KW , 0); + if (ecl_file_has_kw( rst_file , RSEG_KW )) + rseg_loader = well_rseg_loader_alloc(rst_file); segments = well_segment_collection_load_from_kw( well_state->segments , well_nr , iwel_kw , iseg_kw , - rseg_kw , + rseg_loader , rst_head); if (segments) { @@ -409,6 +402,11 @@ bool well_state_add_MSW( well_state_type * well_state , well_segment_collection_add_branches( well_state->segments , well_state->branches ); } ecl_rsthead_free( rst_head ); + + if(rseg_loader != NULL) { + well_rseg_loader_free(rseg_loader); + } + return true; } else return false; diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c index 8e6e891e37..f25551a98a 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c @@ -33,6 +33,7 @@ #include #include #include +#include int main(int argc , char ** argv) { @@ -41,7 +42,7 @@ int main(int argc , char ** argv) { ecl_rsthead_type * rst_head = ecl_rsthead_alloc( rst_file ); const ecl_kw_type * iwel_kw = ecl_file_iget_named_kw( rst_file , IWEL_KW , 0 ); const ecl_kw_type * iseg_kw = ecl_file_iget_named_kw( rst_file , ISEG_KW , 0 ); - const ecl_kw_type * rseg_kw = ecl_file_iget_named_kw( rst_file , RSEG_KW , 0 ); + well_rseg_loader_type * rseg_loader = well_rseg_loader_alloc(rst_file); const ecl_kw_type * icon_kw = ecl_file_iget_named_kw( rst_file , ICON_KW , 0 ); const ecl_kw_type * scon_kw = NULL; @@ -56,7 +57,7 @@ int main(int argc , char ** argv) { { well_segment_collection_type * segments = well_segment_collection_alloc(); - if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_kw , rst_head )) { + if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head )) { well_branch_collection_type * branches = well_branch_collection_alloc(); test_assert_true( well_segment_well_is_MSW( well_nr , iwel_kw , rst_head)); diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c index d660f1da9f..99c4427244 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c @@ -30,6 +30,7 @@ #include #include #include +#include int main(int argc , char ** argv) { @@ -38,8 +39,8 @@ int main(int argc , char ** argv) { ecl_rsthead_type * rst_head = ecl_rsthead_alloc( rst_file ); const ecl_kw_type * iwel_kw = ecl_file_iget_named_kw( rst_file , IWEL_KW , 0 ); const ecl_kw_type * iseg_kw = ecl_file_iget_named_kw( rst_file , ISEG_KW , 0 ); - const ecl_kw_type * rseg_kw = ecl_file_iget_named_kw( rst_file , RSEG_KW , 0 ); - + well_rseg_loader_type * rseg_loader = well_rseg_loader_alloc(rst_file); + test_install_SIGNALS(); test_assert_not_NULL( rst_file ); test_assert_not_NULL( rst_head ); @@ -57,7 +58,7 @@ int main(int argc , char ** argv) { for (segment_index = 0; segment_index < rst_head->nsegmx; segment_index++) { int segment_id = segment_index + WELL_SEGMENT_OFFSET; - well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_kw , rst_head , seg_well_nr , segment_index , segment_id ); + well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_loader , rst_head , seg_well_nr , segment_index , segment_id ); test_assert_true( well_segment_is_instance( segment )); @@ -73,7 +74,7 @@ int main(int argc , char ** argv) { { well_segment_collection_type * segments2 = well_segment_collection_alloc(); - test_assert_int_equal( well_segment_collection_load_from_kw( segments2 , well_nr , iwel_kw , iseg_kw , rseg_kw , rst_head ) , + test_assert_int_equal( well_segment_collection_load_from_kw( segments2 , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head ) , well_segment_collection_get_size( segments)); well_segment_collection_link( segments ); diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/clean.py b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/clean.py deleted file mode 100644 index a42f7fed96..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/clean.py +++ /dev/null @@ -1,36 +0,0 @@ -# Copyright (C) 2011 Statoil ASA, Norway. -# -# The file 'clean.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. - - -import os, sys -def pyc_clean(dir): - findcmd = 'find %s -name "*.pyc" -print' % dir - count = 0 - for f in os.popen(findcmd).readlines(): - count += 1 - - # try / except here in case user does not have permission to remove old .pyc files - try: - os.remove(str(f[:-1])) - except: - pass - - print "Removed %d .pyc files" % count - -if __name__ == "__main__": - script_path = os.path.abspath(__file__) - prefix = os.path.dirname(script_path) - pyc_clean("%s/../code" % (prefix)) diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gdbcommands b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gdbcommands deleted file mode 100644 index d4410bb26d..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gdbcommands +++ /dev/null @@ -1 +0,0 @@ -run $ert_gui_dir/main.py "$CONFIG_FILE" \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gert b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gert deleted file mode 100644 index b7878a3c89..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/gert +++ /dev/null @@ -1,14 +0,0 @@ -#!/bin/bash -export ERT_SITE_CONFIG=/project/res/etc/ERT/site-config -BASEDIR=$(dirname $0) -export PYTHONPATH=~/ert/ert/devel/python/python:$BASEDIR/../lib:$PYTHONPATH -export GERT_SHARE_PATH=$BASEDIR/../share -export LD_LIBRARY_PATH=~/ert/ert/build/lib64:$LD_LIBRARY_PATH -ert_gui_dir=$BASEDIR/../lib/ert_gui/ - -echo "Loading python GUI code from.......:" $ert_gui_dir -echo "-----------------------------------------------------------------" - - -python $ert_gui_dir/gert_main.py "$1" - diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.py b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.py deleted file mode 100644 index a5424b4f75..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.py +++ /dev/null @@ -1,52 +0,0 @@ -#!/prog/sdpsoft/python2.4/bin/python -# Copyright (C) 2011 Statoil ASA, Norway. -# -# The file 'install.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. - - -import sys -import os.path -import os -import re -from stat import * -import shutil -sys.path += ["../../../../python/ctypes/SDP"] -import SDP - -################################################################# - -(SDP_ROOT , RH) = SDP.get_SDP_ROOT() -python_root = "%s/lib/python" % SDP_ROOT -lib_root = "%s/lib/python/lib" % SDP_ROOT - -SDP.install_file("../../../../libutil/slib/libutil.so" , "%s/libutil.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libecl/slib/libecl.so" , "%s/libecl.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../librms/slib/librms.so" , "%s/librms.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libenkf/slib/libenkf.so" , "%s/libenkf.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libconfig/slib/libconfig.so" , "%s/libconfig.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libjob_queue/slib/libjob_queue.so" , "%s/libjob_queue.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libplot/slib/libplot.so" , "%s/libplot.so" % lib_root , strict_exists = False) -SDP.install_file("../../../../libsched/slib/libsched.so" , "%s/libsched.so" % lib_root , strict_exists = False) - -SDP.make_dir( "%s/gert" % python_root ) -SDP.install_path( "code" , "%s/gert" % python_root , root = "../" , extensions = ["py"]) -SDP.install_path( "help" , "%s/gert" % python_root , root = "../" ) -SDP.install_path( "img" , "%s/gert" % python_root , root = "../" ) -SDP.install_path( "doc" , "%s/gert" % python_root , root = "../" ) - -SDP.make_dir( "%s/gert/bin" % python_root ) -SDP.install_file( "gert" , "%s/bin/gert" % SDP_ROOT) -SDP.install_file( "gdbcommands" , "%s/bin/gdbcommands" % SDP_ROOT) - diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.sh b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.sh deleted file mode 100644 index 13938828f2..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/install.sh +++ /dev/null @@ -1,73 +0,0 @@ -#!/bin/sh - - -destination=$1 -script_dir=$(dirname $0) - -if [ -z "$destination" ] -then - destination=/d/proj/bg/enkf/ERT_GUI - echo "Will install to default installation directory:" $destination -fi - -ert_gui_dir=$script_dir/.. - - -rm -rf $destination/code -rm -rf $destination/bin -rm -rf $destination/img -rm -rf $destination/help - -cp -rf $ert_gui_dir/code $destination/ -cp -rf $ert_gui_dir/bin $destination/ -cp -rf $ert_gui_dir/img $destination/ -cp -rf $ert_gui_dir/help $destination/ -find $destination -name ".svn" -type d -exec rm -rf {} + -find $destination -name "*.pyc" -exec rm -rf {} + - -chgrp -R enkf_h $destination/code -chgrp -R enkf_h $destination/bin -chgrp -R enkf_h $destination/img -chgrp -R enkf_h $destination/help - -chmod a+rx -R $destination/code -chmod a+rx -R $destination/bin -chmod a+rx -R $destination/img -chmod a+rx -R $destination/help - -chmod g+w -R $destination/code -chmod g+w -R $destination/bin -chmod g+w -R $destination/img -chmod g+w -R $destination/help - - -if [ -n "$ERT_HOME" ] -then - # Can NOT unconditionally remove the ERT_HOME/lib directory because it - # will in addition contain links to other external libraries (like LSF). - - if [ ! -d "$destination/lib" ] - then - echo "Trying to create directory" - mkdir $destination/lib - fi - - cp -fv $ERT_HOME/libenkf/slib/libenkf.so $destination/lib - cp -fv $ERT_HOME/libconfig/slib/libconfig.so $destination/lib - cp -fv $ERT_HOME/libecl/slib/libecl.so $destination/lib - cp -fv $ERT_HOME/libsched/slib/libsched.so $destination/lib - cp -fv $ERT_HOME/libutil/slib/libutil.so $destination/lib - cp -fv $ERT_HOME/librms/slib/librms.so $destination/lib - cp -fv $ERT_HOME/libjob_queue/slib/libjob_queue.so $destination/lib - ln -s /prog/LSF/7.0/linux2.6-glibc2.3-x86_64/lib/liblsf.so $destination/lib/liblsf.so - ln -s /prog/LSF/7.0/linux2.6-glibc2.3-x86_64/lib/libbat.so $destination/lib/libbat.so - chmod a+rwx -R $destination/lib -else - echo "ERT_HOME not set - did not install shared libraries" -fi - - - -echo -echo "The GUI for ERT has been installed in: $destination." -echo \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/remove_lock_files.sh b/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/remove_lock_files.sh deleted file mode 100644 index 5bc4a31660..0000000000 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_gui/bin/remove_lock_files.sh +++ /dev/null @@ -1,12 +0,0 @@ -#!/bin/sh - - -target=$1 - -if [ -z "target" ] -then - target=. - echo "Will remove lock files from current directory." -fi - -find $target -name "*.lock_*" -type d -exec rm -rf {} + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_export.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_export.c index 17d88f2a8f..22e85e8045 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_export.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_export.c @@ -85,7 +85,7 @@ void enkf_tui_export_field(const enkf_main_type * enkf_main , field_file_format_ { const field_type * field = enkf_node_value_ptr(node); - field_export(field , filename , NULL , file_type , output_transform); + field_export(field , filename , NULL , file_type , output_transform, NULL); } free(filename); } else @@ -462,7 +462,7 @@ void enkf_tui_export_fieldP(void * arg) { free( path ); } } - field_export(sum_field , export_file , NULL , RMS_ROFF_FILE , false); + field_export(sum_field , export_file , NULL , RMS_ROFF_FILE , false, NULL); } else fprintf(stderr,"Warning: no data found \n"); } diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_fs.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_fs.c index f9eb40a480..8a6fd4529a 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_fs.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_fs.c @@ -174,8 +174,8 @@ static void enkf_tui_fs_copy_ensemble__( { /* If the current target_case does not exist it is automatically created by the select_write_dir function */ - enkf_fs_type * src_fs = enkf_main_mount_alt_fs( enkf_main , source_case , true , false ); - enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_case , false, true ); + enkf_fs_type * src_fs = enkf_main_mount_alt_fs( enkf_main , source_case , false ); + enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_case , true ); stringlist_type * nodes; @@ -211,9 +211,9 @@ static void enkf_tui_fs_copy_ensemble__( enkf_node_copy_ensemble(config_node, src_fs , target_fs , report_step_from, state_from, report_step_to , state_to , ens_size , ranking_permutation); } } - - enkf_fs_umount( src_fs ); - enkf_fs_umount( target_fs ); + + enkf_fs_decref( src_fs ); + enkf_fs_decref( target_fs ); msg_free(msg , true); stringlist_free(nodes); @@ -242,12 +242,11 @@ void enkf_tui_fs_initialize_case_from_copy(void * arg) source_case = enkf_tui_fs_alloc_existing_case( enkf_main , "Initialize from case" , prompt_len); if (source_case != NULL) { - char * ranking_key = NULL; - bool_vector_type * iens_mask = bool_vector_alloc( 0 , true ); - src_step = util_scanf_int_with_limits("Source report step",prompt_len , 0 , last_report); - src_state = enkf_tui_util_scanf_state("Source analyzed/forecast [A|F]" , prompt_len , false); - enkf_main_initialize_from_existing( enkf_main , source_case , src_step , src_state , iens_mask , ranking_key ); - bool_vector_free( iens_mask ); + src_step = util_scanf_int_with_limits("Source report step",prompt_len , 0 , last_report); + src_state = enkf_tui_util_scanf_state("Source analyzed/forecast [A|F]" , prompt_len , false); + enkf_fs_type * source_fs = enkf_main_mount_alt_fs( enkf_main , source_case , false ); + enkf_main_init_current_case_from_existing(enkf_main, source_fs , src_step , src_state); + enkf_fs_decref(source_fs); } util_safe_free( source_case ); } diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_plot.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_plot.c index 4a4620a0f9..78610ba3c7 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_plot.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_plot.c @@ -1179,7 +1179,7 @@ void enkf_tui_plot_RFT_time(void * arg) { char * obs_key; int report_step; obs_vector_type * obs_vector; - enkf_config_node_type * config_node; + const enkf_config_node_type * config_node; int step1 , step2; int iens1 , iens2; state_enum plot_state; diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_ranking.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_ranking.c index 0c2760cccd..1c9f850210 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_ranking.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_ranking.c @@ -22,6 +22,7 @@ #include #include #include +#include #include #include @@ -44,7 +45,7 @@ static void enkf_tui_ranking_make_misfit_ensemble( void * arg) { misfit_ensemble_type * misfit_ensemble = enkf_fs_get_misfit_ensemble( fs ); - misfit_ensemble_update( misfit_ensemble , ensemble_config , enkf_obs , fs , ens_size , history_length ); + misfit_ensemble_initialize( misfit_ensemble , ensemble_config , enkf_obs , fs , ens_size , history_length , false); { menu_item_type * obs_item = arg_pack_iget_ptr( arg_pack , 1 ); menu_item_enable( obs_item ); @@ -85,13 +86,18 @@ static void enkf_tui_ranking_create_obs( void * arg ) { util_printf_prompt(store_prompt , prompt_len , '=' , "=> "); ranking_file = util_alloc_stdin_line(); + + char * report_steps = util_alloc_sprintf("%d-%d", step1, step2); + int_vector_type * steps_vector = string_util_alloc_value_list(report_steps); if (stringlist_get_size( ranking_keys ) > 0) { - ranking_table_add_misfit_ranking( ranking_table , misfit_ensemble , ranking_keys , step1 , step2 , ranking_key ); + ranking_table_add_misfit_ranking( ranking_table , misfit_ensemble , ranking_keys , steps_vector, ranking_key ); ranking_table_display_ranking( ranking_table , ranking_key); } else fprintf(stderr,"The input string : \"%s\" did not resolve to any valid observation keys \n", obs_keys_input); + free(report_steps); + int_vector_free(steps_vector); free( obs_keys_input ); stringlist_free( ranking_keys ); free( ranking_key ); diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c index ad4a4804ec..3cef72a78b 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c @@ -65,8 +65,7 @@ static void enkf_tui_run_set_runpath(void * arg) { void enkf_tui_run_start(void * enkf_main) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); - bool_vector_type * iactive = bool_vector_alloc(0,true); - bool_vector_iset( iactive , ens_size - 1 , true ); + bool_vector_type * iactive = bool_vector_alloc(ens_size , true); enkf_main_run_assimilation(enkf_main , iactive , 0 , 0 , ANALYZED); @@ -111,7 +110,7 @@ void enkf_tui_run_smoother(void * arg) { enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc( ens_size , true ); - enkf_main_run_smoother(enkf_main , "AUTO-SMOOTHER" , iactive , true ); + enkf_main_run_smoother(enkf_main , "AUTO-SMOOTHER" , iactive , 0 , true ); bool_vector_free( iactive ); } @@ -119,23 +118,13 @@ void enkf_tui_run_smoother(void * arg) { void enkf_tui_run_iterated_ES(void * arg) { enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); - enkf_main_run_iterated_ES(enkf_main); -} - -void enkf_tui_run_one_more_iteration(void * arg){ - enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); - const ecl_config_type * ecl_config = enkf_main_get_ecl_config( enkf_main ); - const int last_report = enkf_main_get_history_length( enkf_main ); - int step2; - if (ecl_config_has_schedule( ecl_config )) - step2 = util_scanf_int_with_limits("Last report",PROMPT_LEN , 0 , last_report); - else - step2 = last_report; - enkf_main_run_one_more_iteration(enkf_main, step2); + const analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + analysis_iter_config_type * iter_config = analysis_config_get_iter_config(analysis_config); + int num_iter = analysis_iter_config_get_num_iterations(iter_config); + enkf_main_run_iterated_ES(enkf_main , num_iter ); } - /** Experiments will always start with the parameters at time == 0; if you want to simulate with updated (posterior) parameters, you @@ -145,8 +134,6 @@ void enkf_tui_run_one_more_iteration(void * arg){ Prediction part is included if it exists. */ - - void enkf_tui_run_exp(void * enkf_main) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); @@ -207,18 +194,14 @@ static void enkf_tui_display_load_msg( int iens , const stringlist_type * msg_li void enkf_tui_run_manual_load__( void * arg ) { - enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - const int last_report = -1; - const int ens_size = enkf_main_get_ensemble_size( enkf_main ); - int step1,step2; + enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc( 0 , false ); - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + int iter = 0; enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - - step1 = 0; - step2 = last_report; /** Observe that for the summary data it will load all the available data anyway. */ + { char * prompt = util_alloc_sprintf("Which realizations to load (Ex: 1,3-5) [M to return to menu] : [ensemble size:%d] : " , ens_size); char * select_string; @@ -231,63 +214,61 @@ void enkf_tui_run_manual_load__( void * arg ) { free( prompt ); } + { + const model_config_type * model_config = enkf_main_get_model_config( enkf_main ); + if (model_config_runpath_requires_iter( model_config )) { + const char * prompt = "Which iteration to load from [0...?) : "; + char * input; + bool OK; + util_printf_prompt(prompt , PROMPT_LEN , '=' , "=> "); + input = util_alloc_stdin_line(); + if (input == NULL) + return; - if (bool_vector_count_equal( iactive , true )) { - int iens; - arg_pack_type ** arg_list = util_calloc( ens_size , sizeof * arg_list ); - thread_pool_type * tp = thread_pool_alloc( 4 , true ); /* num_cpu - HARD coded. */ + OK = util_sscanf_int( input , &iter ); - for (iens = 0; iens < ens_size; iens++) { - arg_pack_type * arg_pack = arg_pack_alloc(); - arg_list[iens] = arg_pack; - - if (bool_vector_iget(iactive , iens)) { - enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); - - arg_pack_append_ptr( arg_pack , enkf_state); /* 0: */ - arg_pack_append_ptr( arg_pack , fs ); /* 1: */ - arg_pack_append_int( arg_pack , step1 ); /* 2: This will be the load start parameter for the run_info struct. */ - arg_pack_append_int( arg_pack , step1 ); /* 3: Step1 */ - arg_pack_append_int( arg_pack , step2 ); /* 4: Step2 For summary data it will load the whole goddamn thing anyway.*/ - arg_pack_append_bool( arg_pack , true ); /* 5: Interactive */ - arg_pack_append_owned_ptr( arg_pack , stringlist_alloc_new() , stringlist_free__); /* 6: List of interactive mode messages. */ - thread_pool_add_job( tp , enkf_state_load_from_forward_model_mt , arg_pack); - - } + free( input ); + if (!OK) + return; + } + } + + + if (bool_vector_count_equal( iactive , true )) { + stringlist_type ** realizations_msg_list = util_calloc( ens_size , sizeof * realizations_msg_list ); + int iens = 0; + for (; iens < ens_size; ++iens) { + realizations_msg_list[iens] = stringlist_alloc_new(); } - - thread_pool_join( tp ); - thread_pool_free( tp ); - printf("\n"); + + enkf_main_load_from_forward_model(enkf_main, iter , iactive, realizations_msg_list); { qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); runpath_list_type * runpath_list = qc_module_get_runpath_list( qc_module ); - for (iens = 0; iens < ens_size; iens++) { + for (iens = 0; iens < ens_size; ++iens) { if (bool_vector_iget(iactive , iens)) { const enkf_state_type * state = enkf_main_iget_state( enkf_main , iens ); - runpath_list_add( runpath_list , iens , enkf_state_get_run_path( state ) , enkf_state_get_eclbase( state )); + runpath_list_add( runpath_list , iens , iter, enkf_state_get_run_path( state ) , enkf_state_get_eclbase( state )); } } - qc_module_export_runpath_list( qc_module ); } - for (iens = 0; iens < ens_size; iens++) { - if (bool_vector_iget(iactive , iens)) { - stringlist_type * msg_list = arg_pack_iget_ptr( arg_list[iens] , 6 ); - if (stringlist_get_size( msg_list )) + for (iens = 0; iens < ens_size; ++iens) { + stringlist_type * msg_list = realizations_msg_list[iens]; + if (bool_vector_iget(iactive, iens)) { + if (stringlist_get_size( msg_list )) { enkf_tui_display_load_msg( iens , msg_list ); + } } + stringlist_free(msg_list); } - - - for (iens = 0; iens < ens_size; iens++) - arg_pack_free( arg_list[iens]); - free( arg_list ); + free(realizations_msg_list); } + bool_vector_free( iactive ); } @@ -313,14 +294,14 @@ void enkf_tui_run_menu(void * arg) { menu_add_separator( menu ); { const ecl_config_type * ecl_config = enkf_main_get_ecl_config( enkf_main ); - const model_config_type * model_config = enkf_main_get_model_config( enkf_main ); const analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + const enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + menu_item_type * enkf_item = menu_add_item(menu , "Start EnKF run from beginning" , "sS" , enkf_tui_run_start , enkf_main , NULL); menu_item_type * restart_enkf_item = menu_add_item(menu , "Restart EnKF run from arbitrary state" , "rR" , enkf_tui_run_restart__ , enkf_main , NULL); menu_item_type * ES_item = menu_add_item(menu , "Integrated smoother update" , "iI" , enkf_tui_run_smoother , enkf_main , NULL); menu_item_type * it_ES_item = menu_add_item(menu , "Iterated smoother [RML-EnKF]" , "tT" , enkf_tui_run_iterated_ES , enkf_main , NULL); - menu_item_type * one_more_item = menu_add_item(menu , "One more iteration (disabled)" , "mM" , enkf_tui_run_one_more_iteration , enkf_main , NULL); if (!ecl_config_has_schedule( ecl_config )) { menu_item_disable( enkf_item ); @@ -330,20 +311,17 @@ void enkf_tui_run_menu(void * arg) { if (!ecl_config_has_init_section( ecl_config )) menu_item_disable( enkf_item ); - menu_item_disable( one_more_item ); if (!analysis_config_get_module_option(analysis_config , ANALYSIS_ITERABLE)) { menu_item_disable( it_ES_item ); - menu_item_disable( one_more_item ); } else { menu_item_disable( enkf_item ); menu_item_disable( restart_enkf_item ); menu_item_disable( ES_item ); } - if (!model_config_has_history( model_config )) { + if (!enkf_obs_have_obs( enkf_obs )) { menu_item_disable( it_ES_item ); menu_item_disable( ES_item ); - menu_item_disable( one_more_item ); } } menu_add_separator(menu); diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_workflow.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_workflow.c index 0f10689acd..620045d4e3 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_workflow.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_workflow.c @@ -3,7 +3,7 @@ The file 'enkf_tui_workflow.c' is part of ERT - Ensemble based Reservoir Tool. - ERT is free software: you can redistribute it and/or modify + ERT is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. @@ -53,7 +53,7 @@ void enkf_tui_workflow_run( void * arg ) { char * workflow_name = util_alloc_stdin_line(); if (workflow_name != NULL) { if (ert_workflow_list_has_workflow( workflow_list , workflow_name )) { - bool runOK = ert_workflow_list_run_workflow( workflow_list , workflow_name , enkf_main); + bool runOK = ert_workflow_list_run_workflow_blocking( workflow_list , workflow_name , enkf_main); if (!runOK) { printf("Errors in workflow:%s \n", workflow_name ); printf("-----------------------------------------------------------------\n"); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_config.h index 4e167846f9..3a37cb2e33 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_config.h @@ -43,11 +43,13 @@ typedef struct analysis_config_struct analysis_config_type; analysis_iter_config_type * analysis_config_get_iter_config( const analysis_config_type * config ); analysis_module_type * analysis_config_get_module( analysis_config_type * config , const char * module_name ); +bool analysis_config_has_module( analysis_config_type * config , const char * module_name ); void analysis_config_load_internal_module( analysis_config_type * config , const char * user_name , const char * symbol_table ); void analysis_config_load_internal_modules( analysis_config_type * analysis ); void analysis_config_reload_module( analysis_config_type * config , const char * module_name); bool analysis_config_get_module_option( const analysis_config_type * config , long flag); bool analysis_config_load_external_module( analysis_config_type * config , const char * user_name , const char * lib_name); +void analysis_config_load_all_external_modules_from_config ( analysis_config_type * analysis_config, const config_type * config); stringlist_type * analysis_config_alloc_module_names( analysis_config_type * config ); const char * analysis_config_get_log_path( const analysis_config_type * config ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_iter_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_iter_config.h index 5392d59ba6..abd36f6325 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_iter_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/analysis_iter_config.h @@ -28,17 +28,18 @@ typedef struct analysis_iter_config_struct analysis_iter_config_type; void analysis_iter_config_set_num_iterations( analysis_iter_config_type * config , int num_iterations); int analysis_iter_config_get_num_iterations( const analysis_iter_config_type * config ); + void analysis_iter_config_set_num_retries_per_iteration( analysis_iter_config_type * config , int num_retries); + int analysis_iter_config_get_num_retries_per_iteration( const analysis_iter_config_type * config ); void analysis_iter_config_set_case_fmt( analysis_iter_config_type * config, const char * case_fmt); char * analysis_iter_config_get_case_fmt( analysis_iter_config_type * config); analysis_iter_config_type * analysis_iter_config_alloc(); void analysis_iter_config_free( analysis_iter_config_type * config ); const char * analysis_iter_config_iget_case( analysis_iter_config_type * config , int iter); - const char * analysis_iter_config_iget_runpath_fmt( analysis_iter_config_type * config , int iter); void analysis_iter_config_add_config_items( config_type * config ); void analysis_iter_config_init(analysis_iter_config_type * iter_config , const config_type * config); - void analysis_iter_config_set_runpath_fmt( analysis_iter_config_type * config , const char * runpath_fmt); - char * analysis_iter_config_get_runpath_fmt( analysis_iter_config_type * config); - + bool analysis_iter_config_case_fmt_set( const analysis_iter_config_type * config ); + bool analysis_iter_config_num_iterations_set( const analysis_iter_config_type * config ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/block_obs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/block_obs.h index 3316d518a7..1281309ebb 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/block_obs.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/block_obs.h @@ -44,17 +44,22 @@ typedef struct block_obs_struct block_obs_type; } block_obs_source_type; - block_obs_type * block_obs_alloc(const char * obs_label, - block_obs_source_type source_type , - const stringlist_type * summary_keys , + block_obs_type * block_obs_alloc_complete(const char * obs_label, + block_obs_source_type source_type , + const stringlist_type * summary_keys , + const void * data_config , + const ecl_grid_type * grid , + int size, + const int * i, + const int * j, + const int * k, + const double * obs_value, + const double * obs_std); + + block_obs_type * block_obs_alloc(const char * obs_key, const void * data_config , - const ecl_grid_type * grid , - int size, - const int * i, - const int * j, - const int * k, - const double * obs_value, - const double * obs_std); + const ecl_grid_type * grid); + void block_obs_free( block_obs_type * block_obs); @@ -62,18 +67,21 @@ void block_obs_free( block_obs_type * block_obs_alloc_from_BLOCK_OBSERVATION(const conf_instance_type * conf_instance, const history_type * history); - +double block_obs_iget_depth( const block_obs_type * block_obs , int index); int block_obs_iget_i(const block_obs_type * , int index); int block_obs_iget_j(const block_obs_type * , int index); int block_obs_iget_k(const block_obs_type * , int index); int block_obs_get_size(const block_obs_type * ); void block_obs_iget(const block_obs_type * block_obs, int , double * , double * ); +double block_obs_iget_value(const block_obs_type * block_obs, int index ); +double block_obs_iget_std(const block_obs_type * block_obs, int index ); void block_obs_iget_ijk(const block_obs_type * block_obs , int block_nr , int * i , int * j , int * k); +double block_obs_iget_data( const block_obs_type * block_obs, const void * state , int iobs , node_id_type node_id ); void block_obs_scale_std(block_obs_type * block_obs, double scale_factor); void block_obs_scale_std__(void * block_obs, double scale_factor); - - +void block_obs_append_field_obs( block_obs_type * block_obs , int i , int j , int k , double value , double std); +void block_obs_append_summary_obs( block_obs_type * block_obs , int i , int j , int k , const char * sum_key , double value , double std); VOID_FREE_HEADER(block_obs); VOID_GET_OBS_HEADER(block_obs); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/config_keys.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/config_keys.h index 5f1edd8358..0e7973a889 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/config_keys.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/config_keys.h @@ -24,27 +24,29 @@ extern "C" { #endif /* These keys are used as options in KEY:VALUE statements */ +#define BASE_SURFACE_KEY "BASE_SURFACE" +#define DEFINE_KEY "DEFINE" +#define DYNAMIC_KEY "DYNAMIC" +#define ECL_FILE_KEY "ECL_FILE" #define FORWARD_INIT_KEY "FORWARD_INIT" -#define MIN_STD_KEY "MIN_STD" +#define GENERAL_KEY "GENERAL" +#define INCLUDE_KEY "INCLUDE" #define INIT_FILES_KEY "INIT_FILES" -#define KEY_KEY "KEY" -#define TEMPLATE_KEY "TEMPLATE" -#define RESULT_FILE_KEY "RESULT_FILE" -#define ECL_FILE_KEY "ECL_FILE" +#define INIT_TRANSFORM_KEY "INIT_TRANSFORM" #define INPUT_FORMAT_KEY "INPUT_FORMAT" -#define OUTPUT_FORMAT_KEY "OUTPUT_FORMAT" -#define OUTPUT_FILE_KEY "OUTPUT_FILE" +#define INPUT_TRANSFORM_KEY "INPUT_TRANSFORM" +#define KEY_KEY "KEY" #define MAX_KEY "MAX" #define MIN_KEY "MIN" -#define INPUT_TRANSFORM_KEY "INPUT_TRANSFORM" -#define INIT_TRANSFORM_KEY "INIT_TRANSFORM" +#define MIN_STD_KEY "MIN_STD" +#define OUTPUT_FILE_KEY "OUTPUT_FILE" +#define OUTPUT_FORMAT_KEY "OUTPUT_FORMAT" #define OUTPUT_TRANSFORM_KEY "OUTPUT_TRANSFORM" -#define DYNAMIC_KEY "DYNAMIC" #define PARAMETER_KEY "PARAMETER" -#define GENERAL_KEY "GENERAL" -#define INCLUDE_KEY "INCLUDE" -#define DEFINE_KEY "DEFINE" -#define BASE_SURFACE_KEY "BASE_SURFACE" +#define REPORT_STEPS_KEY "REPORT_STEPS" +#define RESULT_FILE_KEY "RESULT_FILE" +#define TEMPLATE_KEY "TEMPLATE" + #define ADD_FIXED_LENGTH_SCHEDULE_KW_KEY "ADD_FIXED_LENGTH_SCHEDULE_KW" #define ANALYSIS_COPY_KEY "ANALYSIS_COPY" @@ -80,11 +82,13 @@ extern "C" { #define ENSPATH_KEY "ENSPATH" #define ITER_CASE_KEY "ITER_CASE" #define ITER_COUNT_KEY "ITER_COUNT" +#define ITER_RETRY_COUNT_KEY "ITER_RETRY_COUNT" #define FIELD_KEY "FIELD" #define FORWARD_MODEL_KEY "FORWARD_MODEL" #define GEN_DATA_KEY "GEN_DATA" #define GEN_KW_KEY "GEN_KW" #define GEN_KW_TAG_FORMAT_KEY "GEN_KW_TAG_FORMAT" +#define GEN_KW_EXPORT_FILE_KEY "GEN_KW_EXPORT_FILE" #define GEN_PARAM_KEY "GEN_PARAM" #define GRID_KEY "GRID" #define HISTORY_SOURCE_KEY "HISTORY_SOURCE" @@ -94,6 +98,7 @@ extern "C" { #define IMAGE_VIEWER_KEY "IMAGE_VIEWER" #define INIT_SECTION_KEY "INIT_SECTION" #define INSTALL_JOB_KEY "INSTALL_JOB" +#define INSTALL_JOB_DIRECTORY_KEY "INSTALL_JOB_DIRECTORY" #define JOB_SCRIPT_KEY "JOB_SCRIPT" #define JOBNAME_KEY "JOBNAME" #define KEEP_RUNPATH_KEY "KEEP_RUNPATH" @@ -170,6 +175,8 @@ extern "C" { #define LOAD_WORKFLOW_JOB_KEY "LOAD_WORKFLOW_JOB" #define STOP_LONG_RUNNING_KEY "STOP_LONG_RUNNING" #define MAX_RUNTIME_KEY "MAX_RUNTIME" +#define TIME_MAP_KEY "TIME_MAP" + #define CONFIG_BOOL_STRING( var ) (var) ? "TRUE" : "FALSE" diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container.h index 8225975c61..e2b97efb73 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container.h @@ -29,6 +29,8 @@ extern "C" { void container_add_node(container_type * container , void * child_node ); const void * container_iget_node(const container_type * container , int index); + int container_get_size( const container_type * container ); + void container_assert_size( const container_type * container ); VOID_ALLOC_HEADER(container); VOID_FREE_HEADER(container); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container_config.h index 619b6b99a5..b5dd54518e 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/container_config.h @@ -37,12 +37,12 @@ extern "C" { const void * container_config_iget_node(const container_config_type * container_config , int index); int container_config_get_size( const container_config_type * container_config ); - + UTIL_IS_INSTANCE_HEADER(container_config); UTIL_SAFE_CAST_HEADER_CONST(container_config); GET_DATA_SIZE_HEADER(container); VOID_GET_DATA_SIZE_HEADER(container); VOID_CONFIG_FREE_HEADER(container); - + #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ecl_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ecl_config.h index 34650476aa..4530587dc1 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ecl_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ecl_config.h @@ -43,7 +43,7 @@ extern "C" { void ecl_config_set_data_file( ecl_config_type * ecl_config , const char * data_file); ui_return_type * ecl_config_validate_data_file(const ecl_config_type * ecl_config, const char * data_file); - void ecl_config_set_schedule_file(ecl_config_type * ecl_config, const char * schedule_file); + void ecl_config_set_schedule_file(ecl_config_type * ecl_config, const char * schedule_file, const char * schedule_target_file); ui_return_type * ecl_config_validate_schedule_file(const ecl_config_type * ecl_config , const char * schedule_file); const char * ecl_config_get_schedule_file( const ecl_config_type * ecl_config ); const char * ecl_config_get_schedule_target(const ecl_config_type * ); @@ -104,7 +104,9 @@ extern "C" { void ecl_config_fprintf_config( const ecl_config_type * ecl_config , FILE * stream ); ecl_config_type * ecl_config_alloc( ); void ecl_config_add_config_items( config_type * config ); - + const char * ecl_config_get_depth_unit( const ecl_config_type * ecl_config ); + const char * ecl_config_get_pressure_unit( const ecl_config_type * ecl_config ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_analysis.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_analysis.h index 2e76a2668a..d6a8877db3 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_analysis.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_analysis.h @@ -44,6 +44,8 @@ void enkf_analysis_deactivate_outliers(obs_data_type * obs_data , double std_cutoff , double alpha); +void enkf_analysis_deactivate_std_zero(obs_data_type * obs_data , + meas_data_type * meas_data); #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_config_node.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_config_node.h index 15568a322b..f4877b1aea 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_config_node.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_config_node.h @@ -24,6 +24,8 @@ extern "C" { #include +#include + #include #include @@ -42,20 +44,67 @@ extern "C" { bool enkf_config_node_has_vector( const enkf_config_node_type * node , enkf_fs_type * fs , int iens , state_enum state); bool enkf_config_node_has_node( const enkf_config_node_type * node , enkf_fs_type * fs , node_id_type node_id); - enkf_config_node_type * enkf_config_node_new_gen_data( const char * key, bool forward_init ); bool enkf_config_node_vector_storage( const enkf_config_node_type * config_node); - void enkf_config_node_update_gen_data( enkf_config_node_type * config_node, - gen_data_file_format_type input_format, - gen_data_file_format_type output_format, - const char * init_file_fmt , - const char * template_ecl_file , - const char * template_data_key , - const char * enkf_outfile_fmt , - const char * enkf_infile_fmt , - const char * min_std_file); + enkf_config_node_type * enkf_config_node_new_GEN_PARAM( const char * key , bool forward_init); + enkf_config_node_type * enkf_config_node_new_GEN_DATA( const char * key , bool forward_init); + + void enkf_config_node_update_min_std( enkf_config_node_type * config_node , const char * min_std_file ); + + enkf_config_node_type * enkf_config_node_alloc_GEN_PARAM( const char * node_key , + bool forward_init , + gen_data_file_format_type input_format , + gen_data_file_format_type output_format , + const char * init_file_fmt , + const char * ert_outfile_fmt); + + + enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_state( const char * key, + bool forward_init , + gen_data_file_format_type input_format, + gen_data_file_format_type output_format, + const char * init_file_fmt , + const char * template_ecl_file , + const char * template_data_key , + const char * enkf_outfile_fmt , + const char * enkf_infile_fmt , + const char * min_std_file); + + + + enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_result( const char * key , + gen_data_file_format_type input_format, + const char * enkf_infile_fmt ); + + + + + void enkf_config_node_update_GEN_PARAM( enkf_config_node_type * config_node, + gen_data_file_format_type input_format, + gen_data_file_format_type output_format, + const char * init_file_fmt , + const char * template_ecl_file , + const char * template_data_key , + const char * enkf_outfile_fmt , + const char * min_std_file); + + + void enkf_config_node_update_GEN_DATA_result( enkf_config_node_type * config_node, + gen_data_file_format_type input_format, + const char * enkf_infile_fmt ); + void enkf_config_node_update_GEN_DATA_state( enkf_config_node_type * config_node, + gen_data_file_format_type input_format, + gen_data_file_format_type output_format, + const char * init_file_fmt , + const char * template_ecl_file , + const char * template_data_key , + const char * enkf_outfile_fmt , + const char * enkf_infile_fmt , + const char * min_std_file); + + enkf_config_node_type * enkf_config_node_new_surface( const char * key , bool forward_init); @@ -116,7 +165,7 @@ extern "C" { /*****************************************************************/ enkf_config_node_type * enkf_config_node_new_gen_kw( const char * key , const char * tag_fmt , bool forward_init); - enkf_config_node_type * enkf_config_node_new_field( const char * key , ecl_grid_type * ecl_grid, field_trans_table_type * trans_table, bool forward_init); + enkf_config_node_type * enkf_config_node_alloc_field( const char * key , ecl_grid_type * ecl_grid, field_trans_table_type * trans_table, bool forward_init); bool enkf_config_node_is_valid( const enkf_config_node_type * config_node ); int enkf_config_node_get_data_size( const enkf_config_node_type * node , int report_step); char * enkf_config_node_alloc_infile(const enkf_config_node_type * , int ); @@ -161,8 +210,15 @@ extern "C" { bool enkf_config_node_use_forward_init(const enkf_config_node_type * config_node); void enkf_config_node_set_forward_init(enkf_config_node_type * config_node, bool forward_init); - + /*****************************************************************/ + + void enkf_config_node_add_GEN_DATA_config_schema( config_type * config ); + void enkf_config_node_add_GEN_PARAM_config_schema( config_type * config ); + enkf_config_node_type * enkf_config_node_alloc_GEN_PARAM_from_config( const config_content_node_type * config_node ); + enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_from_config( const config_content_node_type * node ); + +UTIL_IS_INSTANCE_HEADER( enkf_config_node ); UTIL_SAFE_CAST_HEADER(enkf_config_node); VOID_FREE_HEADER(enkf_config_node); #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_defaults.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_defaults.h index a3ffa69aeb..8b51a6d9e3 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_defaults.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_defaults.h @@ -24,6 +24,12 @@ #define DEFAULT_GEN_KW_TAG_FORMAT "<%s>" +/** + Default file name for export file for GEN_KW parameters +*/ +#define DEFAULT_GEN_KW_EXPORT_FILE "parameters.txt" + + /** The format string used when creating search strings from user input with the 'DATA_KW' keyword. The format string must contain one '%s' @@ -122,6 +128,7 @@ #define DEFAULT_ANALYSIS_MIN_REALISATIONS 0 // 0: No lower limit #define DEFAULT_ANALYSIS_STOP_LONG_RUNNING false #define DEFAULT_MAX_RUNTIME 0 +#define DEFAULT_ITER_RETRY_COUNT 4 /* Default directories. */ diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h index 6f9450a349..a72b944359 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h @@ -42,16 +42,14 @@ extern "C" { const char * enkf_fs_get_root_path( const enkf_fs_type * fs ); const char * enkf_fs_get_case_name( const enkf_fs_type * fs ); bool enkf_fs_is_read_only(const enkf_fs_type * fs); - void enkf_fs_set_writable(enkf_fs_type * fs); - void enkf_fs_fsync( enkf_fs_type * fs ); void enkf_fs_add_index_node(enkf_fs_type * , int , int , const char * , enkf_var_type, ert_impl_type); - - int enkf_fs_get_refcount( const enkf_fs_type * fs ); + enkf_fs_type * enkf_fs_get_ref( enkf_fs_type * fs ); - enkf_fs_type * enkf_fs_get_weakref( enkf_fs_type * fs ); - void enkf_fs_umount( enkf_fs_type * fs ); - enkf_fs_type * enkf_fs_mount( const char * path , bool read_only); + int enkf_fs_decref( enkf_fs_type * fs ); + int enkf_fs_incref( enkf_fs_type * fs ); + int enkf_fs_get_refcount( const enkf_fs_type * fs ); + enkf_fs_type * enkf_fs_mount( const char * path ); int enkf_fs_get_version104( const char * path ); void enkf_fs_fwrite_node(enkf_fs_type * enkf_fs , buffer_type * buffer , const char * node_key, enkf_var_type var_type, int report_step , int iens , state_enum state); @@ -63,7 +61,7 @@ extern "C" { int iens , state_enum state); - bool enkf_fs_exists( const char * path ); + bool enkf_fs_exists( const char * mount_point ); void enkf_fs_fread_node(enkf_fs_type * enkf_fs , buffer_type * buffer , const char * node_key , enkf_var_type var_type , @@ -100,6 +98,7 @@ extern "C" { FILE * enkf_fs_open_excase_tstep_file( const enkf_fs_type * fs , const char * input_name , int tstep ); FILE * enkf_fs_open_excase_member_file( const enkf_fs_type * fs , const char * input_name , int iens ); + time_map_type * enkf_fs_alloc_readonly_time_map( const char * mount_point ); state_map_type * enkf_fs_alloc_readonly_state_map( const char * mount_point ); state_map_type * enkf_fs_get_state_map( const enkf_fs_type * fs ); time_map_type * enkf_fs_get_time_map( const enkf_fs_type * fs ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_macros.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_macros.h index 783f511674..693b3abb01 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_macros.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_macros.h @@ -26,9 +26,9 @@ extern "C" { #include #include -#include #include #include +#include #include #include @@ -37,6 +37,7 @@ extern "C" { #include #include #include +#include #define CONFIG_STD_FIELDS \ @@ -109,13 +110,13 @@ void * prefix ## _alloc__(const void *void_config) { #define VOID_READ_FROM_BUFFER(prefix) \ - void prefix ## _read_from_buffer__(void * void_arg , buffer_type * buffer , int report_step, state_enum state) { \ + void prefix ## _read_from_buffer__(void * void_arg , buffer_type * buffer , enkf_fs_type * fs, int report_step, state_enum state) { \ prefix ## _type * arg = prefix ## _safe_cast( void_arg ); \ - prefix ## _read_from_buffer(arg , buffer , report_step, state); \ + prefix ## _read_from_buffer(arg , buffer , fs, report_step, state); \ } #define VOID_WRITE_TO_BUFFER_HEADER(prefix) bool prefix ## _write_to_buffer__(const void * , buffer_type * , int , state_enum); -#define VOID_READ_FROM_BUFFER_HEADER(prefix) void prefix ## _read_from_buffer__(void * , buffer_type * , int, state_enum); +#define VOID_READ_FROM_BUFFER_HEADER(prefix) void prefix ## _read_from_buffer__(void * , buffer_type * , enkf_fs_type * , int, state_enum); #define VOID_FLOAD(prefix) \ bool prefix ## _fload__(void * void_arg , const char * filename) { \ @@ -128,12 +129,12 @@ bool prefix ## _fload__(void * void_arg , const char * filename) { /*****************************************************************/ #define VOID_ECL_WRITE(prefix) \ -void prefix ## _ecl_write__(const void * void_arg , const char * path , const char * file , fortio_type * restart_fortio) { \ +void prefix ## _ecl_write__(const void * void_arg , const char * path , const char * file , void * filestream) { \ const prefix ## _type * arg = prefix ## _safe_cast_const( void_arg ); \ - prefix ## _ecl_write(arg , path , file , restart_fortio); \ + prefix ## _ecl_write(arg , path , file , filestream); \ } -#define VOID_ECL_WRITE_HEADER(prefix) void prefix ## _ecl_write__(const void * , const char * , const char * , fortio_type *); +#define VOID_ECL_WRITE_HEADER(prefix) void prefix ## _ecl_write__(const void * , const char * , const char * , void *); /*****************************************************************/ @@ -148,12 +149,12 @@ bool prefix ## _forward_load__(void * void_arg , const char * ecl_file , const /*****************************************************************/ #define VOID_FORWARD_LOAD_VECTOR(prefix) \ - bool prefix ## _forward_load_vector__(void * void_arg , const char * ecl_file , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_file, int report_step1 , int report_step2) { \ + bool prefix ## _forward_load_vector__(void * void_arg , const char * ecl_file , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_file, const int_vector_type * time_index) { \ prefix ## _type * arg = prefix ## _safe_cast( void_arg ); \ - return prefix ## _forward_load_vector(arg , ecl_file , ecl_sum , restart_file , report_step1 , report_step2); \ + return prefix ## _forward_load_vector(arg , ecl_file , ecl_sum , restart_file , time_index); \ } -#define VOID_FORWARD_LOAD_VECTOR_HEADER(prefix) bool prefix ## _forward_load_vector__(void * , const char * , const ecl_sum_type *, const ecl_file_type * , int , int); +#define VOID_FORWARD_LOAD_VECTOR_HEADER(prefix) bool prefix ## _forward_load_vector__(void * , const char * , const ecl_sum_type *, const ecl_file_type * , const int_vector_type * ); /*****************************************************************/ @@ -266,11 +267,11 @@ void prefix ## _set_inflation__( void * void_inflation , const void * void_std , /*****************************************************************/ #define VOID_GET_OBS(prefix) \ -void prefix ## _get_observations__(const void * void_arg , obs_data_type * obs_data, int report_step , const active_list_type * __active_list) { \ - prefix ## _get_observations((prefix ## _type *) void_arg , obs_data , report_step , __active_list); \ +void prefix ## _get_observations__(const void * void_arg , obs_data_type * obs_data, enkf_fs_type * fs, int report_step , const active_list_type * __active_list) { \ + prefix ## _get_observations((prefix ## _type *) void_arg , obs_data , fs, report_step , __active_list); \ } -#define VOID_GET_OBS_HEADER(prefix) void prefix ## _get_observations__(const void * , obs_data_type * , int , const active_list_type * ) +#define VOID_GET_OBS_HEADER(prefix) void prefix ## _get_observations__(const void * , obs_data_type * , enkf_fs_type *, int , const active_list_type * ) /*****************************************************************/ diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h index 2b3fe17672..6a1db5eacc 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h @@ -28,12 +28,12 @@ extern "C" { #include #include #include -#include #include #include #include #include #include +#include #include @@ -65,17 +65,6 @@ extern "C" { /*****************************************************************/ typedef struct enkf_main_struct enkf_main_type; - //void enkf_main_close_alt_fs(const enkf_main_type * enkf_main , enkf_fs_type * fs); - bool enkf_main_case_is_current(const enkf_main_type * enkf_main , const char * case_path); - enkf_fs_type * enkf_main_mount_alt_fs(const enkf_main_type * enkf_main , const char * case_path , bool read_only , bool create); - state_map_type * enkf_main_alloc_readonly_state_map( const enkf_main_type * enkf_main , const char * case_path); - stringlist_type * enkf_main_alloc_caselist( const enkf_main_type * enkf_main ); - void enkf_main_set_fs( enkf_main_type * enkf_main , enkf_fs_type * fs , const char * case_path ); - char * enkf_main_alloc_mount_point( const enkf_main_type * enkf_main , const char * case_path); - const char * enkf_main_get_current_fs( const enkf_main_type * enkf_main ); - void enkf_main_user_select_fs(enkf_main_type * enkf_main , const char * case_path ); - bool enkf_main_fs_exists(const enkf_main_type * enkf_main, const char * input_case); - char * enkf_main_read_alloc_current_case_name(const enkf_main_type * enkf_main); ui_return_type * enkf_main_set_eclbase( enkf_main_type * enkf_main , const char * eclbase_fmt); ui_return_type * enkf_main_set_data_file( enkf_main_type * enkf_main , const char * data_file ); void enkf_main_set_user_config_file( enkf_main_type * enkf_main , const char * user_config_file ); @@ -93,7 +82,7 @@ extern "C" { const char * enkf_main_get_log_file( const enkf_main_type * enkf_main ); void enkf_main_set_log_level( enkf_main_type * enkf_main , int log_level ); int enkf_main_get_log_level( const enkf_main_type * enkf_main ); - log_type * enkf_main_get_logh( const enkf_main_type * enkf_main ); + member_config_type * enkf_main_iget_member_config(const enkf_main_type * enkf_main , int iens); void enkf_main_del_unused_static(enkf_main_type * , int ); const char * enkf_main_get_data_file(const enkf_main_type * ); @@ -116,11 +105,12 @@ extern "C" { void enkf_main_load_ecl_complete_mt(enkf_main_type *); void enkf_main_iload_ecl_mt(enkf_main_type *enkf_main , int ); + bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type * step_list, enkf_fs_type * target_fs , int target_step , run_mode_type run_mode); void enkf_main_assimilation_update(enkf_main_type * enkf_main , const int_vector_type * step_list); bool enkf_main_smoother_update(enkf_main_type * enkf_main , enkf_fs_type * target_fs); void enkf_main_run_post_workflow( enkf_main_type * enkf_main ); - bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode); + bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode, int iter); void enkf_main_run_exp(enkf_main_type * enkf_main , bool_vector_type * iactive , @@ -136,10 +126,8 @@ extern "C" { int start_report , state_enum start_state); - void enkf_main_run_smoother(enkf_main_type * enkf_main , const char * target_fs_name , bool_vector_type * iactive , bool rerun); - bool enkf_main_iterate_smoother(enkf_main_type * enkf_main, int iteration_number, const char * target_fs_name , bool_vector_type * iactive); - void enkf_main_run_iterated_ES(enkf_main_type * enkf_main); - void enkf_main_run_one_more_iteration(enkf_main_type * enkf_main, int step2); + void enkf_main_run_smoother(enkf_main_type * enkf_main , const char * target_fs_name , bool_vector_type * iactive , int iter , bool rerun); + void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations); void enkf_main_set_data_kw(enkf_main_type * , const char * , const char *); void enkf_main_set_state_run_path(const enkf_main_type * , int ); void enkf_main_set_state_eclbase(const enkf_main_type * , int ); @@ -168,46 +156,19 @@ extern "C" { model_config_type * enkf_main_get_model_config( const enkf_main_type * ); local_config_type * enkf_main_get_local_config( const enkf_main_type * enkf_main ); plot_config_type * enkf_main_get_plot_config( const enkf_main_type * enkf_main ); - enkf_fs_type * enkf_main_get_fs(const enkf_main_type * ); void enkf_main_load_obs( enkf_main_type * enkf_main , const char * obs_config_file ); void enkf_main_reload_obs( enkf_main_type * enkf_main); enkf_obs_type * enkf_main_get_obs(const enkf_main_type * ); bool enkf_main_have_obs( const enkf_main_type * enkf_main ); analysis_config_type * enkf_main_get_analysis_config(const enkf_main_type * ); - void enkf_main_select_fs( enkf_main_type * enkf_main , const char * case_path ); - + void * enkf_main_get_enkf_config_node_type(const ensemble_config_type *, const char *); void enkf_main_set_field_config_iactive(const ensemble_config_type *, int); - const char * enkf_main_get_image_viewer(const enkf_main_type * ); + const char * enkf_main_get_image_viewer(const enkf_main_type * ); const char * enkf_main_get_plot_driver(const enkf_main_type * enkf_main ); const char * enkf_main_get_image_type(const enkf_main_type * enkf_main); - void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , const stringlist_type * param_list , int iens1 , int iens2, init_mode_enum init_mode); - void enkf_main_initialize_from_existing(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step, - state_enum source_state, - const bool_vector_type * iens_mask, - const char * ranking_key); - - void enkf_main_copy_ensemble(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step, - state_enum source_state, - const char * target_case , - int target_report_step, - state_enum target_state, - const bool_vector_type * iens_mask, - const char * ranking_key , - const stringlist_type * node_list); - - void enkf_main_initialize_from_existing__(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step, - state_enum source_state, - const bool_vector_type * iens_mask, - const char * ranking_key, - const stringlist_type * node_list); + pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_main , @@ -215,7 +176,6 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ double truncation_or_ncomp); - void enkf_main_set_case_table( enkf_main_type * enkf_main , const char * case_table_file ); void enkf_main_list_users( set_type * users , const char * executable ); const ext_joblist_type * enkf_main_get_installed_jobs( const enkf_main_type * enkf_main ); @@ -233,8 +193,6 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ void enkf_main_install_SIGNALS(void); const char * enkf_main_get_SVN_VERSION( void ); const char * enkf_main_get_COMPILE_TIME( void ); - bool enkf_main_case_is_initialized( const enkf_main_type * enkf_main , const char * case_name , bool_vector_type * __mask); - bool enkf_main_is_initialized( const enkf_main_type * enkf_main ,bool_vector_type * __mask); void enkf_main_del_node(enkf_main_type * enkf_main , const char * key); void enkf_main_update_node( enkf_main_type * enkf_main , const char * key ); void enkf_main_fprintf_config( const enkf_main_type * enkf_main ); @@ -248,13 +206,17 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ double truncation , int ncomp , matrix_type * PC , - matrix_type * PC_obs); + matrix_type * PC_obs, + double_vector_type * singular_values); + void enkf_main_init_PC( const enkf_main_type * enkf_main , const local_obsdata_type * obsdata , double truncation_or_ncomp , matrix_type * PC , - matrix_type * PC_obs ); + matrix_type * PC_obs , + double_vector_type * singular_values); + void enkf_main_fprintf_PC(const char * filename , matrix_type * PC , @@ -273,13 +235,122 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ rng_config_type * enkf_main_get_rng_config( const enkf_main_type * enkf_main ); void enkf_main_rng_init( enkf_main_type * enkf_main); - bool enkf_main_export_field(const enkf_main_type * enkf_main, + + char * enkf_main_alloc_abs_path_to_init_file(const enkf_main_type * enkf_main, const enkf_config_node_type * enkf_config_node); + + bool enkf_main_export_field(const enkf_main_type * enkf_main, const char * kw, const char * path, - int_vector_type * realization_list, + bool_vector_type * iactive, + field_file_format_type file_type, + int report_step, + state_enum state); + + bool enkf_main_export_field_with_fs(const enkf_main_type * enkf_main, + const char * kw, + const char * path, + bool_vector_type * iactive, field_file_format_type file_type, int report_step, - state_enum state); + state_enum state, + enkf_fs_type * fs); + + + void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs); + void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list); + + void enkf_main_load_from_forward_model_from_gui(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, enkf_fs_type * fs); + + void enkf_main_rank_on_observations(enkf_main_type * enkf_main, + const char * ranking_key, + const stringlist_type * obs_ranking_keys, + const int_vector_type * steps); + + + + void enkf_main_rank_on_data(enkf_main_type * enkf_main, + const char * ranking_key, + const char * data_key, + bool sort_increasing, + int step); + + + void enkf_main_export_ranking(enkf_main_type * enkf_main, const char * ranking_key, const char * ranking_file); + + + + + + + + /********* File System / Case Management ********** + Implementation: enkf_main_manage_fs.c */ + + + bool enkf_main_case_is_current(const enkf_main_type * enkf_main , const char * case_path); + char * enkf_main_read_alloc_current_case_name(const enkf_main_type * enkf_main); + stringlist_type * enkf_main_alloc_caselist( const enkf_main_type * enkf_main ); + void enkf_main_set_case_table( enkf_main_type * enkf_main , const char * case_table_file ); + + void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , + const stringlist_type * param_list , + int iens1 , + int iens2, + init_mode_enum init_mode); + + void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_main , + const stringlist_type * param_list , + const bool_vector_type * iens_mask , + init_mode_enum init_mode); + + void enkf_main_init_current_case_from_existing(enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state); + + void enkf_main_init_current_case_from_existing_custom(enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + stringlist_type * node_list, + bool_vector_type * iactive); + + + void enkf_main_init_case_from_existing(const enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + enkf_fs_type * target_case); + + void enkf_main_init_case_from_existing_custom(const enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + enkf_fs_type * target_case, + stringlist_type * node_list, + bool_vector_type * iactive); + + bool enkf_main_case_is_initialized( const enkf_main_type * enkf_main , + const char * case_name , + bool_vector_type * __mask); + + bool enkf_main_is_initialized( const enkf_main_type * enkf_main ,bool_vector_type * __mask); + + char * enkf_main_alloc_mount_point( const enkf_main_type * enkf_main , const char * case_path); + enkf_fs_type * enkf_main_get_fs(const enkf_main_type * ); + enkf_fs_type * enkf_main_get_fs_ref(const enkf_main_type * enkf_main); + const char * enkf_main_get_current_fs( const enkf_main_type * enkf_main ); + enkf_fs_type * enkf_main_mount_alt_fs(const enkf_main_type * enkf_main , const char * case_path , bool create); + void enkf_main_set_fs( enkf_main_type * enkf_main , enkf_fs_type * fs , const char * case_path ); + void enkf_main_user_select_fs(enkf_main_type * enkf_main , const char * case_path ); + void enkf_main_select_fs( enkf_main_type * enkf_main , const char * case_path ); + bool enkf_main_fs_exists(const enkf_main_type * enkf_main, const char * input_case); + const char * enkf_main_get_mount_root( const enkf_main_type * enkf_main); + + + state_map_type * enkf_main_alloc_readonly_state_map( const enkf_main_type * enkf_main , const char * case_path); + time_map_type * enkf_main_alloc_readonly_time_map( const enkf_main_type * enkf_main , const char * case_path ); + UTIL_SAFE_CAST_HEADER(enkf_main); UTIL_IS_INSTANCE_HEADER(enkf_main); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main_jobs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main_jobs.h new file mode 100644 index 0000000000..b57353ca4e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main_jobs.h @@ -0,0 +1,35 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_main_jobs.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef ENKF_MAIN_JOBS_H +#define ENKF_MAIN_JOBS_H + +#ifdef __cplusplus +extern "C" { +#endif + + +void * enkf_main_select_case_JOB( void * self , const stringlist_type * args); +void * enkf_main_create_case_JOB( void * self , const stringlist_type * args); + + +#ifdef __cplusplus +} +#endif + +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_node.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_node.h index 630bd43a5b..75351ac237 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_node.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_node.h @@ -27,6 +27,7 @@ #include #include #include +#include #include #include @@ -57,10 +58,10 @@ extern "C" { typedef void (ecl_write_ftype) (const void * , /* Node object */ const char * , /* Directory to write to. */ const char * , /* Filename - can be NULL. */ - fortio_type *); /* fortio inistance for writing elements in restart files. */ + void * ); /* fortio or FILE inistance for writing elements in restart files. */ typedef bool (fload_ftype) ( void * , const char *); - typedef void (read_from_buffer_ftype) ( void * , buffer_type * , int, state_enum ); + typedef void (read_from_buffer_ftype) ( void * , buffer_type * , enkf_fs_type * , int, state_enum ); typedef bool (write_to_buffer_ftype) (const void * , buffer_type * , int, state_enum ); typedef bool (has_data_ftype) (const void * , int , state_enum); @@ -75,7 +76,7 @@ extern "C" { typedef void * (alloc_ftype) (const void *); typedef bool (initialize_ftype) ( void * , int , const char * , rng_type * ); typedef bool (forward_load_ftype) (void * , const char * , const ecl_sum_type * , const ecl_file_type * , int); - typedef bool (forward_load_vector_ftype) (void * , const char * , const ecl_sum_type * , const ecl_file_type * , int , int); + typedef bool (forward_load_vector_ftype) (void * , const char * , const ecl_sum_type * , const ecl_file_type * , const int_vector_type * ); typedef void (realloc_data_ftype) (void * ); typedef void (free_data_ftype) (void * ); typedef void (node_free_ftype) ( void *); @@ -110,6 +111,7 @@ extern "C" { bool enkf_node_user_get_vector( enkf_node_type * enkf_node , enkf_fs_type * fs , const char * key , int iens , state_enum state , double_vector_type * values); bool enkf_node_user_get_no_id(enkf_node_type * enkf_node , enkf_fs_type * fs , const char * key , int report_step, int iens, state_enum state , double * value); bool enkf_node_user_get(enkf_node_type * , enkf_fs_type * , const char * , node_id_type , double * ); + enkf_node_type * enkf_node_deep_alloc(const enkf_config_node_type * config); enkf_node_type * enkf_node_alloc(const enkf_config_node_type *); enkf_node_type * enkf_node_copyc(const enkf_node_type * ); /* @@ -133,10 +135,10 @@ extern "C" { void enkf_node_serialize(enkf_node_type * enkf_node , enkf_fs_type * fs , node_id_type node_id , const active_list_type * active_list , matrix_type * A , int row_offset , int column); void enkf_node_deserialize(enkf_node_type *enkf_node , enkf_fs_type * fs , node_id_type node_id , const active_list_type * active_list , const matrix_type * A , int row_offset , int column); - bool enkf_node_forward_load_vector(enkf_node_type *enkf_node , const char * run_path , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_block , int report_step1, int report_step2 , int iens ); + bool enkf_node_forward_load_vector(enkf_node_type *enkf_node , const char * run_path , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_block , const int_vector_type * time_index , int iens ); bool enkf_node_forward_load (enkf_node_type *, const char * , const ecl_sum_type * , const ecl_file_type * , int, int ); void enkf_node_ecl_load_static (enkf_node_type *, const ecl_kw_type * , int , int); - void enkf_node_ecl_write (const enkf_node_type *, const char * , fortio_type * , int); + void enkf_node_ecl_write (const enkf_node_type *, const char * , void * , int); bool enkf_node_initialize(enkf_node_type *enkf_node , int , rng_type * ); void enkf_node_printf(const enkf_node_type *); bool enkf_node_fwrite (enkf_node_type * , FILE * stream, bool , int , int , state_enum); @@ -161,13 +163,15 @@ extern "C" { enkf_node_type * enkf_node_load_alloc( const enkf_config_node_type * config_node , enkf_fs_type * fs , node_id_type node_id); bool enkf_node_fload( enkf_node_type * enkf_node , const char * filename ); void enkf_node_load(enkf_node_type * enkf_node , enkf_fs_type * fs , node_id_type node_id ); + void enkf_node_load_vector( enkf_node_type * enkf_node , enkf_fs_type * fs , int iens , state_enum state); bool enkf_node_store(enkf_node_type * enkf_node , enkf_fs_type * fs , bool force_vectors , node_id_type node_id); bool enkf_node_store_vector(enkf_node_type *enkf_node , enkf_fs_type * fs , int iens , state_enum state); bool enkf_node_try_load(enkf_node_type *enkf_node , enkf_fs_type * fs , node_id_type node_id); bool enkf_node_try_load_vector(enkf_node_type *enkf_node , enkf_fs_type * fs , int iens , state_enum state); bool enkf_node_exists( enkf_node_type *enkf_node , enkf_fs_type * fs , int report_step , int iens , state_enum state); bool enkf_node_vector_storage( const enkf_node_type * node ); - enkf_node_type * enkf_node_container_alloc(const enkf_config_node_type * config, hash_type * node_hash); + enkf_node_type * enkf_node_alloc_shared_container(const enkf_config_node_type * config, hash_type * node_hash); + enkf_node_type * enkf_node_alloc_private_container(const enkf_config_node_type * config); /*****************************************************************/ /* Function callbacks */ ecl_write_ftype * enkf_node_get_func_pointer( const enkf_node_type * node ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_obs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_obs.h index bbd04c6bce..ccd4d50f5f 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_obs.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_obs.h @@ -35,6 +35,7 @@ extern "C" { #include #include #include +#include #include #include #include @@ -47,19 +48,26 @@ extern "C" { void enkf_obs_free( enkf_obs_type * enkf_obs); + obs_vector_type * enkf_obs_iget_vector(const enkf_obs_type * obs, int index); obs_vector_type * enkf_obs_get_vector(const enkf_obs_type * , const char * ); void enkf_obs_add_obs_vector(enkf_obs_type * enkf_obs, const char * key, const obs_vector_type * vector); void enkf_obs_load(enkf_obs_type * enkf_obs, const history_type * history , + time_map_type * external_time_map, const char * config_file, const ecl_grid_type * grid , const ecl_sum_type * refcase , double std_cutoff , ensemble_config_type * ensemble_config); - void enkf_obs_reload( enkf_obs_type * enkf_obs , const history_type * history , - const ecl_grid_type * grid , const ecl_sum_type * refcase , double std_cutoff , ensemble_config_type * ensemble_config ); + void enkf_obs_reload( enkf_obs_type * enkf_obs , + const history_type * history , + time_map_type * external_time_map, + const ecl_grid_type * grid , + const ecl_sum_type * refcase , + double std_cutoff , + ensemble_config_type * ensemble_config ); void enkf_obs_get_obs_and_measure( const enkf_obs_type * enkf_obs, @@ -67,7 +75,6 @@ extern "C" { const int_vector_type * step_list , state_enum state, const int_vector_type * ens_active_list, - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data, const local_obsset_type * obsset); @@ -78,7 +85,6 @@ extern "C" { const local_obsdata_node_type * obs_node , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data); @@ -88,7 +94,6 @@ extern "C" { const local_obsdata_type * local_obsdata , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data); @@ -98,12 +103,13 @@ extern "C" { const obs_vector_type * enkf_obs_user_get_vector(const enkf_obs_type * obs , const char * full_key, char ** index_key ); bool enkf_obs_has_key(const enkf_obs_type * , const char * ); + int enkf_obs_get_size( const enkf_obs_type * obs ); hash_iter_type * enkf_obs_alloc_iter( const enkf_obs_type * enkf_obs ); stringlist_type * enkf_obs_alloc_keylist(enkf_obs_type * enkf_obs ); stringlist_type * enkf_obs_alloc_matching_keylist(const enkf_obs_type * enkf_obs , const char * input_string); - time_t enkf_obs_iget_obs_time(enkf_obs_type * enkf_obs , int report_step); + time_t enkf_obs_iget_obs_time(const enkf_obs_type * enkf_obs , int report_step); void enkf_obs_fprintf_config( const enkf_obs_type * enkf_obs , FILE * stream); void enkf_obs_scale_std(enkf_obs_type * enkf_obs, double scale_factor); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw.h new file mode 100644 index 0000000000..9a9abae909 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw.h @@ -0,0 +1,56 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#ifndef __ENKF_PLOT_GEN_KW_H__ +#define __ENKF_PLOT_GEN_KW_H__ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include + +#include +#include + + typedef struct enkf_plot_gen_kw_struct enkf_plot_gen_kw_type; + + enkf_plot_gen_kw_type * enkf_plot_gen_kw_alloc( const enkf_config_node_type * enkf_config_node); + void enkf_plot_gen_kw_free( enkf_plot_gen_kw_type * gen_kw ); + int enkf_plot_gen_kw_get_size( const enkf_plot_gen_kw_type * gen_kw ); + enkf_plot_gen_kw_vector_type * enkf_plot_gen_kw_iget( const enkf_plot_gen_kw_type * vector , int index); + void enkf_plot_gen_kw_load( enkf_plot_gen_kw_type * gen_kw , + enkf_fs_type * fs , + bool transform_data , + int report_step , + state_enum state , + const bool_vector_type * input_mask); + + const char * enkf_plot_gen_kw_iget_key( const enkf_plot_gen_kw_type * plot_gen_kw, int index); + int enkf_plot_gen_kw_get_keyword_count( const enkf_plot_gen_kw_type * gen_kw ); + bool enkf_plot_gen_kw_should_use_log_scale(const enkf_plot_gen_kw_type * gen_kw , int index); + + UTIL_IS_INSTANCE_HEADER( enkf_plot_gen_kw ); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw_vector.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw_vector.h new file mode 100644 index 0000000000..fcee91f971 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gen_kw_vector.h @@ -0,0 +1,47 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#ifndef __ENKF_PLOT_GEN_KW_VECTOR_H__ +#define __ENKF_PLOT_GEN_KW_VECTOR_H__ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include + +#include + + typedef struct enkf_plot_gen_kw_vector_struct enkf_plot_gen_kw_vector_type; + + enkf_plot_gen_kw_vector_type * enkf_plot_gen_kw_vector_alloc( const enkf_config_node_type * config_node , int iens ); + void enkf_plot_gen_kw_vector_free( enkf_plot_gen_kw_vector_type * vector ); + int enkf_plot_gen_kw_vector_get_size( const enkf_plot_gen_kw_vector_type * vector ); + void enkf_plot_gen_kw_vector_reset( enkf_plot_gen_kw_vector_type * vector ); + void enkf_plot_gen_kw_vector_load( enkf_plot_gen_kw_vector_type * vector , enkf_fs_type * fs , bool transform_data , int report_step , state_enum state ); + void * enkf_plot_gen_kw_vector_load__( void * arg ); + double enkf_plot_gen_kw_vector_iget( const enkf_plot_gen_kw_vector_type * vector , int index); + + UTIL_IS_INSTANCE_HEADER( enkf_plot_gen_kw_vector ); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gendata.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gendata.h new file mode 100644 index 0000000000..0484d06509 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_gendata.h @@ -0,0 +1,58 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gendata.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __ENKF_PLOT_GENDATA_H__ +#define __ENKF_PLOT_GENDATA_H__ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include + +#include +#include +#include +#include + + + +typedef struct enkf_plot_gendata_struct enkf_plot_gendata_type; + +enkf_plot_gendata_type * enkf_plot_gendata_alloc( const enkf_config_node_type * enkf_config_node); +enkf_plot_gendata_type * enkf_plot_gendata_alloc_from_obs_vector( const obs_vector_type * obs_vector ); +void enkf_plot_gendata_free( enkf_plot_gendata_type * data ); +int enkf_plot_gendata_get_size( const enkf_plot_gendata_type * data ); +enkf_plot_genvector_type * enkf_plot_gendata_iget( const enkf_plot_gendata_type * plot_data , int index); +void enkf_plot_gendata_load( enkf_plot_gendata_type * plot_data , + enkf_fs_type * fs , + int report_step , + state_enum state , + const bool_vector_type * input_mask); + +double_vector_type * enkf_plot_gendata_get_min_values(enkf_plot_gendata_type * plot_data); +double_vector_type * enkf_plot_gendata_get_max_values(enkf_plot_gendata_type * plot_data); + + +UTIL_IS_INSTANCE_HEADER( enkf_plot_gendata ); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_genvector.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_genvector.h new file mode 100644 index 0000000000..89bb4986d7 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_plot_genvector.h @@ -0,0 +1,45 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_genvector.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __ENKF_PLOT_GENVECTOR_H__ +#define __ENKF_PLOT_GENVECTOR_H__ + +#ifdef __cplusplus +extern "C" { +#endif + +#include + +#include + +typedef struct enkf_plot_genvector_struct enkf_plot_genvector_type; + +enkf_plot_genvector_type * enkf_plot_genvector_alloc( const enkf_config_node_type * enkf_config_node , int iens); +void enkf_plot_genvector_free( enkf_plot_genvector_type * vector ); +int enkf_plot_genvector_get_size( const enkf_plot_genvector_type * vector ); +void enkf_plot_genvector_reset( enkf_plot_genvector_type * vector ); +void * enkf_plot_genvector_load__( void * arg ); +double enkf_plot_genvector_iget( const enkf_plot_genvector_type * vector , int index); + +UTIL_IS_INSTANCE_HEADER( enkf_plot_genvector ); + + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h index 6dbcef6291..750df92bb6 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h @@ -29,7 +29,7 @@ extern "C" { #include #include #include -#include + #include @@ -100,7 +100,6 @@ typedef struct enkf_state_struct enkf_state_type; ensemble_config_type * , const site_config_type * , const ecl_config_type * , - log_type * logh, ert_templates_type * templates, subst_list_type * parent_subst); void enkf_state_update_node( enkf_state_type * enkf_state , const char * node_key ); @@ -136,7 +135,8 @@ typedef struct enkf_state_struct enkf_state_type; int init_step_parameter , state_enum init_state_parameter , state_enum init_state_dynamic , - int load_start , + int load_start , + int iter , int step1 , int step2 ); int enkf_state_get_queue_index(const enkf_state_type * enkf_state); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ensemble_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ensemble_config.h index 8e5690f004..3c71f6d541 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ensemble_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ensemble_config.h @@ -43,7 +43,9 @@ typedef struct ensemble_config_struct ensemble_config_type; const char * ensemble_config_get_gen_kw_format( const ensemble_config_type * ensemble_config ); enkf_config_node_type * ensemble_config_add_container( ensemble_config_type * ensemble_config , const char * key); enkf_config_node_type * ensemble_config_add_surface( ensemble_config_type * ensemble_config , const char * key , bool forward_init); - enkf_config_node_type * ensemble_config_add_gen_data( ensemble_config_type * config , const char * key , bool forward_init); + + void ensemble_config_add_node( ensemble_config_type * ensemble_config , enkf_config_node_type * node); + enkf_config_node_type * ensemble_config_add_gen_data( ensemble_config_type * config , const char * key , bool dynamic , bool forward_init); enkf_config_node_type * ensemble_config_add_summary(ensemble_config_type * ensemble_config , const char * key, load_fail_type load_fail); enkf_config_node_type * ensemble_config_add_gen_kw( ensemble_config_type * config , const char * key , bool forward_init); enkf_config_node_type * ensemble_config_add_field( ensemble_config_type * config , const char * key , ecl_grid_type * ecl_grid , bool forward_init); @@ -61,11 +63,9 @@ typedef struct ensemble_config_struct ensemble_config_type; bool ensemble_config_has_impl_type(const ensemble_config_type * config, const ert_impl_type impl_type); bool ensemble_config_have_forward_init( const ensemble_config_type * ensemble_config ); - void ensemble_config_init_internalization( ensemble_config_type * ); void ensemble_config_del_node(ensemble_config_type * , const char * ); void ensemble_config_add_config_items(config_type * ); - - void ensemble_config_add_GEN_PARAM_config_item( config_type * config ); + void ensemble_config_init_GEN_PARAM( ensemble_config_type * ensemble_config , const config_type * config ); enkf_config_node_type * ensemble_config_get_node(const ensemble_config_type * , const char * ); @@ -73,13 +73,15 @@ typedef struct ensemble_config_struct ensemble_config_type; stringlist_type * ensemble_config_alloc_keylist_from_var_type(const ensemble_config_type * , int var_mask); stringlist_type * ensemble_config_alloc_keylist_from_impl_type(const ensemble_config_type * , ert_impl_type ); bool ensemble_config_iget_keep_runpath(const ensemble_config_type * , int ); - ensemble_config_type * ensemble_config_alloc_empty( ); + ensemble_config_type * ensemble_config_alloc( ); void ensemble_config_fprintf_config( ensemble_config_type * ensemble_config , FILE * stream ); enkf_config_node_type * ensemble_config_add_STATIC_node(ensemble_config_type * , const char * ); - + + UTIL_IS_INSTANCE_HEADER( ensemble_config ); + UTIL_SAFE_CAST_HEADER( ensemble_config ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_log.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_log.h new file mode 100644 index 0000000000..f6819fd1bf --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_log.h @@ -0,0 +1,45 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_log.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef ERTLOG_H +#define ERTLOG_H + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include + +#include + +void ert_log_init_log(int log_level,const char * log_file_name, bool verbose); +void ert_log_add_fmt_message(int message_level , FILE * dup_stream , const char * fmt , ...); +void ert_log_add_message(int message_level , FILE * dup_stream , char* message, bool free_message); +void ert_log_add_message_py(int message_level, char* message); +void ert_log_close(); +bool ert_log_is_open(); +int ert_log_get_log_level(); +const char * ert_log_get_filename(); +log_type * ert_log_get_logh(); +void ert_log_open_empty(); + +#ifdef __cplusplus +} +#endif +#endif // ERTLOG_H diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_test_context.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_test_context.h new file mode 100644 index 0000000000..01890edb92 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_test_context.h @@ -0,0 +1,55 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_test_context.h' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef ERT_TEST_CONTEXT_H +#define ERT_TEST_CONTEXT_H + +#include + +#include + +#include + +#ifdef __cplusplus +extern "C" { +#endif + +typedef struct ert_test_context_struct ert_test_context_type; + +void ert_test_context_set_store( ert_test_context_type * test_context , bool store); +ert_test_context_type * ert_test_context_alloc( const char * test_name , const char * model_config , const char * site_config); +ert_test_context_type * ert_test_context_alloc_python( const char * test_name , const char * model_config , const char * site_config); +void ert_test_context_free( ert_test_context_type * test_context ); +enkf_main_type * ert_test_context_get_main( ert_test_context_type * test_context ); +bool ert_test_context_install_workflow_job( ert_test_context_type * test_context , const char * job_name , const char * job_file); +bool ert_test_context_run_worklow_job( ert_test_context_type * test_context , const char * job_name, const stringlist_type * args); +void ert_test_context_fwrite_workflow_job( FILE * stream , const char * job_name , const stringlist_type * args); +bool ert_test_context_install_workflow( ert_test_context_type * test_context , const char * workflow_name , const char * workflow_file); +bool ert_test_context_run_worklow( ert_test_context_type * test_context , const char * workflow_name); +const char * ert_test_context_get_cwd( const ert_test_context_type * test_context ); + +UTIL_IS_INSTANCE_HEADER( ert_test_context ); + +#ifdef __cplusplus +} +#endif + +#endif + + diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h index 5637e7db47..d308cae2aa 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h @@ -25,12 +25,13 @@ extern "C" { #endif #include -#include +#include #include #include #include +#include typedef struct ert_workflow_list_struct ert_workflow_list_type; @@ -39,18 +40,25 @@ extern "C" { workflow_type * ert_workflow_list_add_workflow( ert_workflow_list_type * workflow_list , const char * workflow_file , const char * workflow_name); void ert_workflow_list_free( ert_workflow_list_type * workflow_list ); ert_workflow_list_type * ert_workflow_list_alloc( const subst_list_type * subst_list ); - void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_list , const char * path , log_type * logh); + void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_list , const char * path ); void ert_workflow_list_add_job( ert_workflow_list_type * workflow_list , const char * job_name , const char * config_file ); + bool ert_workflow_list_has_job( const ert_workflow_list_type * workflow_list , const char * job_name); + const workflow_job_type * ert_workflow_list_get_job( const ert_workflow_list_type * workflow_list , const char * job_name); void ert_workflow_list_add_alias( ert_workflow_list_type * workflow_list , const char * real_name , const char * alias); void ert_workflow_list_add_config_items( config_type * config ); - void ert_workflow_list_init( ert_workflow_list_type * workflow_list , config_type * config , log_type * logh); - bool ert_workflow_list_run_workflow(ert_workflow_list_type * workflow_list , const char * workflow_name , void * self); - bool ert_workflow_list_run_workflow__(ert_workflow_list_type * workflow_list , workflow_type * workflow, bool verbose , void * self); + void ert_workflow_list_init( ert_workflow_list_type * workflow_list , config_type * config ); + bool ert_workflow_list_run_workflow(ert_workflow_list_type * workflow_list, const char * workflow_name , void * self); + bool ert_workflow_list_run_workflow__(ert_workflow_list_type * workflow_list, workflow_type * workflow, bool verbose , void * self); bool ert_workflow_list_has_workflow(ert_workflow_list_type * workflow_list , const char * workflow_name ); stringlist_type * ert_workflow_list_alloc_namelist( ert_workflow_list_type * workflow_list ); const config_error_type * ert_workflow_list_get_last_error( const ert_workflow_list_type * workflow_list); void ert_workflow_list_set_verbose( ert_workflow_list_type * workflow_list , bool verbose); - + bool ert_workflow_list_run_workflow_blocking(ert_workflow_list_type * workflow_list , const char * workflow_name , void * self); + subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list); + int ert_workflow_list_get_size( const ert_workflow_list_type * workflow_list); + + UTIL_IS_INSTANCE_HEADER( ert_workflow_list ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field.h index d621d91bb2..122c856ddd 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field.h @@ -47,15 +47,17 @@ extern "C" { bool field_ijk_valid(const field_type * , int , int , int ); void field_ijk_get_if_valid(const field_type * , int , int , int , void * , bool *); void field_ecl_write1D_fortio(const field_type * , fortio_type *); - void field_ecl_write3D_fortio(const field_type * , fortio_type *); - void field_ROFF_export(const field_type * , const char * ); + void field_ecl_write3D_fortio(const field_type * , fortio_type *, const char *); + void field_ROFF_export(const field_type * , const char * , const char *); void field_copy_ecl_kw_data(field_type * , const ecl_kw_type * ); field_type * field_alloc_shared(const field_config_type * , void * , int ); void field_free(field_type *); void field_get_dims(const field_type *, int *, int *, int *); - bool field_fload_auto(field_type * , const char * ); - void field_export3D(const field_type * , void *, bool , ecl_type_enum , void *); - void field_export(const field_type * , const char * , fortio_type * , field_file_format_type , bool); + bool field_fload_keep_inactive(field_type * field , const char * filename); + bool field_fload_auto(field_type * , const char * , bool); + bool field_fload_rms(field_type * field , const char * filename, bool keep_inactive); + void field_export3D(const field_type * , void *, bool, ecl_type_enum , void *, const char *); + void field_export(const field_type * , const char * , fortio_type * , field_file_format_type , bool, const char *); field_type * field_copyc(const field_type *); bool field_cmp(const field_type * , const field_type * ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field_config.h index d5014fdd4c..bc94aa5246 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/field_config.h @@ -26,6 +26,7 @@ extern "C" { #include #include +#include #include #include @@ -91,7 +92,7 @@ typedef enum { UNDEFINED_FORMAT = 0, ECL_KW_FILE_ALL_CELLS = 4, /* ecl_kw_format, all cells - used when writing to file. */ ECL_GRDECL_FILE = 5, ECL_FILE = 6, /* Assumes packed on export. */ - FILE_FORMAT_NULL = 7} /* Used when the guess functions are given NULL to check -should never be read. */ field_file_format_type; + FILE_FORMAT_NULL = 7} field_file_format_type; /* Used when the guess functions are given NULL to check -should never be read. */ /* active_cells currently not really implemented */ @@ -115,7 +116,7 @@ void field_config_update_general_field( field_config_type * config , int truncat const char * output_transform ); -field_config_type * field_config_alloc_empty( const char * ecl_kw_name , ecl_grid_type * ecl_grid , field_trans_table_type * trans_table ); +field_config_type * field_config_alloc_empty( const char * ecl_kw_name , ecl_grid_type * ecl_grid , field_trans_table_type * trans_table, bool global_size ); void field_config_get_ijk( const field_config_type * config , int active_index , int *i , int * j , int * k); @@ -132,6 +133,7 @@ int field_config_get_ny(const field_config_type * config ); int field_config_get_nz(const field_config_type * config ); void field_config_free(field_config_type *); int field_config_get_volume(const field_config_type * ); +int field_config_get_data_size_from_grid(const field_config_type * config); void field_config_set_ecl_kw_name(field_config_type * , const char * ); void field_config_set_ecl_type(field_config_type * , ecl_type_enum ); void field_config_set_eclfile(field_config_type * , const char * ); @@ -139,6 +141,7 @@ const bool * field_config_get_iactive(const field_config_type * ); int field_config_get_byte_size(const field_config_type * ); int field_config_get_sizeof_ctype(const field_config_type * ); int field_config_active_index(const field_config_type * , int , int , int ); +int field_config_global_index(const field_config_type * , int , int , int ); void field_config_get_ijk(const field_config_type * , int , int * , int * , int *); bool field_config_ijk_valid(const field_config_type * , int , int , int ); bool field_config_ijk_active(const field_config_type * config , int i , int j , int k); @@ -152,6 +155,7 @@ void field_config_enkf_OFF(field_config_type * ); bool field_config_enkf_mode(const field_config_type * config); void field_config_scanf_ijk(const field_config_type * , bool , const char * , int , int * , int * , int * , int *); const char * field_config_get_key(const field_config_type * ); +bool field_config_keep_inactive_cells(const field_config_type *); field_func_type * field_config_get_init_transform(const field_config_type * ); field_func_type * field_config_get_output_transform(const field_config_type * ); field_func_type * field_config_get_input_transform(const field_config_type * ); @@ -169,7 +173,7 @@ void field_config_set_truncation(field_config_type * , int , int field_config_get_truncation_mode(const field_config_type * config ); double field_config_get_truncation_min( const field_config_type * config ); double field_config_get_truncation_max( const field_config_type * config ); -const ecl_grid_type * field_config_get_grid(const field_config_type * ); +ecl_grid_type * field_config_get_grid(const field_config_type * ); const char * field_config_get_grid_name( const field_config_type * ); int field_config_parse_user_key(const field_config_type * config, const char * index_key , int *i , int *j , int *k); @@ -186,6 +190,7 @@ void field_config_fprintf_config( const field_config_type * config , enkf_var_ty /*Generated headers */ + UTIL_IS_INSTANCE_HEADER(field_config); UTIL_SAFE_CAST_HEADER(field_config); UTIL_SAFE_CAST_HEADER_CONST(field_config); CONFIG_GET_ECL_KW_NAME_HEADER(field); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h index d9255e14b2..4787e97fb0 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h @@ -24,6 +24,7 @@ extern "C" { #include #include +#include #include #include @@ -46,7 +47,7 @@ gen_data_file_format_type gen_data_guess_export_type( const gen_data_type * gen_ const char * gen_data_get_key( const gen_data_type * gen_data); void gen_data_upgrade_103(const char * filename); int gen_data_get_size( const gen_data_type * gen_data ); - +void gen_data_copy_to_double_vector(const gen_data_type * gen_data , double_vector_type * vector); UTIL_SAFE_CAST_HEADER(gen_data); UTIL_SAFE_CAST_HEADER_CONST(gen_data); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data_config.h index bcbcb8dc09..118053ec78 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data_config.h @@ -40,15 +40,20 @@ typedef enum { GEN_DATA_UNDEFINED = 0, gen_data_file_format_type; bool gen_data_config_is_dynamic( const gen_data_config_type * config ); - void gen_data_config_set_dynamic( gen_data_config_type * config , enkf_fs_type * fs); - void gen_data_config_load_active( gen_data_config_type * config , int report_step , bool force_load); - + void gen_data_config_load_active( gen_data_config_type * config , enkf_fs_type * fs, int report_step , bool force_load); + bool gen_data_config_valid_result_format(const char * result_file_fmt); + bool gen_data_config_set_template( gen_data_config_type * config , const char * template_ecl_file , const char * template_data_key ); + + bool gen_data_config_has_active_mask( const gen_data_config_type * config , enkf_fs_type * fs , int report_step); + /* Observe that the format ASCII_template can *NOT* be used for loading files. */ - gen_data_config_type * gen_data_config_alloc_empty( const char * key ); - + gen_data_config_type * gen_data_config_alloc_GEN_PARAM( const char * key , gen_data_file_format_type output_format , gen_data_file_format_type input_format); + gen_data_config_type * gen_data_config_alloc_GEN_DATA_result( const char * key , gen_data_file_format_type input_format); + gen_data_config_type * gen_data_config_alloc_GEN_DATA_state( const char * key , gen_data_file_format_type output_format , gen_data_file_format_type input_format); + void gen_data_config_set_write_fs( gen_data_config_type * config, enkf_fs_type * write_fs); void gen_data_config_set_ens_size( gen_data_config_type * config , int ens_size ); gen_data_file_format_type gen_data_config_get_input_format ( const gen_data_config_type * ); gen_data_file_format_type gen_data_config_get_output_format ( const gen_data_config_type * ); @@ -67,19 +72,19 @@ typedef enum { GEN_DATA_UNDEFINED = 0, int gen_data_config_get_byte_size( const gen_data_config_type * config , int report_step); int gen_data_config_get_data_size( const gen_data_config_type * config , int report_step); gen_data_file_format_type gen_data_config_check_format( const void * format_string ); - bool gen_data_config_is_valid( const gen_data_config_type * gen_data_config ); - void gen_data_config_update(gen_data_config_type * config , - enkf_var_type var_type , - gen_data_file_format_type input_format , - gen_data_file_format_type output_format , - const char * template_ecl_file , - const char * template_data_key ); - + + void gen_data_config_set_active_report_steps_from_string( gen_data_config_type *config , const char * range_string); + const int_vector_type * gen_data_config_get_active_report_steps( const gen_data_config_type *config); + int gen_data_config_iget_report_step( const gen_data_config_type *config , int index); + void gen_data_config_add_report_step( gen_data_config_type * config , int report_step); + bool gen_data_config_has_report_step( const gen_data_config_type * config , int report_step); + int gen_data_config_num_report_step( const gen_data_config_type * config ); const char * gen_data_config_get_template_file( const gen_data_config_type * config ); const char * gen_data_config_get_template_key( const gen_data_config_type * config ); void gen_data_config_fprintf_config( const gen_data_config_type * config , enkf_var_type var_type , const char * outfile , const char * infile , const char * min_std_file , FILE * stream); - + + UTIL_IS_INSTANCE_HEADER(gen_data_config); UTIL_SAFE_CAST_HEADER(gen_data_config); UTIL_SAFE_CAST_HEADER_CONST(gen_data_config); VOID_FREE_HEADER(gen_data_config) diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h index 91ce334d3c..76b3f4c2cd 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h @@ -39,6 +39,12 @@ const double * gen_kw_get_data_ref(const gen_kw_type * ); //void gen_kw_get_data(const gen_kw_type * , double * ); void gen_kw_free(gen_kw_type *); +int gen_kw_data_size( gen_kw_type * ); +double gen_kw_data_iget( gen_kw_type * , int , bool ); +void gen_kw_data_iset( gen_kw_type * , int , double ); +double gen_kw_data_get( gen_kw_type * , const char * , bool ); +void gen_kw_data_set( gen_kw_type *, const char *, double ); +bool gen_kw_data_has_key( gen_kw_type *, const char *); void gen_kw_ens_write(const gen_kw_type * , const char *); void gen_kw_ens_read(gen_kw_type * , const char *); void gen_kw_truncate(gen_kw_type * ); @@ -49,6 +55,7 @@ void gen_kw_export(const gen_kw_type * , int * , char ***, double ** void gen_kw_upgrade_103( const char * filename ); char * gen_kw_alloc_user_key(const gen_kw_config_type * , const char * , int ); void gen_kw_set_subst_parent(gen_kw_type * gen_kw , const subst_list_type * parent_subst); +void gen_kw_ecl_write_template(const gen_kw_type * gen_kw , const char * file_name); UTIL_SAFE_CAST_HEADER(gen_kw); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw_config.h index 4250818180..7bbbc757f4 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw_config.h @@ -43,6 +43,7 @@ const char * gen_kw_config_get_key(const gen_kw_config_type * con const char * gen_kw_config_get_template_file(const gen_kw_config_type * ); void gen_kw_config_free(gen_kw_config_type *); double gen_kw_config_transform(const gen_kw_config_type * , int index, double x); +bool gen_kw_config_should_use_log_scale(const gen_kw_config_type * config, int index); int gen_kw_config_get_data_size(const gen_kw_config_type * ); const char * gen_kw_config_iget_name(const gen_kw_config_type * , int ); const char * gen_kw_config_get_tagged_name(const gen_kw_config_type * , int ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_obs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_obs.h index 7e6cfdb99d..dc65df4a06 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_obs.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_obs.h @@ -31,6 +31,10 @@ void gen_obs_user_get_with_data_index(const gen_obs_type * gen_obs , c void gen_obs_scale_std(gen_obs_type * gen_obs, double std_multiplier ); void gen_obs_scale_std__(void * gen_obs, double std_multiplier ); +int gen_obs_get_size(const gen_obs_type * gen_obs); +double gen_obs_iget_std(const gen_obs_type * gen_obs, int index); +double gen_obs_iget_data(const gen_obs_type * gen_obs, int index); +int gen_obs_get_obs_index(const gen_obs_type * gen_obs, int index); VOID_CHI2_HEADER(gen_obs); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/meas_data.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/meas_data.h index b46b66d96c..d201f7f8c5 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/meas_data.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/meas_data.h @@ -48,9 +48,6 @@ void meas_data_free(meas_data_type * ); void meas_data_add(meas_data_type * , int , double ); matrix_type * meas_data_allocS(const meas_data_type * matrix , int active_size); void meas_data_deactivate(meas_data_type * meas_data, int index); -double meas_data_iget_ens_mean(const meas_data_type * matrix , int index); -double meas_data_iget_ens_std(const meas_data_type * matrix , int index); -void meas_data_iget_ens_mean_std( const meas_data_type * matrix , int index , double * mean , double * std); int meas_data_get_ens_size( const meas_data_type * meas_data ); int meas_data_get_nrobs( const meas_data_type * meas_data ); meas_block_type * meas_data_add_block( meas_data_type * matrix , const char * obs_key , int report_step , int obs_size); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ensemble.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ensemble.h index bda16ac140..9053f2c7ed 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ensemble.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ensemble.h @@ -42,7 +42,15 @@ extern "C" { void misfit_ensemble_free( misfit_ensemble_type * table ); void misfit_ensemble_fwrite( const misfit_ensemble_type * misfit_ensemble , FILE * stream); bool misfit_ensemble_initialized( const misfit_ensemble_type * misfit_ensemble ); - void misfit_ensemble_update( misfit_ensemble_type * misfit_ensemble , const ensemble_config_type * ensemble_config , const enkf_obs_type * enkf_obs , enkf_fs_type * fs , int ens_size , int history_length); + + void misfit_ensemble_initialize( misfit_ensemble_type * misfit_ensemble , + const ensemble_config_type * ensemble_config , + const enkf_obs_type * enkf_obs , + enkf_fs_type * fs , + int ens_size , + int history_length, + bool force_init); + void misfit_ensemble_set_ens_size( misfit_ensemble_type * misfit_ensemble , int ens_size); int misfit_ensemble_get_ens_size( const misfit_ensemble_type * misfit_ensemble ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ranking.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ranking.h index 00eacae652..5c852ae7c5 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ranking.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ranking.h @@ -20,11 +20,13 @@ #define __MISFIT_RANKING_H__ #include +#include #include #include #include + #ifdef __cplusplus extern "C" { #endif @@ -36,7 +38,7 @@ extern "C" { void misfit_ranking_fprintf( const misfit_ranking_type * misfit_ranking , const char * filename); void misfit_ranking_display( const misfit_ranking_type * misfit_ranking , FILE * stream); - misfit_ranking_type * misfit_ranking_alloc(const misfit_ensemble_type * ensemble , const stringlist_type * sort_keys , int step1 , int step2, const char * ranking_key); + misfit_ranking_type * misfit_ranking_alloc(const misfit_ensemble_type * ensemble , const stringlist_type * sort_keys , const int_vector_type * steps, const char * ranking_key); void misfit_ranking_free( misfit_ranking_type * misfit_ranking ); void misfit_ranking_free__( void * arg ); const int * misfit_ranking_get_permutation( const misfit_ranking_type * misfit_ranking ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ts.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ts.h index 61e3888820..b00bf2b03c 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ts.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/misfit_ts.h @@ -30,7 +30,7 @@ extern "C" { void misfit_ts_fwrite( const misfit_ts_type * misfit_ts , FILE * stream ); - double misfit_ts_eval( const misfit_ts_type * ts , int step1 , int step2 ); + double misfit_ts_eval( const misfit_ts_type * ts , const int_vector_type * steps ); misfit_ts_type * misfit_ts_alloc(int history_length); misfit_ts_type * misfit_ts_fread_alloc( FILE * stream ); void misfit_ts_free__( void * vector ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/model_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/model_config.h index 6f0c673a95..3308090ca6 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/model_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/model_config.h @@ -41,6 +41,7 @@ extern "C" { #include #include #include +#include typedef struct model_config_struct model_config_type; @@ -64,8 +65,10 @@ extern "C" { bool model_config_has_prediction(const model_config_type * ); bool model_config_has_history(const model_config_type * config); int model_config_get_last_history_restart(const model_config_type * ); + time_map_type * model_config_get_external_time_map( const model_config_type * config); void model_config_init(model_config_type * model_config , const config_type * , int ens_size , const ext_joblist_type * , int , const sched_file_type * , const ecl_sum_type * refcase); void model_config_free(model_config_type *); + bool model_config_runpath_requires_iter( const model_config_type * model_config ); path_fmt_type * model_config_get_runpath_fmt(const model_config_type * ); enkf_sched_type * model_config_get_enkf_sched(const model_config_type * ); history_type * model_config_get_history(const model_config_type * ); @@ -86,7 +89,9 @@ extern "C" { void model_config_fprintf_config( const model_config_type * model_config , int ens_size ,FILE * stream ); model_config_type * model_config_alloc(); bool model_config_select_history( model_config_type * model_config , history_source_type source_type, const sched_file_type * sched_file , const ecl_sum_type * refcase); - void model_config_set_runpath(model_config_type * model_config , const char * fmt); + void model_config_set_runpath(model_config_type * model_config , const char * fmt); + void model_config_set_gen_kw_export_file( model_config_type * model_config, const char * file_name); + const char * model_config_get_gen_kw_export_file( const model_config_type * model_config); UTIL_IS_INSTANCE_HEADER( model_config); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/obs_vector.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/obs_vector.h index 4f1aefbfd2..6ac5c22e85 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/obs_vector.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/obs_vector.h @@ -41,10 +41,10 @@ extern "C" { #include #include #include - +#include typedef void (obs_free_ftype) (void *); - typedef void (obs_get_ftype) (const void * , obs_data_type * , int , const active_list_type * ); + typedef void (obs_get_ftype) (const void * , obs_data_type * , enkf_fs_type *, int , const active_list_type * ); typedef void (obs_meas_ftype) (const void * , const void *, node_id_type , meas_data_type * , const active_list_type * ); typedef void (obs_user_get_ftype) (void * , const char * , double * , double * , bool *); typedef void (obs_scale_std_ftype) (void * , double ); @@ -62,18 +62,20 @@ extern "C" { void obs_vector_free(obs_vector_type * ); int obs_vector_get_num_active(const obs_vector_type * ); bool obs_vector_iget_active(const obs_vector_type * , int ); - void obs_vector_iget_observations(const obs_vector_type * , int , obs_data_type * , const active_list_type * active_list); - void obs_vector_measure(const obs_vector_type * , enkf_fs_type * fs, state_enum state , int report_step , int active_iens_index , const enkf_state_type * , meas_data_type * , const active_list_type * active_list); + void obs_vector_iget_observations(const obs_vector_type * , int , obs_data_type * , const active_list_type * active_list, enkf_fs_type * fs); + bool obs_vector_has_data( const obs_vector_type * obs_vector , const bool_vector_type * active_mask , enkf_fs_type * fs); + void obs_vector_measure(const obs_vector_type * , enkf_fs_type * fs, state_enum state , int report_step , const int_vector_type * ens_active_list , meas_data_type * , const active_list_type * active_list); const char * obs_vector_get_state_kw(const obs_vector_type * ); + const char * obs_vector_get_key(const obs_vector_type * ); obs_impl_type obs_vector_get_impl_type(const obs_vector_type * ); int obs_vector_get_active_report_step(const obs_vector_type * ); void obs_vector_user_get(const obs_vector_type * obs_vector , const char * index_key , int report_step , double * value , double * std , bool * valid); int obs_vector_get_next_active_step(const obs_vector_type * , int ); void * obs_vector_iget_node(const obs_vector_type * , int ); - obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_type * , const history_type * , const ensemble_config_type * ); - void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * , const history_type * , ensemble_config_type * ); - bool obs_vector_load_from_HISTORY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * , const history_type * , ensemble_config_type * , double std_cutoff ); - obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_type * , const ecl_grid_type * grid , const ecl_sum_type * refcase , const history_type *, ensemble_config_type * ); + obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_type * , time_map_type * obs_time , const ensemble_config_type * ); + void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * , time_map_type * obs_time , ensemble_config_type * ); + bool obs_vector_load_from_HISTORY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * , time_map_type * obs_time , const history_type * , ensemble_config_type * , double std_cutoff ); + obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_type * , const ecl_grid_type * grid , time_map_type * obs_time , const ecl_sum_type * refcase , ensemble_config_type * ); void obs_vector_set_config_node(obs_vector_type * , const enkf_config_node_type * ); obs_vector_type * obs_vector_alloc(obs_impl_type obs_type , const char * obs_key , enkf_config_node_type * config_node, int num_reports); void obs_vector_scale_std(obs_vector_type * obs_vector, double std_multiplier); @@ -91,7 +93,7 @@ extern "C" { double obs_vector_total_chi2(const obs_vector_type * , enkf_fs_type * , int , state_enum ); void obs_vector_ensemble_total_chi2(const obs_vector_type * , enkf_fs_type * , int , state_enum , double * ); - enkf_config_node_type * obs_vector_get_config_node(obs_vector_type * ); + enkf_config_node_type * obs_vector_get_config_node(const obs_vector_type * ); const char * obs_vector_get_obs_key( const obs_vector_type * obs_vector); UTIL_SAFE_CAST_HEADER(obs_vector); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_data.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_data.h index 4c57357be8..3b990e4cfd 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_data.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_data.h @@ -24,13 +24,14 @@ extern "C" { #include #include +#include #include typedef struct pca_plot_data_struct pca_plot_data_type; - pca_plot_data_type * pca_plot_data_alloc( const char * name , const matrix_type * PC, const matrix_type * PC_obs); - + pca_plot_data_type * pca_plot_data_alloc( const char * name , const matrix_type * PC, const matrix_type * PC_obs, const double_vector_type * singular_values); + const double_vector_type * pca_plot_data_get_singular_values( const pca_plot_data_type * plot_data ); void pca_plot_data_free( pca_plot_data_type * plot_data ); const pca_plot_vector_type * pca_plot_data_iget_vector( const pca_plot_data_type * plot_data , int ivec); int pca_plot_data_get_size( const pca_plot_data_type * plot_data ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_vector.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_vector.h index dc83e4a637..35c3f89a6a 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_vector.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/pca_plot_vector.h @@ -24,15 +24,17 @@ extern "C" { #include #include +#include typedef struct pca_plot_vector_struct pca_plot_vector_type; - pca_plot_vector_type * pca_plot_vector_alloc( int component , const matrix_type * PC, const matrix_type * PC_obs); + pca_plot_vector_type * pca_plot_vector_alloc( int component , const matrix_type * PC, const matrix_type * PC_obs, const double_vector_type * singular_values); void pca_plot_vector_free( pca_plot_vector_type * plot_vector ); - bool pca_plot_assert_input( const matrix_type * PC, const matrix_type * PC_obs); + bool pca_plot_assert_input( const matrix_type * PC, const matrix_type * PC_obs , const double_vector_type * singular_values); void pca_plot_vector_free__( void * arg ); double pca_plot_vector_get_obs_value( const pca_plot_vector_type * vector ); + double pca_plot_vector_get_singular_value( const pca_plot_vector_type * vector ); double pca_plot_vector_iget_sim_value( const pca_plot_vector_type * vector , int sim_index); int pca_plot_vector_get_size( const pca_plot_vector_type * vector ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h index e4fec2d135..0694d51962 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h @@ -29,18 +29,19 @@ extern "C" { typedef struct qc_module_struct qc_module_type; - bool qc_module_has_workflow( const qc_module_type * qc_module ); - qc_module_type * qc_module_alloc(ert_workflow_list_type * workflow_list , const char * qc_path); - void qc_module_free(); - bool qc_module_run_workflow( const qc_module_type * qc_module , void * self); - runpath_list_type * qc_module_get_runpath_list( qc_module_type * qc_module ); - void qc_module_set_path( qc_module_type * qc_module , const char * qc_path); - const char * qc_module_get_path( const qc_module_type * qc_module ); - void qc_module_init( qc_module_type * qc_module , const config_type * config); - void qc_module_export_runpath_list( const qc_module_type * qc_module ); - void qc_module_add_config_items( config_type * config ); - void qc_module_set_runpath_list_file( qc_module_type * qc_module , const char * path, const char * filename); - const char * qc_module_get_runpath_list_file( qc_module_type * qc_module); + bool qc_module_has_workflow( const qc_module_type * qc_module ); + const workflow_type * qc_module_get_workflow( const qc_module_type * qc_module ); + qc_module_type * qc_module_alloc(ert_workflow_list_type * workflow_list , const char * qc_path); + void qc_module_free(); + bool qc_module_run_workflow( const qc_module_type * qc_module , void * self); + runpath_list_type * qc_module_get_runpath_list( qc_module_type * qc_module ); + void qc_module_set_path( qc_module_type * qc_module , const char * qc_path); + const char * qc_module_get_path( const qc_module_type * qc_module ); + void qc_module_init( qc_module_type * qc_module , const config_type * config); + void qc_module_export_runpath_list( const qc_module_type * qc_module ); + void qc_module_add_config_items( config_type * config ); + void qc_module_set_runpath_list_file( qc_module_type * qc_module , const char * path, const char * filename); + const char * qc_module_get_runpath_list_file( qc_module_type * qc_module); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ranking_table.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ranking_table.h index 0bd65e5cb3..fa9520c7a8 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ranking_table.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ranking_table.h @@ -46,12 +46,12 @@ extern "C" { bool ranking_table_has_ranking( const ranking_table_type * ranking_table , const char * ranking_key ); bool ranking_table_display_ranking( const ranking_table_type * ranking_table , const char * ranking_key ); + bool ranking_table_fwrite_ranking( const ranking_table_type * ranking_table , const char * ranking_key, const char * filename ); void ranking_table_add_misfit_ranking( ranking_table_type * ranking_table , const misfit_ensemble_type * misfit_ensemble , const stringlist_type * obs_keys , - int step1 , - int step2 , + const int_vector_type * steps, const char * ranking_key); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/rng_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/rng_config.h index 461e7fcdf6..2cadae1901 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/rng_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/rng_config.h @@ -40,7 +40,8 @@ typedef struct rng_config_struct rng_config_type; rng_config_type * rng_config_alloc( ); void rng_config_free( rng_config_type * rng); void rng_config_add_config_items( config_type * config ); - rng_type * rng_config_alloc_rng( rng_config_type * rng_config ); + rng_type * rng_config_alloc_init_rng( const rng_config_type * rng_config); + void rng_config_init_rng(const rng_config_type * rng_config, rng_type * rng ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h index b921985c96..321bf36a14 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h @@ -22,7 +22,7 @@ extern "C" { #endif -#define RUNPATH_LIST_DEFAULT_LINE_FMT "%03d %s %s\n" +#define RUNPATH_LIST_DEFAULT_LINE_FMT "%03d %s %s %03d\n" typedef struct runpath_list_struct runpath_list_type; @@ -30,10 +30,11 @@ extern "C" { void runpath_list_free( runpath_list_type * list ); runpath_list_type * runpath_list_alloc(); int runpath_list_size( const runpath_list_type * list ); - void runpath_list_add( runpath_list_type * list , int iens , const char * runpath , const char * basename); + void runpath_list_add( runpath_list_type * list , int iens , int iter, const char * runpath , const char * basename); void runpath_list_clear( runpath_list_type * list ); void runpath_list_sort( runpath_list_type * list ); int runpath_list_iget_iens( runpath_list_type * list , int index); + int runpath_list_iget_iter( runpath_list_type * list , int index); void runpath_list_set_line_fmt( runpath_list_type * list , const char * line_fmt ); const char * runpath_list_get_line_fmt( const runpath_list_type * list ); void runpath_list_fprintf( runpath_list_type * list , FILE * stream); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/site_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/site_config.h index 16714d1535..87ff1a2e27 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/site_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/site_config.h @@ -35,6 +35,7 @@ extern "C" { typedef struct site_config_struct site_config_type; + bool site_config_has_job_script( const site_config_type * site_config ); const char * site_config_get_manual_url( const site_config_type * site_config ); void site_config_set_manual_url( site_config_type * site_config , const char * manual_url ); const char * site_config_get_default_browser( const site_config_type * site_config ); @@ -81,7 +82,7 @@ typedef struct site_config_struct site_config_type; const char * site_config_get_rsh_command( const site_config_type * site_config ); - void site_config_set_job_script( site_config_type * site_config , const char * job_script ); + bool site_config_set_job_script( site_config_type * site_config , const char * job_script ); const char * site_config_get_job_script( const site_config_type * site_config ); void site_config_set_max_submit( site_config_type * site_config , int max_submit ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/state_map.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/state_map.h index 4062c561a3..e27fa4618d 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/state_map.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/state_map.h @@ -43,7 +43,7 @@ extern "C" { void state_map_iset( state_map_type * map ,int index , realisation_state_enum state); bool state_map_equal( state_map_type * map1 , state_map_type * map2); void state_map_fwrite( state_map_type * map , const char * filename); - void state_map_fread( state_map_type * map , const char * filename); + bool state_map_fread( state_map_type * map , const char * filename); void state_map_select_matching( state_map_type * map , bool_vector_type * select_target , int select_mask); void state_map_deselect_matching( state_map_type * map , bool_vector_type * select_target , int select_mask); void state_map_set_from_inverted_mask(state_map_type * map, const bool_vector_type *mask , realisation_state_enum state); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/summary_config.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/summary_config.h index 929c21ab71..ccea682f1c 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/summary_config.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/summary_config.h @@ -26,6 +26,8 @@ extern "C" { #include #include +#include + #include #include @@ -69,6 +71,7 @@ typedef enum { LOAD_FAIL_SILENT = 0, // We just try to load - and if it is void summary_config_add_obs_key(summary_config_type * , const char * ); int summary_config_get_byte_size(const summary_config_type * ); + UTIL_IS_INSTANCE_HEADER(summary_config); UTIL_SAFE_CAST_HEADER(summary_config); UTIL_SAFE_CAST_HEADER_CONST(summary_config); GET_DATA_SIZE_HEADER(summary); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/time_map.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/time_map.h index f501215935..e10b2bf7d5 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/time_map.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/time_map.h @@ -24,12 +24,21 @@ extern "C" { #include #include +#include #include typedef struct time_map_struct time_map_type; UTIL_SAFE_CAST_HEADER( time_map ); + UTIL_IS_INSTANCE_HEADER( time_map ); + + bool time_map_try_summary_update( time_map_type * map , const ecl_sum_type * ecl_sum); + bool time_map_try_update( time_map_type * map , int step , time_t time); + bool time_map_attach_refcase( time_map_type * time_map , const ecl_sum_type * refcase); + bool time_map_has_refcase( const time_map_type * time_map ); + bool time_map_is_strict( const time_map_type * time_map ); + void time_map_set_strict( time_map_type * time_map , bool strict); void time_map_clear( time_map_type * map ); bool time_map_equal( const time_map_type * map1 , const time_map_type * map2); time_map_type * time_map_alloc( ); @@ -39,15 +48,18 @@ typedef struct time_map_struct time_map_type; time_t time_map_iget( time_map_type * map , int step ); void time_map_fwrite( time_map_type * map , const char * filename); void time_map_fread( time_map_type * map , const char * filename); + bool time_map_fscanf(time_map_type * map , const char * filename); double time_map_iget_sim_days( time_map_type * map , int step ); int time_map_get_last_step( time_map_type * map); int time_map_get_size( time_map_type * map); - void time_map_update_strict( time_map_type * map , int step , time_t time); - void time_map_summary_update_strict( time_map_type * map , const ecl_sum_type * ecl_sum); time_t time_map_get_start_time( time_map_type * map); time_t time_map_get_end_time( time_map_type * map); double time_map_get_end_days( time_map_type * map); - + bool time_map_is_readonly( const time_map_type * tm); + time_map_type * time_map_fread_alloc_readonly( const char * filename); + int_vector_type * time_map_alloc_index_map( time_map_type * map , const ecl_sum_type * ecl_sum ); + int time_map_lookup_time( time_map_type * map , time_t time); + int time_map_lookup_days( time_map_type * map , double sim_days); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/trans_func.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/trans_func.h index d8e342018f..23543b7485 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/trans_func.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/trans_func.h @@ -41,7 +41,7 @@ void trans_func_iset_double_param(trans_func_type * trans_func , bool trans_func_set_double_param( trans_func_type * trans_func , const char * param_name , double value ); void trans_func_iset_int_param(trans_func_type * trans_func , int param_index , int value ); bool trans_func_set_int_param( trans_func_type * trans_func , const char * param_name , int value ); - +bool trans_func_use_log_scale(const trans_func_type * trans_func ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt b/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt index 72695caa3a..50d6960657 100644 --- a/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt @@ -61,13 +61,17 @@ set( source_files local_obsset.c surface.c surface_config.c - enkf_plot_data.c - enkf_plot_tvector.c - qc_module.c + enkf_plot_data.c + enkf_plot_tvector.c + enkf_plot_gendata.c + enkf_plot_genvector.c + enkf_plot_gen_kw.c + enkf_plot_gen_kw_vector.c + qc_module.c ert_report_list.c runpath_list.c - ert_workflow_list.c - analysis_iter_config.c + ert_workflow_list.c + analysis_iter_config.c enkf_main_jobs.c ecl_refcase_list.c local_obsdata_node.c @@ -77,7 +81,9 @@ set( source_files pca_plot_vector.c state_map.c cases_config.c - state_map.c) + state_map.c + ert_test_context.c + ert_log.c) set( header_files ert_report.h @@ -97,6 +103,7 @@ set( header_files enkf_state.h enkf_util.h enkf_main.h + enkf_main_jobs.h enkf_node.h enkf_fs.h gen_kw_config.h @@ -150,13 +157,17 @@ set( header_files surface.h surface_config.h local_context.h - enkf_plot_data.h - enkf_plot_tvector.h + enkf_plot_data.h + enkf_plot_tvector.h + enkf_plot_gendata.h + enkf_plot_genvector.h + enkf_plot_gen_kw.h + enkf_plot_gen_kw_vector.h qc_module.h ert_report_list.h runpath_list.h - ert_workflow_list.h - analysis_iter_config.h + ert_workflow_list.h + analysis_iter_config.h ecl_refcase_list.h local_obsdata_node.h local_obsdata.h @@ -165,13 +176,16 @@ set( header_files pca_plot_vector.h state_map.h cases_config.h - state_map.h) + state_map.h + ert_test_context.h + ert_log.h) add_library( enkf ${LIBRARY_TYPE} ${source_files} ) set_target_properties( enkf PROPERTIES VERSION 1.0 SOVERSION 1.0 ) + #configure_file( ${CMAKE_CURRENT_SOURCE_DIR}/CMake/config/ert_build_info.h.in # ${CMAKE_CURRENT_BINARY_DIR}/ert_build_info.h ) #list( APPEND src_files ${CMAKE_CURRENT_BINARY_DIR}/ert_build_info.h ) @@ -190,4 +204,6 @@ if (INSTALL_ERT) endforeach() endif() +#----------------------------------------------------------------- + diff --git a/ThirdParty/Ert/devel/libenkf/src/analysis_config.c b/ThirdParty/Ert/devel/libenkf/src/analysis_config.c index c2efd7c752..23c23d09c9 100644 --- a/ThirdParty/Ert/devel/libenkf/src/analysis_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/analysis_config.c @@ -277,6 +277,20 @@ void analysis_config_load_internal_module( analysis_config_type * config , fprintf(stderr,"** Warning: failed to load module %s from %s.\n",user_name , symbol_table); } +void analysis_config_load_all_external_modules_from_config ( analysis_config_type * analysis, const config_type * config) { + if (config_item_set( config, ANALYSIS_LOAD_KEY)) { + const config_content_item_type * load_item = config_get_content_item( config , ANALYSIS_LOAD_KEY ); + if (load_item != NULL) { + for (int i=0; i < config_content_item_get_size( load_item ); i++) { + const config_content_node_type * load_node = config_content_item_iget_node( load_item , i ); + const char * user_name = config_content_node_iget( load_node , 0 ); + const char * lib_name = config_content_node_iget( load_node , 1 ); + + analysis_config_load_external_module( analysis , user_name , lib_name); + } + } + } +} bool analysis_config_load_external_module( analysis_config_type * config , @@ -348,8 +362,6 @@ void analysis_config_reload_module( analysis_config_type * config , const char * } - - analysis_module_type * analysis_config_get_module( analysis_config_type * config , const char * module_name ) { return hash_get( config->analysis_modules , module_name ); } @@ -449,8 +461,24 @@ void analysis_config_init( analysis_config_type * analysis , const config_type * if (config_item_set( config , RERUN_START_KEY )) analysis_config_set_rerun_start( analysis , config_get_value_as_int( config , RERUN_START_KEY )); - if (config_item_set( config , MIN_REALIZATIONS_KEY )) - analysis_config_set_min_realisations( analysis , config_get_value_as_int( config , MIN_REALIZATIONS_KEY )); + if (config_item_set( config , MIN_REALIZATIONS_KEY )) { + double percent = 0.0; + config_content_node_type * config_content = config_get_value_node(config , MIN_REALIZATIONS_KEY); + char * min_realizations_string = config_content_node_alloc_joined_string(config_content, " "); + + if (util_sscanf_percent(min_realizations_string, &percent)) { + int num_realizations = config_get_value_as_int(config, NUM_REALIZATIONS_KEY); + int min_realizations = num_realizations * percent/100; + analysis_config_set_min_realisations(analysis, min_realizations); + } else { + int min_realizations = 0; + if (util_sscanf_int(min_realizations_string, &min_realizations)) + analysis_config_set_min_realisations( analysis , min_realizations); + else + fprintf(stderr, "Method %s: failed to read integer value for MIN_REALIZATION_KEY\n", __func__); + } + free(min_realizations_string); + } if (config_item_set( config , STOP_LONG_RUNNING_KEY )) analysis_config_set_stop_long_running( analysis , config_get_value_as_bool( config , STOP_LONG_RUNNING_KEY )); @@ -459,20 +487,10 @@ void analysis_config_init( analysis_config_type * analysis , const config_type * analysis_config_set_max_runtime( analysis, config_get_value_as_int( config, MAX_RUNTIME_KEY )); } - - /* Loading external modules */ - { - const config_content_item_type * load_item = config_get_content_item( config , ANALYSIS_LOAD_KEY ); - if (load_item != NULL) { - for (int i=0; i < config_content_item_get_size( load_item ); i++) { - const config_content_node_type * load_node = config_content_item_iget_node( load_item , i ); - const char * user_name = config_content_node_iget( load_node , 0 ); - const char * lib_name = config_content_node_iget( load_node , 1 ); - - analysis_config_load_external_module( analysis , user_name , lib_name); - } - } - } + + /* Loading external modules */ + analysis_config_load_all_external_modules_from_config(analysis, config); + /* Reload/copy modules. */ { @@ -540,8 +558,10 @@ analysis_iter_config_type * analysis_config_get_iter_config( const analysis_conf void analysis_config_free(analysis_config_type * config) { analysis_iter_config_free( config->iter_config ); hash_free( config->analysis_modules ); - free(config->log_path); - free(config); + free( config->log_path ); + free( config->PC_filename ); + free( config->PC_path ); + free( config ); } @@ -606,7 +626,7 @@ void analysis_config_add_config_items( config_type * config ) { config_add_key_value( config , ENKF_RERUN_KEY , false , CONFIG_BOOL); config_add_key_value( config , RERUN_START_KEY , false , CONFIG_INT); config_add_key_value( config , UPDATE_LOG_PATH_KEY , false , CONFIG_STRING); - config_add_key_value( config , MIN_REALIZATIONS_KEY , false , CONFIG_INT ); + config_add_key_value( config , MIN_REALIZATIONS_KEY , false , CONFIG_STRING ); config_add_key_value( config , MAX_RUNTIME_KEY , false , CONFIG_INT ); item = config_add_key_value( config , STOP_LONG_RUNNING_KEY, false, CONFIG_BOOL ); diff --git a/ThirdParty/Ert/devel/libenkf/src/analysis_iter_config.c b/ThirdParty/Ert/devel/libenkf/src/analysis_iter_config.c index 8f3216a3da..fd8c11b464 100644 --- a/ThirdParty/Ert/devel/libenkf/src/analysis_iter_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/analysis_iter_config.c @@ -32,50 +32,49 @@ struct analysis_iter_config_struct { - char * runpath_fmt; char * case_fmt; stringlist_type * storage; int num_iterations; + int num_iter_tries; + bool case_set; + bool num_iterations_set; }; void analysis_iter_config_set_num_iterations( analysis_iter_config_type * config , int num_iterations) { - config->num_iterations = num_iterations; + config->num_iterations = num_iterations; + config->num_iterations_set = true; } int analysis_iter_config_get_num_iterations( const analysis_iter_config_type * config ) { return config->num_iterations; } -/** - This should contain a format string with two %d modifiers, the - first will be replaced with the iteration number, and the second - with the realization number. The actual instantiation will happen - in a two step process, hence the last '%d' must be protected with - an extra '%'. -*/ +bool analysis_iter_config_num_iterations_set( const analysis_iter_config_type * config ) { + return config->num_iterations_set; +} + -void analysis_iter_config_set_runpath_fmt( analysis_iter_config_type * config , const char * runpath_fmt) { - util_safe_free( config->runpath_fmt ); - if (runpath_fmt != NULL) { - config->runpath_fmt = util_calloc( strlen(runpath_fmt ) + 2 , sizeof * config->runpath_fmt); - strcpy(config->runpath_fmt , runpath_fmt); - { - char * perc_ptr = strrchr( config->runpath_fmt , '%'); - memmove(&perc_ptr[1] , &perc_ptr[0] , strlen(perc_ptr) + 1); - perc_ptr[0] = '%'; - } - } +void analysis_iter_config_set_num_retries_per_iteration( analysis_iter_config_type * config , int num_iter_tries) { + config->num_iter_tries = num_iter_tries; } -char * analysis_iter_config_get_runpath_fmt( analysis_iter_config_type * config){ - return config->runpath_fmt; +int analysis_iter_config_get_num_retries_per_iteration( const analysis_iter_config_type * config ) { + return config->num_iter_tries; } + void analysis_iter_config_set_case_fmt( analysis_iter_config_type * config , const char * case_fmt) { config->case_fmt = util_realloc_string_copy( config->case_fmt , case_fmt ); + config->case_set = true; } + +bool analysis_iter_config_case_fmt_set( const analysis_iter_config_type * config ) { + return config->case_set; +} + + char * analysis_iter_config_get_case_fmt( analysis_iter_config_type * config) { return config->case_fmt; } @@ -83,34 +82,24 @@ char * analysis_iter_config_get_case_fmt( analysis_iter_config_type * config) { analysis_iter_config_type * analysis_iter_config_alloc() { analysis_iter_config_type * config = util_malloc( sizeof * config ); - config->runpath_fmt = NULL; - analysis_iter_config_set_runpath_fmt( config, DEFAULT_ANALYSIS_ITER_RUNPATH); config->case_fmt = NULL; analysis_iter_config_set_case_fmt( config, DEFAULT_ANALYSIS_ITER_CASE); - config->storage = stringlist_alloc_new(); + config->storage = stringlist_alloc_new(); analysis_iter_config_set_num_iterations( config , DEFAULT_ANALYSIS_NUM_ITERATIONS ); + analysis_iter_config_set_num_retries_per_iteration(config, DEFAULT_ITER_RETRY_COUNT); + + config->num_iterations_set = false; + config->case_set = false; return config; } void analysis_iter_config_free( analysis_iter_config_type * config ) { - util_safe_free( config->runpath_fmt ); util_safe_free( config->case_fmt ); stringlist_free( config->storage ); + util_safe_free( config ); } - - - -const char * analysis_iter_config_iget_runpath_fmt( analysis_iter_config_type * config , int iter) { - if (config->runpath_fmt != NULL) { - char * runpath_fmt = util_alloc_sprintf( config->runpath_fmt , iter ); - stringlist_append_owned_ref( config->storage , runpath_fmt ); - return runpath_fmt; - } else - return NULL; -} - const char * analysis_iter_config_iget_case( analysis_iter_config_type * config , int iter) { if (config->case_fmt != NULL) { char * fs_case = util_alloc_sprintf( config->case_fmt , iter ); @@ -122,9 +111,9 @@ const char * analysis_iter_config_iget_case( analysis_iter_config_type * config void analysis_iter_config_add_config_items( config_type * config ) { - config_add_key_value( config , ITER_CASE_KEY , false , CONFIG_STRING); - config_add_key_value( config , ITER_RUNPATH_KEY , false , CONFIG_STRING); - config_add_key_value( config , ITER_COUNT_KEY , false , CONFIG_INT); + config_add_key_value( config , ITER_CASE_KEY , false , CONFIG_STRING); + config_add_key_value( config , ITER_COUNT_KEY , false , CONFIG_INT); + config_add_key_value( config , ITER_RETRY_COUNT_KEY , false , CONFIG_INT); } @@ -132,11 +121,11 @@ void analysis_iter_config_init(analysis_iter_config_type * iter_config , const c if (config_item_set( config , ITER_CASE_KEY )) analysis_iter_config_set_case_fmt( iter_config , config_get_value( config , ITER_CASE_KEY )); - if (config_item_set( config , ITER_RUNPATH_KEY )) - analysis_iter_config_set_runpath_fmt( iter_config , config_get_value( config , ITER_RUNPATH_KEY )); - if (config_item_set( config , ITER_COUNT_KEY )) analysis_iter_config_set_num_iterations( iter_config , config_get_value_as_int( config , ITER_COUNT_KEY )); + + if (config_item_set( config , ITER_RETRY_COUNT_KEY )) + analysis_iter_config_set_num_retries_per_iteration( iter_config , config_get_value_as_int( config , ITER_RETRY_COUNT_KEY )); } diff --git a/ThirdParty/Ert/devel/libenkf/src/block_fs_driver.c b/ThirdParty/Ert/devel/libenkf/src/block_fs_driver.c index 8619ac1451..d1ef4f143c 100644 --- a/ThirdParty/Ert/devel/libenkf/src/block_fs_driver.c +++ b/ThirdParty/Ert/devel/libenkf/src/block_fs_driver.c @@ -43,6 +43,7 @@ struct bfs_config_struct { bool preload; int block_size; int max_cache_size; + bool bfs_lock; }; @@ -72,7 +73,7 @@ struct block_fs_driver_struct { /*****************************************************************/ -bfs_config_type * bfs_config_alloc( fs_driver_enum driver_type , bool read_only) { +bfs_config_type * bfs_config_alloc( fs_driver_enum driver_type , bool read_only, bool bfs_lock) { const int STATIC_blocksize = 64; const int PARAMETER_blocksize = 64; const int DYNAMIC_blocksize = 64; @@ -93,6 +94,7 @@ bfs_config_type * bfs_config_alloc( fs_driver_enum driver_type , bool read_only) config->fsync_interval = fsync_interval; config->fragmentation_limit = fragmentation_limit; config->read_only = read_only; + config->bfs_lock = bfs_lock; switch (driver_type) { case( DRIVER_PARAMETER ): @@ -127,6 +129,7 @@ static UTIL_SAFE_CAST_FUNCTION(bfs , BFS_TYPE_ID); static void bfs_close( bfs_type * bfs ) { if (bfs->block_fs != NULL) block_fs_close( bfs->block_fs , false); + free( bfs->mountfile ); free( bfs ); } @@ -158,7 +161,7 @@ static bfs_type * bfs_alloc_new( const bfs_config_type * config , char * mountfi } -static void bfs_mount( bfs_type * bfs ) { +static void bfs_mount( bfs_type * bfs) { const bfs_config_type * config = bfs->config; bfs->block_fs = block_fs_mount( bfs->mountfile , config->block_size , @@ -166,7 +169,8 @@ static void bfs_mount( bfs_type * bfs ) { config->fragmentation_limit , config->fsync_interval , config->preload , - config->read_only ); + config->read_only, + config->bfs_lock); } @@ -422,16 +426,16 @@ static block_fs_driver_type * block_fs_driver_alloc(int num_fs) { driver->__id = BLOCK_FS_DRIVER_ID; driver->num_fs = num_fs; - driver->fs_list = util_calloc( driver->num_fs , sizeof * driver->fs_list ); + driver->fs_list = util_calloc( driver->num_fs , sizeof * driver->fs_list ); return driver; } -static void * block_fs_driver_alloc_new( fs_driver_enum driver_type , bool read_only , int num_fs , const char * mountfile_fmt ) { - block_fs_driver_type * driver = block_fs_driver_alloc( num_fs ); - driver->config = bfs_config_alloc( driver_type , read_only ); +static void * block_fs_driver_alloc_new( fs_driver_enum driver_type , bool read_only , int num_fs , const char * mountfile_fmt, bool block_level_lock ) { + block_fs_driver_type * driver = block_fs_driver_alloc( num_fs); + driver->config = bfs_config_alloc( driver_type , read_only, block_level_lock ); { for (int ifs = 0; ifs < driver->num_fs; ifs++) driver->fs_list[ifs] = bfs_alloc_new( driver->config , util_alloc_sprintf( mountfile_fmt , ifs) ); @@ -443,7 +447,7 @@ static void * block_fs_driver_alloc_new( fs_driver_enum driver_type , bool read_ static void block_fs_driver_mount( block_fs_driver_type * driver ) { thread_pool_type * tp = thread_pool_alloc( 4 , true ); - for (int ifs = 0; ifs < driver->num_fs; ifs++) + for (int ifs = 0; ifs < driver->num_fs; ifs++) thread_pool_add_job( tp , bfs_mount__ , driver->fs_list[ ifs ]); thread_pool_join( tp ); @@ -490,11 +494,12 @@ void block_fs_driver_create_fs( FILE * stream , */ void * block_fs_driver_open(FILE * fstab_stream , const char * mount_point , fs_driver_enum driver_type , bool read_only) { - int num_fs = util_fread_int( fstab_stream ); - char * tmp_fmt = util_fread_alloc_string( fstab_stream ); - char * mountfile_fmt = util_alloc_sprintf("%s%c%s" , mount_point , UTIL_PATH_SEP_CHAR , tmp_fmt ); + int num_fs = util_fread_int( fstab_stream ); + char * tmp_fmt = util_fread_alloc_string( fstab_stream ); + char * mountfile_fmt = util_alloc_sprintf("%s%c%s" , mount_point , UTIL_PATH_SEP_CHAR , tmp_fmt ); + const bool block_level_lock = false; - block_fs_driver_type * driver = block_fs_driver_alloc_new( driver_type , read_only , num_fs , mountfile_fmt ); + block_fs_driver_type * driver = block_fs_driver_alloc_new( driver_type , read_only , num_fs , mountfile_fmt, block_level_lock ); block_fs_driver_mount( driver ); diff --git a/ThirdParty/Ert/devel/libenkf/src/block_obs.c b/ThirdParty/Ert/devel/libenkf/src/block_obs.c index 7515399bb6..89101d2166 100644 --- a/ThirdParty/Ert/devel/libenkf/src/block_obs.c +++ b/ThirdParty/Ert/devel/libenkf/src/block_obs.c @@ -25,6 +25,7 @@ #include #include +#include #include #include @@ -59,13 +60,13 @@ typedef struct { char * sum_key; } point_obs_type; +static UTIL_SAFE_CAST_FUNCTION(point_obs , POINT_OBS_TYPE_ID); struct block_obs_struct { UTIL_TYPE_ID_DECLARATION; char * obs_key; /** A user provided label for the observation. */ - int size; /** The number of field cells observed. */ - point_obs_type ** point_list; + vector_type * point_list; const ecl_grid_type * grid; const void * data_config; block_obs_source_type source_type; @@ -103,13 +104,21 @@ static point_obs_type * point_obs_alloc( block_obs_source_type source_type , i + + static void point_obs_free( point_obs_type * point_obs ) { util_safe_free( point_obs->sum_key ); free( point_obs ); } +static void point_obs_free__( void * arg ) { + point_obs_type * point_obs = point_obs_safe_cast( arg ); + point_obs_free( point_obs ); +} + -static double point_obs_measure( const point_obs_type * point_obs , const void * state , int iobs , node_id_type node_id) { + +static double point_obs_iget_data( const point_obs_type * point_obs , const void * state , int iobs , node_id_type node_id) { if (point_obs->source_type == SOURCE_FIELD) { const field_type * field = field_safe_cast_const( state ); return field_iget_double(field , point_obs->active_index); @@ -127,6 +136,15 @@ static double point_obs_measure( const point_obs_type * point_obs , const void * /*****************************************************************/ +static const point_obs_type * block_obs_iget_point_const( const block_obs_type * block_obs , int index) { + return vector_iget_const( block_obs->point_list , index ); +} + + +static point_obs_type * block_obs_iget_point( const block_obs_type * block_obs , int index) { + return vector_iget( block_obs->point_list , index ); +} + static void block_obs_validate_ijk( const ecl_grid_type * grid , int size, const int * i , const int * j , const int * k) { int l; @@ -141,68 +159,95 @@ static void block_obs_validate_ijk( const ecl_grid_type * grid , int size, const } } -static void block_obs_resize( block_obs_type * block_obs , int new_size) { - int i; - block_obs->point_list = util_realloc( block_obs->point_list , new_size * sizeof * block_obs->point_list ); - for (i=block_obs->size; i < new_size; i++) - block_obs->point_list[i] = NULL; +static void block_obs_append_point( block_obs_type * block_obs , point_obs_type * point) { + if (point->source_type == block_obs->source_type) + vector_append_owned_ref(block_obs->point_list , point , point_obs_free__); + else + util_abort("%s: fatal internal error - mixing points with different source type in one block_obs instance.\n",__func__); +} + - block_obs->size = new_size; +void block_obs_append_field_obs( block_obs_type * block_obs , int i , int j , int k , double value , double std) { + int active_index = ecl_grid_get_active_index3( block_obs->grid , i , j , k ); + point_obs_type * point_obs = point_obs_alloc( SOURCE_FIELD , i , j , k , active_index , NULL , value , std); + block_obs_append_point( block_obs , point_obs ); } -/** - The input vectors i,j,k should contain offset zero values. -*/ -block_obs_type * block_obs_alloc(const char * obs_key, - block_obs_source_type source_type , - const stringlist_type * summary_keys , + +void block_obs_append_summary_obs( block_obs_type * block_obs , int i , int j , int k , const char * sum_key , double value , double std) { + int active_index = ecl_grid_get_active_index3( block_obs->grid , i , j , k ); + point_obs_type * point_obs = point_obs_alloc( SOURCE_SUMMARY , i , j , k , active_index , sum_key , value , std); + block_obs_append_point( block_obs , point_obs ); +} + + +block_obs_type * block_obs_alloc(const char * obs_key, const void * data_config , - const ecl_grid_type * grid , - int size, - const int * i, - const int * j, - const int * k, - const double * obs_value, - const double * obs_std) -{ - block_obs_validate_ijk( grid , size , i,j,k); - + const ecl_grid_type * grid) { + if (!(field_config_is_instance( data_config ) || container_config_is_instance( data_config ))) + return NULL; + { block_obs_type * block_obs = util_malloc(sizeof * block_obs); - UTIL_TYPE_ID_INIT( block_obs , BLOCK_OBS_TYPE_ID ); + block_obs->obs_key = util_alloc_string_copy(obs_key); block_obs->data_config = data_config; - block_obs->source_type = source_type; - block_obs->size = 0; - block_obs->point_list = NULL; + block_obs->point_list = vector_alloc_new(); block_obs->grid = grid; - block_obs_resize( block_obs , size ); + + if (field_config_is_instance( data_config )) + block_obs->source_type = SOURCE_FIELD; + else + block_obs->source_type = SOURCE_SUMMARY; - { + return block_obs; + } +} + + + +/** + The input vectors i,j,k should contain offset zero values. +*/ +block_obs_type * block_obs_alloc_complete(const char * obs_key, + block_obs_source_type source_type , + const stringlist_type * summary_keys , + const void * data_config , + const ecl_grid_type * grid , + int size, + const int * i, + const int * j, + const int * k, + const double * obs_value, + const double * obs_std) +{ + block_obs_validate_ijk( grid , size , i,j,k); + { + block_obs_type * block_obs = block_obs_alloc( obs_key , data_config , grid ); + if (block_obs) { for (int l=0; l < size; l++) { - int active_index = ecl_grid_get_active_index3( block_obs->grid , i[l],j[l],k[l]); - const char * sum_key = NULL; - if (source_type == SOURCE_SUMMARY) - sum_key = stringlist_iget( summary_keys , l ); - - block_obs->point_list[l] = point_obs_alloc(source_type , i[l] , j[l] , k[l] , active_index , sum_key , obs_value[l] , obs_std[l]); + + if (source_type == SOURCE_SUMMARY) { + const char * sum_key = stringlist_iget( summary_keys , l ); + block_obs_append_summary_obs( block_obs , i[l] , j[l] , k[l] , sum_key , obs_value[l] , obs_std[l]); + } else + block_obs_append_field_obs( block_obs , i[l] , j[l] , k[l] , obs_value[l] , obs_std[l]); + } + return block_obs; + } else { + util_abort("%s: internal error - block_obs_alloc() returned NULL \n",__func__); + return NULL; } - return block_obs; } } void block_obs_free( block_obs_type * block_obs) { - for (int i=0; i < block_obs->size; i++) { - if (block_obs->point_list[i] != NULL) - point_obs_free( block_obs->point_list[i]); - } - - util_safe_free(block_obs->point_list ); + vector_free( block_obs->point_list ); free(block_obs->obs_key); free(block_obs); } @@ -213,22 +258,23 @@ void block_obs_free( block_obs_type * block_obs) { -void block_obs_get_observations(const block_obs_type * block_obs, obs_data_type * obs_data, int report_step , const active_list_type * __active_list) { +void block_obs_get_observations(const block_obs_type * block_obs, obs_data_type * obs_data, enkf_fs_type * fs, int report_step , const active_list_type * __active_list) { int i; - int active_size = active_list_get_active_size( __active_list , block_obs->size ); + int obs_size = block_obs_get_size( block_obs ); + int active_size = active_list_get_active_size( __active_list , obs_size); active_mode_type active_mode = active_list_get_mode( __active_list ); - obs_block_type * obs_block = obs_data_add_block( obs_data , block_obs->obs_key , block_obs->size , NULL , false ); + obs_block_type * obs_block = obs_data_add_block( obs_data , block_obs->obs_key , obs_size , NULL , false ); if (active_mode == ALL_ACTIVE) { - for (i=0; i < block_obs->size; i++) { - const point_obs_type * point_obs = block_obs->point_list[i]; + for (i=0; i < obs_size; i++) { + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , i ); obs_block_iset(obs_block , i , point_obs->value , point_obs->std ); } } else if (active_mode == PARTLY_ACTIVE) { const int * active_list = active_list_get_active( __active_list ); for (i =0 ; i < active_size; i++) { int iobs = active_list[i]; - const point_obs_type * point_obs = block_obs->point_list[iobs]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , i ); obs_block_iset(obs_block , iobs , point_obs->value , point_obs->std ); } } @@ -246,18 +292,25 @@ static void block_obs_assert_data( const block_obs_type * block_obs , const void } +double block_obs_iget_data( const block_obs_type * block_obs, const void * state , int iobs , node_id_type node_id ) { + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , iobs ); + return point_obs_iget_data( point_obs , state , iobs , node_id); +} + + + void block_obs_measure(const block_obs_type * block_obs, const void * state , node_id_type node_id , meas_data_type * meas_data , const active_list_type * __active_list) { block_obs_assert_data( block_obs , state ); { - int active_size = active_list_get_active_size( __active_list , block_obs->size ); - meas_block_type * meas_block = meas_data_add_block( meas_data , block_obs->obs_key , node_id.report_step , block_obs->size ); + int obs_size = block_obs_get_size( block_obs ); + int active_size = active_list_get_active_size( __active_list , obs_size ); + meas_block_type * meas_block = meas_data_add_block( meas_data , block_obs->obs_key , node_id.report_step , obs_size ); int iobs; active_mode_type active_mode = active_list_get_mode( __active_list ); if (active_mode == ALL_ACTIVE) { - for (iobs=0; iobs < block_obs->size; iobs++) { - const point_obs_type * point_obs = block_obs->point_list[iobs]; - double value = point_obs_measure( point_obs , state , iobs , node_id); + for (iobs=0; iobs < obs_size; iobs++) { + double value = block_obs_iget_data( block_obs , state , iobs , node_id ); meas_block_iset( meas_block , node_id.iens , iobs , value ); } } else if (active_mode == PARTLY_ACTIVE) { @@ -265,9 +318,8 @@ void block_obs_measure(const block_obs_type * block_obs, const void * state , no for (int i =0 ; i < active_size; i++) { iobs = active_list[i]; { - const point_obs_type * point_obs = block_obs->point_list[iobs]; - double value = point_obs_measure( point_obs , state , iobs , node_id); - meas_block_iset( meas_block , node_id.iens , point_obs->active_index , value ); + double value = block_obs_iget_data( block_obs , state , iobs , node_id); + meas_block_iset( meas_block , node_id.iens , i , value ); } } } @@ -278,9 +330,10 @@ void block_obs_measure(const block_obs_type * block_obs, const void * state , no double block_obs_chi2(const block_obs_type * block_obs, const field_type * field_state, node_id_type node_id) { double sum_chi2 = 0; - for (int i=0; i < block_obs->size; i++) { - const point_obs_type * point_obs = block_obs->point_list[i]; - double sim_value = point_obs_measure( point_obs , field_state , i, node_id ); + int obs_size = block_obs_get_size( block_obs ); + for (int i=0; i < obs_size; i++) { + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , i ); + double sim_value = point_obs_iget_data( point_obs , field_state , i, node_id ); double x = (sim_value - point_obs->value) / point_obs->std; sum_chi2 += x*x; } @@ -294,23 +347,33 @@ double block_obs_chi2(const block_obs_type * block_obs, const field_type * fiel The index is into the the number of active cells which are observed by this observation. */ void block_obs_iget(const block_obs_type * block_obs, int index , double *value , double * std) { - const point_obs_type * point_obs = block_obs->point_list[index]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index ); *value = point_obs->value; *std = point_obs->std; } +double block_obs_iget_value(const block_obs_type * block_obs, int index ){ + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index ); + return point_obs->value; +} + +double block_obs_iget_std(const block_obs_type * block_obs, int index ){ + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index ); + return point_obs->std; +} void block_obs_user_get(const block_obs_type * block_obs , const char * index_key , double *value , double * std, bool * valid) { int i,j,k; *valid = false; if (field_config_parse_user_key__( index_key , &i , &j , &k)) { + int obs_size = block_obs_get_size( block_obs ); int active_index = ecl_grid_get_active_index3(block_obs->grid , i,j,k); int l = 0; /* iterating through all the cells the observation is observing. */ - while (!(*valid) && l < block_obs->size) { - const point_obs_type * point_obs = block_obs->point_list[l]; + while (!(*valid) && l < obs_size) { + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , l); if (point_obs->active_index == active_index) { *value = point_obs->value; *std = point_obs->std; @@ -325,27 +388,31 @@ void block_obs_user_get(const block_obs_type * block_obs , const char * index_ke int block_obs_iget_i(const block_obs_type * block_obs, int index) { - const point_obs_type * point_obs = block_obs->point_list[index]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index); return point_obs->i; } int block_obs_iget_j(const block_obs_type * block_obs, int index) { - const point_obs_type * point_obs = block_obs->point_list[index]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index); return point_obs->j; } int block_obs_iget_k(const block_obs_type * block_obs, int index) { - const point_obs_type * point_obs = block_obs->point_list[index]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index); return point_obs->k; } +double block_obs_iget_depth( const block_obs_type * block_obs , int index) { + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , index); + return ecl_grid_get_cdepth3( block_obs->grid , point_obs->i , point_obs->j ,point_obs->k); +} /* Returns by reference i,j,k for observation point nr block_nr. */ void block_obs_iget_ijk(const block_obs_type * block_obs , int block_nr , int * i , int * j , int * k) { - const point_obs_type * point_obs = block_obs->point_list[block_nr]; + const point_obs_type * point_obs = block_obs_iget_point_const( block_obs , block_nr ); *i = point_obs->i; *j = point_obs->j; *k = point_obs->k; @@ -353,15 +420,14 @@ void block_obs_iget_ijk(const block_obs_type * block_obs , int block_nr , int * int block_obs_get_size(const block_obs_type * block_obs) { - return block_obs->size; + return vector_get_size( block_obs->point_list ); } void block_obs_scale_std(block_obs_type * block_obs, double scale_factor) { - for (int i = 0; i < block_obs->size; i++) { - if (block_obs->point_list[i] != NULL) { - point_obs_type * point_observation = block_obs->point_list[i]; - point_observation->std = point_observation->std * scale_factor; - } + int obs_size = block_obs_get_size( block_obs ); + for (int i = 0; i < obs_size; i++) { + point_obs_type * point_observation = block_obs_iget_point( block_obs , i ); + point_observation->std = point_observation->std * scale_factor; } } @@ -371,6 +437,9 @@ void block_obs_scale_std__(void * block_obs, double scale_factor) { } + + + /*****************************************************************/ VOID_FREE(block_obs) diff --git a/ThirdParty/Ert/devel/libenkf/src/container.c b/ThirdParty/Ert/devel/libenkf/src/container.c index 76f3d0da75..671a061f4e 100644 --- a/ThirdParty/Ert/devel/libenkf/src/container.c +++ b/ThirdParty/Ert/devel/libenkf/src/container.c @@ -55,6 +55,16 @@ const void * container_iget_node(const container_type * container , int index) { return vector_iget_const( container->nodes , index ); } +int container_get_size( const container_type * container ) { + return vector_get_size( container->nodes ); +} + +void container_assert_size( const container_type * container ) { + if (vector_get_size( container->nodes ) != container_config_get_size( container->config )) + util_abort("%s: container size mismatch. Current:%d Config:%d \n",__func__ , container_get_size( container ) , container_config_get_size( container->config )); +} + + /******************************************************************/ /* Anonumously generated functions used by the enkf_node object */ /******************************************************************/ diff --git a/ThirdParty/Ert/devel/libenkf/src/container_config.c b/ThirdParty/Ert/devel/libenkf/src/container_config.c index 9c7f96e7c3..50d37243c9 100644 --- a/ThirdParty/Ert/devel/libenkf/src/container_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/container_config.c @@ -31,6 +31,7 @@ struct container_config_struct { vector_type * nodes; }; +UTIL_IS_INSTANCE_FUNCTION(container_config , CONTAINER_CONFIG_TYPE_ID); container_config_type * container_config_alloc( const char * key ) { container_config_type * container = util_malloc( sizeof * container ); diff --git a/ThirdParty/Ert/devel/libenkf/src/ecl_config.c b/ThirdParty/Ert/devel/libenkf/src/ecl_config.c index 9da30544c5..1fc1d36980 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ecl_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/ecl_config.c @@ -77,6 +77,7 @@ struct ecl_config_struct int last_history_restart; bool can_restart; /* Have we found the tag in the data file? */ int num_cpu; /* We should parse the ECLIPSE data file and determine how many cpus this eclipse file needs. */ + ecl_unit_enum unit_system; /* Either metric, field or lab */ }; /*****************************************************************/ @@ -151,6 +152,7 @@ void ecl_config_set_data_file(ecl_config_type * ecl_config, const char * data_fi } ecl_config->start_date = ecl_util_get_start_date(ecl_config->data_file); ecl_config->num_cpu = ecl_util_get_num_cpu(ecl_config->data_file); + ecl_config->unit_system = ecl_util_get_unit_set(ecl_config->data_file); } @@ -246,9 +248,11 @@ ui_return_type * ecl_config_validate_schedule_file(const ecl_config_type * ecl_c changed either ...) */ -void ecl_config_set_schedule_file(ecl_config_type * ecl_config, const char * schedule_file) +void ecl_config_set_schedule_file(ecl_config_type * ecl_config, const char * schedule_file, const char * schedule_target_file) { - { + if (schedule_target_file) + ecl_config->schedule_target_file = util_alloc_string_copy(schedule_target_file); + else { char * base; /* The schedule target file will be without any path component */ char * ext; util_alloc_file_components(schedule_file, NULL, &base, &ext); @@ -516,6 +520,7 @@ ecl_config_type * ecl_config_alloc() ecl_config->static_kw_set = set_alloc_empty(); ecl_config->user_static_kw = stringlist_alloc_new(); ecl_config->num_cpu = 1; /* This must get a valid default in case no ECLIPSE datafile is provided. */ + ecl_config->unit_system = ECL_METRIC_UNITS; ecl_config->data_file = NULL; ecl_config->input_init_section = NULL; ecl_config->init_section = NULL; @@ -539,7 +544,7 @@ void ecl_config_init(ecl_config_type * ecl_config, const config_type * config) ui_return_type * ui_return = ecl_config_validate_eclbase(ecl_config, config_iget(config, ECLBASE_KEY, 0, 0)); if (ui_return_get_status(ui_return) == UI_RETURN_OK) ecl_config_set_eclbase(ecl_config, config_iget(config, ECLBASE_KEY, 0, 0)); - else + else util_abort("%s: failed to set eclbase format. Error:%s\n", __func__ , ui_return_get_last_error(ui_return)); ui_return_free(ui_return); } @@ -556,9 +561,18 @@ void ecl_config_init(ecl_config_type * ecl_config, const config_type * config) } if (config_item_set(config, SCHEDULE_FILE_KEY)) { + const char * schedule_target_file = config_safe_iget(config, SCHEDULE_FILE_KEY, 0, 1); + if (schedule_target_file) { + ui_return_type * ui_return_sched_target_file = ecl_config_validate_schedule_file(ecl_config, schedule_target_file); + if (!ui_return_get_status(ui_return_sched_target_file) == UI_RETURN_OK) { + util_abort("%s: failed to set target schedule file. Error:%s\n",__func__ , ui_return_get_last_error(ui_return_sched_target_file)); + } + ui_return_free(ui_return_sched_target_file); + } + ui_return_type * ui_return = ecl_config_validate_schedule_file(ecl_config, config_iget(config, SCHEDULE_FILE_KEY, 0, 0)); if (ui_return_get_status(ui_return) == UI_RETURN_OK) - ecl_config_set_schedule_file(ecl_config, config_iget(config, SCHEDULE_FILE_KEY, 0, 0)); + ecl_config_set_schedule_file(ecl_config, config_iget(config, SCHEDULE_FILE_KEY, 0, 0), schedule_target_file); else util_abort("%s: failed to set schedule file. Error:%s\n",__func__ , ui_return_get_last_error(ui_return)); @@ -863,7 +877,7 @@ void ecl_config_add_config_items(config_type * config) config_schema_item_type * item; item = config_add_schema_item(config, SCHEDULE_FILE_KEY, false); - config_schema_item_set_argc_minmax(item, 1, 1); + config_schema_item_set_argc_minmax(item, 1, 2); config_schema_item_iset_type(item, 0, CONFIG_EXISTING_PATH); /* Observe that SCHEDULE_PREDICTION_FILE - which is implemented as a @@ -992,3 +1006,35 @@ void ecl_config_fprintf_config(const ecl_config_type * ecl_config, FILE * stream fprintf(stream, "\n\n"); } + +/* Units as specified in the ECLIPSE technical manual */ +const char * ecl_config_get_depth_unit(const ecl_config_type * ecl_config) +{ + switch(ecl_config->unit_system) { + case ECL_METRIC_UNITS: + return "M"; + case ECL_FIELD_UNITS: + return "FT"; + case ECL_LAB_UNITS: + return "CM"; + default: + util_abort("%s: unit system enum value:%d not recognized \n",__func__ , ecl_config->unit_system); + return NULL; + } +} + + +const char * ecl_config_get_pressure_unit(const ecl_config_type * ecl_config) +{ + switch(ecl_config->unit_system) { + case ECL_METRIC_UNITS: + return "BARSA"; + case ECL_FIELD_UNITS: + return "PSIA"; + case ECL_LAB_UNITS: + return "ATMA"; + default: + util_abort("%s: unit system enum value:%d not recognized \n",__func__ , ecl_config->unit_system); + return NULL; + } +} diff --git a/ThirdParty/Ert/devel/libenkf/src/ecl_static_kw.c b/ThirdParty/Ert/devel/libenkf/src/ecl_static_kw.c index a36ccc3bed..6bfe378bf3 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ecl_static_kw.c +++ b/ThirdParty/Ert/devel/libenkf/src/ecl_static_kw.c @@ -26,7 +26,7 @@ #include #include #include - +#include struct ecl_static_kw_struct { @@ -85,7 +85,7 @@ void ecl_static_kw_init(ecl_static_kw_type * ecl_static_kw, const ecl_kw_type * -void ecl_static_kw_read_from_buffer(ecl_static_kw_type * ecl_static_kw , buffer_type * buffer, int report_step, state_enum state) { +void ecl_static_kw_read_from_buffer(ecl_static_kw_type * ecl_static_kw , buffer_type * buffer, enkf_fs_type * fs, int report_step, state_enum state) { enkf_util_assert_buffer_type( buffer , STATIC ); if (ecl_static_kw->ecl_kw != NULL) util_abort("%s: internal error: trying to assign ecl_kw to ecl_static_kw which is already set.\n",__func__); @@ -100,7 +100,7 @@ static void ecl_static_kw_free_data(ecl_static_kw_type * kw) { /** - The ecl_kw instance is discarded immediately after writing to disk· + The ecl_kw instance is discarded immediately after writing to disk� For both ecl_write and internal storage. */ diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_analysis.c b/ThirdParty/Ert/devel/libenkf/src/enkf_analysis.c index 384e17c0bf..5abc965d25 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_analysis.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_analysis.c @@ -117,7 +117,7 @@ void enkf_analysis_deactivate_outliers(obs_data_type * obs_data , meas_data_type for (iobs =0; iobs < meas_block_get_total_size( meas_block ); iobs++) { if (meas_block_iget_active( meas_block , iobs )) { double ens_std = meas_block_iget_ens_std( meas_block , iobs ); - if (ens_std < std_cutoff) { + if (ens_std <= std_cutoff) { /* De activated because the ensemble has to small variation for this particular measurement. @@ -147,6 +147,31 @@ void enkf_analysis_deactivate_outliers(obs_data_type * obs_data , meas_data_type } } +void enkf_analysis_deactivate_std_zero(obs_data_type * obs_data , meas_data_type * meas_data) { + + for (int block_nr =0; block_nr < obs_data_get_num_blocks( obs_data ); block_nr++) { + obs_block_type * obs_block = obs_data_iget_block( obs_data , block_nr); + meas_block_type * meas_block = meas_data_iget_block( meas_data , block_nr ); + + meas_block_calculate_ens_stats( meas_block ); + { + int iobs; + for (iobs =0; iobs < meas_block_get_total_size( meas_block ); iobs++) { + if (meas_block_iget_active( meas_block , iobs )) { + double ens_std = meas_block_iget_ens_std( meas_block , iobs ); + if (ens_std <= 0.0) { + /* + De activated because the ensemble has to small + variation for this particular measurement. + */ + obs_block_deactivate( obs_block , iobs , "No ensemble variation"); + meas_block_deactivate( meas_block , iobs ); + } + } + } + } + } +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_config_node.c b/ThirdParty/Ert/devel/libenkf/src/enkf_config_node.c index e0a6ea482c..e83868547f 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_config_node.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_config_node.c @@ -22,6 +22,7 @@ #include #include +#include #include #include #include @@ -72,13 +73,20 @@ struct enkf_config_node_struct { }; +UTIL_IS_INSTANCE_FUNCTION( enkf_config_node , ENKF_CONFIG_NODE_TYPE_ID ) + static bool enkf_config_node_has_container(const enkf_config_node_type * node , enkf_fs_type * fs , node_id_type node_id) { bool has_container = true; - for (int inode=0; inode < vector_get_size( node->container_nodes ); inode++) { enkf_config_node_type * child_node = vector_iget( node->container_nodes , inode ); - if (!enkf_config_node_has_node( child_node , fs , node_id )) { + bool has_child; + if (child_node->vector_storage) + has_child = enkf_config_node_has_vector( child_node , fs , node_id.iens , node_id.state); + else + has_child = enkf_config_node_has_node( child_node , fs , node_id ); + + if (!has_child) { has_container = false; break; } @@ -91,7 +99,7 @@ static bool enkf_config_node_has_container(const enkf_config_node_type * node , bool enkf_config_node_has_node( const enkf_config_node_type * node , enkf_fs_type * fs , node_id_type node_id) { if (node->impl_type == CONTAINER) return enkf_config_node_has_container( node , fs , node_id ); - else + else return enkf_fs_has_node( fs , node->key , node->var_type , node_id.report_step , node_id.iens , node_id.state ); } @@ -277,6 +285,8 @@ enkf_config_node_type * enkf_config_node_alloc(enkf_var_type var_ty + + void enkf_config_node_update_gen_kw( enkf_config_node_type * config_node , const char * enkf_outfile_fmt , /* The include file created by ERT for the forward model. */ const char * template_file , @@ -329,14 +339,78 @@ enkf_config_node_type * enkf_config_node_alloc_summary( const char * key , load_ } -/*****************************************************************/ -enkf_config_node_type * enkf_config_node_new_gen_data( const char * key , bool forward_init) { - enkf_config_node_type * config_node = enkf_config_node_alloc__( INVALID , GEN_DATA , key , forward_init); - config_node->data = gen_data_config_alloc_empty( key ); + +enkf_config_node_type * enkf_config_node_alloc_GEN_PARAM( const char * node_key , + bool forward_init , + gen_data_file_format_type input_format , + gen_data_file_format_type output_format , + const char * init_file_fmt , + const char * ert_outfile_fmt) { + + + enkf_config_node_type * config_node = enkf_config_node_alloc__( PARAMETER , GEN_DATA , node_key , forward_init ); + config_node->data = gen_data_config_alloc_GEN_PARAM( node_key , output_format , input_format); + + enkf_config_node_update( config_node , /* Generic update - needs the format settings from the special.*/ + init_file_fmt , + ert_outfile_fmt , + NULL , + NULL ); + + return config_node; +} + + + + +enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_result( const char * key , + gen_data_file_format_type input_format, + const char * enkf_infile_fmt ) { + + enkf_config_node_type * config_node = enkf_config_node_alloc__( DYNAMIC_RESULT , GEN_DATA , key , false); + config_node->data = gen_data_config_alloc_GEN_DATA_result( key , input_format ); + + enkf_config_node_update( config_node , /* Generic update - needs the format settings from the special.*/ + NULL , + NULL , + enkf_infile_fmt , + NULL ); + return config_node; } + +enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_state( const char * key, + bool forward_init , + gen_data_file_format_type input_format, + gen_data_file_format_type output_format, + const char * init_file_fmt , + const char * template_ecl_file , + const char * template_data_key , + const char * enkf_outfile_fmt , + const char * enkf_infile_fmt , + const char * min_std_file) { + + if (gen_data_config_valid_result_format( enkf_infile_fmt )) { + enkf_config_node_type * config_node = enkf_config_node_alloc__( DYNAMIC_STATE , GEN_DATA , key , forward_init); + config_node->data = gen_data_config_alloc_GEN_DATA_state( key , output_format , input_format ); + + enkf_config_node_update(config_node , /* Generic update - needs the format settings from the special.*/ + init_file_fmt , + enkf_outfile_fmt , + enkf_infile_fmt, + min_std_file); + + return config_node; + } else { + fprintf(stderr, "** ERROR: The RESULT_FILE setting for %s is invalid - must have an embedded %%d - and be a relative path.\n" , key ); + return NULL; + } +} + + + /*****************************************************************/ enkf_config_node_type * enkf_config_node_new_container( const char * key ) { @@ -347,6 +421,7 @@ enkf_config_node_type * enkf_config_node_new_container( const char * key ) { void enkf_config_node_update_container( enkf_config_node_type * config_node , const enkf_config_node_type * child_node) { vector_append_ref( config_node->container_nodes , child_node ); + container_config_add_node( config_node->data , child_node ); } const char * enkf_config_node_iget_container_key( const enkf_config_node_type * config_node , int index) { @@ -361,9 +436,9 @@ const char * enkf_config_node_iget_container_key( const enkf_config_node_type * This will create a new gen_kw_config instance which is NOT yet valid. Mainly support code for the GUI. */ -enkf_config_node_type * enkf_config_node_new_field( const char * key , ecl_grid_type * ecl_grid, field_trans_table_type * trans_table, bool forward_init) { +enkf_config_node_type * enkf_config_node_alloc_field( const char * key , ecl_grid_type * ecl_grid, field_trans_table_type * trans_table, bool forward_init) { enkf_config_node_type * config_node = enkf_config_node_alloc__( INVALID , FIELD , key , forward_init); - config_node->data = field_config_alloc_empty( key , ecl_grid , trans_table ); + config_node->data = field_config_alloc_empty( key , ecl_grid , trans_table, false ); return config_node; } @@ -449,72 +524,6 @@ void enkf_config_node_update_general_field( enkf_config_node_type * config_node /*****************************************************************/ -void enkf_config_node_update_gen_data( enkf_config_node_type * config_node, - gen_data_file_format_type input_format, - gen_data_file_format_type output_format, - const char * init_file_fmt , - const char * template_ecl_file , - const char * template_data_key , - const char * enkf_outfile_fmt , - const char * enkf_infile_fmt , - const char * min_std_file) { - - { - enkf_var_type var_type = INVALID_VAR; - /* - The var type parameter is determined by inspecting the - combination of input parameters. It is possible to specify an - invalid input combination; that should be identified with a call - to gen_data_config_is_valid() in the calling scope. - - - PARAMETER: init_file_fmt != NULL - enkf_outfile_fmt != NULL - enkf_infile_fmt == NULL - - DYNAMIC_STATE: init_file_fmt != NULL - enkf_outfile_fmt != NULL - enkf_infile_fmt != NULL - - DYNAMIC_RESULT: init_file_fmt == NULL - enkf_outfile_fmt == NULL - enkf_infile_fmt != NULL - - */ - - if ((init_file_fmt != NULL) && (enkf_outfile_fmt != NULL) && (enkf_infile_fmt == NULL)) var_type = PARAMETER; - - if ((init_file_fmt != NULL) && (enkf_outfile_fmt != NULL) && (enkf_infile_fmt != NULL)) var_type = DYNAMIC_STATE; - - if ((init_file_fmt == NULL) && (enkf_outfile_fmt == NULL) && (enkf_infile_fmt != NULL)) var_type = DYNAMIC_RESULT; - - config_node->var_type = var_type; /* Can be stuck with INVALID_VAR */ - } - - if (enkf_infile_fmt) - if (util_int_format_count(enkf_infile_fmt) != 1) - util_abort("%s: Fatal error when updating GEN_DATA key:%s the enkf_infile_fmt must contain exactly one %%d format specifier \n" , enkf_config_node_get_key( config_node )); - - - if (config_node->var_type != INVALID_VAR) { - gen_data_config_update(config_node->data , /* Special update */ - config_node->var_type , - input_format , - output_format , - template_ecl_file , - template_data_key); - - enkf_config_node_update( config_node , /* Generic update - needs the format settings from the special.*/ - init_file_fmt , - enkf_outfile_fmt , - enkf_infile_fmt, - min_std_file); - } - -} - -/*****************************************************************/ - enkf_config_node_type * enkf_config_node_container_iget( const enkf_config_node_type * node , int index) { return vector_iget( node->container_nodes , index ); } @@ -539,7 +548,7 @@ int enkf_config_node_get_data_size( const enkf_config_node_type * node , int rep void enkf_config_node_free(enkf_config_node_type * node) { /* Freeing the underlying node object. */ - if (node->freef != NULL) node->freef(node->data); + if (node->freef != NULL) node->freef(node->data); free(node->key); stringlist_free(node->obs_keys); @@ -831,6 +840,179 @@ void enkf_config_node_fprintf_config( const enkf_config_node_type * config_node } fprintf( stream , "\n"); } +/*****************************************************************/ + +void enkf_config_node_add_GEN_PARAM_config_schema( config_type * config ) { + config_schema_item_type * item; + item = config_add_schema_item(config , GEN_PARAM_KEY , false ); + config_schema_item_set_argc_minmax(item , 2 , CONFIG_DEFAULT_ARG_MAX); +} + + +void enkf_config_node_add_GEN_DATA_config_schema( config_type * config ) { + config_schema_item_type * item; + item = config_add_schema_item(config , GEN_DATA_KEY , false ); + config_schema_item_set_argc_minmax(item , 1 , CONFIG_DEFAULT_ARG_MAX); +} + + + +enkf_config_node_type * enkf_config_node_alloc_GEN_DATA_from_config( const config_content_node_type * node ) { + enkf_config_node_type * config_node = NULL; + const char * node_key = config_content_node_iget( node , 0 ); + { + hash_type * options = hash_alloc(); + + config_content_node_init_opt_hash( node , options , 1 ); + { + gen_data_file_format_type input_format = gen_data_config_check_format( hash_safe_get( options , INPUT_FORMAT_KEY)); + gen_data_file_format_type output_format = gen_data_config_check_format( hash_safe_get( options , OUTPUT_FORMAT_KEY)); + const char * init_file_fmt = hash_safe_get( options , INIT_FILES_KEY); + const char * ecl_file = hash_safe_get( options , ECL_FILE_KEY); + const char * template = hash_safe_get( options , TEMPLATE_KEY); + const char * data_key = hash_safe_get( options , KEY_KEY); + const char * result_file = hash_safe_get( options , RESULT_FILE_KEY); + const char * min_std_file = hash_safe_get( options , MIN_STD_KEY); + const char * forward_string = hash_safe_get( options , FORWARD_INIT_KEY ); + const char * report_steps_string = hash_safe_get( options , REPORT_STEPS_KEY ); + int_vector_type * report_steps = int_vector_alloc(0,0); + bool forward_init = false; + bool valid_input = true; + + if (input_format == GEN_DATA_UNDEFINED) + valid_input = false; + + if (!gen_data_config_valid_result_format( result_file )) { + fprintf(stderr, "** ERROR: The RESULT_FILE:%s setting for %s is invalid - must have an embedded %%d - and be a relative path.\n" , result_file , node_key ); + valid_input = false; + } + + if (report_steps_string) { + if (!string_util_update_active_list( report_steps_string , report_steps )) { + valid_input = false; + fprintf(stderr,"** ERROR: The REPORT_STEPS:%s attribute was not valid.\n",report_steps_string); + } + } else { + fprintf(stderr,"** ERROR: As of July 2014 the GEN_DATA keywords must have a REPORT_STEPS:xxxx \n"); + fprintf(stderr," attribute to indicate which report step(s) you want to load data \n"); + fprintf(stderr," from. By requiring the user to enter this information in advance\n"); + fprintf(stderr," it is easier for ERT for to check that the results are valid, and\n"); + fprintf(stderr," handle errors with the GEN_DATA results gracefully.\n"); + fprintf(stderr," \n"); + fprintf(stderr," You can list several report steps separated with ',' and ranges with '-' \n"); + fprintf(stderr," but observe that spaces is NOT ALLOWED. \n"); + fprintf(stderr," \n"); + fprintf(stderr," - load from report step 100: REPORT_STEPS:100 \n"); + fprintf(stderr," - load from report steps 10, 20 and 30-40 REPORT_STEPS:10,20,30-40 \n"); + fprintf(stderr," \n"); + fprintf(stderr," The GEN_DATA keyword: %s will be ignored\n",node_key); + valid_input = false; + } + + if (valid_input) { + + if (forward_string) { + if (!util_sscanf_bool( forward_string , &forward_init)) + fprintf(stderr,"** Warning: parsing %s as bool failed - using FALSE \n",forward_string); + } + + if ((init_file_fmt == NULL) && + (ecl_file == NULL) && + (result_file != NULL)) + config_node = enkf_config_node_alloc_GEN_DATA_result( node_key , input_format , result_file); + else if ((init_file_fmt != NULL) && + (ecl_file != NULL) && + (result_file != NULL)) + config_node = enkf_config_node_alloc_GEN_DATA_state( node_key , + forward_init , + input_format , + output_format , + init_file_fmt , + template , + data_key , + ecl_file , + result_file , + min_std_file); + + { + gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); + + if (template) + gen_data_config_set_template( gen_data_config , template , data_key); + + for (int i=0; i < int_vector_size( report_steps ); i++) { + int report_step = int_vector_iget( report_steps , i ); + gen_data_config_add_report_step( gen_data_config , report_step); + enkf_config_node_set_internalize( config_node , report_step ); + } + } + } + + int_vector_free( report_steps ); + } + hash_free( options ); + } + + return config_node; +} + + +enkf_config_node_type * enkf_config_node_alloc_GEN_PARAM_from_config( const config_content_node_type * node ) { + enkf_config_node_type * config_node = NULL; + const char * node_key = config_content_node_iget( node , 0 ); + const char * ecl_file = config_content_node_iget( node , 1 ); + { + hash_type * options = hash_alloc(); + + config_content_node_init_opt_hash( node , options , 2 ); + { + gen_data_file_format_type input_format = gen_data_config_check_format( hash_safe_get( options , INPUT_FORMAT_KEY)); + gen_data_file_format_type output_format = gen_data_config_check_format( hash_safe_get( options , OUTPUT_FORMAT_KEY)); + const char * init_file_fmt = hash_safe_get( options , INIT_FILES_KEY); + const char * template = hash_safe_get( options , TEMPLATE_KEY); + const char * data_key = hash_safe_get( options , KEY_KEY); + const char * min_std_file = hash_safe_get( options , MIN_STD_KEY); + const char * forward_string = hash_safe_get( options , FORWARD_INIT_KEY ); + bool forward_init = false; + bool valid_input = true; + + + if (input_format == GEN_DATA_UNDEFINED) + valid_input = false; + + if (input_format == ASCII_TEMPLATE) + valid_input = false; + + if (output_format == GEN_DATA_UNDEFINED) + valid_input = false; + + if (init_file_fmt == NULL) + valid_input = false; + + if (valid_input) { + + if (forward_string) { + if (!util_sscanf_bool( forward_string , &forward_init)) + fprintf(stderr,"** Warning: parsing %s as bool failed - using FALSE \n",forward_string); + } + + config_node = enkf_config_node_alloc_GEN_PARAM( node_key , forward_init , input_format , output_format , init_file_fmt , ecl_file); + + if (template) { + bool template_set_ok = gen_data_config_set_template( enkf_config_node_get_ref( config_node ) , template , data_key); + if (!template_set_ok) + fprintf(stderr,"** Warning: the template settings were not applied correctly - ignored\n"); + } + + if (min_std_file) + enkf_config_node_update_min_std( config_node , min_std_file ); + + } + } + hash_free( options ); + } + return config_node; +} /*****************************************************************/ diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c index 02b2218760..e2cc90fffb 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c @@ -24,6 +24,7 @@ #include #include #include +#include #include #include @@ -215,7 +216,9 @@ struct enkf_fs_struct { char * root_path; char * mount_point; // mount_point = root_path / case_name; the mount_point is the fundamental INPUT. - + char * lock_file; + int lock_fd; + fs_driver_type * dynamic_forecast; fs_driver_type * dynamic_analyzed; fs_driver_type * parameter; @@ -246,28 +249,44 @@ struct enkf_fs_struct { UTIL_SAFE_CAST_FUNCTION( enkf_fs , ENKF_FS_TYPE_ID) UTIL_IS_INSTANCE_FUNCTION( enkf_fs , ENKF_FS_TYPE_ID) -static int enkf_fs_incref( enkf_fs_type * fs ) { +static void enkf_fs_umount( enkf_fs_type * fs ); + +int enkf_fs_incref( enkf_fs_type * fs ) { fs->refcount++; return fs->refcount; } -static int enkf_fs_decref( enkf_fs_type * fs ) { + +int enkf_fs_decref( enkf_fs_type * fs ) { + int refcount; fs->refcount--; + refcount = fs->refcount; + if (fs->refcount < 0) util_abort("%s: internal fuckup. The filesystem refcount:%d is < 0 \n",__func__ , fs->refcount); - return fs->refcount; + + if (refcount == 0) + enkf_fs_umount( fs ); + + return refcount; } + int enkf_fs_get_refcount( const enkf_fs_type * fs ) { return fs->refcount; } +enkf_fs_type * enkf_fs_get_ref( enkf_fs_type * fs ) { + enkf_fs_incref( fs ); + return fs; +} + -static enkf_fs_type * enkf_fs_alloc_empty( const char * mount_point , bool read_only) { +static enkf_fs_type * enkf_fs_alloc_empty( const char * mount_point ) { enkf_fs_type * fs = util_malloc(sizeof * fs ); UTIL_TYPE_ID_INIT( fs , ENKF_FS_TYPE_ID ); - fs->time_map = time_map_alloc(); + fs->time_map = time_map_alloc( ); fs->cases_config = cases_config_alloc(); fs->state_map = state_map_alloc(); fs->misfit_ensemble = misfit_ensemble_alloc(); @@ -276,9 +295,11 @@ static enkf_fs_type * enkf_fs_alloc_empty( const char * mount_point , bool read_ fs->parameter = NULL; fs->dynamic_forecast = NULL; fs->dynamic_analyzed = NULL; - fs->read_only = read_only; + fs->read_only = true; fs->mount_point = util_alloc_string_copy( mount_point ); fs->refcount = 0; + fs->lock_fd = 0; + if (mount_point == NULL) util_abort("%s: fatal internal error: mount_point == NULL \n",__func__); { @@ -288,7 +309,15 @@ static enkf_fs_type * enkf_fs_alloc_empty( const char * mount_point , bool read_ util_path_split( fs->mount_point , &path_len , &path_tmp); fs->case_name = util_alloc_string_copy( path_tmp[path_len - 1]); fs->root_path = util_alloc_joined_string( (const char **) path_tmp , path_len , UTIL_PATH_SEP_STRING); - + fs->lock_file = util_alloc_filename( fs->mount_point , fs->case_name , "lock"); + + if (util_try_lockf( fs->lock_file , S_IWUSR + S_IWGRP , &fs->lock_fd)) { + fs->read_only = false; + } else { + fprintf(stderr," Another program has already opened filesystem read-write - this instance will be UNSYNCRONIZED read-only. Cross your fingers ....\n"); + fs->read_only = true; + } + util_free_stringlist( path_tmp , path_len ); } return fs; @@ -400,13 +429,15 @@ static void enkf_fs_assign_driver( enkf_fs_type * fs , fs_driver_type * driver , } -static enkf_fs_type * enkf_fs_mount_block_fs( FILE * fstab_stream , const char * mount_point , bool read_only ) { - enkf_fs_type * fs = enkf_fs_alloc_empty( mount_point , read_only ); +static enkf_fs_type * enkf_fs_mount_block_fs( FILE * fstab_stream , const char * mount_point ) { + enkf_fs_type * fs = enkf_fs_alloc_empty( mount_point ); + { int driver_nr; for (driver_nr = 0; driver_nr < 5; driver_nr++) { fs_driver_enum driver_type = util_fread_int( fstab_stream ); - fs_driver_type * driver = block_fs_driver_open( fstab_stream , mount_point , driver_type , read_only); + + fs_driver_type * driver = block_fs_driver_open( fstab_stream , mount_point , driver_type , fs->read_only); enkf_fs_assign_driver( fs , driver , driver_type ); } @@ -415,8 +446,8 @@ static enkf_fs_type * enkf_fs_mount_block_fs( FILE * fstab_stream , const char } -static enkf_fs_type * enkf_fs_mount_plain( FILE * fstab_stream , const char * mount_point , bool read_only ) { - enkf_fs_type * fs = enkf_fs_alloc_empty( mount_point , read_only); +static enkf_fs_type * enkf_fs_mount_plain( FILE * fstab_stream , const char * mount_point ) { + enkf_fs_type * fs = enkf_fs_alloc_empty( mount_point ); { int driver_nr; for (driver_nr = 0; driver_nr < 5; driver_nr++) { @@ -507,6 +538,18 @@ state_map_type * enkf_fs_alloc_readonly_state_map( const char * mount_point ) { } +time_map_type * enkf_fs_alloc_readonly_time_map( const char * mount_point ) { + path_fmt_type * path_fmt = path_fmt_alloc_directory_fmt( DEFAULT_CASE_PATH ); + char * filename = path_fmt_alloc_file( path_fmt , false , mount_point , TIME_MAP_FILE); + + time_map_type * time_map = time_map_fread_alloc_readonly( filename ); + + path_fmt_free( path_fmt ); + free( filename ); + return time_map; +} + + static void enkf_fs_fread_misfit( enkf_fs_type * fs ) { FILE * stream = enkf_fs_open_excase_file( fs , MISFIT_ENSEMBLE_FILE ); @@ -526,25 +569,12 @@ static void enkf_fs_fwrite_misfit( enkf_fs_type * fs ) { } -enkf_fs_type * enkf_fs_get_weakref( enkf_fs_type * fs ) { - return fs; -} -enkf_fs_type * enkf_fs_get_ref( enkf_fs_type * fs ) { - if (enkf_fs_is_instance( fs )) { - enkf_fs_incref( fs ); - return fs; - } else { - util_abort("%s: tried to get enkf_fs reference from object which was not an existing enkf_fs reference\n",__func__); - return NULL; - } -} - -enkf_fs_type * enkf_fs_mount( const char * mount_point , bool read_only) { +enkf_fs_type * enkf_fs_mount( const char * mount_point ) { FILE * stream = fs_driver_open_fstab( mount_point , false ); if (stream != NULL) { @@ -556,10 +586,10 @@ enkf_fs_type * enkf_fs_mount( const char * mount_point , bool read_only) { switch( driver_id ) { case( BLOCK_FS_DRIVER_ID ): - fs = enkf_fs_mount_block_fs( stream , mount_point , read_only ); + fs = enkf_fs_mount_block_fs( stream , mount_point); break; case( PLAIN_DRIVER_ID ): - fs = enkf_fs_mount_plain( stream , mount_point , read_only ); + fs = enkf_fs_mount_plain( stream , mount_point ); break; default: util_abort("%s: unrecognized driver_id:%d \n",__func__ , driver_id ); @@ -572,16 +602,17 @@ enkf_fs_type * enkf_fs_mount( const char * mount_point , bool read_only) { enkf_fs_fread_state_map( fs ); enkf_fs_fread_misfit( fs ); - return enkf_fs_get_ref( fs ); + enkf_fs_get_ref( fs ); + return fs; } return NULL; } -bool enkf_fs_exists( const char * path ) { +bool enkf_fs_exists( const char * mount_point ) { bool exists = false; - FILE * stream = fs_driver_open_fstab( path , false ); + FILE * stream = fs_driver_open_fstab( mount_point , false ); if (stream != NULL) { exists = true; fclose( stream ); @@ -602,15 +633,14 @@ static void enkf_fs_free_driver(fs_driver_type * driver) { } -void enkf_fs_umount( enkf_fs_type * fs ) { +static void enkf_fs_umount( enkf_fs_type * fs ) { if (!fs->read_only) { enkf_fs_fsync( fs ); enkf_fs_fwrite_misfit( fs ); } - - { - int refcount = enkf_fs_decref( fs ); + { + int refcount = fs->refcount; if (refcount == 0) { enkf_fs_free_driver( fs->dynamic_forecast ); enkf_fs_free_driver( fs->dynamic_analyzed ); @@ -618,8 +648,14 @@ void enkf_fs_umount( enkf_fs_type * fs ) { enkf_fs_free_driver( fs->eclipse_static ); enkf_fs_free_driver( fs->index ); + if (fs->lock_fd > 0) { + close( fs->lock_fd ); // Closing the lock_file file descriptor - and releasing the lock. + util_unlink_existing( fs->lock_file ); + } + util_safe_free( fs->case_name ); util_safe_free( fs->root_path ); + util_safe_free(fs->lock_file); util_safe_free( fs->mount_point ); path_fmt_free( fs->case_fmt ); path_fmt_free( fs->case_member_fmt ); @@ -629,8 +665,10 @@ void enkf_fs_umount( enkf_fs_type * fs ) { state_map_free( fs->state_map ); time_map_free( fs->time_map ); cases_config_free( fs->cases_config ); + misfit_ensemble_free( fs->misfit_ensemble ); free( fs ); - } + } else + util_abort("%s: internal fuckup - tried to umount a filesystem with refcount:%d\n",__func__ , refcount); } } @@ -828,8 +866,8 @@ bool enkf_fs_is_read_only(const enkf_fs_type * fs) { return fs->read_only; } -void enkf_fs_set_writable(enkf_fs_type * fs) { - fs->read_only = false; +void enkf_fs_set_writable(enkf_fs_type * fs, bool writable) { + fs->read_only = !writable; } void enkf_fs_debug_fprintf( const enkf_fs_type * fs) { diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main.c index 475180acb0..170288619f 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_main.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main.c @@ -44,7 +44,6 @@ #include #include #include -#include #include #include #include @@ -105,6 +104,7 @@ #include #include #include +#include /**/ @@ -141,7 +141,6 @@ struct enkf_main_struct { UTIL_TYPE_ID_DECLARATION; - char * current_fs_case; enkf_fs_type * dbase; /* The internalized information. */ ensemble_config_type * ensemble_config; /* The config objects for the various enkf nodes.*/ qc_module_type * qc_module; @@ -151,7 +150,6 @@ struct enkf_main_struct { analysis_config_type * analysis_config; local_config_type * local_config; /* Holding all the information about local analysis. */ ert_templates_type * templates; /* Run time templates */ - log_type * logh; /* Handle to an open log file. */ plot_config_type * plot_config; /* Information about plotting. */ rng_config_type * rng_config; rng_type * rng; @@ -207,6 +205,21 @@ void enkf_main_set_pre_clear_runpath( enkf_main_type * enkf_main , bool pre_clea } +bool enkf_main_set_refcase( enkf_main_type * enkf_main , const char * refcase_path) { + bool set_refcase = ecl_config_load_refcase( enkf_main->ecl_config , refcase_path ); + + model_config_set_refcase( enkf_main->model_config , ecl_config_get_refcase( enkf_main->ecl_config )); + ensemble_config_set_refcase( enkf_main->ensemble_config , ecl_config_get_refcase( enkf_main->ecl_config )); + + return set_refcase; +} + + +ui_return_type * enkf_main_validata_refcase( const enkf_main_type * enkf_main , const char * refcase_path) { + return ecl_config_validate_refcase( enkf_main->ecl_config , refcase_path ); +} + + ui_return_type * enkf_main_set_eclbase( enkf_main_type * enkf_main , const char * eclbase_fmt) { ui_return_type * ui_return = ecl_config_validate_eclbase( enkf_main->ecl_config , eclbase_fmt); if (ui_return_get_status(ui_return) == UI_RETURN_OK) { @@ -228,22 +241,6 @@ void enkf_main_set_jobname( enkf_main_type * enkf_main , const char * jobname_fm enkf_main_init_jobname( enkf_main ); } - -ui_return_type * enkf_main_validata_refcase( const enkf_main_type * enkf_main , const char * refcase_path) { - return ecl_config_validate_refcase( enkf_main->ecl_config , refcase_path ); -} - - -bool enkf_main_set_refcase( enkf_main_type * enkf_main , const char * refcase_path) { - bool set_refcase = ecl_config_load_refcase( enkf_main->ecl_config , refcase_path ); - - model_config_set_refcase( enkf_main->model_config , ecl_config_get_refcase( enkf_main->ecl_config )); - ensemble_config_set_refcase( enkf_main->ensemble_config , ecl_config_get_refcase( enkf_main->ecl_config )); - - return set_refcase; -} - - void enkf_main_set_user_config_file( enkf_main_type * enkf_main , const char * user_config_file ) { enkf_main->user_config_file = util_realloc_string_copy( enkf_main->user_config_file , user_config_file ); } @@ -290,10 +287,6 @@ model_config_type * enkf_main_get_model_config( const enkf_main_type * enkf_main return enkf_main->model_config; } -log_type * enkf_main_get_logh( const enkf_main_type * enkf_main ) { - return enkf_main->logh; -} - plot_config_type * enkf_main_get_plot_config( const enkf_main_type * enkf_main ) { return enkf_main->plot_config; } @@ -344,6 +337,7 @@ qc_module_type * enkf_main_get_qc_module( const enkf_main_type * enkf_main ) { void enkf_main_reload_obs( enkf_main_type * enkf_main) { enkf_obs_reload(enkf_main->obs , model_config_get_history(enkf_main->model_config), + model_config_get_external_time_map(enkf_main->model_config), ecl_config_get_grid( enkf_main->ecl_config ), ecl_config_get_refcase( enkf_main->ecl_config ) , analysis_config_get_std_cutoff(enkf_main->analysis_config), @@ -362,6 +356,7 @@ void enkf_main_load_obs( enkf_main_type * enkf_main , const char * obs_config_fi if (!util_string_equal( obs_config_file , enkf_obs_get_config_file( enkf_main->obs ))) { enkf_obs_load(enkf_main->obs , model_config_get_history(enkf_main->model_config), + model_config_get_external_time_map(enkf_main->model_config), obs_config_file , ecl_config_get_grid( enkf_main->ecl_config ), ecl_config_get_refcase( enkf_main->ecl_config ) , @@ -400,9 +395,6 @@ ui_return_type * enkf_main_set_data_file( enkf_main_type * enkf_main , const cha - - - static void enkf_main_free_ensemble( enkf_main_type * enkf_main ) { if (enkf_main->ensemble != NULL) { const int ens_size = enkf_main->ens_size; @@ -424,13 +416,9 @@ void enkf_main_free(enkf_main_type * enkf_main){ ranking_table_free( enkf_main->ranking_table ); enkf_main_free_ensemble( enkf_main ); if (enkf_main->dbase != NULL) - enkf_fs_umount( enkf_main->dbase ); + enkf_fs_decref( enkf_main->dbase ); - util_safe_free( enkf_main->current_fs_case ); - - if (log_is_open( enkf_main->logh )) - log_add_message( enkf_main->logh , false , NULL , "Exiting ert application normally - all is fine(?)" , false); - log_close( enkf_main->logh ); + ert_log_close(); analysis_config_free(enkf_main->analysis_config); ecl_config_free(enkf_main->ecl_config); @@ -1023,9 +1011,10 @@ void enkf_main_get_PC( const matrix_type * S, double truncation , int ncomp , matrix_type * PC , - matrix_type * PC_obs) { - - enkf_linalg_get_PC( S , dObs , truncation , ncomp , PC , PC_obs); + matrix_type * PC_obs , + double_vector_type * singular_values) { + + enkf_linalg_get_PC( S , dObs , truncation , ncomp , PC , PC_obs , singular_values); } @@ -1035,7 +1024,9 @@ void enkf_main_init_PC( const enkf_main_type * enkf_main , const local_obsdata_type * obsdata , double truncation_or_ncomp , matrix_type * PC , - matrix_type * PC_obs ) { + matrix_type * PC_obs , + double_vector_type * singular_values) { + state_enum state = FORECAST; enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); state_map_type * state_map = enkf_fs_get_state_map( fs ); @@ -1055,7 +1046,6 @@ void enkf_main_init_PC( const enkf_main_type * enkf_main , obsdata , state , ens_active_list , - enkf_main_get_ensemble_const( enkf_main ), meas_data , obs_data ); @@ -1081,7 +1071,7 @@ void enkf_main_init_PC( const enkf_main_type * enkf_main , ncomp = (int) truncation_or_ncomp; obs_data_scale( obs_data , S , NULL , NULL , NULL , dObs ); - enkf_linalg_get_PC( S , dObs , truncation , ncomp , PC , PC_obs); + enkf_linalg_get_PC( S , dObs , truncation , ncomp , PC , PC_obs , singular_values); matrix_free( S ); matrix_free( dObs ); @@ -1103,11 +1093,12 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ { matrix_type * PC = matrix_alloc(1,1); matrix_type * PC_obs = matrix_alloc(1,1); + double_vector_type * singular_values = double_vector_alloc(0,0); - enkf_main_init_PC( enkf_main , obs_data , truncation_or_ncomp , PC , PC_obs ); - pca_plot_data = pca_plot_data_alloc( local_obsdata_get_name( obs_data ) , PC , PC_obs ); - - + enkf_main_init_PC( enkf_main , obs_data , truncation_or_ncomp , PC , PC_obs , singular_values ); + pca_plot_data = pca_plot_data_alloc( local_obsdata_get_name( obs_data ) , PC , PC_obs , singular_values); + + double_vector_free( singular_values ); matrix_free( PC ); matrix_free( PC_obs ); } @@ -1120,6 +1111,10 @@ static void assert_matrix_size(const matrix_type * m , const char * name , int r util_abort("%s: matrix mismatch %s:[%d,%d] - expected:[%d, %d]", __func__ , name , matrix_get_rows(m) , matrix_get_columns(m) , rows , columns); } +static void assert_size_equal(int ens_size , const bool_vector_type * ens_mask) { + if (bool_vector_size( ens_mask ) != ens_size) + util_abort("%s: fundamental inconsisentcy detected. Total ens_size:%d mask_size:%d \n",__func__ , ens_size , bool_vector_size( ens_mask )); +} static void enkf_main_analysis_update( enkf_main_type * enkf_main , @@ -1154,6 +1149,8 @@ static void enkf_main_analysis_update( enkf_main_type * enkf_main , assert_matrix_size(X , "X" , ens_size , ens_size); assert_matrix_size(S , "S" , active_size , ens_size); assert_matrix_size(R , "R" , active_size , active_size); + assert_size_equal( enkf_main_get_ensemble_size( enkf_main ) , ens_mask ); + if (analysis_module_check_option( module , ANALYSIS_NEED_ED)) { E = obs_data_allocE( obs_data , enkf_main->rng , ens_size , active_size ); D = obs_data_allocD( obs_data , E , S ); @@ -1170,7 +1167,7 @@ static void enkf_main_analysis_update( enkf_main_type * enkf_main , /*****************************************************************/ - analysis_module_init_update( module , S , R , dObs , E , D ); + analysis_module_init_update( module , ens_mask , S , R , dObs , E , D ); { hash_iter_type * dataset_iter = local_ministep_alloc_dataset_iter( ministep ); enkf_fs_type * src_fs = enkf_main_get_fs( enkf_main ); @@ -1190,10 +1187,11 @@ static void enkf_main_analysis_update( enkf_main_type * enkf_main , int ncomp = ens_size - 1; matrix_type * PC = matrix_alloc(1,1); matrix_type * PC_obs = matrix_alloc(1,1); + double_vector_type * singular_values = double_vector_alloc(0,0); local_obsset_type * obsset = local_ministep_get_obsset( ministep ); const char * obsset_name = local_obsset_get_name( obsset ); - enkf_main_get_PC( S , dObs , truncation , ncomp , PC , PC_obs ); + enkf_main_get_PC( S , dObs , truncation , ncomp , PC , PC_obs , singular_values); { char * filename = util_alloc_sprintf(analysis_config_get_PC_filename( enkf_main->analysis_config ) , step1 , step2 , obsset_name); char * full_path = util_alloc_filename( analysis_config_get_PC_path( enkf_main->analysis_config) , filename , NULL ); @@ -1205,6 +1203,7 @@ static void enkf_main_analysis_update( enkf_main_type * enkf_main , } matrix_free( PC ); matrix_free( PC_obs ); + double_vector_free( singular_values ); } if (localA == NULL) @@ -1268,7 +1267,7 @@ static void enkf_main_analysis_update( enkf_main_type * enkf_main , **/ -static bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type * step_list, enkf_fs_type * target_fs , int target_step , run_mode_type run_mode) { +bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type * step_list, enkf_fs_type * target_fs , int target_step , run_mode_type run_mode) { /* If merge_observations is true all observations in the time interval [step1+1,step2] will be used, otherwise only the last @@ -1340,7 +1339,6 @@ static bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type step_list , FORECAST, ens_active_list , - (const enkf_state_type **) enkf_main->ensemble, meas_forecast, obs_data , obsset ); @@ -1364,6 +1362,14 @@ static bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type ministep , meas_forecast , obs_data ); + else if (target_fs != source_fs) { + ert_log_add_fmt_message( 1 , stderr , "No active observations. Parameters copied directly: %s -> %s" , enkf_fs_get_case_name( enkf_main_get_fs( enkf_main )) , enkf_fs_get_case_name( target_fs)); + enkf_main_init_case_from_existing( enkf_main , + enkf_main_get_fs( enkf_main ) , + 0 , + ANALYZED , + target_fs ); + } } fclose( log_stream ); @@ -1377,8 +1383,8 @@ static bool enkf_main_UPDATE(enkf_main_type * enkf_main , const int_vector_type if (target_state_map != source_state_map) { state_map_set_from_inverted_mask( target_state_map , ens_mask , STATE_PARENT_FAILURE); state_map_set_from_mask( target_state_map , ens_mask , STATE_INITIALIZED ); - enkf_fs_fsync( target_fs ); - } + enkf_fs_fsync( target_fs ); + } } bool_vector_free( ens_mask ); int_vector_free( ens_active_list ); @@ -1405,10 +1411,17 @@ static bool enkf_main_smoother_update__(enkf_main_type * enkf_main , const int_v bool enkf_main_smoother_update(enkf_main_type * enkf_main , enkf_fs_type * target_fs) { int stride = 1; + int step2; time_map_type * time_map = enkf_fs_get_time_map( enkf_main_get_fs( enkf_main )); - int_vector_type * step_list = enkf_main_update_alloc_step_list( enkf_main , 0 , time_map_get_last_step( time_map ) , stride); - bool update_done = enkf_main_smoother_update__( enkf_main , step_list , target_fs ); - + int_vector_type * step_list; + bool update_done; + + step2 = time_map_get_last_step( time_map ); + if (step2 < 0) + step2 = model_config_get_last_history_restart( enkf_main->model_config ); + + step_list = enkf_main_update_alloc_step_list( enkf_main , 0 , step2 , stride); + update_done = enkf_main_smoother_update__( enkf_main , step_list , target_fs ); int_vector_free( step_list ); return update_done; @@ -1424,12 +1437,12 @@ static void enkf_main_report_run_failure( const enkf_main_type * enkf_main , int const char * stderr_file = job_queue_iget_stderr_file( job_queue , queue_index ); if (stderr_file == NULL) - log_add_fmt_message( enkf_main->logh , 1 , stderr , "** ERROR ** path:%s job:%s reason:%s" , + ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s job:%s reason:%s" , job_queue_iget_run_path( job_queue , queue_index), job_queue_iget_failed_job( job_queue , queue_index), job_queue_iget_error_reason( job_queue , queue_index )); else - log_add_fmt_message( enkf_main->logh , 1 , stderr , "** ERROR ** path:%s job:%s reason:%s Check file:%s" , + ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s job:%s reason:%s Check file:%s" , job_queue_iget_run_path( job_queue , queue_index), job_queue_iget_failed_job( job_queue , queue_index), job_queue_iget_error_reason( job_queue , queue_index ), @@ -1443,7 +1456,7 @@ static void enkf_main_report_load_failure( const enkf_main_type * enkf_main , in const enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); int queue_index = enkf_state_get_queue_index( enkf_state ); - log_add_fmt_message( enkf_main->logh , 1 , stderr , "** ERROR ** path:%s - Could not load all required data", + ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s - Could not load all required data", job_queue_iget_run_path( job_queue , queue_index)); } @@ -1492,6 +1505,7 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , int init_step_parameter , state_enum init_state_parameter , state_enum init_state_dynamic , + int iter , int step1 , int step2) { @@ -1516,11 +1530,11 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , printf("Starting forward step: %d -> %d\n",step1 , step2); } - log_add_message(enkf_main->logh , 1 , NULL , "===================================================================", false); + ert_log_add_fmt_message( 1 , NULL , "===================================================================", false); if (run_mode == ENKF_ASSIMILATION) - log_add_fmt_message(enkf_main->logh , 1 , NULL , "Forward model: %d -> %d ",step1,step2); + ert_log_add_fmt_message( 1 , NULL , "Forward model: %d -> %d ",step1,step2); else - log_add_fmt_message(enkf_main->logh , 1 , NULL , "Forward model: %d -> ??? ",step1); + ert_log_add_fmt_message( 1 , NULL , "Forward model: %d -> ??? ",step1); job_size = bool_vector_count_equal( iactive , true ); { @@ -1530,12 +1544,15 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , /* Start the queue */ if (run_mode != INIT_ONLY) { - arg_pack_type * queue_args = arg_pack_alloc(); /* This arg_pack will be freed() in the job_que_run_jobs__() */ - arg_pack_append_ptr(queue_args , job_queue); - arg_pack_append_int(queue_args , job_size); - arg_pack_append_bool(queue_args , verbose_queue); - job_queue_reset(job_queue); - pthread_create( &queue_thread , NULL , job_queue_run_jobs__ , queue_args); + if (site_config_has_job_script( enkf_main->site_config )) { + arg_pack_type * queue_args = arg_pack_alloc(); /* This arg_pack will be freed() in the job_que_run_jobs__() */ + arg_pack_append_ptr(queue_args , job_queue); + arg_pack_append_int(queue_args , job_size); + arg_pack_append_bool(queue_args , verbose_queue); + job_queue_reset(job_queue); + pthread_create( &queue_thread , NULL , job_queue_run_jobs__ , queue_args); + } else + util_exit("No job script specified, can not start any jobs. Use the key JOB_SCRIPT in the config file\n"); } @@ -1544,7 +1561,7 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); runpath_list_type * runpath_list = qc_module_get_runpath_list( enkf_main->qc_module ); runpath_list_clear( runpath_list ); - + for (iens = 0; iens < active_ens_size; iens++) { enkf_state_type * enkf_state = enkf_main->ensemble[iens]; if (bool_vector_iget(iactive , iens)) { @@ -1560,11 +1577,13 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , init_state_parameter, init_state_dynamic , load_start , + iter , step1 , step2 ); runpath_list_add( runpath_list , iens , + iter , enkf_state_get_run_path( enkf_state ) , enkf_state_get_eclbase( enkf_state )); { @@ -1589,7 +1608,7 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , } if (run_mode != INIT_ONLY) { job_queue_submit_complete( job_queue ); - log_add_message(enkf_main->logh , 1 , NULL , "All jobs submitted to internal queue - waiting for completion" , false); + ert_log_add_message( 1 , NULL , "All jobs submitted to internal queue - waiting for completion" , false); int max_runtime = analysis_config_get_max_runtime(enkf_main_get_analysis_config( enkf_main )); job_queue_set_max_job_duration(job_queue, max_runtime); @@ -1614,9 +1633,11 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , switch (run_status) { case JOB_RUN_FAILURE: enkf_main_report_run_failure( enkf_main , iens ); + bool_vector_iset(iactive, iens, false); break; case JOB_LOAD_FAILURE: enkf_main_report_load_failure( enkf_main , iens ); + bool_vector_iset(iactive, iens, false); break; case JOB_RUN_OK: break; @@ -1628,7 +1649,7 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , } enkf_fs_fsync( enkf_main->dbase ); if (totalOK) - log_add_fmt_message(enkf_main->logh , 1 , NULL , "All jobs complete and data loaded."); + ert_log_add_fmt_message( 1 , NULL , "All jobs complete and data loaded."); return totalOK; } else @@ -1641,6 +1662,9 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , */ int_vector_type * enkf_main_update_alloc_step_list( const enkf_main_type * enkf_main , int load_start , int step2 , int stride) { int_vector_type * step_list = int_vector_alloc( 0 , 0 ); + + if (step2 < load_start) + util_abort("%s: fatal internal error: Tried to make step list %d ... %d \n",__func__ , load_start , step2); if (stride == 0) int_vector_append( step_list , step2 ); @@ -1693,10 +1717,9 @@ void enkf_main_init_run( enkf_main_type * enkf_main, const bool_vector_type * ia enkf_main_init_internalization(enkf_main , run_mode); - if (iactive) { - const int active_ens_size = util_int_min( bool_vector_size( iactive ) , enkf_main_get_ensemble_size( enkf_main )); + { stringlist_type * param_list = ensemble_config_alloc_keylist_from_var_type( enkf_main->ensemble_config , PARAMETER ); - enkf_main_initialize_from_scratch( enkf_main , param_list , 0 , active_ens_size - 1 , init_mode ); + enkf_main_initialize_from_scratch_with_bool_vector(enkf_main , param_list , iactive , init_mode ); stringlist_free( param_list ); } } @@ -1719,7 +1742,7 @@ void enkf_main_run_exp(enkf_main_type * enkf_main , int load_start = start_report; state_enum init_state_parameter = start_state; state_enum init_state_dynamic = start_state; - if (enkf_main_run_step(enkf_main , run_mode , iactive , load_start , init_step_parameters , init_state_parameter , init_state_dynamic , start_report , -1)) + if (enkf_main_run_step(enkf_main , run_mode , iactive , load_start , init_step_parameters , init_state_parameter , init_state_dynamic , 0, start_report , -1)) enkf_main_run_post_workflow(enkf_main); } } @@ -1794,7 +1817,7 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , load_start++; enkf_main_run_step(enkf_main , ENKF_ASSIMILATION , iactive , load_start , init_step_parameter , - init_state_parameter , init_state_dynamic , report_step1 , report_step2); + init_state_parameter , init_state_dynamic , 0, report_step1 , report_step2); { enkf_fs_type * fs = enkf_main_get_fs(enkf_main); state_map_type * state_map = enkf_fs_get_state_map(fs); @@ -1833,326 +1856,146 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , } -bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode) { +bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode, int iter) { enkf_main_init_run( enkf_main , iactive , ENSEMBLE_EXPERIMENT , init_mode); - return enkf_main_run_step( enkf_main , ENSEMBLE_EXPERIMENT , iactive , 0 , 0 , ANALYZED , UNDEFINED , 0 , 0 ); + return enkf_main_run_step( enkf_main , ENSEMBLE_EXPERIMENT , iactive , 0 , 0 , ANALYZED , UNDEFINED , iter, 0 , 0 ); } -void enkf_main_run_smoother(enkf_main_type * enkf_main , const char * target_fs_name , bool_vector_type * iactive , bool rerun) { +void enkf_main_run_smoother(enkf_main_type * enkf_main , const char * target_fs_name , bool_vector_type * iactive , int iter , bool rerun) { analysis_config_type * analysis_config = enkf_main_get_analysis_config( enkf_main ); if (!analysis_config_get_module_option( analysis_config , ANALYSIS_ITERABLE)) { - if (enkf_main_run_simple_step( enkf_main , iactive , INIT_CONDITIONAL)) + if (enkf_main_run_simple_step( enkf_main , iactive , INIT_CONDITIONAL, iter)) enkf_main_run_post_workflow(enkf_main); { - enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_fs_name , false , true ); + enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_fs_name , true ); bool update_done = enkf_main_smoother_update( enkf_main , target_fs ); - + if (rerun) { - /* - IFF a rerun path has been added with the RERUN_PATH config - key the model_config object will select that runpath as the - currently active one. If no path has been created with the - RERUN_PATH config option the model_config_select_runpath() - call will fail silently. - - The runpath select with this call will remain the currently - active runpath for the remaining part of this program - invocation. - */ if (update_done) { enkf_main_set_fs( enkf_main , target_fs , target_fs_name); - model_config_select_runpath( enkf_main_get_model_config( enkf_main ) , RERUN_PATH_KEY ); - if (enkf_main_run_simple_step(enkf_main , iactive , INIT_NONE )) + if (enkf_main_run_simple_step(enkf_main , iactive , INIT_NONE, iter + 1)) enkf_main_run_post_workflow(enkf_main); - } else { + } else fprintf(stderr,"** Warning: the analysis update failed - no rerun started.\n"); - enkf_fs_umount( target_fs ); - } } + enkf_fs_decref( target_fs ); + } } else fprintf(stderr,"** ERROR: The normal smoother should not be combined with an iterable analysis module\n"); } -bool enkf_main_iterate_smoother(enkf_main_type * enkf_main, int iteration_number, const char * target_fs_name , bool_vector_type * iactive) { +static bool enkf_main_run_simulation_and_postworkflow(enkf_main_type * enkf_main, int iteration_number, bool_vector_type * iactive) { + bool ret = true; const int step1 = 0; - const int step2 = enkf_main_get_history_length( enkf_main ); - bool updateOK = false; - int_vector_type * step_list = int_vector_alloc(0, 0); - - for (int step = step1; step <= step2; step++) - int_vector_append(step_list, step); + analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + const int min_realizations = analysis_config_get_min_realisations(analysis_config); + + printf("Running simulation iteration %d\n", iteration_number); + bool total_ok = enkf_main_run_step(enkf_main, ENSEMBLE_EXPERIMENT , iactive , step1 , step1 , FORECAST , FORECAST , iteration_number, step1 , -1); + + if (total_ok || (bool_vector_count_equal(iactive, true) >= min_realizations)) + enkf_main_run_post_workflow(enkf_main); + else { + fprintf(stderr,"Simulation in iteration %d failed, stopping Iterated Ensemble Smoother\n", iteration_number); + ret = false; + } + return ret; +} + + +static bool enkf_main_run_analysis(enkf_main_type * enkf_main, const char * target_fs_name, int iteration_number) { + bool updateOK = false; + analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + analysis_module_type * analysis_module = analysis_config_get_active_module(analysis_config); + int pre_iteration_number = analysis_module_get_int(analysis_module, "ITER"); if (target_fs_name == NULL){ fprintf(stderr,"Sorry: the updated ensemble will overwrite the current case in the iterated ensemble smoother."); - updateOK = enkf_main_smoother_update__(enkf_main , step_list , enkf_main_get_fs(enkf_main)); + printf("Running analysis on case %s, target case is %s\n", enkf_main_get_current_fs(enkf_main), enkf_main_get_current_fs(enkf_main)); + updateOK = enkf_main_smoother_update(enkf_main, enkf_main_get_fs(enkf_main)); } else { - enkf_fs_type * target_fs = enkf_main_mount_alt_fs(enkf_main , target_fs_name , false , true ); - updateOK = enkf_main_smoother_update__(enkf_main , step_list , target_fs ); - enkf_main_set_fs(enkf_main , target_fs , NULL); - cases_config_set_int(enkf_fs_get_cases_config(target_fs), "iteration_number", iteration_number+1); + enkf_fs_type * target_fs = enkf_main_mount_alt_fs(enkf_main , target_fs_name , true ); + printf("Running analysis on case %s, target case is %s\n", enkf_main_get_current_fs(enkf_main), enkf_fs_get_case_name(target_fs)); + updateOK = enkf_main_smoother_update(enkf_main, target_fs); + enkf_fs_decref( target_fs ); } + int post_iteration_number = analysis_module_get_int(analysis_module, "ITER"); + + if (post_iteration_number <= pre_iteration_number) + updateOK = false; + if (updateOK) { - /* - const char * runpath_fmt = analysis_iter_config_iget_runpath_fmt(iter_config, iteration_number); - if (runpath_fmt != NULL ) { - char * runpath_key = util_alloc_sprintf("runpath-%d", 999); - model_config_add_runpath(model_config, runpath_key, runpath_fmt); - model_config_select_runpath(model_config, runpath_key); - free(runpath_key); - } - */ - enkf_main_run_step( enkf_main , ENSEMBLE_EXPERIMENT , iactive , step1 , step1 , FORECAST , FORECAST , step1 , -1 ); + enkf_fs_type * target_fs = enkf_main_mount_alt_fs(enkf_main , target_fs_name , true ); + cases_config_set_int(enkf_fs_get_cases_config(target_fs), "iteration_number", iteration_number+1); + enkf_fs_decref( target_fs ); } - int_vector_free(step_list); + return updateOK; } - -void enkf_main_run_iterated_ES(enkf_main_type * enkf_main) { +void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations_to_run) { const analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); - + if (analysis_config_get_module_option( analysis_config , ANALYSIS_ITERABLE)) { - const int ens_size = enkf_main_get_ensemble_size(enkf_main); - model_config_type * model_config = enkf_main_get_model_config(enkf_main); + const int ens_size = enkf_main_get_ensemble_size(enkf_main); + bool_vector_type * iactive = bool_vector_alloc(ens_size , true); + enkf_fs_type * current_case = enkf_main_get_fs( enkf_main ); analysis_iter_config_type * iter_config = analysis_config_get_iter_config(analysis_config); - bool_vector_type * iactive = bool_vector_alloc(ens_size , true); - - - const int step1 = 0; - int iter = 0; - int num_iter = analysis_iter_config_get_num_iterations(iter_config); - - { - const char * runpath_fmt = analysis_iter_config_iget_runpath_fmt(iter_config, iter); - if (runpath_fmt != NULL ) - { - char * runpath_key = util_alloc_sprintf("runpath-%d", iter); - model_config_add_runpath(model_config, runpath_key, runpath_fmt); - model_config_select_runpath(model_config, runpath_key); - free(runpath_key); - } + int current_iteration = 0; + const char * initial_case_name = analysis_iter_config_iget_case( iter_config , current_iteration ); + + if (!util_string_equal( initial_case_name , enkf_fs_get_case_name( current_case ))) { + enkf_fs_type * initial_case = enkf_main_mount_alt_fs( enkf_main , initial_case_name , true); + enkf_main_init_case_from_existing(enkf_main, current_case, 0, ANALYZED, initial_case); + enkf_main_set_fs( enkf_main , initial_case , NULL ); + enkf_fs_decref( initial_case ); } - - enkf_main_init_run(enkf_main , iactive , ENSEMBLE_EXPERIMENT , INIT_CONDITIONAL); - if (enkf_main_run_step(enkf_main, ENSEMBLE_EXPERIMENT , iactive , step1 , step1 , FORECAST , FORECAST , step1 , -1)) - enkf_main_run_post_workflow(enkf_main); - - while (true) { - const char * target_fs_name = analysis_iter_config_iget_case( iter_config , iter ); - if (iter == num_iter) - break; - if (enkf_main_iterate_smoother(enkf_main, iter, target_fs_name , iactive)) - iter++; - else - break; + { //Iteration 0 + enkf_main_init_run(enkf_main , iactive , ENSEMBLE_EXPERIMENT , INIT_FORCE); + enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration, iactive); } - bool_vector_free(iactive); - } else - fprintf(stderr,"** ERROR: The current analysis module:%s can not be used for iterations \n", - analysis_config_get_active_module_name( analysis_config )); -} + { // Iteration 1 - num_iterations [iteration 1, num iterations] + int num_retries_per_iteration = analysis_iter_config_get_num_retries_per_iteration(iter_config); + int num_tries = 0; + current_iteration = 1; + while ((current_iteration <= num_iterations_to_run) && (num_tries < num_retries_per_iteration)) { + const char * target_fs_name = analysis_iter_config_iget_case( iter_config , current_iteration ); -void enkf_main_run_one_more_iteration(enkf_main_type * enkf_main, int step2) { - //model_config_type * model_config = enkf_main_get_model_config( enkf_main ); - //const analysis_config_type * analysis_config = enkf_main_get_analysis_config( enkf_main ); - //analysis_iter_config_type * iter_config = analysis_config_get_iter_config( analysis_config ); - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - cases_config_type * case_config = enkf_fs_get_cases_config( fs ); - int iteration_number = cases_config_get_iteration_number( case_config ); - //const int step1 = 0; - bool_vector_type * iactive = bool_vector_alloc(0 , true); - - enkf_main_iterate_smoother(enkf_main, iteration_number, "ONE-MORE" , iactive); -} - -/*****************************************************************/ -/* Filesystem copy functions */ - - -void enkf_main_copy_ensemble(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step , - state_enum source_state , - const char * target_case , - int target_report_step , - state_enum target_state , - const bool_vector_type * iens_mask, - const char * ranking_key , /* It is OK to supply NULL - but if != NULL it must exist */ - const stringlist_type * node_list) { - - /** - Must start by setting up the enkf_fs instance to read and write - from the correct cases. - */ - - const int ens_size = enkf_main_get_ensemble_size( enkf_main ); - - { - enkf_fs_type * source_fs = enkf_main_mount_alt_fs( enkf_main , source_case , true , false ); - enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_case , false , true ); + if (enkf_main_run_analysis(enkf_main, target_fs_name, current_iteration)) { + enkf_main_select_fs(enkf_main, target_fs_name); + if (!enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration, iactive)) + break; + num_tries = 0; + ++current_iteration; + } else { + fprintf(stderr, "\nAnalysis failed, rerunning simulation on changed initial parameters\n"); + enkf_fs_type * target_fs = enkf_main_mount_alt_fs( enkf_main , target_fs_name , false ); + enkf_main_init_current_case_from_existing(enkf_main, target_fs, 0, ANALYZED); + enkf_fs_decref(target_fs); + ++num_tries; - { - int * ranking_permutation; - int inode , src_iens; - - if (ranking_key != NULL) { - ranking_table_type * ranking_table = enkf_main_get_ranking_table( enkf_main ); - ranking_permutation = (int *) ranking_table_get_permutation( ranking_table , ranking_key ); - } else { - ranking_permutation = util_calloc( ens_size , sizeof * ranking_permutation ); - for (src_iens = 0; src_iens < ens_size; src_iens++) - ranking_permutation[src_iens] = src_iens; - } - - for (inode =0; inode < stringlist_get_size( node_list ); inode++) { - enkf_config_node_type * config_node = ensemble_config_get_node( enkf_main->ensemble_config , stringlist_iget( node_list , inode )); - for (src_iens = 0; src_iens < enkf_main_get_ensemble_size( enkf_main ); src_iens++) { - if (bool_vector_safe_iget(iens_mask , src_iens)) { - int target_iens = ranking_permutation[src_iens]; - node_id_type src_id = {.report_step = source_report_step , .iens = src_iens , .state = source_state }; - node_id_type target_id = {.report_step = target_report_step , .iens = target_iens , .state = target_state }; - - enkf_node_copy( config_node , - source_fs , target_fs , - src_id , target_id ); - - } + if (!enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration-1, iactive)) + break; } } - - if (ranking_permutation == NULL) - free( ranking_permutation ); } - enkf_fs_umount( source_fs ); - enkf_fs_umount( target_fs ); - } -} - - - - - -/** - This is based on a general copy function, but a couple of variables - have been set to default values because this is an initialization: - - target_step = 0 - target_state = analyzed - -*/ - -void enkf_main_initialize_from_existing__(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step, - state_enum source_state, - const bool_vector_type * iens_mask, - const char * ranking_key , /* It is OK to supply NULL - but if != NULL it must exist */ - const stringlist_type * node_list) { - - const int target_report_step = 0; - const state_enum target_state = ANALYZED; - const char * target_case = enkf_main->current_fs_case; - - enkf_main_copy_ensemble(enkf_main , - source_case , - source_report_step , - source_state , - target_case , - target_report_step , - target_state , - iens_mask , - ranking_key , - node_list); - -} - - - -/** - This function will select all the parameter variables in the - ensmeble, and then call enkf_main_initialize_from_existing__() with - that list. -*/ -void enkf_main_initialize_from_existing(enkf_main_type * enkf_main , - const char * source_case , - int source_report_step, - state_enum source_state, - const bool_vector_type * iens_mask, - const char * ranking_key) { - stringlist_type * param_list = ensemble_config_alloc_keylist_from_var_type( enkf_main->ensemble_config , PARAMETER ); /* Select only paramters - will fail for GEN_DATA of type DYNAMIC_STATE. */ - enkf_main_initialize_from_existing__(enkf_main , source_case , source_report_step , source_state , iens_mask , ranking_key , param_list ); - stringlist_free( param_list ); -} - - - -static void * enkf_main_initialize_from_scratch_mt(void * void_arg) { - arg_pack_type * arg_pack = arg_pack_safe_cast( void_arg ); - enkf_main_type * enkf_main = arg_pack_iget_ptr( arg_pack , 0); - const stringlist_type * param_list = arg_pack_iget_const_ptr( arg_pack , 1 ); - int iens1 = arg_pack_iget_int( arg_pack , 2 ); - int iens2 = arg_pack_iget_int( arg_pack , 3 ); - init_mode_enum init_mode = arg_pack_iget_int( arg_pack , 4 ); - int iens; - - for (iens = iens1; iens < iens2; iens++) { - enkf_state_type * state = enkf_main_iget_state( enkf_main , iens); - enkf_state_initialize( state , enkf_main_get_fs( enkf_main ) , param_list , init_mode); - } - - return NULL; -} - - -void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , const stringlist_type * param_list , int iens1 , int iens2, init_mode_enum init_mode) { - int num_cpu = 4; - thread_pool_type * tp = thread_pool_alloc( num_cpu , true ); - int ens_sub_size = (iens2 - iens1 + 1) / num_cpu; - arg_pack_type ** arg_list = util_calloc( num_cpu , sizeof * arg_list ); - int i; - - printf("Initializing .... "); fflush( stdout ); - for (i = 0; i < num_cpu; i++) { - arg_list[i] = arg_pack_alloc(); - arg_pack_append_ptr( arg_list[i] , enkf_main ); - arg_pack_append_const_ptr( arg_list[i] , param_list ); - { - int start_iens = i * ens_sub_size; - int end_iens = start_iens + ens_sub_size; - - if (i == (num_cpu - 1)){ - end_iens = iens2 + 1; /* Input is upper limit inclusive. */ - if(ens_sub_size == 0) - start_iens = iens1; /* Don't necessarily want to start from zero when ens_sub_size = 0*/ - } - arg_pack_append_int( arg_list[i] , start_iens ); - arg_pack_append_int( arg_list[i] , end_iens ); - } - arg_pack_append_int( arg_list[i] , init_mode ); - thread_pool_add_job( tp , enkf_main_initialize_from_scratch_mt , arg_list[i]); - } - thread_pool_join( tp ); - for (i = 0; i < num_cpu; i++) - arg_pack_free( arg_list[i] ); - free( arg_list ); - thread_pool_free( tp ); - printf("\n"); + bool_vector_free(iactive); + } else + fprintf(stderr,"** ERROR: The current analysis module:%s can not be used for iterations \n", analysis_config_get_active_module_name( analysis_config )); } - - /** This function creates a local_config file corresponding to the default 'ALL_ACTIVE' configuration. We eat our own dogshit around @@ -2279,8 +2122,7 @@ static void enkf_main_init_user_config( const enkf_main_type * enkf_main , confi config_schema_item_iset_type( item , 0 , CONFIG_EXISTING_PATH ); config_add_key_value(config , RUNPATH_KEY , false , CONFIG_STRING); - config_add_key_value(config , RERUN_PATH_KEY , false , CONFIG_STRING); - + item = config_add_schema_item(config , ENSPATH_KEY , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); @@ -2312,6 +2154,8 @@ static void enkf_main_init_user_config( const enkf_main_type * enkf_main , confi config_schema_item_set_argc_minmax(item , 1 , 1 ); config_schema_item_iset_type( item , 0 , CONFIG_EXISTING_PATH ); + config_add_key_value(config , TIME_MAP_KEY , false , CONFIG_EXISTING_PATH); + item = config_add_schema_item(config , RFT_CONFIG_KEY , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); config_schema_item_iset_type( item , 0 , CONFIG_EXISTING_PATH ); @@ -2319,6 +2163,9 @@ static void enkf_main_init_user_config( const enkf_main_type * enkf_main , confi item = config_add_schema_item(config , RFTPATH_KEY , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); + item = config_add_schema_item(config, GEN_KW_EXPORT_FILE_KEY, false ); + config_schema_item_set_argc_minmax(item , 1 , 1 ); + item = config_add_schema_item(config , LOCAL_CONFIG_KEY , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); config_schema_item_iset_type( item , 0 , CONFIG_EXISTING_PATH ); @@ -2327,11 +2174,11 @@ static void enkf_main_init_user_config( const enkf_main_type * enkf_main , confi config_schema_item_set_argc_minmax(item , 1 , 1 ); config_schema_item_iset_type( item , 0 , CONFIG_EXISTING_PATH ); - item = config_add_schema_item(config , HISTORY_SOURCE_KEY , false ); - config_schema_item_set_argc_minmax(item , 1 , 1); { stringlist_type * refcase_dep = stringlist_alloc_argv_ref( (const char *[1]) { REFCASE_KEY } , 1); - + + item = config_add_schema_item(config , HISTORY_SOURCE_KEY , false ); + config_schema_item_set_argc_minmax(item , 1 , 1); config_schema_item_set_common_selection_set(item , 3 , (const char *[3]) {"SCHEDULE" , "REFCASE_SIMULATED" , "REFCASE_HISTORY"}); config_schema_item_set_required_children_on_value(item , "REFCASE_SIMULATED" , refcase_dep); config_schema_item_set_required_children_on_value(item , "REFCASE_HISTORY" , refcase_dep); @@ -2481,7 +2328,7 @@ static void enkf_main_init_subst_list( enkf_main_type * enkf_main ) { enkf_main_type * enkf_main_alloc_empty( ) { enkf_main_type * enkf_main = util_malloc(sizeof * enkf_main); UTIL_TYPE_ID_INIT(enkf_main , ENKF_MAIN_ID); - enkf_main->current_fs_case = NULL; + ert_log_open_empty(); enkf_main->dbase = NULL; enkf_main->ensemble = NULL; enkf_main->user_config_file = NULL; @@ -2491,10 +2338,9 @@ enkf_main_type * enkf_main_alloc_empty( ) { enkf_main->rng = NULL; enkf_main->ens_size = 0; enkf_main->keep_runpath = int_vector_alloc( 0 , DEFAULT_KEEP ); - enkf_main->logh = log_open( NULL , DEFAULT_LOG_LEVEL ); enkf_main->rng_config = rng_config_alloc( ); enkf_main->site_config = site_config_alloc_empty(); - enkf_main->ensemble_config = ensemble_config_alloc_empty(); + enkf_main->ensemble_config = ensemble_config_alloc(); enkf_main->ecl_config = ecl_config_alloc(); enkf_main->plot_config = plot_config_alloc_default(); enkf_main->ranking_table = ranking_table_alloc( 0 ); @@ -2546,13 +2392,13 @@ static void enkf_main_install_data_kw( enkf_main_type * enkf_main , hash_type * const char * num_cpu_string = "1"; enkf_main_add_subst_kw( enkf_main , "CWD" , cwd , "The current working directory we are running from - the location of the config file." , true); - enkf_main_add_subst_kw( enkf_main , "CONFIG_PATH" , cwd , "The current working directory we are running from - the location of the config file." , false); + enkf_main_add_subst_kw( enkf_main , "CONFIG_PATH" , cwd , "The current working directory we are running from - the location of the config file." , true); enkf_main_add_subst_kw( enkf_main , "DATE" , date_string , "The current date." , true); enkf_main_add_subst_kw( enkf_main , "NUM_CPU" , num_cpu_string , "The number of CPU used for one forward model." , true ); enkf_main_add_subst_kw( enkf_main , "RUNPATH_FILE" , qc_module_get_runpath_list_file( enkf_main->qc_module ) , "The name of a file with a list of run directories." , true); - - //free( cwd ); - //free( date_string ); + + free( cwd ); + free( date_string ); } } @@ -2608,7 +2454,6 @@ void enkf_main_resize_ensemble( enkf_main_type * enkf_main , int new_ens_size ) enkf_main->ensemble_config , enkf_main->site_config , enkf_main->ecl_config , - enkf_main->logh , enkf_main->templates , enkf_main->subst_list); enkf_main->ens_size = new_ens_size; @@ -2629,20 +2474,19 @@ void enkf_main_update_node( enkf_main_type * enkf_main , const char * key ) { } -// NOTE KF 20130628: This is commented out, because I don't think it is used, but we'll give it some time -// -///** -// When the case has changed it is essential to invalidate the meta -// information in the enkf_nodes, otherwise the nodes might reuse old -// data (from a previous case). -//*/ -// -//static void enkf_main_invalidate_cache( enkf_main_type * enkf_main ) { -// int ens_size = enkf_main_get_ensemble_size( enkf_main ); -// int iens; -// for (iens = 0; iens < ens_size; iens++) -// enkf_state_invalidate_cache( enkf_main->ensemble[iens] ); -//} + +/* + When the case has changed it is essential to invalidate the meta + information in the enkf_nodes, otherwise the nodes might reuse old + data (from a previous case). +*/ + +static void enkf_main_invalidate_cache( enkf_main_type * enkf_main ) { + int ens_size = enkf_main_get_ensemble_size( enkf_main ); + int iens; + for (iens = 0; iens < ens_size; iens++) + enkf_state_invalidate_cache( enkf_main->ensemble[iens] ); +} /* @@ -2654,78 +2498,18 @@ void enkf_main_create_fs( enkf_main_type * enkf_main , const char * fs_path) { } */ -static void update_case_log(enkf_main_type * enkf_main , const char * case_path) { - /* : Update a small text file with the name of the host currently - running ert, the pid number of the process, the active case - and when it started. - - If the previous shutdown was unclean the file will be around, - and we will need the info from the previous invocation which - is in the file. For that reason we open with mode 'a' instead - of 'w'. - */ - - const char * ens_path = model_config_get_enspath( enkf_main->model_config); - - { - int buffer_size = 256; - char * current_host = util_alloc_filename( ens_path , CASE_LOG , NULL ); - FILE * stream = util_fopen( current_host , "a"); - - fprintf(stream , "CASE:%-16s " , case_path ); - fprintf(stream , "PID:%-8d " , getpid()); - { - char hostname[buffer_size]; - gethostname( hostname , buffer_size ); - fprintf(stream , "HOST:%-16s " , hostname ); - } - - - { - int year,month,day,hour,minute,second; - time_t now = time( NULL ); - - util_set_datetime_values( now , &second , &minute , &hour , &day , &month , &year ); - - fprintf(stream , "TIME:%02d/%02d/%4d-%02d.%02d.%02d\n" , day , month , year , hour , minute , second); - } - fclose( stream ); - free( current_host ); - } -} - - - - -static void enkf_main_close_fs( enkf_main_type * enkf_main ) { - enkf_fs_umount( enkf_main->dbase ); - enkf_main->dbase = NULL; -} - -enkf_fs_type * enkf_main_get_fs(const enkf_main_type * enkf_main) { - return enkf_fs_get_weakref( enkf_main->dbase ); -} -char * enkf_main_alloc_mount_point( const enkf_main_type * enkf_main , const char * case_path) { - char * mount_point; - if (util_is_abs_path( case_path )) - mount_point = util_alloc_string_copy( case_path ); - else - mount_point = util_alloc_filename( model_config_get_enspath( enkf_main->model_config) , case_path , NULL); - return mount_point; -} - void enkf_main_gen_data_special( enkf_main_type * enkf_main ) { stringlist_type * gen_data_keys = ensemble_config_alloc_keylist_from_impl_type( enkf_main->ensemble_config , GEN_DATA); for (int i=0; i < stringlist_get_size( gen_data_keys ); i++) { enkf_config_node_type * config_node = ensemble_config_get_node( enkf_main->ensemble_config , stringlist_iget( gen_data_keys , i)); - enkf_var_type var_type = enkf_config_node_get_var_type(config_node); - if ((var_type == DYNAMIC_STATE) || (var_type == DYNAMIC_RESULT)) { - gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); - gen_data_config_set_dynamic( gen_data_config , enkf_main->dbase ); + gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); + + if (gen_data_config_is_dynamic( gen_data_config )) { + gen_data_config_set_write_fs( gen_data_config, enkf_main->dbase); gen_data_config_set_ens_size( gen_data_config , enkf_main->ens_size ); } } @@ -2733,264 +2517,6 @@ void enkf_main_gen_data_special( enkf_main_type * enkf_main ) { } -static void enkf_main_write_current_case_file( const enkf_main_type * enkf_main, const char * case_path) { - const char * ens_path = model_config_get_enspath( enkf_main->model_config); - const char * base = CURRENT_CASE_FILE; - char * current_case_file = util_alloc_filename(ens_path , base, NULL); - FILE * stream = util_fopen( current_case_file , "w"); - fprintf(stream , case_path ); - util_fclose(stream); - free(current_case_file); -} - -static void enkf_main_update_current_case( enkf_main_type * enkf_main , const char * case_path) { - enkf_main_write_current_case_file(enkf_main, case_path); - update_case_log(enkf_main , case_path); - - enkf_main->current_fs_case = util_realloc_string_copy( enkf_main->current_fs_case , case_path); - enkf_main_gen_data_special( enkf_main ); - enkf_main_add_subst_kw( enkf_main , "ERT-CASE" , enkf_main->current_fs_case , "Current case" , true ); - enkf_main_add_subst_kw( enkf_main , "ERTCASE" , enkf_main->current_fs_case , "Current case" , true ); -} - - -static bool enkf_main_current_case_file_exists( const enkf_main_type * enkf_main) { - const char * ens_path = model_config_get_enspath( enkf_main->model_config); - char * current_case_file = util_alloc_filename(ens_path, CURRENT_CASE_FILE, NULL); - bool exists = util_file_exists(current_case_file); - free(current_case_file); - return exists; -} - -char* enkf_main_read_alloc_current_case_name(const enkf_main_type * enkf_main) { - char * current_case = NULL; - const char * ens_path = model_config_get_enspath( enkf_main->model_config); - char * current_case_file = util_alloc_filename(ens_path, CURRENT_CASE_FILE, NULL); - if (enkf_main_current_case_file_exists(enkf_main)) { - FILE * stream = util_fopen( current_case_file , "r"); - current_case = util_fscanf_alloc_token(stream); - util_fclose(stream); - } else { - util_abort("%s: File: storage/current_case not found, aborting! \n",__func__); - } - free(current_case_file); - return current_case; -} - - - -/** - The enkf_fs instances employ a simple reference counting - scheme. The main point with this system is to avoid opening the - full timesystem more than necessary (this is quite compute - intensive). This is essentially achieved by: - - 1. Create new fs instances by using the function - enkf_main_mount_alt_fs() - depending on the input arguments - this will either create a new enkf_fs instance or it will - just return a pointer to currently open fs instance; with an - increased refcount. - - 2. When you are finished with working with filesystem pointer - call enkf_fs_unmount() - this will reduce the refcount with - one, and eventually discard the complete datastructure when - the refcount has reached zero. - - 3. By using the function enkf_main_get_fs() / - enkf_fs_get_weakref() you get a pointer to the current fs - instance WITHOUT INCREASING THE REFCOUNT. This means that - scope calling one of these functions does not get any - ownership to the enkf_fs instance. - - The enkf_main instance will take ownership of the enkf_fs instance; - this implies that the calling scope must have proper ownership of - the fs instance which is passed in. The return value from - enkf_main_get_fs() can NOT be used as input to this function; this - is not checked for in any way - but the crash will be horrible if - this is not adhered to. -*/ - - -void enkf_main_set_fs( enkf_main_type * enkf_main , enkf_fs_type * fs , const char * case_path /* Can be NULL */) { - if (!case_path) - case_path = enkf_fs_get_case_name( fs ); - - if (enkf_main->dbase != NULL) - enkf_main_close_fs( enkf_main ); - - enkf_main->dbase = fs; - enkf_main_update_current_case(enkf_main, case_path); - } - - - -stringlist_type * enkf_main_alloc_caselist( const enkf_main_type * enkf_main ) { - stringlist_type * case_list = stringlist_alloc_new( ); - { - const char * ens_path = model_config_get_enspath( enkf_main->model_config ); - DIR * ens_dir = opendir( ens_path ); - if (ens_dir != NULL) { - int ens_fd = dirfd( ens_dir ); - if (ens_fd != -1) { - struct dirent * dp; - do { - dp = readdir( ens_dir ); - if (dp != NULL) { - if (!(util_string_equal( dp->d_name , ".") || util_string_equal(dp->d_name , ".."))) { - if (!util_string_equal( dp->d_name , CURRENT_CASE_FILE)) { - char * full_path = util_alloc_filename( ens_path , dp->d_name , NULL); - if (util_is_directory( full_path )) - stringlist_append_copy( case_list , dp->d_name ); - free( full_path); - } - } - } - } while (dp != NULL); - } - } - closedir( ens_dir ); - } - return case_list; -} - -void enkf_main_create_fs( const enkf_main_type * enkf_main , const char * case_path ) { - char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); - - enkf_fs_create_fs( new_mount_point, - model_config_get_dbase_type( enkf_main->model_config ) , - model_config_get_dbase_args( enkf_main->model_config )); - - free( new_mount_point ); -} - - -bool enkf_main_case_is_current(const enkf_main_type * enkf_main , const char * case_path) { - char * mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); - const char * current_mount_point = NULL; - bool is_current; - - if (enkf_main->dbase != NULL) - current_mount_point = enkf_fs_get_mount_point( enkf_main->dbase ); - - is_current = util_string_equal( mount_point , current_mount_point ); - free( mount_point ); - return is_current; -} - - -/* - All the return values from this function must be closed with - enkf_fs_umount(). If the return value is just a reference to the - current existing case the function will increase the reference count - on that enkf_fs instance, and the corresponding enkf_usmount will - decrease it again. -*/ - -enkf_fs_type * enkf_main_mount_alt_fs(const enkf_main_type * enkf_main , const char * case_path , bool read_only , bool create) { - if (enkf_main_case_is_current( enkf_main , case_path )) { - // Fast path - we just return a reference to the currently selected case; - // with increased refcount. - if(!read_only) { - enkf_fs_type * fs = enkf_main->dbase; - enkf_fs_set_writable(fs); - } - return enkf_fs_get_ref( enkf_main->dbase ); - } else { - // We have asked for an alterantive fs - must mount and possibly create that first. - enkf_fs_type * new_fs = NULL; - if (case_path != NULL) { - char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); - - if (!enkf_fs_exists( new_mount_point )) { - if (create) - enkf_main_create_fs( enkf_main , case_path ); - } - - new_fs = enkf_fs_mount( new_mount_point , read_only ); - free( new_mount_point ); - } - return new_fs; - } -} - - -state_map_type * enkf_main_alloc_readonly_state_map( const enkf_main_type * enkf_main , const char * case_path) { - char * mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); - state_map_type * state_map = enkf_fs_alloc_readonly_state_map( mount_point ); - free( mount_point ); - return state_map; -} - - - -void enkf_main_select_fs( enkf_main_type * enkf_main , const char * case_path ) { - if (enkf_main_case_is_current( enkf_main , case_path )) - return; /* We have tried to select the currently selected case - just return. */ - else { - - enkf_fs_type * new_fs = enkf_main_mount_alt_fs( enkf_main , case_path , false , true ); - if (enkf_main->dbase == new_fs) - util_abort("%s : return reference to current FS in situation where that should not happen.\n",__func__); - - if (new_fs != NULL) - enkf_main_set_fs( enkf_main , new_fs , case_path); - else { - const char * ens_path = model_config_get_enspath( enkf_main->model_config ); - util_exit("%s: select filesystem %s:%s failed \n",__func__ , ens_path , case_path ); - } - - } -} - - -/* - Return a weak reference - i.e. the refocunt is not increased. -*/ -const char * enkf_main_get_current_fs( const enkf_main_type * enkf_main ) { - return enkf_main->current_fs_case; -} - -bool enkf_main_fs_exists(const enkf_main_type * enkf_main, const char * input_case){ - bool exists = false; - char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , input_case); - if(enkf_fs_exists( new_mount_point )) - exists = true; - - free( new_mount_point ); - return exists; -} - - -void enkf_main_user_select_fs(enkf_main_type * enkf_main , const char * input_case ) { - const char * ens_path = model_config_get_enspath( enkf_main->model_config); - int root_version = enkf_fs_get_version104( ens_path ); - if (root_version == -1 || root_version == 105) { - if (input_case == NULL) { - char * current_mount_point = util_alloc_filename( ens_path , CURRENT_CASE , NULL); - - if (enkf_main_current_case_file_exists(enkf_main)) { - char * current_case = enkf_main_read_alloc_current_case_name(enkf_main); - enkf_main_select_fs(enkf_main, current_case); - free (current_case); - } else if (enkf_fs_exists( current_mount_point ) && util_is_link( current_mount_point )) { - /*If the current_case file does not exists, but the 'current' symlink does we use readlink to - get hold of the actual target before calling the enkf_main_select_fs() function. We then - write the current_case file and delete the symlink.*/ - char * target_case = util_alloc_atlink_target( ens_path , CURRENT_CASE ); - enkf_main_select_fs( enkf_main , target_case ); - unlink(current_mount_point); - enkf_main_write_current_case_file(enkf_main, target_case); - free( target_case ); - free( current_mount_point ); - } else - enkf_main_select_fs( enkf_main , DEFAULT_CASE ); // Selecting (a new) default case - } else - enkf_main_select_fs( enkf_main , input_case ); - } else { - fprintf(stderr,"Sorry: the filesystem located in %s must be upgraded before the current ERT version can read it.\n" , ens_path); - exit(1); - } -} /******************************************************************/ @@ -3075,54 +2601,27 @@ void enkf_main_update_obs_keys( enkf_main_type * enkf_main ) { /*****************************************************************/ - -void enkf_main_set_log_file( enkf_main_type * enkf_main , const char * log_file ) { - log_reopen( enkf_main->logh , log_file); -} - - -const char * enkf_main_get_log_file( const enkf_main_type * enkf_main ) { - return log_get_filename( enkf_main->logh ); -} - - -void enkf_main_set_log_level( enkf_main_type * enkf_main , int log_level ) { - log_set_level( enkf_main->logh , log_level); -} - - -int enkf_main_get_log_level( const enkf_main_type * enkf_main ) { - return log_get_level( enkf_main->logh ); -} - - -static void enkf_main_init_log( enkf_main_type * enkf_main , const config_type * config ) { - if (config_item_set( config , LOG_LEVEL_KEY)) - enkf_main_set_log_level( enkf_main , config_get_value_as_int(config , LOG_LEVEL_KEY)); - - if (config_item_set( config , LOG_FILE_KEY)) - enkf_main_set_log_file( enkf_main , config_get_value(config , LOG_FILE_KEY)); - else { - char * log_file = util_alloc_filename(NULL , enkf_main->user_config_file , DEFAULT_LOG_FILE); - enkf_main_set_log_file( enkf_main , log_file ); - free( log_file ); - } - - if (enkf_main->verbose) - printf("Activity will be logged to ..............: %s \n",log_get_filename( enkf_main->logh )); - log_add_message(enkf_main->logh , 1 , NULL , "ert configuration loaded" , false); -} - static void enkf_main_init_data_kw( enkf_main_type * enkf_main , config_type * config ) { - config_content_item_type * data_item = config_get_content_item( config , DATA_KW_KEY ); - hash_type * data_kw = NULL; - if (data_item) - data_kw = config_content_item_alloc_hash(data_item , true); - - enkf_main_install_data_kw( enkf_main , data_kw ); + { + const subst_list_type * define_list = config_get_define_list( config ); + for (int i=0; i < subst_list_get_size( define_list ); i++) { + const char * key = subst_list_iget_key( define_list , i ); + const char * value = subst_list_iget_value( define_list , i ); + enkf_main_add_data_kw( enkf_main , key , value ); + } + } - if (data_kw) - hash_free( data_kw ); + { + config_content_item_type * data_item = config_get_content_item( config , DATA_KW_KEY ); + hash_type * data_kw = NULL; + if (data_item) + data_kw = config_content_item_alloc_hash(data_item , true); + + enkf_main_install_data_kw( enkf_main , data_kw ); + + if (data_kw) + hash_free( data_kw ); + } } @@ -3136,17 +2635,18 @@ rng_config_type * enkf_main_get_rng_config( const enkf_main_type * enkf_main ) { return enkf_main->rng_config; } + void enkf_main_rng_init( enkf_main_type * enkf_main) { - if (enkf_main->rng != NULL) { - rng_free( enkf_main->rng ); - enkf_main->rng = NULL; - } - enkf_main->rng = rng_config_alloc_rng( enkf_main->rng_config ); + if (enkf_main->rng != NULL) + rng_config_init_rng(enkf_main->rng_config, enkf_main->rng); + else + enkf_main->rng = rng_config_alloc_init_rng( enkf_main->rng_config ); } void enkf_main_init_local_updates( enkf_main_type * enkf_main , const config_type * config ) { - if (model_config_has_history( enkf_main->model_config )) { + const enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + if (enkf_obs_have_obs( enkf_obs )) { enkf_main->local_config = local_config_alloc( ); /* First create the default ALL_ACTIVE configuration. */ @@ -3200,8 +2700,9 @@ static void enkf_main_bootstrap_site(enkf_main_type * enkf_main , const char * s site_config_add_config_items( config , true ); if (config_parse(config , site_config_file , "--" , INCLUDE_KEY , DEFINE_KEY , CONFIG_UNRECOGNIZED_WARN , false)) { site_config_init( enkf_main->site_config , config ); + analysis_config_load_all_external_modules_from_config(enkf_main->analysis_config, config); ert_report_list_site_init( enkf_main->report_list , config ); - ert_workflow_list_init( enkf_main->workflow_list , config , enkf_main->logh); + ert_workflow_list_init( enkf_main->workflow_list , config ); } else { fprintf(stderr , "** ERROR: Parsing site configuration file:%s failed \n\n" , site_config_file); config_fprintf_errors( config , true , stderr ); @@ -3294,7 +2795,8 @@ enkf_main_type * enkf_main_bootstrap(const char * _site_config, const char * _mo } - if (!util_file_exists(model_config)) util_exit("%s: can not locate user configuration file:%s \n",__func__ , model_config); + if (!util_file_exists(model_config)) + util_exit("%s: can not locate user configuration file:%s \n",__func__ , model_config); { config_type * config; enkf_main = enkf_main_alloc_empty( ); @@ -3322,15 +2824,31 @@ enkf_main_type * enkf_main_bootstrap(const char * _site_config, const char * _mo enkf_main_set_site_config_file( enkf_main , site_config ); enkf_main_set_user_config_file( enkf_main , model_config ); - enkf_main_init_log( enkf_main , config ); + + { + char * log_file; + int log_level = DEFAULT_LOG_LEVEL; + if(config_item_set( config , LOG_LEVEL_KEY)) + log_level = config_get_value_as_int(config , LOG_LEVEL_KEY); + + if (config_item_set( config , LOG_FILE_KEY)) + log_file = util_alloc_string_copy( config_get_value(config , LOG_FILE_KEY)); + else + log_file = util_alloc_filename( NULL , enkf_main->user_config_file , "log"); + + ert_log_init_log(log_level, log_file , enkf_main->verbose); + + free( log_file ); + } + /* Initializing the various 'large' sub config objects. */ rng_config_init( enkf_main->rng_config , config ); enkf_main_rng_init( enkf_main ); /* Must be called before the ensmeble is created. */ + enkf_main_init_subst_list( enkf_main ); - ert_workflow_list_init( enkf_main->workflow_list , config , enkf_main->logh ); - enkf_main_init_data_kw( enkf_main , config ); + ert_workflow_list_init( enkf_main->workflow_list , config ); analysis_config_load_internal_modules( enkf_main->analysis_config ); analysis_config_init( enkf_main->analysis_config , config ); @@ -3345,8 +2863,9 @@ enkf_main_type * enkf_main_bootstrap(const char * _site_config, const char * _mo ecl_config_get_last_history_restart( enkf_main->ecl_config ), ecl_config_get_sched_file(enkf_main->ecl_config) , ecl_config_get_refcase( enkf_main->ecl_config )); - + enkf_main_init_qc( enkf_main , config ); + enkf_main_init_data_kw( enkf_main , config ); enkf_main_update_num_cpu( enkf_main ); { const config_content_item_type * pred_item = config_get_content_item( config , SCHEDULE_PREDICTION_FILE_KEY ); @@ -3588,16 +3107,16 @@ const enkf_state_type ** enkf_main_get_ensemble_const( const enkf_main_type * en ----- - For performance reason model_config contains two bool vectors - __load_state and __load_result; if they are true the state and - summary are loaded from disk, otherwise no loading is - performed. This implies that if we do not want to internalize the - full state but for instance the pressure (i.e. for an RFT) we must - set the __load_state variable for the actual report step to - true. For this reason calls enkf_config_node_internalize() must be - accompanied by calls to model_config_set_load_state|results() - - this is ensured when using this function to manipulate the - configuration of internalization. + For performance reason model_config contains the bool vector + __load_eclipse_restart; if it is true the ECLIPSE restart state is + loaded from disk, otherwise no loading is performed. This implies + that if we do not want to internalize the full state but for + instance the pressure (i.e. for an RFT) we must set the + __load_state variable for the actual report step to true. For this + reason calls enkf_config_node_internalize() must be accompanied by + calls to model_config_set_load_state|results() - this is ensured + when using this function to manipulate the configuration of + internalization. */ @@ -3605,7 +3124,6 @@ const enkf_state_type ** enkf_main_get_ensemble_const( const enkf_main_type * en void enkf_main_init_internalization( enkf_main_type * enkf_main , run_mode_type run_mode ) { /* Clearing old internalize flags. */ model_config_init_internalization( enkf_main->model_config ); - ensemble_config_init_internalization( enkf_main->ensemble_config ); /* Internalizing the initial state. */ model_config_set_internalize_state( enkf_main->model_config , 0); @@ -3658,57 +3176,6 @@ void enkf_main_init_internalization( enkf_main_type * enkf_main , run_mode_type -/* Used by external application - this is a library ... */ -void enkf_main_list_users( set_type * users , const char * executable ) { - DIR * dir = opendir( DEFAULT_VAR_DIR ); - if (dir != NULL) { - struct dirent * dp; - do { - dp = readdir(dir); - if (dp != NULL) { - int pid; - if (util_sscanf_int( dp->d_name , &pid )) { - char * full_path = util_alloc_filename( DEFAULT_VAR_DIR , dp->d_name , NULL ); - bool add_user = false; - int uid; - - { - FILE * stream = util_fopen( full_path , "r"); - char this_executable[512]; - - if (fscanf( stream , "%s %d" , this_executable , &uid) == 2) { - if (executable != NULL) { - if (util_string_equal( this_executable , executable )) - add_user = true; - } else - add_user = true; - } - fclose( stream ); - } - - - /* Remove the pid files of dead processes. */ - if (!util_proc_alive( pid )) { - unlink( full_path ); - add_user = false; - } - - - if (add_user) { - struct passwd *pwd; - pwd = getpwuid( uid ); - if (pwd != NULL) - set_add_key( users , pwd->pw_name ); - } - - - free( full_path ); - } - } - } while (dp != NULL ); - closedir( dir ); - } -} const ext_joblist_type * enkf_main_get_installed_jobs( const enkf_main_type * enkf_main ) { @@ -3730,68 +3197,15 @@ int enkf_main_get_observation_count( const enkf_main_type * enkf_main, const cha -/** - This function will go through the filesystem and check that we have - initial data for all parameters and all realizations. If the second - argument mask is different from NULL, the function will only - consider the realizations for which mask is true (if mask == NULL - all realizations will be checked). -*/ - -static bool enkf_main_case_is_initialized__( const enkf_main_type * enkf_main , enkf_fs_type * fs , bool_vector_type * __mask) { - stringlist_type * parameter_keys = ensemble_config_alloc_keylist_from_var_type( enkf_main->ensemble_config , PARAMETER ); - bool_vector_type * mask; - bool initialized = true; - int ikey = 0; - if (__mask != NULL) - mask = __mask; - else - mask = bool_vector_alloc(0 , true ); - - while ((ikey < stringlist_get_size( parameter_keys )) && (initialized)) { - const enkf_config_node_type * config_node = ensemble_config_get_node( enkf_main->ensemble_config , stringlist_iget( parameter_keys , ikey) ); - int iens = 0; - do { - if (bool_vector_safe_iget( mask , iens)) { - node_id_type node_id = {.report_step = 0 , .iens = iens , .state = ANALYZED }; - initialized = enkf_config_node_has_node( config_node , fs , node_id); - } - iens++; - } while ((iens < enkf_main->ens_size) && (initialized)); - ikey++; - } - - stringlist_free( parameter_keys ); - if (__mask == NULL) - bool_vector_free( mask ); - return initialized; -} - - -bool enkf_main_is_initialized( const enkf_main_type * enkf_main , bool_vector_type * __mask) { - return enkf_main_case_is_initialized__(enkf_main , enkf_main->dbase , __mask); -} - -bool enkf_main_case_is_initialized( const enkf_main_type * enkf_main , const char * case_name , bool_vector_type * __mask) { - enkf_fs_type * fs = enkf_main_mount_alt_fs(enkf_main , case_name , true , false); - if (fs) { - bool initialized = enkf_main_case_is_initialized__(enkf_main , fs , __mask); - enkf_fs_umount( fs ); - return initialized; - } else - return false; -} - - void enkf_main_log_fprintf_config( const enkf_main_type * enkf_main , FILE * stream ) { fprintf( stream , CONFIG_COMMENTLINE_FORMAT ); fprintf( stream , CONFIG_COMMENT_FORMAT , "Here comes configuration information about the ERT logging."); fprintf( stream , CONFIG_KEY_FORMAT , LOG_FILE_KEY ); - fprintf( stream , CONFIG_ENDVALUE_FORMAT , enkf_main_get_log_file( enkf_main )); + fprintf( stream , CONFIG_ENDVALUE_FORMAT , ert_log_get_filename()); - if (enkf_main_get_log_level( enkf_main ) != DEFAULT_LOG_LEVEL) { + if (ert_log_get_log_level() != DEFAULT_LOG_LEVEL) { fprintf(stream , CONFIG_KEY_FORMAT , LOG_LEVEL_KEY ); - fprintf(stream , CONFIG_INT_FORMAT , enkf_main_get_log_level( enkf_main )); + fprintf(stream , CONFIG_INT_FORMAT , ert_log_get_log_level()); fprintf(stream , "\n"); } @@ -3801,11 +3215,7 @@ void enkf_main_log_fprintf_config( const enkf_main_type * enkf_main , FILE * str void enkf_main_install_SIGNALS(void) { - signal(SIGSEGV , util_abort_signal); /* Segmentation violation, i.e. overwriting memory ... */ - signal(SIGTERM , util_abort_signal); /* If killing the enkf program with SIGTERM (the default kill signal) you will get a backtrace. - Killing with SIGKILL (-9) will not give a backtrace.*/ - signal(SIGABRT , util_abort_signal); /* Signal abort. */ - signal(SIGILL , util_abort_signal); /* Signal illegal instruction. */ + util_install_signals(); } @@ -3815,9 +3225,6 @@ ert_templates_type * enkf_main_get_templates( enkf_main_type * enkf_main ) { return enkf_main->templates; } -void enkf_main_set_case_table( enkf_main_type * enkf_main , const char * case_table_file ) { - model_config_set_case_table( enkf_main->model_config , enkf_main->ens_size , case_table_file ); -} ert_report_list_type * enkf_main_get_report_list( const enkf_main_type * enkf_main ) { @@ -3943,10 +3350,12 @@ ert_workflow_list_type * enkf_main_get_workflow_list( enkf_main_type * enkf_main bool enkf_main_run_workflow( enkf_main_type * enkf_main , const char * workflow ) { ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list( enkf_main ); - if (ert_workflow_list_has_workflow( workflow_list , workflow)) - return ert_workflow_list_run_workflow( workflow_list , workflow , enkf_main); - else + if (ert_workflow_list_has_workflow( workflow_list , workflow)){ + return ert_workflow_list_run_workflow_blocking( workflow_list , workflow , enkf_main); + } + else{ return false; + } } @@ -3957,21 +3366,138 @@ void enkf_main_run_workflows( enkf_main_type * enkf_main , const stringlist_type } +void enkf_main_load_from_forward_model_from_gui(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, enkf_fs_type * fs){ + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + stringlist_type ** realizations_msg_list = util_calloc( ens_size , sizeof * realizations_msg_list ); + int iens = 0; + for (; iens < ens_size; ++iens) { + realizations_msg_list[iens] = stringlist_alloc_new(); + } + enkf_main_load_from_forward_model_with_fs(enkf_main, iter , iactive, realizations_msg_list, fs); + free(realizations_msg_list); +} + +void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list){ + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + enkf_main_load_from_forward_model_with_fs(enkf_main, iter, iactive, realizations_msg_list, fs); +} + +void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs) { + + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + int step1 = 0; + int step2 = -1; /** Observe that for the summary data it will load all the available data anyway. */ + run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + int result[ens_size]; + + arg_pack_type ** arg_list = util_calloc( ens_size , sizeof * arg_list ); + thread_pool_type * tp = thread_pool_alloc( 4 , true ); /* num_cpu - HARD coded. */ + + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + + int iens = 0; + for (; iens < ens_size; ++iens) { + result[iens] = 0; + arg_pack_type * arg_pack = arg_pack_alloc(); + arg_list[iens] = arg_pack; + + if (bool_vector_iget(iactive, iens)) { + enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); + arg_pack_append_ptr( arg_pack , enkf_state); /* 0: */ + arg_pack_append_ptr( arg_pack , fs ); /* 1: */ + arg_pack_append_int( arg_pack , step1 ); /* 2: This will be the load start parameter for the run_info struct. */ + arg_pack_append_int( arg_pack , step1 ); /* 3: Step1 */ + arg_pack_append_int( arg_pack , step2 ); /* 4: Step2 For summary data it will load the whole goddamn thing anyway.*/ + arg_pack_append_bool( arg_pack , true ); /* 5: Interactive */ + arg_pack_append_ptr(arg_pack, realizations_msg_list[iens]); /* 6: List of interactive mode messages. */ + arg_pack_append_bool( arg_pack, true ); /* 7: Manual load */ + arg_pack_append_int( arg_pack , iter ); /* 8: Iteration number */ + arg_pack_append_ptr(arg_pack, &result[iens]); /* 9: Result */ + + thread_pool_add_job( tp , enkf_state_load_from_forward_model_mt , arg_pack); + } + } + + thread_pool_join( tp ); + thread_pool_free( tp ); + printf("\n"); + + for (iens = 0; iens < ens_size; ++iens) { + if (bool_vector_iget(iactive, iens)) { + if (result[iens] & LOAD_FAILURE) + fprintf(stderr, "** Warning: Function %s: Realization %d load failure\n", __func__, iens); + else if (result[iens] & REPORT_STEP_INCOMPATIBLE) + fprintf(stderr, "** Warning: Function %s: Reliazation %d report step incompatible\n", __func__, iens); + } + arg_pack_free(arg_list[iens]); + } + free( arg_list ); +} + + + +char * enkf_main_alloc_abs_path_to_init_file(const enkf_main_type * enkf_main, const enkf_config_node_type * config_node) { + model_config_type * model_config = enkf_main_get_model_config(enkf_main); + char * runpath = NULL; + char * path_to_init_file = NULL; + char * abs_path_to_init_file = NULL; + bool forward_init = enkf_config_node_use_forward_init(config_node); + + if (forward_init) { + path_fmt_type * runpath_fmt = model_config_get_runpath_fmt(model_config); + runpath = path_fmt_alloc_path(runpath_fmt , false , 0, 0); /* Replace first %d with iens, if a second %d replace with iter */ + path_to_init_file = enkf_config_node_alloc_initfile(config_node, runpath, 0); + } else + path_to_init_file = enkf_config_node_alloc_initfile(config_node, NULL, 0); + + if (path_to_init_file) + abs_path_to_init_file = util_alloc_abs_path(path_to_init_file); + + if (abs_path_to_init_file && !util_file_exists(abs_path_to_init_file)) { + free(abs_path_to_init_file); + abs_path_to_init_file = NULL; + } + + if (runpath) + free(runpath); + if (path_to_init_file) + free(path_to_init_file); + + return abs_path_to_init_file; +} + + +bool enkf_main_export_field(const enkf_main_type * enkf_main, + const char * kw, + const char * path, + bool_vector_type * iactive, + field_file_format_type file_type, + int report_step, + state_enum state) +{ + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + bool result = enkf_main_export_field_with_fs(enkf_main, kw, path, iactive, file_type, report_step, state, fs); + return result; +} + + -bool enkf_main_export_field(const enkf_main_type * enkf_main, + +bool enkf_main_export_field_with_fs(const enkf_main_type * enkf_main, const char * kw, const char * path, - int_vector_type * realization_list, + bool_vector_type * iactive, field_file_format_type file_type, int report_step, - state_enum state) { + state_enum state, + enkf_fs_type * fs) { bool ret = false; - if (!util_char_in('%', strlen(path), path) || !util_char_in('d', strlen(path), path)) { - printf("EXPORT FIELD: There must be a %%d in the file name\n"); - return false; + if (util_int_format_count(path) < 1) { + printf("EXPORT FIELD: There must be a %%d in the file name\n"); + return ret; } - + const ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config(enkf_main); const enkf_config_node_type * config_node = NULL; bool node_found = false; @@ -3988,41 +3514,50 @@ bool enkf_main_export_field(const enkf_main_type * enkf_main, if (node_found) { enkf_node_type * node = NULL; + char * init_file = enkf_main_alloc_abs_path_to_init_file(enkf_main, config_node); + if (init_file) + printf("init_file found: \"%s\", exporting initial value for inactive cells\n", init_file); + else + printf("no init_file found, exporting 0 or fill value for inactive cells\n"); + int iens; - for (iens = 0; iens < int_vector_size(realization_list); ++iens) { - int realization_no = int_vector_iget(realization_list, iens); - enkf_fs_type * fs = enkf_main_get_fs(enkf_main); - node_id_type node_id = {.report_step = report_step , .iens = realization_no , .state = state }; - node = enkf_state_get_node(enkf_main->ensemble[realization_no] , kw); - if (node) { - if (enkf_node_try_load(node , fs , node_id)) { - path_fmt_type * export_path = path_fmt_alloc_path_fmt( path ); - char * filename = path_fmt_alloc_path( export_path , false , realization_no); - path_fmt_free(export_path); + for (iens = 0; iens < bool_vector_size(iactive); ++iens) { + if (bool_vector_iget(iactive, iens)) { + node_id_type node_id = {.report_step = report_step , .iens = iens , .state = state }; + node = enkf_state_get_node(enkf_main->ensemble[iens] , kw); + if (node) { + if (enkf_node_try_load(node , fs , node_id)) { + path_fmt_type * export_path = path_fmt_alloc_path_fmt( path ); + char * filename = path_fmt_alloc_path( export_path , false , iens); + path_fmt_free(export_path); - { - char * path; - util_alloc_file_components(filename , &path , NULL , NULL); - if (path != NULL) { - util_make_path( path ); - free( path ); + { + char * path; + util_alloc_file_components(filename , &path , NULL , NULL); + if (path != NULL) { + util_make_path( path ); + free( path ); + } } - } - { - const field_type * field = enkf_node_value_ptr(node); - const bool output_transform = true; - field_export(field , filename , NULL , file_type , output_transform); - ret = true; - } - free(filename); + { + const field_type * field = enkf_node_value_ptr(node); + const bool output_transform = true; + field_export(field , filename , NULL , file_type , output_transform, init_file); + ret = true; + } + free(filename); + } else + printf("%s : enkf_node_try_load returned returned false \n", __func__); } else - printf("%s : enkf_node_try_load returned returned false \n", __func__); - } else - printf("%s : enkf_state_get_node returned NULL for parameters %d, %s \n", __func__, realization_no, kw); + printf("%s : enkf_state_get_node returned NULL for parameters %d, %s \n", __func__, iens, kw); + } } + if (init_file) + free(init_file); } - + + if (ret) printf("Successful export of FIELD %s\n", kw); else @@ -4030,3 +3565,56 @@ bool enkf_main_export_field(const enkf_main_type * enkf_main, return ret; } + + +void enkf_main_rank_on_observations(enkf_main_type * enkf_main, + const char * ranking_key, + const stringlist_type * obs_ranking_keys, + const int_vector_type * steps) { + + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + const enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + const ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config(enkf_main); + const int history_length = enkf_main_get_history_length( enkf_main ); + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + + misfit_ensemble_type * misfit_ensemble = enkf_fs_get_misfit_ensemble( fs ); + misfit_ensemble_initialize( misfit_ensemble , ensemble_config , enkf_obs , fs , ens_size , history_length, false); + + ranking_table_type * ranking_table = enkf_main_get_ranking_table( enkf_main ); + + ranking_table_add_misfit_ranking( ranking_table , misfit_ensemble , obs_ranking_keys , steps , ranking_key ); + ranking_table_display_ranking( ranking_table , ranking_key); +} + + + +void enkf_main_rank_on_data(enkf_main_type * enkf_main, + const char * ranking_key, + const char * data_key, + bool sort_increasing, + int step) { + + ranking_table_type * ranking_table = enkf_main_get_ranking_table( enkf_main ); + ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config( enkf_main ); + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + state_enum state = FORECAST; + char * key_index; + + const enkf_config_node_type * config_node = ensemble_config_user_get_node( ensemble_config , data_key , &key_index); + if (config_node) { + ranking_table_add_data_ranking( ranking_table , sort_increasing , ranking_key , data_key , key_index , fs , config_node, step , state ); + ranking_table_display_ranking( ranking_table , ranking_key ); + } else { + fprintf(stderr,"** No data found for key %s\n", data_key); + } +} + + +void enkf_main_export_ranking(enkf_main_type * enkf_main, const char * ranking_key, const char * ranking_file) { + ranking_table_type * ranking_table = enkf_main_get_ranking_table( enkf_main ); + ranking_table_fwrite_ranking(ranking_table, ranking_key, ranking_file); +} + + +#include "enkf_main_manage_fs.c" diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c index 7ba05c795e..385e0b1e08 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c @@ -22,7 +22,29 @@ #include #include +#include + + +static bool_vector_type * alloc_iactive_vector_from_range(const stringlist_type * range, int startindex, int endindex, int ens_size) { + bool_vector_type * iactive; + int range_list_size = stringlist_get_size(range); + if ((range_list_size > startindex) && (range_list_size >= endindex)) { + char * arg_string = stringlist_alloc_joined_substring( range, startindex, endindex, ""); + iactive = bool_vector_alloc(ens_size, false); + string_util_update_active_mask( arg_string, iactive ); + free ( arg_string ); + } else { + iactive = bool_vector_alloc(ens_size, true); + } + return iactive; +} +void enkf_main_jobs_sleep(){ + while(true){ + printf("Hi from internal \n"); + sleep(1); + } +} void * enkf_main_exit_JOB(void * self , const stringlist_type * args ) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); @@ -31,6 +53,17 @@ void * enkf_main_exit_JOB(void * self , const stringlist_type * args ) { } +/** + This job is purely added to make sure we have a job in the + internal-gui/config subdirectory. As soon as there is a real job + there; this can be removed. +*/ + +void * enkf_main_dummy_JOB(void * self , const stringlist_type * args ) { + return NULL; +} + + void * enkf_main_assimilation_JOB( void * self , const stringlist_type * args ) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); int ens_size = enkf_main_get_ensemble_size( enkf_main ); @@ -41,41 +74,157 @@ void * enkf_main_assimilation_JOB( void * self , const stringlist_type * args ) return NULL; } +void * enkf_main_analysis_enkf_update_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + enkf_fs_type * target_fs = enkf_main_get_fs( enkf_main ); + int target_step; + int_vector_type * step_list; + + + // Argument 0: The number of the step to write to + if (stringlist_get_size(args) > 1) + util_sscanf_int(stringlist_iget( args , 1) , &target_step); + else + target_step = 0; + + // Argument 1 - ??: The timesteps to use in the update + if (stringlist_get_size( args ) > 2) { + char * step_args = stringlist_alloc_joined_substring(args , 2 , stringlist_get_size(args) , " "); + step_list = string_util_alloc_active_list( step_args ); + free( step_args ); + } else + step_list = int_vector_alloc(1,target_step); + + enkf_main_UPDATE( enkf_main , step_list , target_fs , target_step , SMOOTHER_UPDATE); + + int_vector_free( step_list ); + return NULL; +} + + + +#define CURRENT_CASE_STRING "*" +void * enkf_main_analysis_update_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + enkf_fs_type * target_fs; + int target_step; + int_vector_type * step_list; + bool decrease_ref = false; + + // Argument 0: Which case to write to + if (stringlist_get_size(args)) { + const char * target_fs_name = stringlist_iget( args , 0 ); + if (strcmp( target_fs_name , CURRENT_CASE_STRING) == 0) + target_fs = enkf_main_get_fs( enkf_main ); + else { + target_fs = enkf_main_mount_alt_fs( enkf_main , target_fs_name , true); + decrease_ref = true; + } + } else + target_fs = enkf_main_get_fs( enkf_main ); + { + + + // Argument 1: The number of the step to write to + if (stringlist_get_size(args) > 1) + util_sscanf_int(stringlist_iget( args , 1) , &target_step); + else + target_step = 0; + + // Argument 2 - ??: The timesteps to use in the update + if (stringlist_get_size( args ) > 2) { + char * step_args = stringlist_alloc_joined_substring(args , 2 , stringlist_get_size(args) , " "); + step_list = string_util_alloc_active_list( step_args ); + free( step_args ); + } else { + int stride = 1; + time_map_type * time_map = enkf_fs_get_time_map( enkf_main_get_fs( enkf_main )); + step_list = enkf_main_update_alloc_step_list( enkf_main , 0 , time_map_get_last_step( time_map ) , stride); + } + + enkf_main_UPDATE( enkf_main , step_list , target_fs , target_step , SMOOTHER_UPDATE); + + int_vector_free( step_list ); + + if (decrease_ref) + enkf_fs_decref( target_fs ); + } + return NULL; +} +#undef CURRENT_CASE_STRING + + + void * enkf_main_ensemble_run_JOB( void * self , const stringlist_type * args ) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); int ens_size = enkf_main_get_ensemble_size( enkf_main ); - bool_vector_type * iactive = bool_vector_alloc( 0 , true ); - - // Ignore args until string_utils is in place ..... - // if (stringlist_get_size( args ) + bool_vector_type * iactive = alloc_iactive_vector_from_range(args, 0, stringlist_get_size(args), ens_size); bool_vector_iset( iactive , ens_size - 1 , true ); enkf_main_run_exp( enkf_main , iactive , true , 0 , 0 , ANALYZED); + bool_vector_free(iactive); return NULL; } -void * enkf_main_smoother_JOB( void * self , const stringlist_type * args ) { +#define CURRENT_CASE_STRING "*" +static void * enkf_main_smoother_JOB__( void * self , int iter , const stringlist_type * args ) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc( ens_size , true ); - bool rerun = true; - const char * target_case = stringlist_iget( args , 0 ); - - enkf_main_run_smoother( enkf_main , target_case , iactive , rerun); + bool valid = true; + const char * target_case; + enkf_fs_type * target_fs = enkf_main_get_fs( enkf_main ); + + + // Argument 0: Which case to write to. Default current case. + if (stringlist_get_size(args)) { + target_case = stringlist_iget( args , 0 ); + if (strcmp( target_case , CURRENT_CASE_STRING) == 0) + target_case = enkf_fs_get_case_name(target_fs); + } else + target_case = enkf_fs_get_case_name(target_fs); + + //Argument 1: Rerun. Default false. + bool rerun = (stringlist_get_size(args) >= 2) ? stringlist_iget_as_bool(args, 1, &valid) : false; + + if (!valid) { + fprintf(stderr, "** Warning: Function %s : Second argument must be a bool value. Exiting job\n", __func__); + return NULL; + } + enkf_main_run_smoother( enkf_main , target_case , iactive , iter , rerun); bool_vector_free( iactive ); return NULL; } +#undef CURRENT_CASE_STRING + + +void * enkf_main_smoother_JOB( void * self , const stringlist_type * args ) { + return enkf_main_smoother_JOB__( self, 0 , args ); +} + + +void * enkf_main_smoother_with_iter_JOB( void * self , const stringlist_type * args ) { + int iter; + stringlist_type * sub_args = stringlist_alloc_shallow_copy_with_limits( args , 1 , stringlist_get_size( args ) - 1); + util_sscanf_int( stringlist_iget(args , 0 ) , &iter ); + + enkf_main_smoother_JOB__( self , iter , sub_args ); + + stringlist_free( sub_args ); + return NULL; +} + void * enkf_main_iterated_smoother_JOB( void * self , const stringlist_type * args ) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); - int ens_size = enkf_main_get_ensemble_size( enkf_main ); - bool_vector_type * iactive = bool_vector_alloc( 0 , true ); - - bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_iterated_ES( enkf_main); + const analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + analysis_iter_config_type * iter_config = analysis_config_get_iter_config(analysis_config); + int num_iter = analysis_iter_config_get_num_iterations(iter_config); + + enkf_main_run_iterated_ES( enkf_main , num_iter); return NULL; } @@ -112,89 +261,367 @@ void * enkf_main_scale_obs_std_JOB(void * self, const stringlist_type * args ) { return NULL; } +/*****************************************************************/ -void * enkf_main_export_field_JOB(void * self, const stringlist_type * args) { - const char * field = stringlist_iget(args, 0); - const char * file_name = stringlist_iget(args, 1); - int_vector_type * realization_list = string_util_alloc_active_list(""); //Realizations range: rest of optional input arguments - int report_step = 0; - util_sscanf_int(stringlist_iget(args,2), &report_step); - state_enum state = enkf_types_get_state_enum(stringlist_iget(args, 3)); +/* + Will create the new case if it does not exist. +*/ +void * enkf_main_select_case_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + const char * new_case = stringlist_iget( args , 0 ); + enkf_main_select_fs( enkf_main , new_case ); + return NULL; +} + + +void * enkf_main_create_case_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + const char * new_case = stringlist_iget( args , 0 ); + enkf_fs_type * fs = enkf_main_mount_alt_fs( enkf_main , new_case , true ); + enkf_fs_decref( fs ); + return NULL; +} + + + +void * enkf_main_init_case_from_existing_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + + const char * source_case = stringlist_iget( args , 0 ); + enkf_fs_type * source_fs = enkf_main_mount_alt_fs( enkf_main , source_case , true ); + { + enkf_fs_type * target_fs; + + if (stringlist_get_size(args) > 1) { + const char * current_case = enkf_main_get_current_fs(enkf_main); + const char * target_case = stringlist_iget( args , 1 ); + if (0 != strcmp(current_case, target_case)) { + target_fs = enkf_main_mount_alt_fs( enkf_main , target_case , true ); + } else + target_fs = enkf_fs_get_ref( enkf_main_get_fs(enkf_main) ); // Using get_ref so that we can unconditionally call decref() further down. + } else + target_fs = enkf_fs_get_ref( enkf_main_get_fs(enkf_main) ); // Using get_ref so that we can unconditionally call decref() further down. - char * range_str = stringlist_alloc_joined_substring( args , 4 , stringlist_get_size(args), ""); - string_util_update_active_list(range_str, realization_list); + enkf_main_init_case_from_existing(enkf_main, source_fs, 0, ANALYZED, target_fs); + enkf_fs_decref(target_fs); + } + enkf_fs_decref(source_fs); + + return NULL; +} + + +/*****************************************************************/ + +static void * enkf_main_load_results_JOB__( enkf_main_type * enkf_main , int iter , const stringlist_type * args) { + bool_vector_type * iactive = alloc_iactive_vector_from_range(args, 0, stringlist_get_size(args), enkf_main_get_ensemble_size(enkf_main)); + int ens_size = enkf_main_get_ensemble_size(enkf_main); + stringlist_type ** realizations_msg_list = util_calloc(ens_size, sizeof * realizations_msg_list); + for (int iens = 0; iens < ens_size; ++iens) + realizations_msg_list[iens] = stringlist_alloc_new(); + + enkf_main_load_from_forward_model(enkf_main, iter , iactive, realizations_msg_list); + + for (int iens = 0; iens < ens_size; ++iens) { + stringlist_type * msg = realizations_msg_list[iens]; + if (stringlist_get_size(msg)) { + int msg_count = 0; + for (; msg_count < stringlist_get_size(msg); ++msg_count) + fprintf(stderr, "** Warning: Function %s : Load of realization number %d returned the following warning: %s\n", __func__, iens, stringlist_iget(msg, msg_count)); + } + stringlist_free(msg); + } + free(realizations_msg_list); + bool_vector_free(iactive); + return NULL; +} + + +void * enkf_main_load_results_JOB( void * self , const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + int iter = 0; + { + const model_config_type * model_config = enkf_main_get_model_config( enkf_main ); + if (model_config_runpath_requires_iter( model_config )) + fprintf(stderr,"**Warning: the runpath format:%s requires an iteration number - using default:0. Use the job: LOAD_RESULT_ITER instead.\n" , model_config_get_runpath_as_char( model_config )); + } + return enkf_main_load_results_JOB__(enkf_main , iter , args ); +} + + +void * enkf_main_load_results_iter_JOB( void * self , const stringlist_type * args) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); - if (0 == int_vector_size(realization_list)) { - const char * range_str = util_alloc_sprintf("0-%d", enkf_main_get_ensemble_size( enkf_main )-1); - string_util_update_active_list(range_str, realization_list); - } + stringlist_type * iens_args = stringlist_alloc_shallow_copy_with_limits( args , 1 , stringlist_get_size( args ) - 1); + int iter; - field_file_format_type file_type = field_config_default_export_format(file_name); - if ((RMS_ROFF_FILE == file_type) || (ECL_GRDECL_FILE == file_type)) - enkf_main_export_field(enkf_main, field, file_name, realization_list, file_type, report_step, state); - else - printf("EXPORT_FIELD filename argument: File extension must be either .roff or .grdecl\n"); - - int_vector_free(realization_list); - return NULL; + util_sscanf_int( stringlist_iget( args , 0 ) , &iter); + enkf_main_load_results_JOB__(enkf_main , iter , iens_args ); + stringlist_free( iens_args ); + + return NULL; } -void * enkf_main_export_field_to_RMS_JOB(void * self, const stringlist_type * args) { + +/*****************************************************************/ + +static void enkf_main_jobs_export_field(const enkf_main_type * enkf_main, const stringlist_type * args, field_file_format_type file_type) { const char * field = stringlist_iget(args, 0); const char * file_name = stringlist_iget(args, 1); - int_vector_type * realization_list = string_util_alloc_active_list(""); //Realizations range: rest of optional input arguments int report_step = 0; util_sscanf_int(stringlist_iget(args,2), &report_step); state_enum state = enkf_types_get_state_enum(stringlist_iget(args, 3)); + + if (BOTH == state) { + fprintf(stderr,"** Field export jobs only supports state_enum ANALYZED or FORECAST, not BOTH.\n"); + return; + } + + bool_vector_type * iactive = alloc_iactive_vector_from_range(args, 4, stringlist_get_size(args), enkf_main_get_ensemble_size(enkf_main)); + enkf_main_export_field(enkf_main,field, file_name, iactive, file_type, report_step, state) ; + bool_vector_free(iactive); +} + + + +void * enkf_main_export_field_JOB(void * self, const stringlist_type * args) { + const char * file_name = stringlist_iget(args, 1); + field_file_format_type file_type = field_config_default_export_format(file_name); - char * range_str = stringlist_alloc_joined_substring( args , 4 , stringlist_get_size(args), ""); - string_util_update_active_list(range_str, realization_list); + if ((RMS_ROFF_FILE == file_type) || (ECL_GRDECL_FILE == file_type)) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + enkf_main_jobs_export_field(enkf_main, args, file_type); + } else + printf("EXPORT_FIELD filename argument: File extension must be either .roff or .grdecl\n"); + return NULL; +} + +void * enkf_main_export_field_to_RMS_JOB(void * self, const stringlist_type * args) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); - if (0 == int_vector_size(realization_list)) { - const char * range_str = util_alloc_sprintf("0-%d", enkf_main_get_ensemble_size( enkf_main )-1); - string_util_update_active_list(range_str, realization_list); - } - - char * file_name_with_ext = util_alloc_string_copy(file_name); - char *ext = strrchr(file_name_with_ext , '.'); - if (ext == NULL) { - file_name_with_ext = util_strcat_realloc(file_name_with_ext, ".roff"); + enkf_main_jobs_export_field(enkf_main, args, RMS_ROFF_FILE); + return NULL; +} + +void * enkf_main_export_field_to_ECL_JOB(void * self, const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + enkf_main_jobs_export_field(enkf_main, args, ECL_GRDECL_FILE); + return NULL; +} + + +/*****************************************************************/ + +void * enkf_main_rank_on_observations_JOB(void * self, const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + const char * ranking_name = stringlist_iget(args, 0); + + bool step_arguments = false; + bool obs_arguments = false; + int delimiter = 0; + { + delimiter = stringlist_find_first(args, "|"); + if (delimiter > -1) { + step_arguments = (delimiter > 1) ? true : false; + obs_arguments = (stringlist_get_size(args) > delimiter + 1) ? true : false; + } else if (stringlist_get_size(args) > 1) { + step_arguments = true; + delimiter = stringlist_get_size(args); + } } - enkf_main_export_field(enkf_main, field, file_name_with_ext, realization_list, RMS_ROFF_FILE, report_step, state); + int_vector_type * steps_vector = NULL; + { + char * report_steps = NULL; - int_vector_free(realization_list); - return NULL; + if (step_arguments) + report_steps = stringlist_alloc_joined_substring(args, 1, delimiter, ","); + else + report_steps = util_alloc_sprintf("0-%d", enkf_main_get_history_length(enkf_main)); + + steps_vector = string_util_alloc_value_list(report_steps); + + free(report_steps); + } + + + stringlist_type * obs_ranking_keys = NULL; + { + char * obs_key_char = NULL; + if (obs_arguments) + obs_key_char = stringlist_alloc_joined_substring( args , delimiter+1 , stringlist_get_size(args) , " "); + + enkf_obs_type * enkf_obs = enkf_main_get_obs(enkf_main); + obs_ranking_keys = enkf_obs_alloc_matching_keylist( enkf_obs , obs_key_char ); + + if ((obs_arguments) && (stringlist_get_size(obs_ranking_keys) == 0)) { + fprintf(stderr,"The input string : \"%s\" did not resolve to any valid observation keys. Job not started\n", obs_key_char); + return NULL; + } + + if (obs_arguments) + free(obs_key_char); + } + + + enkf_main_rank_on_observations(enkf_main, ranking_name, obs_ranking_keys, steps_vector); + + stringlist_free(obs_ranking_keys); + int_vector_free(steps_vector); + return NULL; } -void * enkf_main_export_field_to_ECL_JOB(void * self, const stringlist_type * args) { - const char * field = stringlist_iget(args, 0); - const char * file_name = stringlist_iget(args, 1); - int_vector_type * realization_list = string_util_alloc_active_list(""); //Realizations range: rest of optional input arguments - int report_step = 0; - util_sscanf_int(stringlist_iget(args,2), &report_step); - state_enum state = enkf_types_get_state_enum(stringlist_iget(args, 3)); - - char * range_str = stringlist_alloc_joined_substring( args , 4 , stringlist_get_size(args), ""); - string_util_update_active_list(range_str, realization_list); - + +void * enkf_main_rank_on_data_JOB(void * self, const stringlist_type * args) { enkf_main_type * enkf_main = enkf_main_safe_cast( self ); - if (0 == int_vector_size(realization_list)) { - const char * range_str = util_alloc_sprintf("0-%d", enkf_main_get_ensemble_size( enkf_main )-1); - string_util_update_active_list(range_str, realization_list); - } - - char * file_name_with_ext = util_alloc_string_copy(file_name); - char *ext = strrchr(file_name_with_ext , '.'); - if (ext == NULL) - file_name_with_ext = util_strcat_realloc(file_name_with_ext, ".grdecl"); - - enkf_main_export_field(enkf_main, field, file_name_with_ext, realization_list, ECL_GRDECL_FILE, report_step, state); + const char * ranking_name = stringlist_iget(args, 0); + const char * data_key = stringlist_iget(args, 1); + bool valid = true; + bool sort_increasing = stringlist_iget_as_bool(args, 2, &valid); + + if (!valid) { + fprintf(stderr,"** Third argument \"sort increasing\" not recognized as bool value, job not started\n"); + return NULL; + } - int_vector_free(realization_list); - return NULL; + int report_step = (stringlist_get_size(args) > 3) ? stringlist_iget_as_int(args, 3, &valid) : enkf_main_get_history_length(enkf_main) ; + if (!valid) { + fprintf(stderr,"** Fourth argument \"step\" not recognized as integer value, job not started\n"); + return NULL; + } + + if (report_step < 0) { + fprintf(stderr,"** Negative report step, job not started\n"); + return NULL; + } + + enkf_main_rank_on_data(enkf_main, ranking_name, data_key, sort_increasing, report_step); + return NULL; +} + + +void * enkf_main_export_ranking_JOB(void * self, const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + const char * ranking_name = stringlist_iget(args, 0); + const char * ranking_file = stringlist_iget(args, 1); + + enkf_main_export_ranking(enkf_main, ranking_name, ranking_file); + return NULL; +} + +void * enkf_main_init_misfit_table_JOB(void * self, const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + int history_length = enkf_main_get_history_length(enkf_main); + enkf_obs_type * enkf_obs = enkf_main_get_obs(enkf_main); + int ens_size = enkf_main_get_ensemble_size(enkf_main); + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + bool force_update = true; + const ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config(enkf_main); + + + misfit_ensemble_type * misfit_ensemble = enkf_fs_get_misfit_ensemble( fs ); + misfit_ensemble_initialize( misfit_ensemble , ensemble_config , enkf_obs , fs , ens_size , history_length, force_update); + + return NULL; +} + + + + +static void enkf_main_export_runpath_file(enkf_main_type * enkf_main, + const int_vector_type * realizations, + const int_vector_type * iterations) { + + ecl_config_type * ecl_config = enkf_main_get_ecl_config(enkf_main); + const model_config_type * model_config = enkf_main_get_model_config(enkf_main); + const char * basename_fmt = ecl_config_get_eclbase(ecl_config); + const char * runpath_fmt = model_config_get_runpath_as_char(model_config); + + + runpath_list_type * runpath_list = runpath_list_alloc(); + char * cwd = util_alloc_cwd(); + + for (int iter = 0; iter < int_vector_size(iterations); ++iter) { + for (int iens = 0; iens < int_vector_size(realizations); ++iens) { + int iter_value = int_vector_iget(iterations, iter); + int iens_value = int_vector_iget(realizations, iens); + char * basename = NULL; + if (basename_fmt) + basename = util_alloc_sprintf(basename_fmt, iens_value); + else + basename = util_alloc_sprintf("--%d", iens_value); + char * runpath = NULL; + if (model_config_runpath_requires_iter(model_config)) { + runpath = util_alloc_sprintf(runpath_fmt, iens_value, iter_value); + } + else + runpath = util_alloc_sprintf(runpath_fmt, iens_value); + + runpath_list_add(runpath_list, iens_value, iter_value, runpath, basename); + + free(basename); + free(runpath); + } + } + + { + qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); + const char * runpath_file_name = qc_module_get_runpath_list_file(qc_module); + FILE * file_stream = util_mkdir_fopen(runpath_file_name, "w"); + runpath_list_fprintf(runpath_list, file_stream); + fclose(file_stream); + } + + free(cwd); + runpath_list_free(runpath_list); } + + +void * enkf_main_export_runpath_file_JOB(void * self, const stringlist_type * args) { + enkf_main_type * enkf_main = enkf_main_safe_cast( self ); + int ensemble_size = enkf_main_get_ensemble_size(enkf_main); + analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); + analysis_iter_config_type * iter_config = analysis_config_get_iter_config(analysis_config); + int num_iterations = analysis_iter_config_get_num_iterations(iter_config); + const model_config_type * model_config = enkf_main_get_model_config(enkf_main); + int_vector_type * realizations = int_vector_alloc(1, 0); + int_vector_init_range(realizations, 0, ensemble_size-1, 1); + int_vector_type * iterations = int_vector_alloc(1, 0); + + + if (stringlist_get_size(args) > 0) { + int offset = 0; + while (true) { + if (offset == stringlist_get_size( args )) + break; + if (0 == strcmp("|" , stringlist_iget( args, offset ))) + break; + ++offset; + } + + if (0 != strcmp("*", stringlist_iget(args,0))) { + char * range_str = stringlist_alloc_joined_substring( args, 0, offset, ""); + string_util_init_value_list(range_str, realizations); + free(range_str); + } + + if ((offset < stringlist_get_size(args)) && model_config_runpath_requires_iter(model_config)) { + if (0 == strcmp("*", stringlist_iget(args, (offset+1)))) + int_vector_init_range(iterations, 0, num_iterations-1, 1); + else { + char * range_str = stringlist_alloc_joined_substring( args, offset+1, stringlist_get_size(args), ""); + string_util_init_value_list(range_str, iterations); + free(range_str); + } + } + } + + enkf_main_export_runpath_file(enkf_main, realizations, iterations); + + int_vector_free(realizations); + int_vector_free(iterations); + + return NULL; +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c new file mode 100644 index 0000000000..3d19d2ffc4 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c @@ -0,0 +1,644 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_main_manage_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +bool enkf_main_case_is_current(const enkf_main_type * enkf_main , const char * case_path) { + char * mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); + const char * current_mount_point = NULL; + bool is_current; + + if (enkf_main->dbase != NULL) + current_mount_point = enkf_fs_get_mount_point( enkf_main->dbase ); + + is_current = util_string_equal( mount_point , current_mount_point ); + free( mount_point ); + return is_current; +} + +static bool enkf_main_current_case_file_exists( const enkf_main_type * enkf_main) { + const char * ens_path = model_config_get_enspath( enkf_main->model_config); + char * current_case_file = util_alloc_filename(ens_path, CURRENT_CASE_FILE, NULL); + bool exists = util_file_exists(current_case_file); + free(current_case_file); + return exists; +} + +char* enkf_main_read_alloc_current_case_name(const enkf_main_type * enkf_main) { + char * current_case = NULL; + const char * ens_path = model_config_get_enspath( enkf_main->model_config); + char * current_case_file = util_alloc_filename(ens_path, CURRENT_CASE_FILE, NULL); + if (enkf_main_current_case_file_exists(enkf_main)) { + FILE * stream = util_fopen( current_case_file , "r"); + current_case = util_fscanf_alloc_token(stream); + util_fclose(stream); + } else { + util_abort("%s: File: storage/current_case not found, aborting! \n",__func__); + } + free(current_case_file); + return current_case; +} + + +stringlist_type * enkf_main_alloc_caselist( const enkf_main_type * enkf_main ) { + stringlist_type * case_list = stringlist_alloc_new( ); + { + const char * ens_path = model_config_get_enspath( enkf_main->model_config ); + DIR * ens_dir = opendir( ens_path ); + if (ens_dir != NULL) { + int ens_fd = dirfd( ens_dir ); + if (ens_fd != -1) { + struct dirent * dp; + do { + dp = readdir( ens_dir ); + if (dp != NULL) { + if (!(util_string_equal( dp->d_name , ".") || util_string_equal(dp->d_name , ".."))) { + if (!util_string_equal( dp->d_name , CURRENT_CASE_FILE)) { + char * full_path = util_alloc_filename( ens_path , dp->d_name , NULL); + if (util_is_directory( full_path )) + stringlist_append_copy( case_list , dp->d_name ); + free( full_path); + } + } + } + } while (dp != NULL); + } + } + closedir( ens_dir ); + } + return case_list; +} + + +void enkf_main_set_case_table( enkf_main_type * enkf_main , const char * case_table_file ) { + model_config_set_case_table( enkf_main->model_config , enkf_main->ens_size , case_table_file ); +} + + + +static void * enkf_main_initialize_from_scratch_mt(void * void_arg) { + arg_pack_type * arg_pack = arg_pack_safe_cast( void_arg ); + enkf_main_type * enkf_main = arg_pack_iget_ptr( arg_pack , 0); + const stringlist_type * param_list = arg_pack_iget_const_ptr( arg_pack , 1 ); + int iens = arg_pack_iget_int( arg_pack , 2 ); + init_mode_enum init_mode = arg_pack_iget_int( arg_pack , 3 ); + enkf_state_type * state = enkf_main_iget_state( enkf_main , iens); + enkf_state_initialize( state , enkf_main_get_fs( enkf_main ) , param_list , init_mode); + return NULL; +} + +void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_main , const stringlist_type * param_list ,const bool_vector_type * iens_mask , init_mode_enum init_mode) { + int num_cpu = 4; + int ens_size = enkf_main_get_ensemble_size( enkf_main ); + thread_pool_type * tp = thread_pool_alloc( num_cpu , true ); + arg_pack_type ** arg_list = util_calloc( ens_size , sizeof * arg_list ); + int i; + int iens; + + for (iens = 0; iens < ens_size; iens++) { + arg_list[iens] = arg_pack_alloc(); + if (bool_vector_safe_iget(iens_mask , iens)) { + arg_pack_append_ptr( arg_list[iens] , enkf_main ); + arg_pack_append_const_ptr( arg_list[iens] , param_list ); + arg_pack_append_int( arg_list[iens] , iens ); + arg_pack_append_int( arg_list[iens] , init_mode ); + + thread_pool_add_job( tp , enkf_main_initialize_from_scratch_mt , arg_list[iens]); + } + + } + thread_pool_join( tp ); + for (i = 0; i < ens_size; i++){ + arg_pack_free( arg_list[i] ); + } + free( arg_list ); + thread_pool_free( tp ); +} + +void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , const stringlist_type * param_list , int iens1 , int iens2, init_mode_enum init_mode) { + int iens; + int ens_size = enkf_main_get_ensemble_size( enkf_main ); + bool_vector_type * iens_mask = bool_vector_alloc(ens_size,false); + + for (iens = iens1; iens <= iens2; iens++) { + bool_vector_iset( iens_mask , iens , true ); + } + enkf_main_initialize_from_scratch_with_bool_vector(enkf_main, param_list, iens_mask, init_mode); + bool_vector_free(iens_mask); +} + + + + +static void enkf_main_copy_ensemble( const enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + enkf_fs_type * target_case_fs, + int target_report_step, + state_enum target_state, + const bool_vector_type * iens_mask, + const char * ranking_key , /* It is OK to supply NULL - but if != NULL it must exist */ + const stringlist_type * node_list) { + + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + state_map_type * target_state_map = enkf_fs_get_state_map(target_case_fs); + + { + int * ranking_permutation; + int inode , src_iens; + + if (ranking_key != NULL) { + ranking_table_type * ranking_table = enkf_main_get_ranking_table( enkf_main ); + ranking_permutation = (int *) ranking_table_get_permutation( ranking_table , ranking_key ); + } else { + ranking_permutation = util_calloc( ens_size , sizeof * ranking_permutation ); + for (src_iens = 0; src_iens < ens_size; src_iens++) + ranking_permutation[src_iens] = src_iens; + } + + for (inode =0; inode < stringlist_get_size( node_list ); inode++) { + enkf_config_node_type * config_node = ensemble_config_get_node( enkf_main_get_ensemble_config(enkf_main) , stringlist_iget( node_list , inode )); + for (src_iens = 0; src_iens < enkf_main_get_ensemble_size( enkf_main ); src_iens++) { + if (bool_vector_safe_iget(iens_mask , src_iens)) { + int target_iens = ranking_permutation[src_iens]; + node_id_type src_id = {.report_step = source_report_step , .iens = src_iens , .state = source_state }; + node_id_type target_id = {.report_step = target_report_step , .iens = target_iens , .state = target_state }; + + /* The copy is careful ... */ + if (enkf_config_node_has_node( config_node , source_case_fs , src_id)) + enkf_node_copy( config_node , + source_case_fs , target_case_fs , + src_id , target_id ); + + if (0 == target_report_step) + state_map_iset(target_state_map, target_iens, STATE_INITIALIZED); + } + } + } + + if (ranking_permutation == NULL) + free( ranking_permutation ); + } +} + + + +void enkf_main_init_current_case_from_existing(enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state) { + + enkf_fs_type * current_fs = enkf_main_get_fs(enkf_main); + + enkf_main_init_case_from_existing(enkf_main, + source_case_fs, + source_report_step, + source_state, + current_fs); + + enkf_main_invalidate_cache(enkf_main); +} + + +void enkf_main_init_current_case_from_existing_custom(enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + stringlist_type * node_list, + bool_vector_type * iactive) { + + enkf_fs_type * current_fs = enkf_main_get_fs(enkf_main); + + enkf_main_init_case_from_existing_custom(enkf_main, + source_case_fs, + source_report_step, + source_state, + current_fs, + node_list, + iactive); + + enkf_main_invalidate_cache(enkf_main); +} + + +void enkf_main_init_case_from_existing(const enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + enkf_fs_type * target_case_fs ) { + + stringlist_type * param_list = ensemble_config_alloc_keylist_from_var_type( enkf_main_get_ensemble_config(enkf_main) , PARAMETER ); /* Select only paramters - will fail for GEN_DATA of type DYNAMIC_STATE. */ + int target_report_step = 0; + state_enum target_state = ANALYZED; + bool_vector_type * iactive = bool_vector_alloc( 0 , true ); + + enkf_main_copy_ensemble(enkf_main, + source_case_fs, + source_report_step, + source_state, + target_case_fs, + target_report_step, + target_state , + iactive, + NULL, + param_list); + + + enkf_fs_fsync(target_case_fs); + + bool_vector_free(iactive); + stringlist_free(param_list); +} + + +void enkf_main_init_case_from_existing_custom(const enkf_main_type * enkf_main, + enkf_fs_type * source_case_fs, + int source_report_step, + state_enum source_state, + enkf_fs_type * target_case_fs, + stringlist_type * node_list, + bool_vector_type * iactive) { + + int target_report_step = 0; + state_enum target_state = ANALYZED; + + enkf_main_copy_ensemble(enkf_main, + source_case_fs, + source_report_step, + source_state, + target_case_fs, + target_report_step, + target_state , + iactive, + NULL, + node_list); + + enkf_fs_fsync(target_case_fs); +} + + + + +/** + This function will go through the filesystem and check that we have + initial data for all parameters and all realizations. If the second + argument mask is different from NULL, the function will only + consider the realizations for which mask is true (if mask == NULL + all realizations will be checked). +*/ + +static bool enkf_main_case_is_initialized__( const enkf_main_type * enkf_main , enkf_fs_type * fs , bool_vector_type * __mask) { + stringlist_type * parameter_keys = ensemble_config_alloc_keylist_from_var_type( enkf_main->ensemble_config , PARAMETER ); + bool_vector_type * mask; + bool initialized = true; + int ikey = 0; + if (__mask != NULL) + mask = __mask; + else + mask = bool_vector_alloc(0 , true ); + + while ((ikey < stringlist_get_size( parameter_keys )) && (initialized)) { + const enkf_config_node_type * config_node = ensemble_config_get_node( enkf_main->ensemble_config , stringlist_iget( parameter_keys , ikey) ); + int iens = 0; + do { + if (bool_vector_safe_iget( mask , iens)) { + node_id_type node_id = {.report_step = 0 , .iens = iens , .state = ANALYZED }; + initialized = enkf_config_node_has_node( config_node , fs , node_id); + } + iens++; + } while ((iens < enkf_main->ens_size) && (initialized)); + ikey++; + } + + stringlist_free( parameter_keys ); + if (__mask == NULL) + bool_vector_free( mask ); + return initialized; +} + + + +bool enkf_main_case_is_initialized( const enkf_main_type * enkf_main , const char * case_name , bool_vector_type * __mask) { + enkf_fs_type * fs = enkf_main_mount_alt_fs(enkf_main , case_name , false ); + if (fs) { + bool initialized = enkf_main_case_is_initialized__(enkf_main , fs , __mask); + enkf_fs_decref( fs ); + return initialized; + } else + return false; +} + + + +bool enkf_main_is_initialized( const enkf_main_type * enkf_main , bool_vector_type * __mask) { + return enkf_main_case_is_initialized__(enkf_main , enkf_main->dbase , __mask); +} + + +static void update_case_log(enkf_main_type * enkf_main , const char * case_path) { + /* : Update a small text file with the name of the host currently + running ert, the pid number of the process, the active case + and when it started. + + If the previous shutdown was unclean the file will be around, + and we will need the info from the previous invocation which + is in the file. For that reason we open with mode 'a' instead + of 'w'. + */ + + const char * ens_path = model_config_get_enspath( enkf_main->model_config); + + { + int buffer_size = 256; + char * current_host = util_alloc_filename( ens_path , CASE_LOG , NULL ); + FILE * stream = util_fopen( current_host , "a"); + + fprintf(stream , "CASE:%-16s " , case_path ); + fprintf(stream , "PID:%-8d " , getpid()); + { + char hostname[buffer_size]; + gethostname( hostname , buffer_size ); + fprintf(stream , "HOST:%-16s " , hostname ); + } + + + { + int year,month,day,hour,minute,second; + time_t now = time( NULL ); + + util_set_datetime_values( now , &second , &minute , &hour , &day , &month , &year ); + + fprintf(stream , "TIME:%02d/%02d/%4d-%02d.%02d.%02d\n" , day , month , year , hour , minute , second); + } + fclose( stream ); + free( current_host ); + } +} + + + +static void enkf_main_write_current_case_file( const enkf_main_type * enkf_main, const char * case_path) { + const char * ens_path = model_config_get_enspath( enkf_main->model_config); + const char * base = CURRENT_CASE_FILE; + char * current_case_file = util_alloc_filename(ens_path , base, NULL); + FILE * stream = util_fopen( current_case_file , "w"); + fprintf(stream , case_path ); + util_fclose(stream); + free(current_case_file); +} + + +static void enkf_main_update_current_case( enkf_main_type * enkf_main , const char * case_path /* Can be NULL */) { + if (!case_path) + case_path = enkf_fs_get_case_name( enkf_main_get_fs(enkf_main) ); + + enkf_main_write_current_case_file(enkf_main, case_path); + update_case_log(enkf_main , case_path); + + enkf_main_gen_data_special( enkf_main ); + enkf_main_add_subst_kw( enkf_main , "ERT-CASE" , enkf_main_get_current_fs( enkf_main ) , "Current case" , true ); + enkf_main_add_subst_kw( enkf_main , "ERTCASE" , enkf_main_get_current_fs( enkf_main ) , "Current case" , true ); +} + + + +static void enkf_main_create_fs( const enkf_main_type * enkf_main , const char * case_path ) { + char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); + + enkf_fs_create_fs( new_mount_point, + model_config_get_dbase_type( enkf_main->model_config ) , + model_config_get_dbase_args( enkf_main->model_config )); + + free( new_mount_point ); +} + + +const char * enkf_main_get_mount_root( const enkf_main_type * enkf_main) { + return model_config_get_enspath( enkf_main->model_config); +} + + + +char * enkf_main_alloc_mount_point( const enkf_main_type * enkf_main , const char * case_path) { + char * mount_point; + if (util_is_abs_path( case_path )) + mount_point = util_alloc_string_copy( case_path ); + else + mount_point = util_alloc_filename( model_config_get_enspath( enkf_main->model_config) , case_path , NULL); + return mount_point; +} + +/* + Return a weak reference - i.e. the refcount is not increased. +*/ +enkf_fs_type * enkf_main_get_fs(const enkf_main_type * enkf_main) { + return enkf_main->dbase; +} + + +enkf_fs_type * enkf_main_get_fs_ref(const enkf_main_type * enkf_main) { + return enkf_fs_get_ref( enkf_main->dbase ); +} + + +const char * enkf_main_get_current_fs( const enkf_main_type * enkf_main ) { + return enkf_fs_get_case_name( enkf_main->dbase ); +} + + + +/* + This function will return a valid enkf_fs instance; either just a + pointer to the current enkf_main->dbase, or alternatively it will + create a brand new fs instance. Because we do not really now whether + a new instance has been created or not resource handling becomes + slightly non trivial: + + + 1. When calling scope is finished with the enkf_fs instance it + must call enkf_fs_decref(); the enkf_fs_decref() function will + close the filesystem and free all resources when the reference + count has reached zero. +*/ + + +enkf_fs_type * enkf_main_mount_alt_fs(const enkf_main_type * enkf_main , const char * case_path , bool create) { + if (enkf_main_case_is_current( enkf_main , case_path )) { + // Fast path - we just return a reference to the currently selected case; + // with increased refcount. + enkf_fs_incref( enkf_main->dbase ); + return enkf_main->dbase; + } else { + // We have asked for an alterantive fs - must mount and possibly create that first. + enkf_fs_type * new_fs = NULL; + if (case_path != NULL) { + char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); + + if (!enkf_fs_exists( new_mount_point )) { + if (create) + enkf_main_create_fs( enkf_main , case_path ); + } + + new_fs = enkf_fs_mount( new_mount_point ); + if (new_fs) { + const model_config_type * model_config = enkf_main_get_model_config( enkf_main ); + const ecl_sum_type * refcase = model_config_get_refcase( model_config ); + + if (refcase) { + time_map_type * time_map = enkf_fs_get_time_map( new_fs ); + if (time_map_attach_refcase( time_map , refcase)) + time_map_set_strict( time_map , false ); + else + ert_log_add_fmt_message(1 , stderr , "Warning mismatch between refcase:%s and existing case:%s" , ecl_sum_get_case( refcase ) , new_mount_point); + } + } + + free( new_mount_point ); + } + return new_fs; + } +} + + +/** + The enkf_fs instances employ a simple reference counting + scheme. The main point with this system is to avoid opening the + full timesystem more than necessary (this is quite compute + intensive). This is essentially achieved by: + + 1. Create new fs instances by using the function + enkf_main_mount_alt_fs() - depending on the input arguments + this will either create a new enkf_fs instance or it will + just return a pointer to currently open fs instance; with an + increased refcount. + + 2. When you are finished with working with filesystem pointer + call enkf_fs_unmount() - this will reduce the refcount with + one, and eventually discard the complete datastructure when + the refcount has reached zero. + + 3. By using the function enkf_main_get_fs() / + enkf_fs_get_weakref() you get a pointer to the current fs + instance WITHOUT INCREASING THE REFCOUNT. This means that + scope calling one of these functions does not get any + ownership to the enkf_fs instance. + + The enkf_main instance will take ownership of the enkf_fs instance; + this implies that the calling scope must have proper ownership of + the fs instance which is passed in. The return value from + enkf_main_get_fs() can NOT be used as input to this function; this + is not checked for in any way - but the crash will be horrible if + this is not adhered to. +*/ + + +void enkf_main_set_fs( enkf_main_type * enkf_main , enkf_fs_type * fs , const char * case_path /* Can be NULL */) { + if (enkf_main->dbase != fs) { + enkf_fs_incref( fs ); + + if (enkf_main->dbase) + enkf_fs_decref( enkf_main->dbase ); + + enkf_main->dbase = fs; + enkf_main_invalidate_cache(enkf_main); + enkf_main_update_current_case(enkf_main, case_path); + } +} + + + +void enkf_main_select_fs( enkf_main_type * enkf_main , const char * case_path ) { + if (enkf_main_case_is_current( enkf_main , case_path )) + return; /* We have tried to select the currently selected case - just return. */ + else { + enkf_fs_type * new_fs = enkf_main_mount_alt_fs( enkf_main , case_path , true ); + if (enkf_main->dbase == new_fs) + util_abort("%s : return reference to current FS in situation where that should not happen.\n",__func__); + + if (new_fs != NULL) + enkf_main_set_fs( enkf_main , new_fs , case_path); + else { + const char * ens_path = model_config_get_enspath( enkf_main->model_config ); + util_exit("%s: select filesystem %s:%s failed \n",__func__ , ens_path , case_path ); + } + enkf_fs_decref( new_fs ); + } +} + + +void enkf_main_user_select_fs(enkf_main_type * enkf_main , const char * input_case ) { + const char * ens_path = model_config_get_enspath( enkf_main->model_config); + int root_version = enkf_fs_get_version104( ens_path ); + if (root_version == -1 || root_version == 105) { + if (input_case == NULL) { + char * current_mount_point = util_alloc_filename( ens_path , CURRENT_CASE , NULL); + + if (enkf_main_current_case_file_exists(enkf_main)) { + char * current_case = enkf_main_read_alloc_current_case_name(enkf_main); + enkf_main_select_fs(enkf_main, current_case); + free (current_case); + } else if (enkf_fs_exists( current_mount_point ) && util_is_link( current_mount_point )) { + /*If the current_case file does not exists, but the 'current' symlink does we use readlink to + get hold of the actual target before calling the enkf_main_select_fs() function. We then + write the current_case file and delete the symlink.*/ + char * target_case = util_alloc_atlink_target( ens_path , CURRENT_CASE ); + enkf_main_select_fs( enkf_main , target_case ); + unlink(current_mount_point); + enkf_main_write_current_case_file(enkf_main, target_case); + free( target_case ); + } else + enkf_main_select_fs( enkf_main , DEFAULT_CASE ); // Selecting (a new) default case + + free( current_mount_point ); + } else + enkf_main_select_fs( enkf_main , input_case ); + } else { + fprintf(stderr,"Sorry: the filesystem located in %s must be upgraded before the current ERT version can read it.\n" , ens_path); + exit(1); + } +} + + + +bool enkf_main_fs_exists(const enkf_main_type * enkf_main, const char * input_case){ + bool exists = false; + char * new_mount_point = enkf_main_alloc_mount_point( enkf_main , input_case); + if(enkf_fs_exists( new_mount_point )) + exists = true; + + free( new_mount_point ); + return exists; +} + + + +state_map_type * enkf_main_alloc_readonly_state_map( const enkf_main_type * enkf_main , const char * case_path) { + char * mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); + state_map_type * state_map = enkf_fs_alloc_readonly_state_map( mount_point ); + free( mount_point ); + return state_map; +} + + + +time_map_type * enkf_main_alloc_readonly_time_map( const enkf_main_type * enkf_main , const char * case_path ) { + char * mount_point = enkf_main_alloc_mount_point( enkf_main , case_path ); + time_map_type * time_map = enkf_fs_alloc_readonly_time_map( mount_point ); + free( mount_point ); + return time_map; +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_node.c b/ThirdParty/Ert/devel/libenkf/src/enkf_node.c index dc0e742490..f1d0d60c79 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_node.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_node.c @@ -30,6 +30,7 @@ #include #include +#include #include #include #include @@ -74,10 +75,10 @@ | | | | | | field_config | | | | | | | | ===| | field | o------ | | - | | | | | - ===| | ===================== - | | - ================ + | | | | | + === | | ===================== + | | + ================ To summarize in words: @@ -217,10 +218,10 @@ struct enkf_node_struct { iaddsqr_ftype * iaddsqr; /******************************************************************/ - bool vector_storage; - char *node_key; /* The (hash)key this node is identified with. */ - void *data; /* A pointer to the underlying enkf_object, i.e. gen_kw_type instance, or a field_type instance or ... */ - const enkf_config_node_type *config; /* A pointer to a enkf_config_node instance (which again cointans a pointer to the config object of data). */ + bool vector_storage; + char *node_key; /* The (hash)key this node is identified with. */ + void *data; /* A pointer to the underlying enkf_object, i.e. gen_kw_type instance, or a field_type instance or ... */ + const enkf_config_node_type *config; /* A pointer to a enkf_config_node instance (which again cointans a pointer to the config object of data). */ /*****************************************************************/ vector_type *container_nodes; @@ -311,7 +312,7 @@ void * enkf_node_value_ptr(const enkf_node_type * enkf_node) { spesific file. */ -void enkf_node_ecl_write(const enkf_node_type *enkf_node , const char *path , fortio_type * restart_fortio , int report_step) { +void enkf_node_ecl_write(const enkf_node_type *enkf_node , const char *path , void * filestream , int report_step) { if (enkf_node->ecl_write != NULL) { char * node_eclfile = enkf_config_node_alloc_outfile(enkf_node->config , report_step); /* Will return NULL if the node does not have any outfile format. */ /* @@ -320,7 +321,7 @@ void enkf_node_ecl_write(const enkf_node_type *enkf_node , const char *path , fo is then the responsability of the low-level implementation to do "the right thing". */ - enkf_node->ecl_write(enkf_node->data , path , node_eclfile , restart_fortio); + enkf_node->ecl_write(enkf_node->data , path , node_eclfile , filestream); util_safe_free( node_eclfile ); } } @@ -427,25 +428,21 @@ bool enkf_node_forward_load(enkf_node_type *enkf_node , const char * run_path , bool enkf_node_forward_init(enkf_node_type * enkf_node , const char * run_path , int iens) { char * init_file = enkf_config_node_alloc_initfile( enkf_node->config , run_path , iens ); - bool loadOK = false; - if (init_file) { - FUNC_ASSERT(enkf_node->fload); - loadOK = enkf_node->fload( enkf_node->data , init_file ); - } + bool init = enkf_node->initialize(enkf_node->data , iens , init_file, NULL); util_safe_free( init_file ); - return loadOK; + return init; } -bool enkf_node_forward_load_vector(enkf_node_type *enkf_node , const char * run_path , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_block , int report_step1, int report_step2 , int iens ) { +bool enkf_node_forward_load_vector(enkf_node_type *enkf_node , const char * run_path , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_block , const int_vector_type * time_index , int iens ) { bool loadOK; FUNC_ASSERT(enkf_node->forward_load_vector); { - loadOK = enkf_node->forward_load_vector(enkf_node->data , NULL , ecl_sum , restart_block , report_step1 , report_step2); + loadOK = enkf_node->forward_load_vector(enkf_node->data , NULL , ecl_sum , restart_block , time_index); } // This is broken .... - enkf_node->__node_id.report_step = report_step1; + enkf_node->__node_id.report_step = 0;//report_step1; enkf_node->__node_id.state = FORECAST; enkf_node->__node_id.iens = iens; @@ -576,7 +573,7 @@ static void enkf_node_buffer_load( enkf_node_type * enkf_node , enkf_fs_type * f enkf_fs_fread_node( fs , buffer , node_key , var_type , report_step , iens , state ); buffer_fskip_time_t( buffer ); - enkf_node->read_from_buffer(enkf_node->data , buffer , report_step , state ); + enkf_node->read_from_buffer(enkf_node->data , buffer , fs , report_step , state ); buffer_free( buffer ); } } @@ -584,7 +581,7 @@ static void enkf_node_buffer_load( enkf_node_type * enkf_node , enkf_fs_type * f -static void enkf_node_load_vector( enkf_node_type * enkf_node , enkf_fs_type * fs , int iens , state_enum state) { +void enkf_node_load_vector( enkf_node_type * enkf_node , enkf_fs_type * fs , int iens , state_enum state) { if ((enkf_node->__load_state & state) && (enkf_node->__node_id.iens == iens)) return; @@ -908,6 +905,7 @@ void enkf_node_free(enkf_node_type *enkf_node) { if (enkf_node->freef != NULL) enkf_node->freef(enkf_node->data); free(enkf_node->node_key); + vector_free(enkf_node->container_nodes); free(enkf_node); } @@ -1135,26 +1133,54 @@ enkf_node_type * enkf_node_alloc(const enkf_config_node_type * config) { } -static void enkf_node_container_add( enkf_node_type * node , const enkf_node_type * child_node ) { - vector_append_ref( node->container_nodes , child_node ); -} -enkf_node_type * enkf_node_container_alloc(const enkf_config_node_type * config, hash_type * node_hash) { +static void enkf_node_container_add_node( enkf_node_type * node , const enkf_node_type * child_node , bool shared) { + if (shared) + vector_append_ref( node->container_nodes , child_node ); + else + vector_append_owned_ref( node->container_nodes , child_node, enkf_node_free__ ); +} + +static enkf_node_type * enkf_node_alloc_container(const enkf_config_node_type * config, hash_type * node_hash , bool shared) { enkf_node_type * container_node = enkf_node_alloc( config ); { for (int i=0; i < enkf_config_node_container_size( config ); i++) { const enkf_config_node_type * child_config = enkf_config_node_container_iget( config , i ); - enkf_node_type * child_node = hash_get( node_hash , enkf_config_node_get_key( child_config )); + enkf_node_type * child_node; + + if (shared) + child_node = hash_get( node_hash , enkf_config_node_get_key( child_config )); + else + child_node = enkf_node_alloc( child_config ); - enkf_node_container_add( container_node , child_node ); + enkf_node_container_add_node( container_node , child_node , shared); container_add_node( enkf_node_value_ptr( container_node ) , enkf_node_value_ptr( child_node )); } } return container_node; } +enkf_node_type * enkf_node_alloc_shared_container(const enkf_config_node_type * config, hash_type * node_hash) { + return enkf_node_alloc_container( config , node_hash , true ); +} + + +enkf_node_type * enkf_node_alloc_private_container(const enkf_config_node_type * config) { + return enkf_node_alloc_container( config , NULL , false ); +} + +enkf_node_type * enkf_node_deep_alloc(const enkf_config_node_type * config) { + if (enkf_config_node_get_impl_type( config ) == CONTAINER) { + enkf_node_type * container = enkf_node_alloc_container( config , NULL , false ); + container_assert_size( enkf_node_value_ptr( container )); + return container; + } else + return enkf_node_alloc( config ); +} + + bool enkf_node_internalize(const enkf_node_type * node, int report_step) { return enkf_config_node_internalize( node->config , report_step ); diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_obs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_obs.c index 668d03e42b..8030c884e3 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_obs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_obs.c @@ -23,6 +23,7 @@ #include #include #include +#include #include @@ -32,6 +33,7 @@ #include #include #include +#include #include #include #include @@ -186,8 +188,9 @@ struct enkf_obs_struct { /** A hash of obs_vector_types indexed by user provided keys. */ bool have_obs; char * config_file; /* The name of the config file which has been loaded. */ + vector_type * obs_vector; hash_type * obs_hash; - time_t_vector_type * obs_time; /* For fast lookup of report_step -> obs_time */ + time_map_type * obs_time; /* For fast lookup of report_step -> obs_time */ const history_type * history; /* A shared (not owned by enkf_obs) reference to the history object - used when adding HISTORY observations. */ }; @@ -203,7 +206,8 @@ enkf_obs_type * enkf_obs_alloc( ) enkf_obs_type * enkf_obs = util_malloc(sizeof * enkf_obs); enkf_obs->have_obs = false; enkf_obs->obs_hash = hash_alloc(); - enkf_obs->obs_time = time_t_vector_alloc(0 , -1 ); + enkf_obs->obs_vector = vector_alloc_new(); + enkf_obs->obs_time = time_map_alloc(); enkf_obs->history = NULL; enkf_obs->config_file = NULL; @@ -219,7 +223,8 @@ bool enkf_obs_have_obs( const enkf_obs_type * enkf_obs ) { void enkf_obs_free(enkf_obs_type * enkf_obs) { hash_free(enkf_obs->obs_hash); - time_t_vector_free( enkf_obs->obs_time ); + vector_free( enkf_obs->obs_vector ); + time_map_free( enkf_obs->obs_time ); util_safe_free( enkf_obs->config_file ); free(enkf_obs); } @@ -227,17 +232,21 @@ void enkf_obs_free(enkf_obs_type * enkf_obs) { -time_t enkf_obs_iget_obs_time(enkf_obs_type * enkf_obs , int report_step) { - time_t obs_time = time_t_vector_safe_iget( enkf_obs->obs_time , report_step ); - time_t default_time = time_t_vector_get_default( enkf_obs->obs_time ); - if (obs_time == default_time) { - obs_time = history_get_time_t_from_restart_nr( enkf_obs->history , report_step ); - time_t_vector_iset( enkf_obs->obs_time , report_step , obs_time ); - } - return obs_time; +time_t enkf_obs_iget_obs_time(const enkf_obs_type * enkf_obs , int report_step) { + return time_map_iget( enkf_obs->obs_time , report_step ); +} + + +static void enkf_obs_iset_obs_time(enkf_obs_type * enkf_obs , int report_step, time_t obs_time) { + time_map_update( enkf_obs->obs_time , report_step , obs_time); +} + +static int enkf_obs_get_last_restart( const enkf_obs_type * enkf_obs ) { + return time_map_get_size( enkf_obs->obs_time ) - 1; } + /** Observe that the obs_vector can be NULL - in which it is of course not added. */ @@ -248,7 +257,9 @@ void enkf_obs_add_obs_vector(enkf_obs_type * enkf_obs, if (vector != NULL) { if (hash_has_key(enkf_obs->obs_hash , key)) util_abort("%s: Observation with key:%s already added.\n",__func__ , key); - hash_insert_hash_owned_ref(enkf_obs->obs_hash , key , vector , obs_vector_free__); + + hash_insert_ref(enkf_obs->obs_hash , key , vector ); + vector_append_owned_ref( enkf_obs->obs_vector , vector , obs_vector_free__); } } @@ -261,6 +272,14 @@ obs_vector_type * enkf_obs_get_vector(const enkf_obs_type * obs, const char * ke return hash_get(obs->obs_hash , key); } +obs_vector_type * enkf_obs_iget_vector(const enkf_obs_type * obs, int index) { + return vector_iget( obs->obs_vector , index ); +} + +int enkf_obs_get_size( const enkf_obs_type * obs ) { + return vector_get_size( obs->obs_vector ); +} + static void enkf_obs_get_obs_and_measure_summary(const enkf_obs_type * enkf_obs, @@ -269,7 +288,6 @@ static void enkf_obs_get_obs_and_measure_summary(const enkf_obs_type * enkf const local_obsdata_node_type * obs_node , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data, double_vector_type * obs_value , @@ -317,24 +335,15 @@ static void enkf_obs_get_obs_and_measure_summary(const enkf_obs_type * enkf for (i = 0; i < active_count; i++) { for (j=0; j <= i; j++) { double covar = sqrt( double_vector_iget( obs_std , i ) * double_vector_iget( obs_std , j )); - double corr = auto_corrf( (time_t_vector_iget( enkf_obs->obs_time , i ) - time_t_vector_iget( enkf_obs->obs_time , j )) / (24.00 * 3600) , auto_corrf_param ); + double delta_t = enkf_obs_iget_obs_time( enkf_obs , i ) - enkf_obs_iget_obs_time( enkf_obs , j ); + double corr = auto_corrf(delta_t / (24.00 * 3600) , auto_corrf_param ); matrix_iset(error_covar , i , j , covar * corr ); if (i != j) matrix_iset(error_covar , j , i , covar * corr ); } } - { - char * filename = util_alloc_sprintf( "/tmp/covar/%s_%04d-%04d" , obs_vector_get_obs_key( obs_vector ), - obs_tstep_list_iget( tstep_list , 0 ), - obs_tstep_list_get_last( tstep_list )); - FILE * stream = util_mkdir_fopen( filename , "w"); - - matrix_fprintf(error_covar , "%7.3f " , stream ); - fclose( stream ); - free( filename ); - } } @@ -347,7 +356,8 @@ static void enkf_obs_get_obs_and_measure_summary(const enkf_obs_type * enkf { obs_block_type * obs_block = obs_data_add_block( obs_data , obs_vector_get_obs_key( obs_vector ) , active_count , error_covar , true); meas_block_type * meas_block = meas_data_add_block( meas_data, obs_vector_get_obs_key( obs_vector ) , obs_tstep_list_get_last( tstep_list ) , active_count ); - + enkf_node_type * work_node = enkf_node_alloc( obs_vector_get_config_node( obs_vector )); + for (int i=0; i < active_count; i++) obs_block_iset( obs_block , i , double_vector_iget( obs_value , i) , double_vector_iget( obs_std , i )); @@ -357,23 +367,23 @@ static void enkf_obs_get_obs_and_measure_summary(const enkf_obs_type * enkf if (obs_vector_iget_active( obs_vector , step ) && active_list_iget( active_list , 0 /* Index into the scalar summary observation */)) { for (int iens_index = 0; iens_index < int_vector_size( ens_active_list ); iens_index++) { + const int iens = int_vector_iget( ens_active_list , iens_index ); - const char * state_key = obs_vector_get_state_kw(obs_vector); - enkf_node_type * enkf_node = enkf_state_get_node(ensemble[iens] , state_key); node_id_type node_id = {.report_step = step, .iens = iens , .state = state }; - enkf_node_load( enkf_node , fs , node_id ); + enkf_node_load( work_node , fs , node_id ); meas_block_iset(meas_block , iens_index , active_count , - summary_get( enkf_node_value_ptr( enkf_node ) , node_id.report_step , node_id.state )); + summary_get( enkf_node_value_ptr( work_node ) , node_id.report_step , node_id.state )); } active_count++; } } + enkf_node_free( work_node ); } } } @@ -383,7 +393,6 @@ void enkf_obs_get_obs_and_measure_node( const enkf_obs_type * enkf_obs, const local_obsdata_node_type * obs_node , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data) { @@ -400,7 +409,6 @@ void enkf_obs_get_obs_and_measure_node( const enkf_obs_type * enkf_obs, obs_node , state , ens_active_list , - ensemble , meas_data , obs_data , work_value, @@ -411,14 +419,8 @@ void enkf_obs_get_obs_and_measure_node( const enkf_obs_type * enkf_obs, int report_step = obs_tstep_list_iget( tstep_list , i ); if (obs_vector_iget_active(obs_vector , report_step)) { /* The observation is active for this report step. */ const active_list_type * active_list = local_obsdata_node_get_active_list( obs_node ); - obs_vector_iget_observations(obs_vector , report_step , obs_data , active_list); /* Collect the observed data in the obs_data instance. */ - { - /* Could be multithreaded */ - for (int iens_index = 0; iens_index < int_vector_size( ens_active_list ); iens_index++) { - const int iens = int_vector_iget( ens_active_list , iens_index ); - obs_vector_measure(obs_vector , fs , state , report_step , iens_index , ensemble[iens] , meas_data , active_list); - } - } + obs_vector_iget_observations(obs_vector , report_step , obs_data , active_list, fs); /* Collect the observed data in the obs_data instance. */ + obs_vector_measure(obs_vector , fs , state , report_step , ens_active_list , meas_data , active_list); } } } @@ -441,7 +443,6 @@ void enkf_obs_get_obs_and_measure_data(const enkf_obs_type * enkf_obs, const local_obsdata_type * local_obsdata , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data) { @@ -454,7 +455,6 @@ void enkf_obs_get_obs_and_measure_data(const enkf_obs_type * enkf_obs, obs_node , state , ens_active_list , - ensemble , meas_data , obs_data); } @@ -466,7 +466,6 @@ void enkf_obs_get_obs_and_measure(const enkf_obs_type * enkf_obs, const int_vector_type * step_list , state_enum state, const int_vector_type * ens_active_list , - const enkf_state_type ** ensemble , meas_data_type * meas_data, obs_data_type * obs_data, const local_obsset_type * obsset) { @@ -487,7 +486,7 @@ void enkf_obs_get_obs_and_measure(const enkf_obs_type * enkf_obs, } hash_iter_free( iter ); } - enkf_obs_get_obs_and_measure_data(enkf_obs , fs , local_obsdata , state , ens_active_list , ensemble , meas_data , obs_data ); + enkf_obs_get_obs_and_measure_data(enkf_obs , fs , local_obsdata , state , ens_active_list , meas_data , obs_data ); local_obsdata_free( local_obsdata ); } @@ -497,11 +496,20 @@ void enkf_obs_get_obs_and_measure(const enkf_obs_type * enkf_obs, void enkf_obs_reload( enkf_obs_type * enkf_obs , const history_type * history , + time_map_type * external_time_map , const ecl_grid_type * grid , const ecl_sum_type * refcase , double std_cutoff , ensemble_config_type * ensemble_config ) { - enkf_obs_load( enkf_obs , history , enkf_obs->config_file , grid , refcase , std_cutoff , ensemble_config ); + + enkf_obs_load( enkf_obs , + history , + external_time_map , + enkf_obs->config_file , + grid , + refcase , + std_cutoff , + ensemble_config ); } @@ -518,6 +526,7 @@ void enkf_obs_reload( enkf_obs_type * enkf_obs , void enkf_obs_load(enkf_obs_type * enkf_obs , const history_type * history , + time_map_type * external_time_map , const char * config_file, const ecl_grid_type * grid , const ecl_sum_type * refcase , @@ -528,13 +537,35 @@ void enkf_obs_load(enkf_obs_type * enkf_obs , enkf_obs->have_obs = false; } else { enkf_obs->history = history; - if ( enkf_obs->history == NULL) { - fprintf(stderr,"** ERROR: When loading obervations you must provide either REFCASE or a SCHEDULE file.\n"); - fprintf(stderr,"** The observations in obs file:%s will be ignored \n",config_file); - enkf_obs->have_obs = false; - return; - } else { - int last_report = history_get_last_restart( enkf_obs->history ); + + /* Initializing obs_time */ + { + if (enkf_obs->history) { + int last_report = history_get_last_restart( enkf_obs->history ); + int step; + for (step =0; step <= last_report; step++) { + time_t obs_time = history_get_time_t_from_restart_nr( enkf_obs->history , step ); + enkf_obs_iset_obs_time( enkf_obs , step , obs_time ); + } + } else { + if (external_time_map) { + int last_report = time_map_get_size( external_time_map ) - 1; + int step; + for (step =0; step <= last_report; step++) { + time_t obs_time = time_map_iget( external_time_map , step ); + enkf_obs_iset_obs_time( enkf_obs , step , obs_time ); + } + } else { + fprintf(stderr,"** To load observations you must have a REFCASE / SCHEDULE_FILE / TIME_MAP - observations in %s ignored\n", config_file); + return; + } + } + } + + + + { + int last_report = enkf_obs_get_last_restart( enkf_obs ); conf_class_type * enkf_conf_class = enkf_obs_get_obs_conf_class(); conf_instance_type * enkf_conf = conf_instance_alloc_from_file(enkf_conf_class, "enkf_conf", config_file); @@ -545,34 +576,39 @@ void enkf_obs_load(enkf_obs_type * enkf_obs , hash_clear( enkf_obs->obs_hash ); /* will reload even if it is called repeatedly with the */ /* same config_file. */ + /** Handle HISTORY_OBSERVATION instances. */ { stringlist_type * hist_obs_keys = conf_instance_alloc_list_of_sub_instances_of_class_by_name(enkf_conf, "HISTORY_OBSERVATION"); int num_hist_obs = stringlist_get_size(hist_obs_keys); - - for(int hist_obs_nr = 0; hist_obs_nr < num_hist_obs; hist_obs_nr++) { + + for (int hist_obs_nr = 0; hist_obs_nr < num_hist_obs; hist_obs_nr++) { const char * obs_key = stringlist_iget(hist_obs_keys, hist_obs_nr); - const conf_instance_type * hist_obs_conf = conf_instance_get_sub_instance_ref(enkf_conf, obs_key); - obs_vector_type * obs_vector; - enkf_config_node_type * config_node; - - config_node = ensemble_config_add_summary( ensemble_config , obs_key , LOAD_FAIL_WARN ); - if (config_node != NULL) { - obs_vector = obs_vector_alloc( SUMMARY_OBS , obs_key , ensemble_config_get_node( ensemble_config , obs_key ), last_report); - if (obs_vector != NULL) { - if (obs_vector_load_from_HISTORY_OBSERVATION(obs_vector , - hist_obs_conf , - enkf_obs->history , - ensemble_config, - std_cutoff )) - enkf_obs_add_obs_vector(enkf_obs, obs_key, obs_vector); - else { - fprintf(stderr,"** Could not load historical data for observation:%s - ignored\n",obs_key); - obs_vector_free( obs_vector ); + if (enkf_obs->history) { + const conf_instance_type * hist_obs_conf = conf_instance_get_sub_instance_ref(enkf_conf, obs_key); + obs_vector_type * obs_vector; + enkf_config_node_type * config_node; + + config_node = ensemble_config_add_summary( ensemble_config , obs_key , LOAD_FAIL_WARN ); + if (config_node != NULL) { + obs_vector = obs_vector_alloc( SUMMARY_OBS , obs_key , ensemble_config_get_node( ensemble_config , obs_key ), last_report); + if (obs_vector != NULL) { + if (obs_vector_load_from_HISTORY_OBSERVATION(obs_vector , + hist_obs_conf , + enkf_obs->obs_time , + enkf_obs->history , + ensemble_config, + std_cutoff )) + enkf_obs_add_obs_vector(enkf_obs, obs_key, obs_vector); + else { + fprintf(stderr,"** Could not load historical data for observation:%s - ignored\n",obs_key); + obs_vector_free( obs_vector ); + } } - } - } else - fprintf(stderr,"** Warning: summary:%s does not exist - observation:%s not added. \n", obs_key , obs_key); + } else + fprintf(stderr,"** Warning: summary:%s does not exist - observation:%s not added. \n", obs_key , obs_key); + } else + fprintf(stderr,"** Warning: no history object registered - observation:%s is ignored\n",obs_key); } stringlist_free(hist_obs_keys); @@ -597,7 +633,7 @@ void enkf_obs_load(enkf_obs_type * enkf_obs , if (config_node != NULL) { obs_vector = obs_vector_alloc( SUMMARY_OBS , obs_key , ensemble_config_get_node( ensemble_config , sum_key ), last_report); if (obs_vector != NULL) { - obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector , sum_obs_conf , enkf_obs->history , ensemble_config); + obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector , sum_obs_conf , enkf_obs->obs_time , ensemble_config); enkf_obs_add_obs_vector(enkf_obs, obs_key, obs_vector); } } else @@ -616,7 +652,7 @@ void enkf_obs_load(enkf_obs_type * enkf_obs , { const char * obs_key = stringlist_iget(block_obs_keys, block_obs_nr); const conf_instance_type * block_obs_conf = conf_instance_get_sub_instance_ref(enkf_conf, obs_key); - obs_vector_type * obs_vector = obs_vector_alloc_from_BLOCK_OBSERVATION(block_obs_conf , grid , refcase , enkf_obs->history ,ensemble_config); + obs_vector_type * obs_vector = obs_vector_alloc_from_BLOCK_OBSERVATION(block_obs_conf , grid , enkf_obs->obs_time , refcase , ensemble_config); if (obs_vector != NULL) enkf_obs_add_obs_vector(enkf_obs, obs_key, obs_vector); } @@ -634,26 +670,20 @@ void enkf_obs_load(enkf_obs_type * enkf_obs , const char * obs_key = stringlist_iget(block_obs_keys, block_obs_nr); const conf_instance_type * gen_obs_conf = conf_instance_get_sub_instance_ref(enkf_conf, obs_key); - obs_vector_type * obs_vector = obs_vector_alloc_from_GENERAL_OBSERVATION(gen_obs_conf , enkf_obs->history , ensemble_config); + obs_vector_type * obs_vector = obs_vector_alloc_from_GENERAL_OBSERVATION(gen_obs_conf , enkf_obs->obs_time , ensemble_config); if (obs_vector != NULL) enkf_obs_add_obs_vector(enkf_obs, obs_key, obs_vector); } stringlist_free(block_obs_keys); } - /* Initializing obs_time */ - { - int step; - for (step =0; step <= last_report; step++) { - time_t obs_time = history_get_time_t_from_restart_nr( enkf_obs->history , step ); - time_t_vector_iset( enkf_obs->obs_time , step , obs_time ); - } - } conf_instance_free(enkf_conf ); conf_class_free( enkf_conf_class); enkf_obs->config_file = util_realloc_string_copy( enkf_obs->config_file , config_file ); - enkf_obs->have_obs = true; + + if (enkf_obs_get_size( enkf_obs) > 0) + enkf_obs->have_obs = true; } } } @@ -974,32 +1004,35 @@ stringlist_type * enkf_obs_alloc_typed_keylist(enkf_obs_type * enkf_obs , obs_im */ stringlist_type * enkf_obs_alloc_matching_keylist(const enkf_obs_type * enkf_obs , const char * input_string) { - stringlist_type * matching_keys = stringlist_alloc_new(); stringlist_type * obs_keys = hash_alloc_stringlist( enkf_obs->obs_hash ); - char ** input_keys; - int num_keys; - - - util_split_string( input_string , " " , &num_keys , &input_keys); - for (int i=0; i < num_keys; i++) { - bool key_found = false; - const char * input_key = input_keys[i]; - for (int j = 0; j < stringlist_get_size( obs_keys ); j++) { - const char * obs_key = stringlist_iget( obs_keys , j); - - if (util_string_match( obs_key , input_key)) { - if (!stringlist_contains( matching_keys , obs_key )) - stringlist_append_copy( matching_keys , obs_key); - key_found = true; + if (input_string) { + stringlist_type * matching_keys = stringlist_alloc_new(); + char ** input_keys; + int num_keys; + + + util_split_string( input_string , " " , &num_keys , &input_keys); + for (int i=0; i < num_keys; i++) { + bool key_found = false; + + const char * input_key = input_keys[i]; + for (int j = 0; j < stringlist_get_size( obs_keys ); j++) { + const char * obs_key = stringlist_iget( obs_keys , j); + + if (util_string_match( obs_key , input_key)) { + if (!stringlist_contains( matching_keys , obs_key )) + stringlist_append_copy( matching_keys , obs_key); + key_found = true; + } } } + util_free_stringlist( input_keys , num_keys ); + stringlist_free( obs_keys ); + return matching_keys; + } else { + return obs_keys; } - - - util_free_stringlist( input_keys , num_keys ); - stringlist_free( obs_keys ); - return matching_keys; } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_data.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_data.c index 283be86054..33d4663ebb 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_data.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_data.c @@ -133,7 +133,6 @@ void enkf_plot_data_load( enkf_plot_data_type * plot_data , thread_pool_type * tp = thread_pool_alloc( num_cpu , true ); for (int iens = 0; iens < ens_size ; iens++) { if (bool_vector_iget( mask , iens)) { - // thread_pool here? enkf_plot_tvector_type * vector = enkf_plot_data_iget( plot_data , iens ); arg_pack_type * work_arg = plot_data->work_arg[iens]; diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw.c new file mode 100644 index 0000000000..e97d0e48ba --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw.c @@ -0,0 +1,148 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include + +#include +#include +#include + +#include +#include +#include +#include +#include + + +#define ENKF_PLOT_GEN_KW_TYPE_ID 88362063 + +struct enkf_plot_gen_kw_struct { + UTIL_TYPE_ID_DECLARATION; + const enkf_config_node_type * config_node; + int size; /* Number of ensembles. */ + enkf_plot_gen_kw_vector_type ** ensemble; /* One vector for each ensemble. */ +}; + + +UTIL_IS_INSTANCE_FUNCTION( enkf_plot_gen_kw , ENKF_PLOT_GEN_KW_TYPE_ID ) + + +enkf_plot_gen_kw_type * enkf_plot_gen_kw_alloc( const enkf_config_node_type * config_node ) { + if (enkf_config_node_get_impl_type( config_node ) == GEN_KW) { + enkf_plot_gen_kw_type * plot_gen_kw = util_malloc( sizeof * plot_gen_kw ); + UTIL_TYPE_ID_INIT( plot_gen_kw , ENKF_PLOT_GEN_KW_TYPE_ID ); + plot_gen_kw->config_node = config_node; + plot_gen_kw->size = 0; + plot_gen_kw->ensemble = NULL; + return plot_gen_kw; + } + else { + return NULL; + } +} + + +void enkf_plot_gen_kw_free( enkf_plot_gen_kw_type * plot_gen_kw ) { + int iens; + for (iens = 0 ; iens < plot_gen_kw->size ; ++iens) { + enkf_plot_gen_kw_vector_free( plot_gen_kw->ensemble[iens] ); + } + free( plot_gen_kw ); +} + + +int enkf_plot_gen_kw_get_size( const enkf_plot_gen_kw_type * plot_gen_kw ) { + return plot_gen_kw->size; +} + +enkf_plot_gen_kw_vector_type * enkf_plot_gen_kw_iget( const enkf_plot_gen_kw_type * plot_gen_kw , int iens) { + if ((iens < 0) || (iens >= plot_gen_kw->size)) + util_abort("%s: index:%d invalid. Valid interval: [0,%d>.\n",__func__ , iens , plot_gen_kw->size); + + return plot_gen_kw->ensemble[iens]; +} + + +static void enkf_plot_gen_kw_resize( enkf_plot_gen_kw_type * plot_gen_kw , int new_size ) { + if (new_size != plot_gen_kw->size) { + int iens; + + if (new_size < plot_gen_kw->size) { + for (iens = new_size; iens < plot_gen_kw->size; iens++) { + enkf_plot_gen_kw_vector_free( plot_gen_kw->ensemble[iens] ); + } + } + + plot_gen_kw->ensemble = util_realloc( plot_gen_kw->ensemble , new_size * sizeof * plot_gen_kw->ensemble); + + if (new_size > plot_gen_kw->size) { + for (iens = plot_gen_kw->size; iens < new_size; iens++) { + plot_gen_kw->ensemble[iens] = enkf_plot_gen_kw_vector_alloc( plot_gen_kw->config_node , iens ); + } + } + plot_gen_kw->size = new_size; + } +} + + + +void enkf_plot_gen_kw_load( enkf_plot_gen_kw_type * plot_gen_kw, + enkf_fs_type * fs, + bool transform_data , + int report_step, + state_enum state, + const bool_vector_type * input_mask ) { + + state_map_type * state_map = enkf_fs_get_state_map( fs ); + int ens_size = state_map_get_size( state_map ); + bool_vector_type * mask; + + if (input_mask) + mask = bool_vector_alloc_copy( input_mask ); + else + mask = bool_vector_alloc( ens_size , true ); + + enkf_plot_gen_kw_resize( plot_gen_kw , ens_size ); + { + int iens; + for (iens = 0; iens < ens_size; ++iens) { + if (bool_vector_iget( mask , iens)) { + enkf_plot_gen_kw_vector_type * vector = enkf_plot_gen_kw_iget( plot_gen_kw , iens ); + enkf_plot_gen_kw_vector_load( vector , fs , transform_data , report_step , state ); + } + } + } +} + + + +const char * enkf_plot_gen_kw_iget_key( const enkf_plot_gen_kw_type * plot_gen_kw, int index) { + const gen_kw_config_type * gen_kw_config = enkf_config_node_get_ref( plot_gen_kw->config_node ); + return gen_kw_config_iget_name( gen_kw_config , index ); +} + +int enkf_plot_gen_kw_get_keyword_count( const enkf_plot_gen_kw_type * gen_kw ){ + const gen_kw_config_type * gen_kw_config = enkf_config_node_get_ref( gen_kw->config_node ); + return gen_kw_config_get_data_size(gen_kw_config); +} + +bool enkf_plot_gen_kw_should_use_log_scale(const enkf_plot_gen_kw_type * gen_kw , int index) { + const gen_kw_config_type * gen_kw_config = enkf_config_node_get_ref( gen_kw->config_node ); + return gen_kw_config_should_use_log_scale(gen_kw_config, index); +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw_vector.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw_vector.c new file mode 100644 index 0000000000..87161ce3ae --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gen_kw_vector.c @@ -0,0 +1,97 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw_vector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include +#include +#include +#include + +#include +#include +#include +#include + + +#define ENKF_PLOT_GEN_KW_VECTOR_TYPE_ID 88362064 + +struct enkf_plot_gen_kw_vector_struct { + UTIL_TYPE_ID_DECLARATION; + int iens; + double_vector_type * data; + const enkf_config_node_type * config_node; +}; + + +UTIL_IS_INSTANCE_FUNCTION( enkf_plot_gen_kw_vector , ENKF_PLOT_GEN_KW_VECTOR_TYPE_ID ) + + +enkf_plot_gen_kw_vector_type * enkf_plot_gen_kw_vector_alloc( const enkf_config_node_type * config_node , int iens ) { + enkf_plot_gen_kw_vector_type * vector = util_malloc( sizeof * vector ); + UTIL_TYPE_ID_INIT( vector , ENKF_PLOT_GEN_KW_VECTOR_TYPE_ID ); + vector->config_node = config_node; + vector->data = double_vector_alloc(0,0); + vector->iens = iens; + return vector; +} + + +void enkf_plot_gen_kw_vector_free( enkf_plot_gen_kw_vector_type * vector ) { + double_vector_free( vector->data ); + free( vector ); +} + + +int enkf_plot_gen_kw_vector_get_size( const enkf_plot_gen_kw_vector_type * vector ) { + return double_vector_size( vector->data ); +} + +double enkf_plot_gen_kw_vector_iget( const enkf_plot_gen_kw_vector_type * vector , int index ) { + return double_vector_iget( vector->data , index ); +} + + +void enkf_plot_gen_kw_vector_reset( enkf_plot_gen_kw_vector_type * vector ) { + double_vector_reset( vector->data ); +} + + +void enkf_plot_gen_kw_vector_load( enkf_plot_gen_kw_vector_type * vector , enkf_fs_type * fs , bool transform_data , int report_step , state_enum state ) { + enkf_plot_gen_kw_vector_reset( vector ); + { + node_id_type node_id = { .report_step = report_step , + .state = state , + .iens = vector->iens }; + + enkf_node_type * data_node = enkf_node_alloc( vector->config_node ); + + if (enkf_node_try_load( data_node , fs , node_id )) { + gen_kw_type * gen_kw = enkf_node_value_ptr( data_node ); + int n_kw = gen_kw_data_size( gen_kw ); + int i_kw; + + for (i_kw = 0 ; i_kw < n_kw ; ++i_kw) { + double_vector_append(vector->data , gen_kw_data_iget( gen_kw , i_kw , transform_data ) ); + } + } + + enkf_node_free( data_node ); + } +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gendata.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gendata.c new file mode 100644 index 0000000000..5d259a82c2 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_gendata.c @@ -0,0 +1,205 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gendata.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include + + +#include +#include +#include +#include + +#include +#include +#include +#include + + +#define ENKF_PLOT_GENDATA_TYPE_ID 377626666 + +struct enkf_plot_gendata_struct { + UTIL_TYPE_ID_DECLARATION; + int size; + const enkf_config_node_type * enkf_config_node; + enkf_plot_genvector_type ** ensemble; + arg_pack_type ** work_arg; + double_vector_type * max_values; + double_vector_type * min_values; +}; + +UTIL_IS_INSTANCE_FUNCTION( enkf_plot_gendata , ENKF_PLOT_GENDATA_TYPE_ID ) + +enkf_plot_gendata_type * enkf_plot_gendata_alloc( const enkf_config_node_type * enkf_config_node ) { + if (enkf_config_node_get_impl_type(enkf_config_node) == GEN_DATA ){ + enkf_plot_gendata_type * data = util_malloc(sizeof * data); + UTIL_TYPE_ID_INIT (data , ENKF_PLOT_GENDATA_TYPE_ID); + data->size = 0; + data->enkf_config_node = enkf_config_node; + data->work_arg = NULL; + data->ensemble = NULL; + + data->max_values = NULL; + data->min_values = NULL; + return data; + } else { + return NULL; + } + +} + + +enkf_plot_gendata_type * enkf_plot_gendata_alloc_from_obs_vector( const obs_vector_type * obs_vector ){ + return enkf_plot_gendata_alloc(obs_vector_get_config_node(obs_vector)); +} + +void enkf_plot_gendata_free( enkf_plot_gendata_type * data ){ + for (int iens = 0; iens < data->size; iens++) { + arg_pack_free( data->work_arg[iens] ); + enkf_plot_genvector_free( data->ensemble[iens] ); + } + + free( data->work_arg ); + free( data->ensemble ); + free( data ); + +} + +int enkf_plot_gendata_get_size( const enkf_plot_gendata_type * data ){ + return data->size; +} + +enkf_plot_genvector_type * enkf_plot_gendata_iget( const enkf_plot_gendata_type * plot_data , int index){ + if(index >=0 && index < plot_data->size){ + return plot_data->ensemble[index]; + } else { + return NULL; + } +} + +static void enkf_plot_gendata_resize( enkf_plot_gendata_type * plot_gendata , int new_size ){ + if (new_size != plot_gendata->size) { + int iens; + + if (new_size < plot_gendata->size) { + for (iens = new_size; iens < plot_gendata->size; iens++) { + enkf_plot_genvector_free( plot_gendata->ensemble[iens] ); + arg_pack_free( plot_gendata->work_arg[iens] ); + } + } + + plot_gendata->ensemble = util_realloc( plot_gendata->ensemble , new_size * sizeof * plot_gendata->ensemble); + plot_gendata->work_arg = util_realloc( plot_gendata->work_arg , new_size * sizeof * plot_gendata->work_arg); + + if (new_size > plot_gendata->size) { + for (iens = plot_gendata->size; iens < new_size; iens++) { + plot_gendata->ensemble[iens] = enkf_plot_genvector_alloc( plot_gendata->enkf_config_node , iens ); + plot_gendata->work_arg[iens] = arg_pack_alloc(); + } + } + plot_gendata->size = new_size; + } +} + +static void enkf_plot_gendata_reset( enkf_plot_gendata_type * plot_gendata , int report_step){ + int iens; + for (iens = 0; iens < plot_gendata->size; iens++){ + arg_pack_clear( plot_gendata->work_arg[iens] ); + } +} + + + +void enkf_plot_gendata_load( enkf_plot_gendata_type * plot_data , + enkf_fs_type * fs , + int report_step , + state_enum state , + const bool_vector_type * input_mask){ + + state_map_type * state_map = enkf_fs_get_state_map( fs ); + int ens_size = state_map_get_size( state_map ); + bool_vector_type * mask; + + if (input_mask) + mask = bool_vector_alloc_copy( input_mask ); + else + mask = bool_vector_alloc( ens_size , false ); + + state_map_select_matching( state_map , mask , STATE_HAS_DATA ); + + enkf_plot_gendata_resize( plot_data , ens_size ); + enkf_plot_gendata_reset( plot_data , report_step ); + + { + const int num_cpu = 4; + thread_pool_type * tp = thread_pool_alloc( num_cpu , true ); + for (int iens = 0; iens < ens_size ; iens++) { + if (bool_vector_iget( mask , iens)) { + enkf_plot_genvector_type * vector = enkf_plot_gendata_iget( plot_data , iens ); + arg_pack_type * work_arg = plot_data->work_arg[iens]; + + arg_pack_append_ptr( work_arg , vector ); + arg_pack_append_ptr( work_arg , fs ); + arg_pack_append_int( work_arg , report_step); + arg_pack_append_int( work_arg , state ); + + thread_pool_add_job( tp , enkf_plot_genvector_load__ , work_arg ); + } + } + thread_pool_join( tp ); + thread_pool_free( tp ); + } + + bool_vector_free( mask ); + +} + +void enkf_plot_gendata_find_min_max_values__(enkf_plot_gendata_type * plot_data){ + for (int iens = 0; iens < plot_data->size; iens++){ + enkf_plot_genvector_type * vector = enkf_plot_gendata_iget(plot_data, iens); + int size = enkf_plot_genvector_get_size(vector); + if(iens == 0) { + plot_data->min_values = double_vector_alloc(size, DBL_MAX); + plot_data->max_values = double_vector_alloc(size, -DBL_MAX); + } + for(int index = 0; index < size; index++){ + double value = enkf_plot_genvector_iget(vector, index); + double_vector_iset(plot_data->min_values, index, util_double_min(double_vector_iget(plot_data->min_values, index), value)); + double_vector_iset(plot_data->max_values, index, util_double_max(double_vector_iget(plot_data->max_values, index), value)); + } + } +} + +double_vector_type * enkf_plot_gendata_get_min_values(enkf_plot_gendata_type * plot_data) { + if(plot_data->min_values == NULL) { + enkf_plot_gendata_find_min_max_values__(plot_data); + } + return plot_data->min_values; +} + + + +double_vector_type * enkf_plot_gendata_get_max_values(enkf_plot_gendata_type * plot_data) { + if(plot_data->max_values == NULL) { + enkf_plot_gendata_find_min_max_values__(plot_data); + } + return plot_data->max_values; +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_genvector.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_genvector.c new file mode 100644 index 0000000000..60e97dbf51 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_genvector.c @@ -0,0 +1,97 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_genvector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include + + +#include +#include +#include + +#include +#include +#include +#include +#include +#include + +#define ENKF_PLOT_GENVECTOR_TYPE_ID 66862669 + +struct enkf_plot_genvector_struct { + UTIL_TYPE_ID_DECLARATION; + int iens; + double_vector_type * data; + const enkf_config_node_type * config_node; +}; + +UTIL_IS_INSTANCE_FUNCTION( enkf_plot_genvector , ENKF_PLOT_GENVECTOR_TYPE_ID ) + +enkf_plot_genvector_type * enkf_plot_genvector_alloc( const enkf_config_node_type * config_node , int iens){ + enkf_plot_genvector_type * vector = util_malloc( sizeof * vector ); + UTIL_TYPE_ID_INIT( vector , ENKF_PLOT_GENVECTOR_TYPE_ID ); + vector->config_node = config_node; + vector->data = double_vector_alloc(0,0); + vector->iens = iens; + return vector; + +} + +void enkf_plot_genvector_free( enkf_plot_genvector_type * vector ){ + double_vector_free(vector->data); + free(vector); +} + +int enkf_plot_genvector_get_size( const enkf_plot_genvector_type * vector ){ + return double_vector_size( vector->data ); +} + + +double enkf_plot_genvector_iget( const enkf_plot_genvector_type * vector , int index){ + return double_vector_iget( vector->data , index ); +} + + +void enkf_plot_genvector_load( enkf_plot_genvector_type * vector , enkf_fs_type * fs , int report_step , state_enum state) { + enkf_node_type * work_node = enkf_node_alloc( vector->config_node ); + + node_id_type node_id = { .report_step = report_step , + .state = state , + .iens = vector->iens }; + + if (enkf_node_try_load( work_node , fs , node_id )) { + gen_data_type * node = enkf_node_value_ptr( work_node ); + gen_data_copy_to_double_vector( node , vector->data ); + + } + enkf_node_free( work_node ); +} + + +void * enkf_plot_genvector_load__( void * arg ){ + arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + enkf_plot_genvector_type * vector = arg_pack_iget_ptr( arg_pack , 0); + enkf_fs_type * fs = arg_pack_iget_ptr( arg_pack , 1 ); + int report_step = arg_pack_iget_int( arg_pack , 2 ); + state_enum state = arg_pack_iget_int( arg_pack , 3 ); + + enkf_plot_genvector_load( vector , fs , report_step , state ); + return NULL; + +} diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_tvector.c b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_tvector.c index 1a7a7d0807..8bdc264cbb 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_plot_tvector.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_plot_tvector.c @@ -140,12 +140,15 @@ void enkf_plot_tvector_load( enkf_plot_tvector_type * plot_tvector , enkf_node_type * work_node = enkf_node_alloc( plot_tvector->config_node ); if (enkf_node_vector_storage( work_node )) { - enkf_node_user_get_vector(work_node , fs , index_key , plot_tvector->iens , state , plot_tvector->work); - for (int step = 0; step < time_map_get_size(time_map); step++) - enkf_plot_tvector_iset( plot_tvector , - step , - time_map_iget( time_map , step ) , - double_vector_iget( plot_tvector->work , step )); + bool has_data = enkf_node_user_get_vector(work_node , fs , index_key , plot_tvector->iens , state , plot_tvector->work); + + if(has_data) { + for (int step = 0; step < time_map_get_size(time_map); step++) + enkf_plot_tvector_iset( plot_tvector , + step , + time_map_iget( time_map , step ) , + double_vector_iget( plot_tvector->work , step )); + } } else { int step; node_id_type node_id = {.iens = plot_tvector->iens, diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_state.c b/ThirdParty/Ert/devel/libenkf/src/enkf_state.c index 800d82ef7d..7fa1bd3e44 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_state.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_state.c @@ -34,7 +34,6 @@ #include #include #include -#include #include #include #include @@ -62,6 +61,7 @@ #include #include #include +#include #include #include #include @@ -71,6 +71,7 @@ #include #include #include +#include #define ENKF_STATE_TYPE_ID 78132 @@ -95,7 +96,8 @@ typedef struct run_info_struct { int num_internal_submit; int load_start; /* When loading back results - start at this step. */ int step1; /* The forward model is integrated: step1 -> step2 */ - int step2; + int step2; + int iter; char * run_path; /* The currently used runpath - is realloced / freed for every step. */ run_mode_type run_mode; /* What type of run this is */ int queue_index; /* The job will in general have a different index in the queue than the iens number. */ @@ -124,7 +126,6 @@ typedef struct shared_info_struct { ext_joblist_type * joblist; /* The list of external jobs which are installed - and *how* they should be run (with Python code) */ job_queue_type * job_queue; /* The queue handling external jobs. (i.e. LSF / TORQUE / rsh / local / ... )*/ const site_config_type * site_config; - log_type * logh; /* The log handle. */ ert_templates_type * templates; const ecl_config_type * ecl_config; } shared_info_type; @@ -157,9 +158,9 @@ struct enkf_state_struct { static void run_info_set_run_path(run_info_type * run_info , int iens , path_fmt_type * run_path_fmt, const subst_list_type * state_subst_list) { util_safe_free(run_info->run_path); { - char * tmp1 = path_fmt_alloc_path(run_path_fmt , false , iens , run_info->step1 , run_info->step2); /* 1: Replace the %d with iens */ - char * tmp2 = subst_list_alloc_filtered_string( state_subst_list , tmp1 ); /* 2: Filter out various magic strings like and . */ - run_info->run_path = util_alloc_abs_path( tmp2 ); /* 3: Ensure that the path is absolute. */ + char * tmp1 = path_fmt_alloc_path(run_path_fmt , false , iens, run_info->iter); /* 1: Replace first %d with iens, if a second %d replace with iter */ + char * tmp2 = subst_list_alloc_filtered_string( state_subst_list , tmp1 ); /* 2: Filter out various magic strings like and . */ + run_info->run_path = util_alloc_abs_path( tmp2 ); /* 3: Ensure that the path is absolute. */ free( tmp1 ); free( tmp2 ); } @@ -191,15 +192,18 @@ static void run_info_init_for_load(run_info_type * run_info , int step1, int step2, int iens, + int iter , path_fmt_type * run_path_fmt , const subst_list_type * state_subst_list) { run_info->step1 = step1; run_info->step2 = step2; run_info->load_start = load_start; + run_info->iter = iter; run_info_set_run_path(run_info , iens , run_path_fmt , state_subst_list ); } + static void run_info_set(run_info_type * run_info , run_mode_type run_mode , bool active , @@ -209,7 +213,8 @@ static void run_info_set(run_info_type * run_info , state_enum init_state_dynamic , int load_start , int step1 , - int step2 , + int step2 , + int iter , int iens , path_fmt_type * run_path_fmt , const subst_list_type * state_subst_list) { @@ -223,7 +228,7 @@ static void run_info_set(run_info_type * run_info , run_info->run_mode = run_mode; run_info->max_internal_submit = max_internal_submit; run_info->num_internal_submit = 0; - run_info_init_for_load( run_info , load_start , step1 , step2 , iens , run_path_fmt , state_subst_list); + run_info_init_for_load( run_info , load_start , step1 , step2 , iens , iter , run_path_fmt , state_subst_list); } @@ -250,14 +255,13 @@ static void run_info_complete_run(run_info_type * run_info) { /*****************************************************************/ -static shared_info_type * shared_info_alloc(const site_config_type * site_config , model_config_type * model_config, const ecl_config_type * ecl_config , log_type * logh , ert_templates_type * templates) { +static shared_info_type * shared_info_alloc(const site_config_type * site_config , model_config_type * model_config, const ecl_config_type * ecl_config , ert_templates_type * templates) { shared_info_type * shared_info = util_malloc(sizeof * shared_info ); shared_info->joblist = site_config_get_installed_jobs( site_config ); shared_info->job_queue = site_config_get_job_queue( site_config ); shared_info->site_config = site_config; shared_info->model_config = model_config; - shared_info->logh = logh; shared_info->templates = templates; shared_info->ecl_config = ecl_config; return shared_info; @@ -290,17 +294,16 @@ void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs , co else { state_enum init_state = ANALYZED; - for (int ip = 0; ip < stringlist_get_size(param_list); ip++) - { - enkf_node_type * param_node = enkf_state_get_node(enkf_state, stringlist_iget(param_list, ip)); - node_id_type node_id = { .report_step = 0, .iens = iens, .state = init_state }; - bool has_data = enkf_node_has_data(param_node, fs, node_id); - - if ((init_mode == INIT_FORCE) || (has_data == false) || (current_state == STATE_LOAD_FAILURE)) { - if (enkf_node_initialize(param_node, iens, enkf_state->rng)) - enkf_node_store(param_node, fs, true, node_id); - } + for (int ip = 0; ip < stringlist_get_size(param_list); ip++) { + enkf_node_type * param_node = enkf_state_get_node(enkf_state, stringlist_iget(param_list, ip)); + node_id_type node_id = { .report_step = 0, .iens = iens, .state = init_state }; + bool has_data = enkf_node_has_data(param_node, fs, node_id); + + if ((init_mode == INIT_FORCE) || (has_data == false) || (current_state == STATE_LOAD_FAILURE)) { + if (enkf_node_initialize(param_node, iens, enkf_state->rng)) + enkf_node_store(param_node, fs, true, node_id); } + } state_map_update_matching(state_map , iens , STATE_UNDEFINED | STATE_LOAD_FAILURE , STATE_INITIALIZED); enkf_fs_fsync(fs); } @@ -464,7 +467,7 @@ enkf_state_type * enkf_state_alloc(int iens, ensemble_config_type * ensemble_config, const site_config_type * site_config, const ecl_config_type * ecl_config, - log_type * logh, + ert_templates_type * templates, subst_list_type * subst_parent) { @@ -472,7 +475,7 @@ enkf_state_type * enkf_state_alloc(int iens, UTIL_TYPE_ID_INIT( enkf_state , ENKF_STATE_TYPE_ID ); enkf_state->ensemble_config = ensemble_config; - enkf_state->shared_info = shared_info_alloc(site_config , model_config , ecl_config , logh, templates); + enkf_state->shared_info = shared_info_alloc(site_config , model_config , ecl_config , templates); enkf_state->run_info = run_info_alloc(); enkf_state->node_hash = hash_alloc(); @@ -567,9 +570,8 @@ void enkf_state_add_node(enkf_state_type * enkf_state , const char * node_key , { enkf_node_type *enkf_node; if (enkf_config_node_get_impl_type( config ) == CONTAINER) - enkf_node = enkf_node_container_alloc( config , enkf_state->node_hash ); + enkf_node = enkf_node_alloc_shared_container( config , enkf_state->node_hash ); else - enkf_node = enkf_node_alloc( config ); hash_insert_hash_owned_ref(enkf_state->node_hash , node_key , enkf_node, enkf_node_free__); @@ -681,11 +683,13 @@ static ecl_sum_type * enkf_state_load_ecl_sum(const enkf_state_type * enkf_state static void enkf_state_log_GEN_DATA_load( const enkf_node_type * enkf_node , int report_step , stringlist_type * msg_list) { /* In interactive mode we explicitly report the loads of GEN_DATA instances. */ char * load_file = enkf_config_node_alloc_infile(enkf_node_get_config( enkf_node ) , report_step); + int data_size = gen_data_get_size( enkf_node_value_ptr( enkf_node )); stringlist_append_owned_ref( msg_list , - util_alloc_sprintf("Loaded GEN_DATA:%s instance for step:%d from file:%s" , + util_alloc_sprintf("Loaded GEN_DATA:%s instance for step:%d from file:%s size:%d" , enkf_node_get_key( enkf_node ) , report_step , - load_file )); + load_file , + data_size)); free( load_file ); } @@ -718,16 +722,32 @@ static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enk ecl_sum_type * summary = enkf_state_load_ecl_sum( enkf_state , msg_list , result ); /** OK - now we have actually loaded the ecl_sum instance, or ecl_sum == NULL. */ if (summary != NULL) { - + int_vector_type * time_index; + { + time_map_type * time_map = enkf_fs_get_time_map( fs ); + time_map_summary_update( time_map , summary ); + time_index = time_map_alloc_index_map( time_map , summary ); + } + + /* + Now there are two related / conflicting(?) systems for + checking summary time consistency, both internally in the + time_map and also through the + enkf_state_report_step_compatible() function. + */ + /*Check the loaded summary against the reference ecl_sum_type */ if (!enkf_state_report_step_compatible(enkf_state, summary)) *result |= REPORT_STEP_INCOMPATIBLE; - + + /* The actual loading internalizing - from ecl_sum -> enkf_node. */ - const shared_info_type * shared_info = enkf_state->shared_info; - const int iens = member_config_get_iens( enkf_state->my_config ); - const int step2 = ecl_sum_get_last_report_step( summary ); /* Step2 is just taken from the number of steps found in the summary file. */ + const int iens = member_config_get_iens( enkf_state->my_config ); + const int step2 = ecl_sum_get_last_report_step( summary ); /* Step2 is just taken from the number of steps found in the summary file. */ + + int_vector_iset_block( time_index , 0 , load_start , -1 ); + int_vector_resize( time_index , step2 + 1); { hash_iter_type * iter = hash_iter_alloc( enkf_state->node_hash ); @@ -737,11 +757,11 @@ static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enk enkf_node_get_impl_type(node) == SUMMARY) { { enkf_node_try_load_vector( node , fs , iens , FORECAST ); // Ensure that what is currently on file is loaded before we update. - if (enkf_node_forward_load_vector( node , run_info->run_path , summary , NULL , load_start, step2 , iens)) + if (enkf_node_forward_load_vector( node , run_info->run_path , summary , NULL , time_index , iens)) enkf_node_store_vector( node , fs , iens , FORECAST ); else { *result |= LOAD_FAILURE; - log_add_fmt_message(shared_info->logh , 3 , NULL , "[%03d:----] Failed to load data for vector node:%s.",iens , enkf_node_get_key( node )); + ert_log_add_fmt_message( 3 , NULL , "[%03d:----] Failed to load data for vector node:%s.",iens , enkf_node_get_key( node )); if (interactive) stringlist_append_owned_ref( msg_list , util_alloc_sprintf("Failed to load vector:%s" , enkf_node_get_key( node ))); } @@ -751,11 +771,8 @@ static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enk hash_iter_free(iter); } - { - time_map_type * time_map = enkf_fs_get_time_map( fs ); - time_map_summary_update_strict( time_map , summary ); - } ecl_sum_free( summary ); + int_vector_free( time_index ); return true; } else { fprintf(stderr , "** Warning: could not load ECLIPSE summary data from %s - this will probably fail later ...\n" , enkf_state->run_info->run_path); @@ -805,7 +822,6 @@ static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , stringlist_type * msg_list) { { run_info_type * run_info = enkf_state->run_info; - shared_info_type * shared_info = enkf_state->shared_info; member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); stringlist_type * keylist_GEN_DATA = ensemble_config_alloc_keylist_from_impl_type(enkf_state->ensemble_config , GEN_DATA ); @@ -815,26 +831,30 @@ static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , if (enkf_node_vector_storage(node)) { + util_abort("%s: holy shit - vector storage not correctly implemented for GEN_DATA\n",__func__); enkf_node_try_load_vector( node , fs , iens , FORECAST); - if (enkf_node_forward_load_vector( node , run_info->run_path , NULL , NULL , load_start, last_report , iens)) { + if (enkf_node_forward_load_vector( node , run_info->run_path , NULL , NULL , NULL , iens)) { enkf_node_store_vector( node , fs , iens , FORECAST ); if (interactive) enkf_state_log_GEN_DATA_load( node , 0 , msg_list ); } else { *result |= LOAD_FAILURE; - log_add_fmt_message(shared_info->logh , 3 , NULL , "[%03d:----] Failed to load data for vector node:%s.",iens , enkf_node_get_key( node )); + ert_log_add_fmt_message(3 , NULL , "[%03d:----] Failed to load data for vector node:%s.",iens , enkf_node_get_key( node )); if (interactive) stringlist_append_owned_ref( msg_list , util_alloc_sprintf("Failed to load vector:%s" , enkf_node_get_key( node ))); } } else { - + for (int report_step = load_start; report_step <= last_report; report_step++) { if (enkf_node_internalize(node , report_step)) { - + if (enkf_node_has_func(node , forward_load_func)) { if (enkf_node_forward_load(node , run_info->run_path , NULL , NULL , report_step , iens )) { - node_id_type node_id = {.report_step = report_step , .iens = iens , .state = FORECAST }; + node_id_type node_id = {.report_step = report_step , + .iens = iens , + .state = FORECAST }; + enkf_node_store( node , fs, false , node_id ); if (interactive) @@ -842,7 +862,7 @@ static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , } else { *result |= LOAD_FAILURE; - log_add_fmt_message(shared_info->logh , 1 , NULL , "[%03d:%04d] Failed load data for node:%s.",iens , report_step , enkf_node_get_key( node )); + ert_log_add_fmt_message(1 , stderr , "[%03d:%04d] Failed load data for node:%s.",iens , report_step , enkf_node_get_key( node )); if (interactive) stringlist_append_owned_ref(msg_list , @@ -1043,7 +1063,7 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , enkf_node_store( enkf_node , fs, store_vectors , node_id ); } else { *result |= LOAD_FAILURE; - log_add_fmt_message(shared_info->logh , 1 , NULL , "[%03d:%04d] Failed load data for node:%s.",iens , report_step , enkf_node_get_key( enkf_node )); + ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d] Failed load data for node:%s.",iens , report_step , enkf_node_get_key( enkf_node )); if (interactive) stringlist_append_owned_ref(msg_list , util_alloc_sprintf("Failed to load: %s at step:%d" , enkf_node_get_key( enkf_node ) , report_step)); @@ -1085,7 +1105,6 @@ static void enkf_state_internalize_results(enkf_state_type * enkf_state , enkf_f hence we must load the summary results first. */ - enkf_state_internalize_dynamic_eclipse_results(enkf_state , fs , model_config , result, interactive , msg_list); { int last_report = time_map_get_last_step( enkf_fs_get_time_map( fs )); @@ -1136,8 +1155,17 @@ void enkf_state_forward_init(enkf_state_type * enkf_state , if (!enkf_node_has_data( node , fs , node_id)) { if (enkf_node_forward_init(node , run_info->run_path , iens )) enkf_node_store( node , fs, false , node_id ); - else + else { + char * init_file = enkf_config_node_alloc_initfile( enkf_node_get_config( node ) , run_info->run_path , iens ); + + if (init_file && !util_file_exists( init_file )) + fprintf(stderr,"File not found: %s - failed to initialize node: %s\n", init_file , enkf_node_get_key( node )); + else + fprintf(stderr,"Failed to initialize node: %s\n", enkf_node_get_key( node )); + + util_safe_free( init_file ); *result |= LOAD_FAILURE; + } } } @@ -1183,23 +1211,29 @@ void * enkf_state_load_from_forward_model_mt( void * arg ) { int step1 = arg_pack_iget_int( arg_pack , 3 ); int step2 = arg_pack_iget_int( arg_pack , 4 ); bool interactive = arg_pack_iget_bool( arg_pack , 5 ); - stringlist_type * msg_list = arg_pack_iget_ptr( arg_pack , 6 ); + stringlist_type * msg_list = arg_pack_iget_ptr( arg_pack , 6 ); + bool manual_load = arg_pack_iget_bool( arg_pack , 7 ); int iens = member_config_get_iens( enkf_state->my_config ); - int result = 0; + int iter = arg_pack_iget_int( arg_pack , 8 ); + int * result = arg_pack_iget_ptr( arg_pack , 9 ); + if (manual_load) + state_map_update_undefined(enkf_fs_get_state_map(fs) , iens , STATE_INITIALIZED); + run_info_init_for_load( enkf_state->run_info , load_start , step1 , step2 , iens , + iter , model_config_get_runpath_fmt( enkf_state->shared_info->model_config ) , enkf_state->subst_list ); - enkf_state_load_from_forward_model( enkf_state , fs , &result , interactive , msg_list ); - if (result & REPORT_STEP_INCOMPATIBLE) { + enkf_state_load_from_forward_model( enkf_state , fs , result , interactive , msg_list ); + if (*result & REPORT_STEP_INCOMPATIBLE) { // If refcase has been used for observations: crash and burn. fprintf(stderr,"** Warning the timesteps in refcase and current simulation are not in accordance - something wrong with schedule file?\n"); - result -= REPORT_STEP_INCOMPATIBLE; + *result -= REPORT_STEP_INCOMPATIBLE; } if (interactive) { @@ -1323,6 +1357,13 @@ void enkf_state_ecl_write(enkf_state_type * enkf_state, enkf_fs_type * fs) { ----------------------------------------------------------------------------------------- */ + const shared_info_type * shared_info = enkf_state->shared_info; + const model_config_type * model_config = shared_info->model_config; + const char * base_name = model_config_get_gen_kw_export_file(model_config); + char * export_file_name = util_alloc_filename( run_info->run_path , base_name , NULL); + FILE * export_file = util_mkdir_fopen(export_file_name, "w"); + + const int num_keys = hash_get_size(enkf_state->node_hash); char ** key_list = hash_alloc_keylist(enkf_state->node_hash); int iens = enkf_state_get_iens( enkf_state ); @@ -1338,16 +1379,19 @@ void enkf_state_ecl_write(enkf_state_type * enkf_state, enkf_fs_type * fs) { node_id_type node_id = {.report_step = 0, .iens = iens , .state = ANALYZED }; - + if (enkf_node_has_data( enkf_node , fs , node_id)) - enkf_node_ecl_write(enkf_node , run_info->run_path , NULL , run_info->step1); + enkf_node_ecl_write(enkf_node , run_info->run_path , export_file , run_info->step1); } else - enkf_node_ecl_write(enkf_node , run_info->run_path , NULL , run_info->step1); + enkf_node_ecl_write(enkf_node , run_info->run_path , export_file , run_info->step1); } } } util_free_stringlist(key_list , num_keys); + + fclose(export_file); + free(export_file_name); } } @@ -1597,9 +1641,9 @@ static void enkf_state_set_dynamic_subst_kw(enkf_state_type * enkf_state , const if (run_path != NULL) { /** Make absolutely sure the path available as is absolute. */ - char abs_runpath[1024]; - realpath( run_path , abs_runpath ); + char * abs_runpath = util_alloc_realpath( run_path ); enkf_state_add_subst_kw(enkf_state , "RUNPATH" , abs_runpath , NULL); + free( abs_runpath ); } @@ -1734,14 +1778,18 @@ static void enkf_state_init_eclipse(enkf_state_type *enkf_state, enkf_fs_type * util_make_path(run_info->run_path); { if (ecl_config_get_schedule_target( ecl_config ) != NULL) { - char * schedule_file = util_alloc_filename(run_info->run_path , ecl_config_get_schedule_target( ecl_config ) , NULL); + + char * schedule_file_target = util_alloc_filename(run_info->run_path , ecl_config_get_schedule_target( ecl_config ) , NULL); + char * schedule_file_target_path = util_split_alloc_dirname(schedule_file_target); + util_make_path(schedule_file_target_path); + free(schedule_file_target_path); if (run_info->run_mode == ENKF_ASSIMILATION) - sched_file_fprintf_i( ecl_config_get_sched_file( ecl_config ) , run_info->step2 , schedule_file); + sched_file_fprintf_i( ecl_config_get_sched_file( ecl_config ) , run_info->step2 , schedule_file_target); else - sched_file_fprintf( ecl_config_get_sched_file( ecl_config ) , schedule_file); + sched_file_fprintf( ecl_config_get_sched_file( ecl_config ) , schedule_file_target); - free(schedule_file); + free(schedule_file_target); } } @@ -1869,12 +1917,12 @@ static void enkf_state_internal_retry(enkf_state_type * enkf_state , enkf_fs_typ const int iens = member_config_get_iens( my_config ); if (load_failure) - log_add_fmt_message(shared_info->logh , 1 , NULL , "[%03d:%04d - %04d] Failed to load all data.",iens , run_info->step1 , run_info->step2); + ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Failed to load all data.",iens , run_info->step1 , run_info->step2); else - log_add_fmt_message(shared_info->logh , 1 , NULL , "[%03d:%04d - %04d] Forward model failed.",iens, run_info->step1 , run_info->step2); + ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Forward model failed.",iens, run_info->step1 , run_info->step2); if (run_info->num_internal_submit < run_info->max_internal_submit) { - log_add_fmt_message( shared_info->logh , 1 , NULL , "[%03d] Resampling and resubmitting realization." ,iens); + ert_log_add_fmt_message( 1 , NULL , "[%03d] Resampling and resubmitting realization." ,iens); { /* Reinitialization of the nodes */ stringlist_type * init_keys = ensemble_config_alloc_keylist_from_var_type( enkf_state->ensemble_config , DYNAMIC_STATE + PARAMETER ); @@ -2021,7 +2069,6 @@ static void enkf_state_clear_runpath( const enkf_state_type * enkf_state ) { */ static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , enkf_fs_type * fs) { - const shared_info_type * shared_info = enkf_state->shared_info; run_info_type * run_info = enkf_state->run_info; const member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); @@ -2034,7 +2081,7 @@ static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , e in this scope whether the results can be loaded back; if that is OK the final status is updated, otherwise: restart. */ - log_add_fmt_message( shared_info->logh , 2 , NULL , "[%03d:%04d-%04d] Forward model complete - starting to load results." , iens , run_info->step1, run_info->step2); + ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Forward model complete - starting to load results." , iens , run_info->step1, run_info->step2); enkf_state_load_from_forward_model(enkf_state , fs , &result , false , NULL); if (result & REPORT_STEP_INCOMPATIBLE) { @@ -2052,7 +2099,7 @@ static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , e (should be avoided) to JOB_RUN_OK. */ run_info->run_status = JOB_RUN_OK; - log_add_fmt_message( shared_info->logh , 2 , NULL , "[%03d:%04d-%04d] Results loaded successfully." , iens , run_info->step1, run_info->step2); + ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Results loaded successfully." , iens , run_info->step1, run_info->step2); enkf_state_clear_runpath( enkf_state ); run_info->__ready = false; /* Setting it to false - for the next round ??? */ @@ -2076,7 +2123,6 @@ bool enkf_state_complete_forward_modelOK__(void * arg ) { static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * enkf_state , enkf_fs_type * fs, bool is_retry) { - const shared_info_type * shared_info = enkf_state->shared_info; run_info_type * run_info = enkf_state->run_info; const member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); @@ -2094,7 +2140,7 @@ static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * e return false; } } else { - log_add_fmt_message(shared_info->logh, 1, NULL, "[%03d:%04d-%04d] FAILED COMPLETELY.", iens, run_info->step1, run_info->step2); + ert_log_add_fmt_message( 1, NULL, "[%03d:%04d-%04d] FAILED COMPLETELY.", iens, run_info->step1, run_info->step2); if (run_info->run_status != JOB_LOAD_FAILURE) run_info->run_status = JOB_RUN_FAILURE; @@ -2169,6 +2215,7 @@ void enkf_state_init_run(enkf_state_type * state , state_enum init_state_parameter , state_enum init_state_dynamic , int load_start , + int iter , int step1 , int step2) { @@ -2186,6 +2233,7 @@ void enkf_state_init_run(enkf_state_type * state , load_start , step1 , step2 , + iter , member_config_get_iens( my_config ), model_config_get_runpath_fmt( shared_info->model_config ), state->subst_list ); diff --git a/ThirdParty/Ert/devel/libenkf/src/ensemble_config.c b/ThirdParty/Ert/devel/libenkf/src/ensemble_config.c index b06af85634..5a88d74f10 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ensemble_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/ensemble_config.c @@ -32,6 +32,7 @@ #include #include #include +#include #include @@ -67,7 +68,10 @@ #include +#define ENSEMBLE_CONFIG_TYPE_ID 8825306 + struct ensemble_config_struct { + UTIL_TYPE_ID_DECLARATION; pthread_mutex_t mutex; char * gen_kw_format_string; /* format string used when creating gen_kw search/replace strings. */ hash_type * config_nodes; /* a hash of enkf_config_node instances - which again conatin pointers to e.g. field_config objects. */ @@ -78,6 +82,9 @@ struct ensemble_config_struct { }; +UTIL_IS_INSTANCE_FUNCTION( ensemble_config , ENSEMBLE_CONFIG_TYPE_ID ) +UTIL_SAFE_CAST_FUNCTION( ensemble_config , ENSEMBLE_CONFIG_TYPE_ID ) + /** setting the format string used to 'mangle' the string in the gen_kw @@ -135,9 +142,10 @@ void ensemble_config_set_refcase( ensemble_config_type * ensemble_config , const -ensemble_config_type * ensemble_config_alloc_empty( ) { - +ensemble_config_type * ensemble_config_alloc( ) { ensemble_config_type * ensemble_config = util_malloc(sizeof * ensemble_config ); + + UTIL_TYPE_ID_INIT( ensemble_config , ENSEMBLE_CONFIG_TYPE_ID ); ensemble_config->config_nodes = hash_alloc(); ensemble_config->field_trans_table = field_trans_table_alloc(); ensemble_config->refcase = NULL; @@ -232,14 +240,16 @@ bool ensemble_config_have_forward_init( const ensemble_config_type * ensemble_co return ensemble_config->have_forward_init; } -void ensemble_config_add_node__( ensemble_config_type * ensemble_config , enkf_config_node_type * node) { - - const char * key = enkf_config_node_get_key( node ); - if (ensemble_config_has_key(ensemble_config , key)) - util_abort("%s: a configuration object:%s has already been added - aborting \n",__func__ , key); - - hash_insert_hash_owned_ref(ensemble_config->config_nodes , key , node , enkf_config_node_free__); - ensemble_config->have_forward_init |= enkf_config_node_use_forward_init( node ); +void ensemble_config_add_node( ensemble_config_type * ensemble_config , enkf_config_node_type * node) { + if (node) { + const char * key = enkf_config_node_get_key( node ); + if (ensemble_config_has_key(ensemble_config , key)) + util_abort("%s: a configuration object:%s has already been added - aborting \n",__func__ , key); + + hash_insert_hash_owned_ref(ensemble_config->config_nodes , key , node , enkf_config_node_free__); + ensemble_config->have_forward_init |= enkf_config_node_use_forward_init( node ); + } else + util_abort("%s: internal error - tried to add NULL node to ensemble configuration \n",__func__); } @@ -289,11 +299,7 @@ void ensemble_config_clear_obs_keys(ensemble_config_type * ensemble_config) { -void ensemble_config_add_GEN_PARAM_config_item( config_type * config ) { - config_schema_item_type * item; - item = config_add_schema_item(config , GEN_PARAM_KEY , false ); - config_schema_item_set_argc_minmax(item , 5 , CONFIG_DEFAULT_ARG_MAX); -} + void ensemble_config_add_config_items(config_type * config) { @@ -314,7 +320,6 @@ void ensemble_config_add_config_items(config_type * config) { /*****************************************************************/ - ensemble_config_add_GEN_PARAM_config_item( config ); item = config_add_schema_item(config , GEN_KW_KEY , false ); config_schema_item_set_argc_minmax(item , 4 , 6); @@ -331,9 +336,8 @@ void ensemble_config_add_config_items(config_type * config) { - - item = config_add_schema_item(config , GEN_DATA_KEY , false ); - config_schema_item_set_argc_minmax(item , 1 , CONFIG_DEFAULT_ARG_MAX); + enkf_config_node_add_GEN_PARAM_config_schema( config ); + enkf_config_node_add_GEN_DATA_config_schema( config ); item = config_add_schema_item(config , SUMMARY_KEY , false ); /* can have several summary keys on each line. */ config_schema_item_set_argc_minmax(item , 1 , CONFIG_DEFAULT_ARG_MAX); @@ -355,49 +359,39 @@ void ensemble_config_add_config_items(config_type * config) { } + +/* + The var type parameter is determined by inspecting the + combination of input parameters. It is possible to specify an + invalid input combination; that should be identified with a call + to gen_data_config_is_valid() in the calling scope. + + + PARAMETER: init_file_fmt != NULL + enkf_outfile_fmt != NULL + enkf_infile_fmt == NULL + + DYNAMIC_STATE: init_file_fmt != NULL + enkf_outfile_fmt != NULL + enkf_infile_fmt != NULL + + DYNAMIC_RESULT: init_file_fmt == NULL + enkf_outfile_fmt == NULL + enkf_infile_fmt != NULL + +*/ + + void ensemble_config_init_GEN_DATA( ensemble_config_type * ensemble_config , const config_type * config) { -/* gen_param - should be unified with the gen_data*/ const config_content_item_type * item = config_get_content_item( config , GEN_DATA_KEY ); if (item != NULL) { int i; for (i=0; i < config_content_item_get_size(item); i++) { const config_content_node_type * node = config_content_item_iget_node( item , i ); - const char * node_key = config_content_node_iget( node , 0 ); - { - hash_type * options = hash_alloc(); - - config_content_node_init_opt_hash( node , options , 1 ); - { - gen_data_file_format_type input_format = gen_data_config_check_format( hash_safe_get( options , INPUT_FORMAT_KEY)); - gen_data_file_format_type output_format = gen_data_config_check_format( hash_safe_get( options , OUTPUT_FORMAT_KEY)); - const char * init_file_fmt = hash_safe_get( options , INIT_FILES_KEY); - const char * ecl_file = hash_safe_get( options , ECL_FILE_KEY); - const char * template = hash_safe_get( options , TEMPLATE_KEY); - const char * data_key = hash_safe_get( options , KEY_KEY); - const char * result_file = hash_safe_get( options , RESULT_FILE_KEY); - const char * min_std_file = hash_safe_get( options , MIN_STD_KEY); - const char * forward_string = hash_safe_get( options , FORWARD_INIT_KEY ); - enkf_config_node_type * config_node; - bool forward_init = false; - - if (forward_string) { - if (!util_sscanf_bool( forward_string , &forward_init)) - fprintf(stderr,"** Warning: parsing %s as bool failed - using FALSE \n",forward_string); - } - - if (util_int_format_count( result_file ) == 1) { - config_node = ensemble_config_add_gen_data( ensemble_config , node_key , forward_init); - enkf_config_node_update_gen_data( config_node , input_format , output_format , init_file_fmt , template , data_key , ecl_file , result_file , min_std_file); - { - const gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); - if (!gen_data_config_is_valid( gen_data_config )) - util_abort("%s: sorry the gen_param key:%s is not valid \n",__func__ , node_key); - } - } else - fprintf(stderr , "** WARNING: The RESULT_FILE: attribute must point to a filename format with an embedded %%d - the GEN_DATA key:%s will be ignored\n", node_key); - } - hash_free( options ); - } + enkf_config_node_type * config_node = enkf_config_node_alloc_GEN_DATA_from_config( node ); + if (config_node) + ensemble_config_add_node( ensemble_config , config_node ); + } } } @@ -407,42 +401,12 @@ void ensemble_config_init_GEN_PARAM( ensemble_config_type * ensemble_config , co /* gen_param - should be unified with the gen_data*/ const config_content_item_type * item = config_get_content_item( config , GEN_PARAM_KEY ); if (item != NULL) { - int i; - for (i=0; i < config_content_item_get_size(item); i++) { + for (int i=0; i < config_content_item_get_size(item); i++) { const config_content_node_type * node = config_content_item_iget_node( item , i ); - const char * node_key = config_content_node_iget( node , 0 ); - const char * ecl_file = config_content_node_iget( node , 1 ); - { - hash_type * options = hash_alloc(); - - config_content_node_init_opt_hash( node , options , 2 ); - { - gen_data_file_format_type input_format = gen_data_config_check_format( hash_safe_get( options , INPUT_FORMAT_KEY)); - gen_data_file_format_type output_format = gen_data_config_check_format( hash_safe_get( options , OUTPUT_FORMAT_KEY)); - const char * init_file_fmt = hash_safe_get( options , INIT_FILES_KEY); - const char * template = hash_safe_get( options , TEMPLATE_KEY); - const char * data_key = hash_safe_get( options , KEY_KEY); - const char * result_file = hash_safe_get( options , RESULT_FILE_KEY); - const char * min_std_file = hash_safe_get( options , MIN_STD_KEY); - const char * forward_string = hash_safe_get( options , FORWARD_INIT_KEY ); - enkf_config_node_type * config_node; - bool forward_init = false; - - if (forward_string) { - if (!util_sscanf_bool( forward_string , &forward_init)) - fprintf(stderr,"** Warning: parsing %s as bool failed - using FALSE \n",forward_string); - } - - config_node = ensemble_config_add_gen_data( ensemble_config , node_key , forward_init); - enkf_config_node_update_gen_data( config_node , input_format , output_format , init_file_fmt , template , data_key , ecl_file , result_file , min_std_file); - { - const gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); - if (!gen_data_config_is_valid( gen_data_config )) - util_abort("%s: sorry the gen_param key:%s is not valid \n",__func__ , node_key); - } - } - hash_free( options ); - } + enkf_config_node_type * config_node = enkf_config_node_alloc_GEN_PARAM_from_config( node ); + if (config_node) + ensemble_config_add_node( ensemble_config , config_node ); + } } } @@ -802,16 +766,6 @@ bool ensemble_config_has_impl_type(const ensemble_config_type * config, const e } -void ensemble_config_init_internalization( ensemble_config_type * config ) { - hash_iter_type * iter = hash_iter_alloc(config->config_nodes); - const char * key = hash_iter_get_next_key(iter); - while (key != NULL) { - enkf_config_node_init_internalization( hash_get(config->config_nodes , key)); - key = hash_iter_get_next_key(iter); - } - hash_iter_free(iter); -} - @@ -848,24 +802,19 @@ int ensemble_config_get_observations( const ensemble_config_type * config , enkf */ enkf_config_node_type * ensemble_config_add_field( ensemble_config_type * config , const char * key , ecl_grid_type * ecl_grid , bool forward_init) { - enkf_config_node_type * config_node = enkf_config_node_new_field( key , ecl_grid , config->field_trans_table , forward_init); - ensemble_config_add_node__( config , config_node ); + enkf_config_node_type * config_node = enkf_config_node_alloc_field( key , ecl_grid , config->field_trans_table , forward_init); + ensemble_config_add_node( config , config_node ); return config_node; } enkf_config_node_type * ensemble_config_add_gen_kw( ensemble_config_type * config , const char * key , bool forward_init) { enkf_config_node_type * config_node = enkf_config_node_new_gen_kw( key , config->gen_kw_format_string , forward_init); - ensemble_config_add_node__( config , config_node ); + ensemble_config_add_node( config , config_node ); return config_node; } -enkf_config_node_type * ensemble_config_add_gen_data( ensemble_config_type * config , const char * key , bool forward_init) { - enkf_config_node_type * config_node = enkf_config_node_new_gen_data( key , forward_init); - ensemble_config_add_node__( config , config_node ); - return config_node; -} /** @@ -892,7 +841,7 @@ enkf_config_node_type * ensemble_config_add_summary(ensemble_config_type * ensem } else { if ((ensemble_config->refcase == NULL) || (ecl_sum_has_general_var( ensemble_config->refcase , key ))) { config_node = enkf_config_node_alloc_summary( key , load_fail); - ensemble_config_add_node__(ensemble_config , config_node ); + ensemble_config_add_node(ensemble_config , config_node ); } else fprintf(stderr,"** warning: the refcase:%s does not contain the summary key:\"%s\" - will be ignored.\n", ecl_sum_get_case( ensemble_config->refcase ) , key); } @@ -903,7 +852,7 @@ enkf_config_node_type * ensemble_config_add_summary(ensemble_config_type * ensem enkf_config_node_type * ensemble_config_add_surface( ensemble_config_type * ensemble_config , const char * key , bool forward_init) { enkf_config_node_type * config_node = enkf_config_node_new_surface( key , forward_init ); - ensemble_config_add_node__( ensemble_config , config_node ); + ensemble_config_add_node( ensemble_config , config_node ); return config_node; } @@ -922,7 +871,7 @@ enkf_config_node_type * ensemble_config_add_container( ensemble_config_type * en { enkf_config_node_type * config_node = enkf_config_node_new_container( local_key ); - ensemble_config_add_node__( ensemble_config , config_node ); + ensemble_config_add_node( ensemble_config , config_node ); if (random_key) free( local_key ); return config_node; diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_log.c b/ThirdParty/Ert/devel/libenkf/src/ert_log.c new file mode 100644 index 0000000000..de2fdde2fe --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/ert_log.c @@ -0,0 +1,100 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_log.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include + +#include + +#include +#include + + +static log_type * logh = NULL; /* Handle to an open log file. */ + +void ert_log_init_log( int log_level , const char * log_file_name, bool verbose){ + logh = log_open( NULL , DEFAULT_LOG_LEVEL ); + + log_set_level(logh, log_level); + if (log_file_name) + log_reopen( logh , log_file_name); + + if (verbose) + printf("Activity will be logged to ..............: %s \n",log_get_filename( logh )); + log_add_message(logh , 1 , NULL , "ert configuration loaded" , false); +} + +void ert_log_add_message_py(int message_level, char* message){ + ert_log_add_message(message_level, NULL, message, false); +} + +void ert_log_add_message(int message_level , FILE * dup_stream , char* message, bool free_message) { + if(logh==NULL) + ert_log_init_log(1,NULL,true); + log_add_message(logh, message_level, dup_stream, message, free_message); +} + +void ert_log_add_fmt_message(int message_level , FILE * dup_stream , const char * fmt , ...) { + if (log_include_message(logh,message_level)) { + char * message; + va_list ap; + va_start(ap , fmt); + message = util_alloc_sprintf_va( fmt , ap ); + log_add_message( logh , message_level , dup_stream , message , true); + va_end(ap); + } +} + +void ert_log_close(){ + if (log_is_open( logh )) + log_add_message( logh , false , NULL , "Exiting ert application normally - all is fine(?)" , false); + log_close( logh ); +} + +bool ert_log_is_open(){ + if(logh==NULL) + return false; + return log_is_open(logh); +} + +void ert_log_set_log_level(int log_level){ + if(logh==NULL) + ert_log_init_log(1,NULL,true); + log_set_level(logh, log_level); +} + +int ert_log_get_log_level(){ + if(logh==NULL) + ert_log_init_log(1,NULL,true); + return log_get_level(logh); +} + +const char * ert_log_get_filename() { + if(logh==NULL) + ert_log_init_log(1,NULL,true); + return log_get_filename(logh); +} + +log_type * ert_log_get_logh() { + if(logh==NULL) + ert_log_init_log(1,NULL,true); + return logh; +} + +void ert_log_open_empty(){ + logh = log_open(NULL, DEFAULT_LOG_LEVEL); +} diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_report_list.c b/ThirdParty/Ert/devel/libenkf/src/ert_report_list.c index cb38a1502b..1acd29813c 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ert_report_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/ert_report_list.c @@ -169,6 +169,8 @@ void ert_report_list_free( ert_report_list_type * report_list ){ stringlist_free( report_list->well_list ); subst_list_free( report_list->global_context ); vector_free( report_list->report_list ); + free( report_list->target_path ); + free( report_list->plot_path ); free( report_list ); } diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_test_context.c b/ThirdParty/Ert/devel/libenkf/src/ert_test_context.c new file mode 100644 index 0000000000..15a0fe3c74 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/ert_test_context.c @@ -0,0 +1,183 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_test_context.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include + +#include +#include +#include +#include + +#include +#include + + +#define ERT_TEST_CONTEXT_TYPE_ID 99671055 +struct ert_test_context_struct { + UTIL_TYPE_ID_DECLARATION; + enkf_main_type * enkf_main; + test_work_area_type * work_area; + rng_type * rng; +}; + + +UTIL_IS_INSTANCE_FUNCTION( ert_test_context , ERT_TEST_CONTEXT_TYPE_ID ) + + +static ert_test_context_type * ert_test_context_alloc__( const char * test_name , const char * model_config , const char * site_config, bool python_mode) { + ert_test_context_type * test_context = util_malloc( sizeof * test_context ); + UTIL_TYPE_ID_INIT( test_context , ERT_TEST_CONTEXT_TYPE_ID ); + + /* + This environment variable is set to ensure that test context will + parse the correct files when loading site config. + */ + if (python_mode) + setenv("ERT_UI_MODE" , "gui" , 1); + else + setenv("ERT_UI_MODE" , "tui" , 1); + + + if (util_file_exists(model_config)) { + test_context->work_area = test_work_area_alloc(test_name); + test_work_area_set_store( test_context->work_area , false ); + test_work_area_copy_parent_content(test_context->work_area , model_config ); + { + char * config_file = util_split_alloc_filename( model_config ); + test_context->enkf_main = enkf_main_bootstrap( site_config , config_file , true , false ); + free( config_file ); + } + test_context->rng = rng_alloc( MZRAN , INIT_DEV_URANDOM ); + } else { + test_context->enkf_main = NULL; + test_context->work_area = NULL; + test_context->rng = NULL; + } + return test_context; +} + +ert_test_context_type * ert_test_context_alloc( const char * test_name , const char * model_config , const char * site_config) { + return ert_test_context_alloc__( test_name , model_config , site_config , false ); +} + + +ert_test_context_type * ert_test_context_alloc_python( const char * test_name , const char * model_config , const char * site_config) { + return ert_test_context_alloc__( test_name , model_config , site_config , true ); +} + + + +enkf_main_type * ert_test_context_get_main( ert_test_context_type * test_context ) { + return test_context->enkf_main; +} + + +const char * ert_test_context_get_cwd( const ert_test_context_type * test_context ) { + return test_work_area_get_cwd( test_context->work_area ); +} + + + +void ert_test_context_free( ert_test_context_type * test_context ) { + + if (test_context->enkf_main) + enkf_main_free( test_context->enkf_main ); + + if (test_context->work_area) + test_work_area_free( test_context->work_area ); + + if (test_context->rng) + rng_free( test_context->rng ); + + free( test_context ); +} + + +bool ert_test_context_install_workflow_job( ert_test_context_type * test_context , const char * job_name , const char * job_file) { + if (util_file_exists( job_file )) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list( enkf_main ); + ert_workflow_list_add_job( workflow_list , job_name , job_file ); + return ert_workflow_list_has_job( workflow_list , job_name ); + } else + return false; +} + + +bool ert_test_context_install_workflow( ert_test_context_type * test_context , const char * workflow_name , const char * workflow_file) { + if (util_file_exists( workflow_file )) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list( enkf_main ); + ert_workflow_list_add_workflow( workflow_list , workflow_file , workflow_name ); + return ert_workflow_list_has_workflow( workflow_list , workflow_name); + } else + return false; +} + + +void ert_test_context_fwrite_workflow_job( FILE * stream , const char * job_name , const stringlist_type * args) { + fprintf(stream , "%s " , job_name); + stringlist_fprintf(args , " ", stream); + fprintf(stream , "\n"); +} + + +bool ert_test_context_run_worklow( ert_test_context_type * test_context , const char * workflow_name) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list( enkf_main ); + + if (ert_workflow_list_has_workflow( workflow_list , workflow_name )){ + bool result = ert_workflow_list_run_workflow_blocking( workflow_list , workflow_name , enkf_main ); + return result; + } + else{ + return false; + } +} + + + +bool ert_test_context_run_worklow_job( ert_test_context_type * test_context , const char * job_name, const stringlist_type * args) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list( enkf_main ); + + if (ert_workflow_list_has_job( workflow_list , job_name )) { + bool status; + { + char * workflow = util_alloc_sprintf("WORKFLOW-%06d" , rng_get_int( test_context->rng , 1000000)); + { + FILE * stream = util_fopen( workflow , "w"); + ert_test_context_fwrite_workflow_job( stream , job_name , args ); + fclose(stream); + } + ert_test_context_install_workflow( test_context , workflow , workflow); + status = ert_test_context_run_worklow( test_context , workflow ); + free(workflow); + } + return status; + } else + return false; +} + + +void ert_test_context_set_store( ert_test_context_type * test_context , bool store) { + test_work_area_set_store( test_context->work_area , store ); +} diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c b/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c index 653e15345f..1089a34c12 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c @@ -27,6 +27,7 @@ #include #include #include +#include #include #include @@ -39,11 +40,16 @@ #include #include #include +#include +#define ERT_WORKFLOW_LIST_TYPE_ID 8856275 + struct ert_workflow_list_struct { + UTIL_TYPE_ID_DECLARATION; stringlist_type * path_list; hash_type * workflows; + hash_type * alias_map; workflow_joblist_type * joblist; const subst_list_type * context; const config_error_type * last_error; @@ -54,8 +60,10 @@ struct ert_workflow_list_struct { ert_workflow_list_type * ert_workflow_list_alloc(const subst_list_type * context) { ert_workflow_list_type * workflow_list = util_malloc( sizeof * workflow_list ); + UTIL_TYPE_ID_INIT( workflow_list , ERT_WORKFLOW_LIST_TYPE_ID ); workflow_list->path_list = stringlist_alloc_new(); workflow_list->workflows = hash_alloc(); + workflow_list->alias_map = hash_alloc(); workflow_list->joblist = workflow_joblist_alloc(); workflow_list->context = context; workflow_list->last_error = NULL; @@ -64,13 +72,21 @@ ert_workflow_list_type * ert_workflow_list_alloc(const subst_list_type * context } + +UTIL_IS_INSTANCE_FUNCTION( ert_workflow_list , ERT_WORKFLOW_LIST_TYPE_ID ) + void ert_workflow_list_set_verbose( ert_workflow_list_type * workflow_list , bool verbose) { workflow_list->verbose = verbose; } +subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list) { + return workflow_list->context; +} + void ert_workflow_list_free( ert_workflow_list_type * workflow_list ) { hash_free( workflow_list->workflows ); + hash_free( workflow_list->alias_map ); stringlist_free( workflow_list->path_list ); workflow_joblist_free( workflow_list->joblist ); free( workflow_list ); @@ -81,14 +97,21 @@ void ert_workflow_list_free( ert_workflow_list_type * workflow_list ) { workflow_type * ert_workflow_list_add_workflow( ert_workflow_list_type * workflow_list , const char * workflow_file , const char * workflow_name) { if (util_file_exists( workflow_file )) { workflow_type * workflow = workflow_alloc( workflow_file , workflow_list->joblist ); - if (workflow_name != NULL) - hash_insert_hash_owned_ref( workflow_list->workflows , workflow_name , workflow , workflow_free__); - else { - char * name; + char * name; + + if (workflow_name == NULL) util_alloc_file_components( workflow_file , NULL , &name , NULL ); - hash_insert_hash_owned_ref( workflow_list->workflows , name , workflow , workflow_free__); + else + name = workflow_name; + + + hash_insert_hash_owned_ref( workflow_list->workflows , name , workflow , workflow_free__); + if (hash_has_key( workflow_list->alias_map , name)) + hash_del( workflow_list->alias_map , name); + + if (workflow_name == NULL) free( name ); - } + return workflow; } else return NULL; @@ -97,8 +120,8 @@ workflow_type * ert_workflow_list_add_workflow( ert_workflow_list_type * workflo void ert_workflow_list_add_alias( ert_workflow_list_type * workflow_list , const char * real_name , const char * alias) { - workflow_type * workflow = ert_workflow_list_get_workflow( workflow_list , real_name ); - hash_insert_ref( workflow_list->workflows , alias , workflow ); + if (!util_string_equal( real_name , alias)) + hash_insert_ref( workflow_list->alias_map , alias , real_name ); } @@ -109,16 +132,23 @@ void ert_workflow_list_add_job( ert_workflow_list_type * workflow_list , const c util_alloc_file_components( config_file , NULL , &name , NULL ); if (!workflow_joblist_add_job_from_file( workflow_list->joblist , name , config_file )) - fprintf(stderr,"** Warning: failed to add workflow job:%s from:%s \n",job_name , config_file ); + fprintf(stderr,"** Warning: failed to add workflow job:%s from:%s \n",name , config_file ); if (job_name == NULL) free(name); } +bool ert_workflow_list_has_job( const ert_workflow_list_type * workflow_list , const char * job_name) { + return workflow_joblist_has_job( workflow_list->joblist , job_name ); +} + +const workflow_job_type * ert_workflow_list_get_job( const ert_workflow_list_type * workflow_list , const char * job_name) { + return workflow_joblist_get_job(workflow_list->joblist, job_name); +} -void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_list , const char * path , log_type * logh) { +void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_list , const char * path ) { DIR * dirH = opendir( path ); if (dirH) { while (true) { @@ -128,8 +158,9 @@ void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_ char * full_path = util_alloc_filename( path , entry->d_name , NULL ); if (util_is_file( full_path )) { - if (log_is_open( logh )) - log_add_message( logh , 1 , NULL , util_alloc_sprintf("Adding workflow job:%s " , full_path ), true); + if (ert_log_is_open()) + ert_log_add_message( 1 , NULL , util_alloc_sprintf("Adding workflow job:%s " , full_path ), true); + ert_workflow_list_add_job( workflow_list , entry->d_name , full_path ); } @@ -144,7 +175,7 @@ void ert_workflow_list_add_jobs_in_directory( ert_workflow_list_type * workflow_ } -void ert_workflow_list_init( ert_workflow_list_type * workflow_list , config_type * config , log_type * logh) { +void ert_workflow_list_init( ert_workflow_list_type * workflow_list , config_type * config ) { /* Adding jobs */ { const config_content_item_type * jobpath_item = config_get_content_item( config , WORKFLOW_JOB_DIRECTORY_KEY); @@ -153,7 +184,7 @@ void ert_workflow_list_init( ert_workflow_list_type * workflow_list , config_typ config_content_node_type * path_node = config_content_item_iget_node( jobpath_item , i ); for (int j=0; j < config_content_node_get_size( path_node ); j++) - ert_workflow_list_add_jobs_in_directory( workflow_list , config_content_node_iget_as_abspath( path_node , j ) , logh); + ert_workflow_list_add_jobs_in_directory( workflow_list , config_content_node_iget_as_abspath( path_node , j ) ); } } } @@ -205,17 +236,23 @@ void ert_workflow_list_add_config_items( config_type * config ) { workflow_type * ert_workflow_list_get_workflow(ert_workflow_list_type * workflow_list , const char * workflow_name ) { - return hash_get( workflow_list->workflows , workflow_name ); + const char * lookup_name = workflow_name; + + if (hash_has_key( workflow_list->alias_map , workflow_name)) + lookup_name = hash_get( workflow_list->alias_map , workflow_name ); + + return hash_get( workflow_list->workflows , lookup_name ); } bool ert_workflow_list_has_workflow(ert_workflow_list_type * workflow_list , const char * workflow_name ) { - return hash_has_key( workflow_list->workflows , workflow_name ); + return + hash_has_key( workflow_list->workflows , workflow_name ) || + hash_has_key( workflow_list->alias_map , workflow_name); } -bool ert_workflow_list_run_workflow__(ert_workflow_list_type * workflow_list , workflow_type * workflow, bool verbose , void * self) { - bool runOK = workflow_run( workflow , self , verbose , workflow_list->context); - +bool ert_workflow_list_run_workflow__(ert_workflow_list_type * workflow_list, workflow_type * workflow, bool verbose , void * self) { + bool runOK = workflow_run( workflow, self , verbose , workflow_list->context); if (runOK) workflow_list->last_error = NULL; else @@ -224,9 +261,17 @@ bool ert_workflow_list_run_workflow__(ert_workflow_list_type * workflow_list , return runOK; } -bool ert_workflow_list_run_workflow(ert_workflow_list_type * workflow_list , const char * workflow_name , void * self) { + +bool ert_workflow_list_run_workflow_blocking(ert_workflow_list_type * workflow_list , const char * workflow_name , void * self) { workflow_type * workflow = ert_workflow_list_get_workflow( workflow_list , workflow_name ); - return ert_workflow_list_run_workflow__( workflow_list , workflow , workflow_list->verbose , self); + bool result = ert_workflow_list_run_workflow__( workflow_list, workflow , workflow_list->verbose , self); + return result; +} + + +bool ert_workflow_list_run_workflow(ert_workflow_list_type * workflow_list, const char * workflow_name , void * self) { + workflow_type * workflow = ert_workflow_list_get_workflow( workflow_list , workflow_name ); + return ert_workflow_list_run_workflow__( workflow_list, workflow , workflow_list->verbose , self); } @@ -240,3 +285,8 @@ stringlist_type * ert_workflow_list_alloc_namelist( ert_workflow_list_type * wor const config_error_type * ert_workflow_list_get_last_error( const ert_workflow_list_type * workflow_list) { return workflow_list->last_error; } + + +int ert_workflow_list_get_size( const ert_workflow_list_type * workflow_list) { + return hash_get_size( workflow_list->workflows ) + hash_get_size( workflow_list->alias_map); +} diff --git a/ThirdParty/Ert/devel/libenkf/src/field.c b/ThirdParty/Ert/devel/libenkf/src/field.c index a70d77e2f7..8a2ca64a32 100644 --- a/ThirdParty/Ert/devel/libenkf/src/field.c +++ b/ThirdParty/Ert/devel/libenkf/src/field.c @@ -38,6 +38,7 @@ #include #include #include +#include GET_DATA_SIZE_HEADER(field); @@ -72,39 +73,72 @@ struct field_struct { -#define EXPORT_MACRO \ -{ \ - int nx,ny,nz; \ - field_config_get_dims(field->config , &nx , &ny , &nz); \ - int i,j,k; \ - for (k=0; k < nz; k++) { \ - for (j=0; j < ny; j++) { \ - for (i=0; i < nx; i++) { \ - int index1D = field_config_active_index(config , i , j , k); \ - int index3D; \ - if (rms_index_order) \ - index3D = rms_util_global_index_from_eclipse_ijk(nx,ny,nz,i,j,k); \ - else \ - index3D = i + j * nx + k* nx*ny; \ - if (index1D >= 0) \ - target_data[index3D] = src_data[index1D]; \ - else \ - memcpy(&target_data[index3D] , fill_value , sizeof_ctype_target); \ - } \ - } \ - } \ -} - - -void field_export3D(const field_type * field , void *_target_data , bool rms_index_order , ecl_type_enum target_type , void *fill_value) { +#define EXPORT_MACRO \ +{ \ + int nx,ny,nz; \ + field_config_get_dims(field->config , &nx , &ny , &nz); \ + int i,j,k; \ + for (k=0; k < nz; k++) { \ + for (j=0; j < ny; j++) { \ + for (i=0; i < nx; i++) { \ + bool active_cell = field_config_active_cell(config, i, j, k); \ + bool use_initial_value = false; \ + \ + if (init_file && !active_cell) \ + use_initial_value = true; \ + \ + int source_index = 0; \ + if (use_initial_value) \ + source_index = field_config_global_index(config , i , j , k); \ + else \ + source_index = field_config_active_index(config, i, j, k); \ + \ + int target_index; \ + if (rms_index_order) \ + target_index = rms_util_global_index_from_eclipse_ijk(nx,ny,nz,i,j,k); \ + else \ + target_index = i + j * nx + k* nx*ny; \ + \ + if (use_initial_value) \ + target_data[target_index] = initial_src_data[source_index]; \ + else if (active_cell) \ + target_data[target_index] = src_data[source_index]; \ + else \ + memcpy(&target_data[target_index] , fill_value , sizeof_ctype_target); \ + } \ + } \ + } \ +} \ + + +void field_export3D(const field_type * field , + void *_target_data , + bool rms_index_order , + ecl_type_enum target_type , + void *fill_value, + const char * init_file) { + const field_config_type * config = field->config; ecl_type_enum ecl_type = field_config_get_ecl_type( config ); int sizeof_ctype_target = ecl_util_get_sizeof_ctype(target_type); - + + field_type * initial_field = NULL; + field_config_type * initial_field_config = NULL; + if (init_file) { + ecl_grid_type * grid = field_config_get_grid(config); + bool global_size = true; + initial_field_config = field_config_alloc_empty(field_config_get_key(config), grid, NULL, global_size); + initial_field = field_alloc(initial_field_config); + + field_fload_keep_inactive(initial_field, init_file); + } + switch(ecl_type) { case(ECL_DOUBLE_TYPE): { - const double * src_data = (const double *) field->data; + const double * src_data = (const double *) field->data; + const double * initial_src_data = initial_field ? (const double *) initial_field->data : NULL; + if (target_type == ECL_FLOAT_TYPE) { float *target_data = (float *) _target_data; EXPORT_MACRO; @@ -119,7 +153,8 @@ void field_export3D(const field_type * field , void *_target_data , bool rms_ind break; case(ECL_FLOAT_TYPE): { - const float * src_data = (const float *) field->data; + const float * src_data = (const float *) field->data; + const float * initial_src_data = initial_field ? (const float *) initial_field->data : NULL; if (target_type == ECL_FLOAT_TYPE) { float *target_data = (float *) _target_data; EXPORT_MACRO; @@ -134,7 +169,8 @@ void field_export3D(const field_type * field , void *_target_data , bool rms_ind break; case(ECL_INT_TYPE): { - const int * src_data = (const int *) field->data; + const int * src_data = (const int *) field->data; + const int * initial_src_data = initial_field ? (const int *) initial_field->data : NULL; if (target_type == ECL_FLOAT_TYPE) { float *target_data = (float *) _target_data; EXPORT_MACRO; @@ -154,48 +190,67 @@ void field_export3D(const field_type * field , void *_target_data , bool rms_ind fprintf(stderr,"%s: Sorry field has unexportable type ... \n",__func__); break; } + + if (initial_field) { + field_config_free(initial_field_config); + field_free(initial_field); + } } #undef EXPORT_MACRO /*****************************************************************/ -#define IMPORT_MACRO \ -{ \ - int i,j,k; \ - int nx,ny,nz; \ - field_config_get_dims(field->config , &nx , &ny , &nz); \ - for (k=0; k < nz; k++) { \ - for (j=0; j < ny; j++) { \ - for (i=0; i < nx; i++) { \ - int index1D = field_config_active_index(config , i , j , k); \ - int index3D; \ - if (index1D >= 0) { \ - if (rms_index_order) \ - index3D = rms_util_global_index_from_eclipse_ijk(nx,ny,nz,i,j,k); \ - else \ - index3D = i + j * nx + k* nx*ny; \ - target_data[index1D] = src_data[index3D] ; \ - } \ - } \ - } \ - } \ -} +#define IMPORT_MACRO \ +{ \ + int i,j,k; \ + int nx,ny,nz; \ + field_config_get_dims(field->config , &nx , &ny , &nz); \ + for (k=0; k < nz; k++) { \ + for (j=0; j < ny; j++) { \ + for (i=0; i < nx; i++) { \ + int target_index = keep_inactive_cells ? field_config_global_index(config, i, j, k) : field_config_active_index(config, i, j, k); \ + \ + if (target_index >= 0) { \ + int source_index; \ + if (rms_index_order) \ + source_index = rms_util_global_index_from_eclipse_ijk(nx,ny,nz,i,j,k); \ + else \ + source_index = i + j * nx + k* nx*ny; \ + \ + target_data[target_index] = src_data[source_index] ; \ + } \ + } \ + } \ + } \ +} \ /** The main function of the field_import3D and field_export3D functions are to skip the inactive cells (field_import3D) and - distribute inactive cells (field_export3D). In addition we can - reorganize input/output according to the RMS Roff index convention, - and also perform float <-> double conversions. + distribute inactive cells (field_export3D). + When the flag keep_inactive_cells is set for field_import3D, + the values for the inactive cells are kept. The field argument + must have been allocated with flag global_size = true for this + to work. + When field_export3D is called with argument INIT_FILE, the + exported values for inactive cells are read from the INIT_FILE. + + In addition we can reorganize input/output according to the + RMS Roff index convention, and also perform float <-> double + conversions. Observe that these functions only import/export onto memory buffers, the actual reading and writing of files is done in other functions (calling these). */ -static void field_import3D(field_type * field , const void *_src_data , bool rms_index_order , ecl_type_enum src_type) { +static void field_import3D(field_type * field , + const void *_src_data , + bool rms_index_order , + bool keep_inactive_cells, + ecl_type_enum src_type) { const field_config_type * config = field->config; ecl_type_enum ecl_type = field_config_get_ecl_type(config); @@ -333,10 +388,7 @@ void field_copy(const field_type *src , field_type * target ) { - - - -void field_read_from_buffer(field_type * field , buffer_type * buffer, int report_step, state_enum state) { +void field_read_from_buffer(field_type * field , buffer_type * buffer, enkf_fs_type * fs, int report_step, state_enum state) { int byte_size = field_config_get_byte_size( field->config ); enkf_util_assert_buffer_type(buffer , FIELD); buffer_fread_compressed(buffer , buffer_get_remaining_size( buffer ) , field->data , byte_size); @@ -344,9 +396,12 @@ void field_read_from_buffer(field_type * field , buffer_type * buffer, int repor - - -static void * __field_alloc_3D_data(const field_type * field , int data_size , bool rms_index_order , ecl_type_enum ecl_type , ecl_type_enum target_type) { +static void * __field_alloc_3D_data(const field_type * field , + int data_size , + bool rms_index_order , + ecl_type_enum ecl_type , + ecl_type_enum target_type, + const char * init_file) { void * data = util_calloc(data_size , ecl_util_get_sizeof_ctype(target_type) ); if (ecl_type == ECL_DOUBLE_TYPE) { double fill; @@ -354,21 +409,21 @@ static void * __field_alloc_3D_data(const field_type * field , int data_size , b fill = RMS_INACTIVE_DOUBLE; else fill = 0; - field_export3D(field , data , rms_index_order , target_type , &fill); + field_export3D(field , data , rms_index_order , target_type , &fill, init_file); } else if (ecl_type == ECL_FLOAT_TYPE) { float fill; if (rms_index_order) fill = RMS_INACTIVE_FLOAT; else fill = 0; - field_export3D(field , data , rms_index_order , target_type , &fill); + field_export3D(field , data , rms_index_order , target_type , &fill, init_file); } else if (ecl_type == ECL_INT_TYPE) { int fill; if (rms_index_order) fill = RMS_INACTIVE_INT; else fill = 0; - field_export3D(field , data , rms_index_order , target_type , &fill); + field_export3D(field , data , rms_index_order , target_type , &fill, init_file); } else util_abort("%s: trying to export type != int/float/double - aborting \n",__func__); return data; @@ -391,7 +446,8 @@ static void * __field_alloc_3D_data(const field_type * field , int data_size , b * The function field_ecl_grdecl_export() will write the field to disk in a format suitable for ECLIPSE INCLUDE statements. This means that both active and inactive cells are written, with a - zero fill for the inactive. + zero fill for the inactive. If the argument init_file is set, + the value for the inactive cells are read from this file. * The functions field_xxxx_fortio() writes the field in the ECLIPSE restart format. The function field_ecl_write3D_fortio() @@ -417,12 +473,12 @@ static void * __field_alloc_3D_data(const field_type * field , int data_size , b function to initialize and close down the rms_file instance. */ -static void field_ROFF_export__(const field_type * field , rms_file_type * rms_file) { +static void field_ROFF_export__(const field_type * field , rms_file_type * rms_file, const char * init_file) { const int data_size = field_config_get_volume(field->config); const ecl_type_enum target_type = field_config_get_ecl_type(field->config); /* Could/should in principle be input */ const ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); - void *data = __field_alloc_3D_data(field , data_size , true ,ecl_type , target_type); + void *data = __field_alloc_3D_data(field , data_size , true , ecl_type , target_type, init_file); rms_tagkey_type * data_key = rms_tagkey_alloc_complete("data" , data_size , rms_util_convert_ecl_type(target_type) , data , true); rms_tag_fwrite_parameter(field_config_get_ecl_kw_name(field->config) , data_key , rms_file_get_FILE(rms_file)); rms_tagkey_free(data_key); @@ -467,9 +523,9 @@ static void field_complete_ROFF_export(const field_type * field , rms_file_type implemented. */ -void field_ROFF_export(const field_type * field , const char * filename) { - rms_file_type * rms_file = field_init_ROFF_export(field , filename); - field_ROFF_export__(field , rms_file); /* Should now be possible to several calls to field_ROFF_export__() */ +void field_ROFF_export(const field_type * field , const char * export_filename, const char * init_file) { + rms_file_type * rms_file = field_init_ROFF_export(field , export_filename); + field_ROFF_export__(field , rms_file, init_file); /* Should now be possible to several calls to field_ROFF_export__() */ field_complete_ROFF_export(field , rms_file); } @@ -492,11 +548,11 @@ void field_ecl_write1D_fortio(const field_type * field , fortio_type * fortio) { } -void field_ecl_write3D_fortio(const field_type * field , fortio_type * fortio ) { +void field_ecl_write3D_fortio(const field_type * field , fortio_type * fortio, const char * init_file ) { const int data_size = field_config_get_volume(field->config); const ecl_type_enum target_type = field_config_get_ecl_type(field->config); /* Could/should in principle be input */ const ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); - void *data = __field_alloc_3D_data(field , data_size , false ,ecl_type , target_type); + void *data = __field_alloc_3D_data(field , data_size , false ,ecl_type , target_type, init_file); ecl_kw_fwrite_param_fortio(fortio , field_config_get_ecl_kw_name(field->config), ecl_type , data_size , data); free(data); @@ -513,11 +569,11 @@ static ecl_kw_type * field_alloc_ecl_kw_wrapper__(const field_type * field, void } -void field_ecl_grdecl_export(const field_type * field , FILE * stream) { +void field_ecl_grdecl_export(const field_type * field , FILE * stream, const char * init_file) { const int data_size = field_config_get_volume(field->config); const ecl_type_enum target_type = field_config_get_ecl_type(field->config); /* Could/should in principle be input */ const ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); - void *data = __field_alloc_3D_data(field , data_size , false , ecl_type , target_type ); + void *data = __field_alloc_3D_data(field , data_size , false , ecl_type , target_type, init_file ); ecl_kw_type * ecl_kw = field_alloc_ecl_kw_wrapper__(field , data); ecl_kw_fprintf_grdecl(ecl_kw , stream); ecl_kw_free(ecl_kw); @@ -580,8 +636,6 @@ static bool field_check_finite( const field_type * field) { - - void field_inplace_output_transform(field_type * field ) { field_func_type * output_transform = field_config_get_output_transform(field->config); if (output_transform != NULL) @@ -664,12 +718,17 @@ static void field_revert_output_transform(field_type * field) { transform will *NOT* be applied. */ -void field_export(const field_type * __field, const char * file , fortio_type * restart_fortio , field_file_format_type file_type, bool output_transform) { +void field_export(const field_type * __field, + const char * file , + fortio_type * restart_fortio , + field_file_format_type file_type, + bool output_transform, + const char * init_file) { field_type * field = (field_type *) __field; /* Net effect is no change ... but */ if (output_transform) field_output_transform(field); { - + /* Writes the field to in ecl_kw format to a new file. */ if ((file_type == ECL_KW_FILE_ALL_CELLS) || (file_type == ECL_KW_FILE_ACTIVE_CELLS)) { fortio_type * fortio; @@ -678,19 +737,19 @@ void field_export(const field_type * __field, const char * file , fortio_type * fortio = fortio_open_writer(file , fmt_file , ECL_ENDIAN_FLIP); if (file_type == ECL_KW_FILE_ALL_CELLS) - field_ecl_write3D_fortio(field , fortio); + field_ecl_write3D_fortio(field , fortio, init_file); else field_ecl_write1D_fortio(field , fortio); fortio_fclose(fortio); } else if (file_type == ECL_GRDECL_FILE) { /* Writes the field to a new grdecl file. */ - FILE * stream = util_fopen(file , "w"); - field_ecl_grdecl_export(field , stream); + FILE * stream = util_mkdir_fopen(file , "w"); + field_ecl_grdecl_export(field , stream, init_file); fclose(stream); } else if (file_type == RMS_ROFF_FILE) /* Roff export */ - field_ROFF_export(field , file); + field_ROFF_export(field , file, init_file); else if (file_type == ECL_FILE) /* This entry point is used by the ecl_write() function to write to an ALREADY OPENED eclipse restart file. */ field_ecl_write1D_fortio( field , restart_fortio); @@ -711,24 +770,25 @@ void field_export(const field_type * __field, const char * file , fortio_type * unchanged. */ -void field_ecl_write(const field_type * field , const char * run_path , const char * file , fortio_type * restart_fortio) { +void field_ecl_write(const field_type * field , const char * run_path , const char * file , void * filestream) { field_file_format_type export_format = field_config_get_export_format(field->config); - - if (export_format == ECL_FILE) - field_export(field , NULL , restart_fortio , export_format , true); + + if (export_format == ECL_FILE) { + fortio_type * restart_fortio = fortio_safe_cast(filestream); + field_export(field , NULL , restart_fortio , export_format , true, NULL); + } else { char * full_path = util_alloc_filename( run_path , file , NULL); - field_export(field , full_path , NULL , export_format , true); + field_export(field , full_path , NULL , export_format , true, NULL); free( full_path ); } } - - bool field_initialize(field_type *field , int iens , const char * init_file , rng_type * rng) { - if (init_file != NULL) { + bool ret = false; + if (init_file) { if (field_fload(field , init_file )) { field_func_type * init_transform = field_config_get_init_transform(field->config); /* @@ -736,16 +796,16 @@ bool field_initialize(field_type *field , int iens , const char * init_file , rn the data, not as the output transform which is done on a copy of prior to export. */ - if (init_transform != NULL) { + if (init_transform) { field_apply(field , init_transform); if (!field_check_finite( field )) util_exit("Sorry: after applying the init transform field:%s contains nan/inf or similar malformed values.\n" , field_config_get_key( field->config )); } - return true; + ret = true; } - } - - return false; /* The field is initialized as part of the forward model. */ + } + + return ret; } @@ -759,8 +819,6 @@ void field_free(field_type *field) { - - void field_serialize(const field_type * field , node_id_type node_id , const active_list_type * active_list , matrix_type * A , int row_offset , int column) { const field_config_type *config = field->config; const int data_size = field_config_get_data_size(config ); @@ -778,38 +836,39 @@ void field_deserialize(field_type * field , node_id_type node_id , const active_ enkf_matrix_deserialize( field->data , data_size , ecl_type , active_list , A , row_offset , column); } - +static int __get_index(const field_type * field, int i, int j, int k) { + return field_config_keep_inactive_cells(field->config) ? field_config_global_index(field->config , i , j , k) : field_config_active_index(field->config , i , j , k); +} void field_ijk_get(const field_type * field , int i , int j , int k , void * value) { - int active_index = field_config_active_index(field->config , i , j , k); + int index = __get_index(field, i, j, k); int sizeof_ctype = field_config_get_sizeof_ctype(field->config); - memcpy(value , &field->data[active_index * sizeof_ctype] , sizeof_ctype); + memcpy(value , &field->data[index * sizeof_ctype] , sizeof_ctype); } double field_ijk_get_double(const field_type * field, int i , int j , int k) { - int active_index = field_config_active_index(field->config , i , j , k); - return field_iget_double( field , active_index ); + int index = __get_index(field, i, j, k); + return field_iget_double( field , index ); } float field_ijk_get_float(const field_type * field, int i , int j , int k) { - int active_index = field_config_active_index(field->config , i , j , k); - return field_iget_float( field , active_index ); + int index = __get_index(field, i, j, k); + return field_iget_float( field , index ); } - /** - Takes an active index as input, and returns a double. + Takes an active or global index as input, and returns a double. */ -double field_iget_double(const field_type * field , int active_index) { +double field_iget_double(const field_type * field , int index) { ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); int sizeof_ctype = field_config_get_sizeof_ctype(field->config); char buffer[8]; /* Enough to hold one double */ - memcpy(buffer , &field->data[active_index * sizeof_ctype] , sizeof_ctype); + memcpy(buffer , &field->data[index * sizeof_ctype] , sizeof_ctype); if ( ecl_type == ECL_DOUBLE_TYPE ) return *((double *) buffer); else if (ecl_type == ECL_FLOAT_TYPE) { @@ -828,13 +887,13 @@ double field_iget_double(const field_type * field , int active_index) { /** - Takes an active index as input, and returns a double. + Takes an active or global index as input, and returns a double. */ -float field_iget_float(const field_type * field , int active_index) { +float field_iget_float(const field_type * field , int index) { ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); int sizeof_ctype = field_config_get_sizeof_ctype(field->config); char buffer[8]; /* Enough to hold one double */ - memcpy(buffer , &field->data[active_index * sizeof_ctype] , sizeof_ctype); + memcpy(buffer , &field->data[index * sizeof_ctype] , sizeof_ctype); if ( ecl_type == ECL_FLOAT_TYPE ) return *((float *) buffer); else if (ecl_type == ECL_DOUBLE_TYPE) { @@ -854,17 +913,16 @@ float field_iget_float(const field_type * field , int active_index) { -double field_iget(const field_type * field, int active_index) { - return field_iget_double(field , active_index); +double field_iget(const field_type * field, int index) { + return field_iget_double(field , index); } - void field_ijk_set(field_type * field , int i , int j , int k , const void * value) { - int active_index = field_config_active_index(field->config , i , j , k); + int index = __get_index(field, i, j, k); int sizeof_ctype = field_config_get_sizeof_ctype(field->config); - memcpy(&field->data[active_index * sizeof_ctype] , value , sizeof_ctype); + memcpy(&field->data[index * sizeof_ctype] , value , sizeof_ctype); } @@ -952,8 +1010,8 @@ double * field_indexed_get_alloc(const field_type * field, int len, const int * bool field_ijk_valid(const field_type * field , int i , int j , int k) { - int active_index = field_config_active_index(field->config , i , j , k); - if (active_index >=0) + int index = __get_index(field, i, j, k); + if (index >=0) return true; else return false; @@ -961,8 +1019,8 @@ bool field_ijk_valid(const field_type * field , int i , int j , int k) { void field_ijk_get_if_valid(const field_type * field , int i , int j , int k , void * value , bool * valid) { - int active_index = field_config_active_index(field->config , i , j , k); - if (active_index >=0) { + int index = __get_index(field, i, j, k); + if (index >=0) { *valid = true; field_ijk_get(field , i , j , k , value); } else @@ -974,6 +1032,9 @@ int field_get_active_index(const field_type * field , int i , int j , int k) { return field_config_active_index(field->config , i , j , k); } +int field_get_global_index(const field_type * field , int i , int j , int k) { + return field_config_global_index(field->config , i , j , k); +} @@ -1003,7 +1064,7 @@ void field_copy_ecl_kw_data(field_type * field , const ecl_kw_type * ecl_kw) { /*****************************************************************/ -bool field_fload_rms(field_type * field , const char * filename) { +bool field_fload_rms(field_type * field , const char * filename, bool keep_inactive) { { FILE * stream = util_fopen__( filename , "r"); if (!stream) @@ -1037,7 +1098,7 @@ bool field_fload_rms(field_type * field , const char * filename) { if (rms_tagkey_get_size(data_tag) != field_config_get_volume(field->config)) util_abort("%s: trying to import rms_data_tag from:%s with wrong size - aborting \n",__func__ , filename); - field_import3D(field , rms_tagkey_get_data_ref(data_tag) , true , ecl_type); + field_import3D(field , rms_tagkey_get_data_ref(data_tag) , true , keep_inactive, ecl_type); rms_tagkey_free(data_tag); rms_file_free(rms_file); } @@ -1046,7 +1107,7 @@ bool field_fload_rms(field_type * field , const char * filename) { -bool field_fload_ecl_kw(field_type * field , const char * filename ) { +static bool field_fload_ecl_kw(field_type * field , const char * filename, bool keep_inactive) { const char * key = field_config_get_ecl_kw_name(field->config); ecl_kw_type * ecl_kw = NULL; @@ -1061,7 +1122,7 @@ bool field_fload_ecl_kw(field_type * field , const char * filename ) { fortio_fclose(fortio); if (field_config_get_volume(field->config) == ecl_kw_get_size(ecl_kw)) - field_import3D(field , ecl_kw_get_void_ptr(ecl_kw) , false , ecl_kw_get_type(ecl_kw)); + field_import3D(field , ecl_kw_get_void_ptr(ecl_kw) , false , keep_inactive, ecl_kw_get_type(ecl_kw)); else /* Keyword is already packed - e.g. from a restart file. Size is verified in the _copy function.*/ @@ -1079,7 +1140,7 @@ bool field_fload_ecl_kw(field_type * field , const char * filename ) { /* No type translation possible */ -bool field_fload_ecl_grdecl(field_type * field , const char * filename ) { +static bool field_fload_ecl_grdecl(field_type * field , const char * filename, bool keep_inactive ) { const char * key = field_config_get_ecl_kw_name(field->config); int size = field_config_get_volume(field->config); ecl_type_enum ecl_type = field_config_get_ecl_type(field->config); @@ -1093,7 +1154,7 @@ bool field_fload_ecl_grdecl(field_type * field , const char * filename ) { util_exit("%s: Can not locate %s keyword in %s \n",__func__ , key , filename); fclose(stream); - field_import3D(field , ecl_kw_get_void_ptr(ecl_kw) , false , ecl_kw_get_type(ecl_kw)); + field_import3D(field , ecl_kw_get_void_ptr(ecl_kw) , false , keep_inactive, ecl_kw_get_type(ecl_kw)); ecl_kw_free(ecl_kw); return true; } @@ -1104,17 +1165,17 @@ bool field_fload_ecl_grdecl(field_type * field , const char * filename ) { -bool field_fload_typed(field_type * field , const char * filename , field_file_format_type file_type) { +bool field_fload_typed(field_type * field , const char * filename , field_file_format_type file_type, bool keep_inactive) { bool loadOK = false; switch (file_type) { case(RMS_ROFF_FILE): - loadOK = field_fload_rms(field , filename ); + loadOK = field_fload_rms(field , filename, keep_inactive ); break; case(ECL_KW_FILE): - loadOK = field_fload_ecl_kw(field , filename ); + loadOK = field_fload_ecl_kw(field , filename, keep_inactive ); break; case(ECL_GRDECL_FILE): - loadOK = field_fload_ecl_grdecl(field , filename); + loadOK = field_fload_ecl_grdecl(field , filename, keep_inactive); break; default: util_abort("%s: file_type:%d not recognized - aborting \n",__func__ , file_type); @@ -1123,24 +1184,33 @@ bool field_fload_typed(field_type * field , const char * filename , field_file_ } - - -bool field_fload(field_type * field , const char * filename ) { +static bool field_fload_custom__(field_type * field , const char * filename , bool keep_inactive) { if (util_file_readable( filename )) { field_file_format_type file_type = field_config_guess_file_type( filename ); - if (file_type == UNDEFINED_FORMAT) + if (file_type == UNDEFINED_FORMAT) file_type = field_config_manual_file_type(filename , true); - - return field_fload_typed(field , filename , file_type); + + return field_fload_typed(field , filename , file_type, keep_inactive); } else return false; } +bool field_fload(field_type * field , const char * filename) { + bool keep_inactive = false; + return field_fload_custom__(field, filename, keep_inactive); +} + + +bool field_fload_keep_inactive(field_type * field , const char * filename) { + bool keep_inactive = true; + return field_fload_custom__(field , filename , keep_inactive); +} + -bool field_fload_auto(field_type * field , const char * filename ) { +bool field_fload_auto(field_type * field , const char * filename, bool keep_inactive ) { field_file_format_type file_type = field_config_guess_file_type(filename); - return field_fload_typed(field , filename , file_type); + return field_fload_typed(field , filename , file_type, keep_inactive); } @@ -1185,8 +1255,13 @@ bool field_cmp(const field_type * f1 , const field_type * f2) { */ -bool field_forward_load(field_type * field , const char * ecl_file_name , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_file , int report_step) { - bool loadOK = true; +static bool field_forward_load(field_type * field , + const char * ecl_file_name , + const ecl_sum_type * ecl_sum, + const ecl_file_type * restart_file , + int report_step) { + bool keep_inactive = false; + bool loadOK = true; field_file_format_type import_format = field_config_get_import_format(field->config); if (import_format == ECL_FILE) { @@ -1198,7 +1273,7 @@ bool field_forward_load(field_type * field , const char * ecl_file_name , const //util_abort("%s: fatal error when loading: %s - no restart information has been loaded \n",__func__ , field_config_get_key( field->config )); } else /* Loading from unique file - currently this only applies to the modelerror implementation. */ - field_fload_typed(field , ecl_file_name , import_format); + field_fload_typed(field , ecl_file_name , import_format, keep_inactive); if (loadOK) { diff --git a/ThirdParty/Ert/devel/libenkf/src/field_config.c b/ThirdParty/Ert/devel/libenkf/src/field_config.c index 70d49c7ea0..9153ad4b48 100644 --- a/ThirdParty/Ert/devel/libenkf/src/field_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/field_config.c @@ -127,6 +127,7 @@ struct field_config_struct { char * ecl_kw_name; /* Name/key ... */ int data_size , nx,ny,nz; /* The number of elements in the three directions. */ + bool keep_inactive_cells; /* Whether the data contains only active cells or active and inactive cells */ ecl_grid_type * grid; /* A shared reference to the grid this field is defined on. */ bool private_grid; @@ -156,9 +157,11 @@ struct field_config_struct { }; +UTIL_IS_INSTANCE_FUNCTION(field_config , FIELD_CONFIG_ID) /*****************************************************************/ + void field_config_set_ecl_kw_name(field_config_type * config , const char * ecl_kw_name) { config->ecl_kw_name = util_realloc_string_copy(config->ecl_kw_name , ecl_kw_name); } @@ -397,10 +400,14 @@ void field_config_set_grid(field_config_type * config, ecl_grid_type * grid , bo config->grid = grid; config->private_grid = private_grid; - ecl_grid_get_dims(grid , &config->nx , &config->ny , &config->nz , &config->data_size); + + ecl_grid_get_dims(grid , &config->nx , &config->ny , &config->nz , NULL); + config->data_size = field_config_get_data_size_from_grid(config); } + + const char * field_config_get_grid_name( const field_config_type * config) { return ecl_grid_get_name( config->grid ); } @@ -410,16 +417,17 @@ const char * field_config_get_grid_name( const field_config_type * config) { /* The return value from this function is hardly usable. */ -field_config_type * field_config_alloc_empty( const char * ecl_kw_name , ecl_grid_type * ecl_grid , field_trans_table_type * trans_table ) { +field_config_type * field_config_alloc_empty( const char * ecl_kw_name , ecl_grid_type * ecl_grid , field_trans_table_type * trans_table, bool keep_inactive_cells ) { field_config_type * config = util_malloc(sizeof *config); UTIL_TYPE_ID_INIT( config , FIELD_CONFIG_ID); - config->ecl_kw_name = util_alloc_string_copy( ecl_kw_name ); - config->private_grid = false; - config->__enkf_mode = true; - config->grid = NULL; - config->write_compressed = true; + config->keep_inactive_cells = keep_inactive_cells; + config->ecl_kw_name = util_alloc_string_copy( ecl_kw_name ); + config->private_grid = false; + config->__enkf_mode = true; + config->grid = NULL; + config->write_compressed = true; config->output_transform = NULL; config->input_transform = NULL; @@ -565,16 +573,11 @@ bool field_config_is_valid( const field_config_type * field_config ) { } - field_type_enum field_config_get_type( const field_config_type * config) { return config->type; } - - - - /* Observe that the indices are zero-based, in contrast to those used by eclipse which are based on one. @@ -588,6 +591,10 @@ inline int field_config_active_index(const field_config_type * config , int i , return ecl_grid_get_active_index3( config->grid , i,j,k); } +inline int field_config_global_index(const field_config_type * config, int i, int j, int k) { + return ecl_grid_get_global_index3( config->grid , i,j,k); +} + /** This function checks that i,j,k are in the intervals [0..nx), @@ -655,11 +662,6 @@ double field_config_get_truncation_max( const field_config_type * config ) { - - - - - void field_config_free(field_config_type * config) { util_safe_free(config->ecl_kw_name); util_safe_free(config->input_transform_name); @@ -689,21 +691,20 @@ ecl_type_enum field_config_get_ecl_type(const field_config_type * config) { -int field_config_get_byte_size(const field_config_type * config) { - return config->data_size * config->sizeof_ctype; +int field_config_get_data_size_from_grid(const field_config_type * config) { + return config->keep_inactive_cells ? ecl_grid_get_global_size(config->grid) : ecl_grid_get_active_size(config->grid); } - - +int field_config_get_byte_size(const field_config_type * config) { + int num_cells = field_config_get_data_size_from_grid(config); + return num_cells * config->sizeof_ctype; +} int field_config_get_sizeof_ctype(const field_config_type * config) { return config->sizeof_ctype; } - - - /** Returns true / false whether a cell is active. */ @@ -717,17 +718,6 @@ bool field_config_active_cell(const field_config_type * config , int i , int j , - - - - - - - - - - - void field_config_get_dims(const field_config_type * config , int *nx , int *ny , int *nz) { *nx = config->nx; *ny = config->ny; @@ -868,6 +858,9 @@ const char * field_config_get_key(const field_config_type * field_config) { return field_config->ecl_kw_name; } +bool field_config_keep_inactive_cells(const field_config_type * config) { + return config->keep_inactive_cells; +} void field_config_enkf_OFF(field_config_type * config) { if (config->__enkf_mode) @@ -982,7 +975,7 @@ int field_config_parse_user_key(const field_config_type * config, const char * i -const ecl_grid_type *field_config_get_grid(const field_config_type * config) { return config->grid; } +ecl_grid_type * field_config_get_grid(const field_config_type * config) { return config->grid; } void field_config_fprintf_config( const field_config_type * config , diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_data.c b/ThirdParty/Ert/devel/libenkf/src/gen_data.c index b0eb282452..fb2a30e108 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_data.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_data.c @@ -24,7 +24,6 @@ #include #include -#include #include #include @@ -41,6 +40,7 @@ #include #include #include +#include /** The file implements a general data type which can be used to update @@ -72,9 +72,6 @@ void gen_data_assert_size( gen_data_type * gen_data , int size , int report_step gen_data->current_report_step = report_step; } - - - gen_data_config_type * gen_data_get_config(const gen_data_type * gen_data) { return gen_data->config; } int gen_data_get_size( const gen_data_type * gen_data ) { @@ -161,7 +158,7 @@ bool gen_data_write_to_buffer(const gen_data_type * gen_data , buffer_type * buf -void gen_data_read_from_buffer(gen_data_type * gen_data , buffer_type * buffer , int report_step, state_enum state) { +void gen_data_read_from_buffer(gen_data_type * gen_data , buffer_type * buffer , enkf_fs_type * fs, int report_step, state_enum state) { int size; enkf_util_assert_buffer_type(buffer , GEN_DATA); size = buffer_fread_int(buffer); @@ -173,7 +170,10 @@ void gen_data_read_from_buffer(gen_data_type * gen_data , buffer_type * buffer , buffer_fread_compressed( buffer , compressed_size , gen_data->data , byte_size ); } gen_data_assert_size( gen_data , size , report_step ); - gen_data_config_load_active( gen_data->config , report_step , false ); + + if (gen_data_config_is_dynamic(gen_data->config)) { + gen_data_config_load_active( gen_data->config , fs, report_step , false ); + } } @@ -214,7 +214,7 @@ static void gen_data_set_data__(gen_data_type * gen_data , int size, int report_ gen_data_assert_size(gen_data , size, report_step); if (gen_data_config_is_dynamic( gen_data->config )) - gen_data_config_update_active( gen_data->config , report_step , gen_data->active_mask); + gen_data_config_update_active( gen_data->config , report_step , gen_data->active_mask); gen_data_realloc_data(gen_data); @@ -236,8 +236,6 @@ static void gen_data_set_data__(gen_data_type * gen_data , int size, int report_ - - /** This functions loads data from file. Observe that there is *NO* header information in this file - the size is determined by seeing @@ -302,8 +300,8 @@ bool gen_data_fload_with_report_step( gen_data_type * gen_data , const char * fi free( active_file ); } } + gen_data_set_data__(gen_data , size , report_step , load_type , buffer ); } - gen_data_set_data__(gen_data , size , report_step , load_type , buffer ); util_safe_free(buffer); return has_file; } @@ -315,22 +313,8 @@ bool gen_data_fload( gen_data_type * gen_data , const char * filename) { - -/** - The gen_data_forward_load() function is called by enkf_node objects - which represent dynamic data. The gen_data objects are very weakly - structured; and in particular we do not know in advance whether a - particular file should be present or not, it is therefor not an - error as such if a file can not be found. For this reason this - function must return true unconditionally, otherwise the scalling - scope will interpret a false return value as an error and signal - load failure. -*/ - - bool gen_data_forward_load(gen_data_type * gen_data , const char * ecl_file , const ecl_sum_type * ecl_sum, const ecl_file_type * restart_file , int report_step) { - gen_data_fload_with_report_step( gen_data , ecl_file , report_step ); - return true; + return gen_data_fload_with_report_step( gen_data , ecl_file , report_step ); } @@ -353,12 +337,13 @@ bool gen_data_forward_load(gen_data_type * gen_data , const char * ecl_file , co bool gen_data_initialize(gen_data_type * gen_data , int iens , const char * init_file , rng_type * rng) { - if (init_file != NULL) { + bool ret = false; + if (init_file) { if (!gen_data_fload_with_report_step(gen_data , init_file , 0)) util_abort("%s: could not find file:%s \n",__func__ , init_file); - return true; - } else - return false; /* No init performed ... */ + ret = true; + } + return ret; } @@ -446,12 +431,12 @@ void gen_data_export(const gen_data_type * gen_data , const char * full_path , g */ -void gen_data_ecl_write(const gen_data_type * gen_data , const char * run_path , const char * eclfile , fortio_type * fortio) { +void gen_data_ecl_write(const gen_data_type * gen_data , const char * run_path , const char * eclfile , void * filestream) { if (eclfile != NULL) { char * full_path = util_alloc_filename( run_path , eclfile , NULL); gen_data_file_format_type export_type = gen_data_config_get_output_format( gen_data->config ); - gen_data_export( gen_data , full_path , export_type , fortio ); + gen_data_export( gen_data , full_path , export_type , filestream ); free( full_path ); } } @@ -637,8 +622,23 @@ const bool_vector_type * gen_data_get_forward_mask( const gen_data_type * gen_da return gen_data_config_get_active_mask( gen_data->config ); } +void gen_data_copy_to_double_vector(const gen_data_type * gen_data , double_vector_type * vector){ + const ecl_type_enum internal_type = gen_data_config_get_internal_type(gen_data->config); + int size = gen_data_get_size( gen_data ); + if (internal_type == ECL_FLOAT_TYPE) { + float * data = (float *) gen_data->data; + double_vector_reset(vector); + for (int i = 0; i < size; i++){ + double_vector_append(vector , data[i]); + } + } else if (internal_type == ECL_DOUBLE_TYPE) { + double * data = (double *) gen_data->data; + double_vector_memcpy_from_data( vector , data , size ); + } +} + #define INFLATE(inf,std,min) \ { \ for (int i=0; i < data_size; i++) { \ diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_data_config.c b/ThirdParty/Ert/devel/libenkf/src/gen_data_config.c index 3f496faba2..e32a5cc0ec 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_data_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_data_config.c @@ -24,9 +24,10 @@ #include #include #include +#include +#include #include - #include #include @@ -65,7 +66,7 @@ struct gen_data_config_struct { gen_data_file_format_type input_format; /* The format used for loading gen_data instances when the forward model has completed *AND* for loading the initial files.*/ gen_data_file_format_type output_format; /* The format used when gen_data instances are written to disk for the forward model. */ int_vector_type * data_size_vector; /* Data size, i.e. number of elements , indexed with report_step */ - bool update_valid; + int_vector_type * active_report_steps; /* The report steps where we expect to load data for this instance. */ pthread_mutex_t update_lock; /*****************************************************************/ /* All the fields below this line are related to the capability of @@ -73,8 +74,9 @@ struct gen_data_config_struct { instance. See documentation above. */ bool dynamic; - enkf_fs_type * fs; /* NBNB This will be NULL in the case of instances which are used as parameters. */ - int ens_size; + enkf_fs_type * read_fs; /* NBNB This will be NULL in the case of instances which are used as parameters. */ + enkf_fs_type * write_fs; + int ens_size; bool mask_modified; bool_vector_type * active_mask; int active_report_step; @@ -83,7 +85,8 @@ struct gen_data_config_struct { /*****************************************************************/ -UTIL_SAFE_CAST_FUNCTION(gen_data_config , GEN_DATA_CONFIG_ID) +UTIL_IS_INSTANCE_FUNCTION(gen_data_config , GEN_DATA_CONFIG_ID) +UTIL_SAFE_CAST_FUNCTION(gen_data_config , GEN_DATA_CONFIG_ID) UTIL_SAFE_CAST_FUNCTION_CONST(gen_data_config , GEN_DATA_CONFIG_ID) gen_data_file_format_type gen_data_config_get_input_format ( const gen_data_config_type * config) { return config->input_format; } @@ -126,7 +129,22 @@ int gen_data_config_get_byte_size( const gen_data_config_type * config , int rep -gen_data_config_type * gen_data_config_alloc_empty( const char * key ) { +static void gen_data_config_reset_template( gen_data_config_type * config ) { + util_safe_free( config->template_buffer ); + util_safe_free( config->template_key ); + util_safe_free( config->template_file ); + + config->template_file = NULL; + config->template_buffer = NULL; + config->template_key = NULL; + config->template_data_offset = 0; + config->template_data_skip = 0; + config->template_buffer_size = 0; +} + + + +static gen_data_config_type * gen_data_config_alloc( const char * key , bool dynamic ) { gen_data_config_type * config = util_malloc(sizeof * config ); UTIL_TYPE_ID_INIT( config , GEN_DATA_CONFIG_ID); @@ -135,26 +153,67 @@ gen_data_config_type * gen_data_config_alloc_empty( const char * key ) { config->template_file = NULL; config->template_key = NULL; config->template_buffer = NULL; - config->template_data_offset = 0; - config->template_buffer_size = 0; - config->template_data_skip = 0; + gen_data_config_reset_template( config ); config->data_size = 0; config->internal_type = ECL_DOUBLE_TYPE; config->input_format = GEN_DATA_UNDEFINED; config->output_format = GEN_DATA_UNDEFINED; config->data_size_vector = int_vector_alloc( 0 , -1 ); /* The default value: -1 - indicates "NOT SET" */ - config->update_valid = false; + config->active_report_steps= int_vector_alloc( 0 , 0 ); config->active_mask = bool_vector_alloc(0 , true ); /* Elements are explicitly set to FALSE - this MUST default to true. */ config->active_report_step = -1; config->ens_size = -1; - config->fs = NULL; - config->dynamic = false; + config->read_fs = NULL; + config->write_fs = NULL; + config->dynamic = dynamic; pthread_mutex_init( &config->update_lock , NULL ); + return config; } +gen_data_config_type * gen_data_config_alloc_GEN_PARAM( const char * key , gen_data_file_format_type output_format , gen_data_file_format_type input_format) { + gen_data_config_type * config = gen_data_config_alloc( key , false ); + + if (input_format == ASCII_TEMPLATE) + util_abort("%s: Sorry can not use INPUT_FORMAT:ASCII_TEMPLATE\n",__func__); + + if (output_format == GEN_DATA_UNDEFINED || input_format == GEN_DATA_UNDEFINED) + util_abort("%s: Sorry must specify valid values for both input and output format\n",__func__); + + config->output_format = output_format; + config->input_format = input_format; + return config; +} + + +gen_data_config_type * gen_data_config_alloc_GEN_DATA_result( const char * key , gen_data_file_format_type input_format) { + gen_data_config_type * config = gen_data_config_alloc( key , true ); + + if (input_format == ASCII_TEMPLATE) + util_abort("%s: Sorry can not use INPUT_FORMAT:ASCII_TEMPLATE\n",__func__); + + if (input_format == GEN_DATA_UNDEFINED) + util_abort("%s: Sorry must specify valid values for input format.\n",__func__); + + config->input_format = input_format; + return config; +} + +gen_data_config_type * gen_data_config_alloc_GEN_DATA_state( const char * key , gen_data_file_format_type output_format , gen_data_file_format_type input_format) { + gen_data_config_type * config = gen_data_config_alloc( key , true ); + + if (input_format == ASCII_TEMPLATE) + util_abort("%s: Sorry can not use INPUT_FORMAT:ASCII_TEMPLATE\n",__func__); + + if (output_format == GEN_DATA_UNDEFINED || input_format == GEN_DATA_UNDEFINED) + util_abort("%s: Sorry must specify valid values for both input and output format\n",__func__); + + config->output_format = output_format; + config->input_format = input_format; + return config; +} const bool_vector_type * gen_data_config_get_active_mask( const gen_data_config_type * config ) { @@ -165,31 +224,55 @@ const bool_vector_type * gen_data_config_get_active_mask( const gen_data_config_ } -static void gen_data_config_set_template( gen_data_config_type * config , const char * template_ecl_file , const char * template_data_key ) { - util_safe_free( config->template_buffer ); - config->template_buffer = NULL; - if (template_ecl_file != NULL) { - char *data_ptr; - config->template_buffer = util_fread_alloc_file_content( template_ecl_file , &config->template_buffer_size); - if (template_data_key != NULL) { - data_ptr = strstr(config->template_buffer , template_data_key); - if (data_ptr == NULL) - util_abort("%s: template:%s can not be used - could not find data key:%s \n",__func__ , template_ecl_file , template_data_key); - else { - config->template_data_offset = data_ptr - config->template_buffer; - config->template_data_skip = strlen( template_data_key ); + + +bool gen_data_config_set_template( gen_data_config_type * config , const char * template_ecl_file , const char * template_data_key ) { + char * template_buffer = NULL; + bool template_valid = true; + int template_buffer_size; + + if (template_ecl_file) { + if (util_file_readable( template_ecl_file )) { + template_buffer = util_fread_alloc_file_content( template_ecl_file , &template_buffer_size); + if (template_data_key) { + if (strstr(template_buffer , template_data_key) == NULL) + template_valid = false; } - } else { /* We are using a template without a template_data_key - the - data is assumed to come at the end of the template. */ - config->template_data_offset = strlen( config->template_buffer ); - config->template_data_skip = 0; - } - } else - config->template_buffer = NULL; + } else + template_valid = false; + } - config->template_file = util_realloc_string_copy( config->template_file , template_ecl_file ); - config->template_key = util_realloc_string_copy( config->template_key , template_data_key ); + if (template_valid) { + + gen_data_config_reset_template(config); + if (template_ecl_file != NULL) { + char *data_ptr; + config->template_buffer = template_buffer; + config->template_buffer_size = template_buffer_size; + if (template_data_key != NULL) { + data_ptr = strstr(config->template_buffer , template_data_key); + if (data_ptr == NULL) + util_abort("%s: template:%s can not be used - could not find data key:%s \n",__func__ , template_ecl_file , template_data_key); + else { + config->template_data_offset = data_ptr - config->template_buffer; + config->template_data_skip = strlen( template_data_key ); + } + } else { /* We are using a template without a template_data_key - the + data is assumed to come at the end of the template. */ + config->template_data_offset = strlen( config->template_buffer ); + config->template_data_skip = 0; + } + + config->template_file = util_realloc_string_copy( config->template_file , template_ecl_file ); + config->template_key = util_realloc_string_copy( config->template_key , template_data_key ); + + if (config->output_format != ASCII_TEMPLATE) + fprintf(stderr,"**WARNING: The template settings will ignored for key:%s - use OUTPUT_FORMAT:ASCII_TEMPLATE to get template behaviour\n", config->key); + } + + } + return template_valid; } @@ -202,68 +285,9 @@ const char * gen_data_config_get_template_key( const gen_data_config_type * conf } -static void gen_data_config_set_io_format( gen_data_config_type * config , gen_data_file_format_type output_format , gen_data_file_format_type input_format) { - - config->output_format = output_format; - config->input_format = input_format; -} - - -bool gen_data_config_is_valid( const gen_data_config_type * gen_data_config) { - return gen_data_config->update_valid; -} -/** - Observe that all the consistency checks are in this functions, and - not in the various small static functions called by this function, - it is therefor important that only this full function is used, and - not the small individual (static for a reason ...) functions. - - Observe that the checks on == NULL and != NULL for the various parameters - should already have been performed (in enkf_config_node_update_gen_data). -*/ - -void gen_data_config_update(gen_data_config_type * config , - enkf_var_type var_type , /* This is ONLY included too be able to do a sensible consistency check. */ - gen_data_file_format_type input_format , - gen_data_file_format_type output_format , - const char * template_ecl_file , - const char * template_data_key) { - bool valid = true; - - if ((var_type != DYNAMIC_RESULT) && (output_format == GEN_DATA_UNDEFINED)) - valid = false; - //util_abort("%s: When specifying an enkf output file you must specify an output format as well. \n",__func__); - - if ((var_type != PARAMETER) && (input_format == GEN_DATA_UNDEFINED)) - valid = false; - //util_abort("%s: When specifying a file for ERT to load from - you must also specify the format of the loaded files. \n",__func__); - - if (input_format == ASCII_TEMPLATE) - valid = false; - //util_abort("%s: Format ASCII_TEMPLATE is not valid as INPUT_FORMAT \n",__func__); - - if ((template_ecl_file != NULL) && (template_data_key == NULL)) - valid = false; - //util_abort("%s: When using a template you MUST also set a template_key \n",__func__); - - if ((output_format == ASCII_TEMPLATE) && (template_ecl_file == NULL)) - valid = false; - // When using format ASCII_TEMPLATE you also must set a template file. - - /*****************************************************************/ - if (valid) { - gen_data_config_set_template( config , template_ecl_file , template_data_key ); - gen_data_config_set_io_format( config , output_format , input_format); - - if ((output_format == ASCII_TEMPLATE) && (config->template_buffer == NULL)) - valid = false; - //util_abort("%s: When specifying output_format == ASCII_TEMPLATE you must also supply a template_ecl_file\n",__func__); - } - config->update_valid = valid; -} @@ -292,8 +316,6 @@ gen_data_file_format_type gen_data_config_check_format( const void * format_stri else if (strcmp(format_string , "BINARY_FLOAT") == 0) type = BINARY_FLOAT; - if (type == GEN_DATA_UNDEFINED) - util_exit("Sorry: format:\"%s\" not recognized - valid values: ASCII / ASCII_TEMPLATE / BINARY_DOUBLE / BINARY_FLOAT \n", format_string); } return type; @@ -317,6 +339,7 @@ gen_data_file_format_type gen_data_config_check_format( const void * format_stri void gen_data_config_free(gen_data_config_type * config) { int_vector_free( config->data_size_vector ); + int_vector_free( config->active_report_steps ); util_safe_free( config->key ); util_safe_free( config->template_buffer ); @@ -379,7 +402,7 @@ void gen_data_config_assert_size(gen_data_config_type * config , int data_size, This MUST be called after gen_data_config_assert_size(). */ -void gen_data_config_update_active(gen_data_config_type * config , int report_step , const bool_vector_type * data_mask) { +void gen_data_config_update_active(gen_data_config_type * config, int report_step , const bool_vector_type * data_mask) { pthread_mutex_lock( &config->update_lock ); { if ( int_vector_iget( config->data_size_vector , report_step ) > 0) { @@ -407,7 +430,7 @@ void gen_data_config_update_active(gen_data_config_type * config , int report_st i.e. we update the on-disk representation. */ char * filename = util_alloc_sprintf("%s_active" , config->key ); - FILE * stream = enkf_fs_open_case_tstep_file( config->fs , filename , report_step , "w"); + FILE * stream = enkf_fs_open_case_tstep_file( config->write_fs , filename , report_step , "w"); bool_vector_fwrite( config->active_mask , stream ); @@ -422,28 +445,67 @@ void gen_data_config_update_active(gen_data_config_type * config , int report_st } +bool gen_data_config_has_active_mask( const gen_data_config_type * config , enkf_fs_type * fs , int report_step) { + bool has_mask; + { + char * filename = util_alloc_sprintf("%s_active" , config->key ); + FILE * stream = enkf_fs_open_excase_tstep_file( fs , filename , report_step); + + if (stream == NULL) + has_mask = false; + else { + has_mask = true; + fclose( stream ); + } + + free( filename ); + } + return has_mask; +} + /** This function will load an active map from the enkf_fs filesystem. */ -void gen_data_config_load_active( gen_data_config_type * config , int report_step , bool force_load) { - if (config->fs == NULL) +void gen_data_config_load_active( gen_data_config_type * config , enkf_fs_type * fs, int report_step , bool force_load) { + + + bool fs_changed = false; + if (fs != config->read_fs) { + config->read_fs = fs; + fs_changed = true; + } + + if (!config->dynamic) return; /* This is used as a GEN_PARAM instance - and the loading of mask is not an option. */ - pthread_mutex_lock( &config->update_lock ); { if ( force_load || (int_vector_iget( config->data_size_vector , report_step ) > 0)) { - if (config->active_report_step != report_step) { + if (config->active_report_step != report_step || fs_changed) { char * filename = util_alloc_sprintf("%s_active" , config->key ); - FILE * stream = enkf_fs_open_excase_tstep_file( config->fs , filename , report_step); + FILE * stream = enkf_fs_open_excase_tstep_file( fs , filename , report_step); if (stream != NULL) { bool_vector_fread( config->active_mask , stream ); fclose( stream ); - } else - fprintf(stderr,"** Warning: could not find file:%s \n",filename); - + } else { + int gen_data_size = int_vector_safe_iget( config->data_size_vector, report_step ); + if (gen_data_size < 0) { + fprintf(stderr,"** Fatal internal error in function:%s \n",__func__); + fprintf(stderr,"\n"); + fprintf(stderr," 1: The active mask file:%s was not found \n",filename); + fprintf(stderr," 2: The size of the gen_data vectors has not been set\n"); + fprintf(stderr,"\n"); + fprintf(stderr,"We can not create a suitable active_mask. Code should call gen_data_config_has_active_mask()\n\n"); + + util_abort("%s: fatal internal error - could not create a suitable active_mask \n",__func__); + } else { + fprintf(stdout,"** Info: could not locate active data elements file %s, filling active vector with true all elements active \n",filename); + bool_vector_reset( config->active_mask ); + bool_vector_iset( config->active_mask, gen_data_size - 1, true); + } + } free( filename ); } } @@ -452,16 +514,45 @@ void gen_data_config_load_active( gen_data_config_type * config , int report_ste pthread_mutex_unlock( &config->update_lock ); } +int gen_data_config_num_report_step( const gen_data_config_type * config ) { + return int_vector_size( config->active_report_steps ); +} + +bool gen_data_config_has_report_step( const gen_data_config_type * config , int report_step) { + return int_vector_contains_sorted( config->active_report_steps , report_step ); +} + +void gen_data_config_add_report_step( gen_data_config_type * config , int report_step) { + if (config->dynamic) { + if (!gen_data_config_has_report_step( config , report_step)) { + int_vector_append( config->active_report_steps , report_step ); + int_vector_sort( config->active_report_steps ); + } + } +} + +int gen_data_config_iget_report_step( const gen_data_config_type *config , int index) { + return int_vector_iget( config->active_report_steps , index ); +} +void gen_data_config_set_active_report_steps_from_string( gen_data_config_type *config , const char * range_string) { + if (config->dynamic) { + int_vector_reset( config->active_report_steps ); + string_util_update_active_list(range_string , config->active_report_steps ); + } +} + + +const int_vector_type * gen_data_config_get_active_report_steps( const gen_data_config_type *config) { + return config->active_report_steps; +} void gen_data_config_set_ens_size( gen_data_config_type * config , int ens_size) { config->ens_size = ens_size; } - -void gen_data_config_set_dynamic( gen_data_config_type * config , enkf_fs_type * fs) { - config->dynamic = true; - config->fs = fs; +void gen_data_config_set_write_fs(gen_data_config_type * config, enkf_fs_type * write_fs) { + config->write_fs = write_fs; } @@ -483,9 +574,20 @@ void gen_data_config_get_template_data( const gen_data_config_type * config , } - - - +bool gen_data_config_valid_result_format(const char * result_file_fmt) { + if (result_file_fmt) { + if (util_is_abs_path( result_file_fmt )) + return false; + else { + if (util_int_format_count(result_file_fmt) == 1) + return true; + else + return false; + } + } else + return false; +} + const char * gen_data_config_get_key( const gen_data_config_type * config) { return config->key; diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_kw.c b/ThirdParty/Ert/devel/libenkf/src/gen_kw.c index 2a58c09aea..8eea08127b 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_kw.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_kw.c @@ -24,7 +24,6 @@ #include #include #include -#include #include #include @@ -34,6 +33,7 @@ #include #include #include +#include GET_DATA_SIZE_HEADER(gen_kw); @@ -88,6 +88,59 @@ void gen_kw_copy(const gen_kw_type * src , gen_kw_type * target) { +int gen_kw_data_size( gen_kw_type * gen_kw ) { + return gen_kw_config_get_data_size( gen_kw->config ); +} + + + +double gen_kw_data_iget( gen_kw_type * gen_kw, int index , bool do_transform ) +{ + double value; + int size = gen_kw_config_get_data_size( gen_kw->config ); + if (( index < 0 ) || ( index >= size )) + util_abort( "%s: index:%d invalid. Valid interval: [0,%d>.\n" , __func__ , index , size ); + + if (do_transform) { + value = gen_kw_config_transform(gen_kw->config, index, gen_kw->data[index]); + } + else { + value = gen_kw->data[index]; + } + + return value; +} + + +void gen_kw_data_iset( gen_kw_type * gen_kw, int index , double value ) +{ + int size = gen_kw_config_get_data_size( gen_kw->config ); + if (( index < 0 ) || ( index >= size )) + util_abort( "%s: index:%d invalid. Valid interval: [0,%d>.\n" , __func__ , index , size ); + + gen_kw->data[index] = value; +} + + +double gen_kw_data_get( gen_kw_type * gen_kw, const char * subkey, bool do_transform ) +{ + int index = gen_kw_config_get_index(gen_kw->config, subkey); + return gen_kw_data_iget(gen_kw, index, do_transform); +} + +void gen_kw_data_set( gen_kw_type * gen_kw, const char * subkey, double value ) +{ + int index = gen_kw_config_get_index(gen_kw->config, subkey); + return gen_kw_data_iset(gen_kw, index, value); +} + + +bool gen_kw_data_has_key( gen_kw_type * gen_kw, const char * subkey ) +{ + int index = gen_kw_config_get_index(gen_kw->config, subkey); + bool has_key = ((0 <= index) && (gen_kw_data_size(gen_kw) > index))? true : false; + return has_key; +} bool gen_kw_write_to_buffer(const gen_kw_type *gen_kw , buffer_type * buffer, int report_step, state_enum state) { const int data_size = gen_kw_config_get_data_size( gen_kw->config ); @@ -108,7 +161,7 @@ bool gen_kw_write_to_buffer(const gen_kw_type *gen_kw , buffer_type * buffer, i #define MULTFLT 102 -void gen_kw_read_from_buffer(gen_kw_type * gen_kw , buffer_type * buffer, int report_step, state_enum state) { +void gen_kw_read_from_buffer(gen_kw_type * gen_kw , buffer_type * buffer, enkf_fs_type * fs, int report_step, state_enum state) { const int data_size = gen_kw_config_get_data_size( gen_kw->config ); ert_impl_type file_type; file_type = buffer_fread_int(buffer); @@ -125,8 +178,13 @@ void gen_kw_truncate(gen_kw_type * gen_kw) { bool gen_kw_initialize(gen_kw_type *gen_kw , int iens , const char * init_file , rng_type * rng ) { - if (init_file != NULL) - gen_kw_fload(gen_kw , init_file ); + if (!init_file && !rng) + util_abort("%s internal error: both init_file and rng are NULL", __func__); + + bool ret = false; + + if (init_file) + ret = gen_kw_fload(gen_kw , init_file ); else { const double mean = 0.0; /* Mean and std are hardcoded - the variability should be in the transformation. */ const double std = 1.0; @@ -135,9 +193,10 @@ bool gen_kw_initialize(gen_kw_type *gen_kw , int iens , const char * init_file , for (i=0; i < data_size; i++) gen_kw->data[i] = enkf_util_rand_normal(mean , std , rng); - + + ret = true; } - return true; + return ret; } @@ -183,10 +242,35 @@ void gen_kw_filter_file(const gen_kw_type * gen_kw , const char * target_file) { } -void gen_kw_ecl_write(const gen_kw_type * gen_kw , const char * run_path , const char * base_file , fortio_type * fortio) { - char * target_file = util_alloc_filename( run_path , base_file , NULL); - gen_kw_filter_file(gen_kw , target_file); - free( target_file ); +void gen_kw_write_export_file(const gen_kw_type * gen_kw, FILE * filestream) { + const int size = gen_kw_config_get_data_size(gen_kw->config ); + int ikw; + + for (ikw = 0; ikw < size; ++ikw) { + const char * key = gen_kw_config_get_key(gen_kw->config); + const char * parameter = gen_kw_config_iget_name(gen_kw->config , ikw); + int width = 60 - (strlen(key) + strlen(parameter) + 1); + double transformed_value = gen_kw_config_transform( gen_kw->config , ikw , gen_kw->data[ikw] ); + const char * print_string = util_alloc_sprintf("%s:%s %e\n", key, parameter, width, transformed_value); + fprintf(filestream, print_string); + } +} + +void gen_kw_ecl_write_template(const gen_kw_type * gen_kw , const char * file_name){ + gen_kw_filter_file(gen_kw , file_name); +} + + +void gen_kw_ecl_write(const gen_kw_type * gen_kw , const char * run_path , const char * base_file , void * filestream) { + if (fortio_is_instance(filestream)) { + util_abort("%s: Called with fortio instance, aborting\n", __func__); + } else { + gen_kw_write_export_file(gen_kw, filestream); + + char * target_file = util_alloc_filename( run_path , base_file , NULL); + gen_kw_filter_file(gen_kw , target_file); + free( target_file ); + } } diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_kw_config.c b/ThirdParty/Ert/devel/libenkf/src/gen_kw_config.c index 6ed9ce2fdd..23c23f416d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_kw_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_kw_config.c @@ -214,7 +214,10 @@ double gen_kw_config_transform(const gen_kw_config_type * config , int index, do return trans_func_eval( parameter->trans_func , x); } - +bool gen_kw_config_should_use_log_scale(const gen_kw_config_type * config, int index) { + const gen_kw_parameter_type * parameter = vector_iget_const( config->parameters , index ); + return trans_func_use_log_scale( parameter->trans_func); +} void gen_kw_config_free(gen_kw_config_type * gen_kw_config) { util_safe_free( gen_kw_config->key ); diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_obs.c b/ThirdParty/Ert/devel/libenkf/src/gen_obs.c index 0e05394fe5..8eb71ea6e9 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_obs.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_obs.c @@ -38,6 +38,7 @@ #include #include + /** This file implemenets a structure for general observations. A general observation is just a vector of numbers - where EnKF has no @@ -282,7 +283,7 @@ void gen_obs_measure(const gen_obs_type * gen_obs , const gen_data_type * gen_da if (!bool_vector_iget( forward_model_active , data_index )) continue; /* Forward model has deactivated this index - just continue. */ } - meas_block_iset( meas_block , node_id.iens , iobs , gen_data_iget_double( gen_data , gen_obs->data_index_list[iobs] )); + meas_block_iset( meas_block , node_id.iens , index , gen_data_iget_double( gen_data , gen_obs->data_index_list[iobs] )); } } } @@ -290,13 +291,17 @@ void gen_obs_measure(const gen_obs_type * gen_obs , const gen_data_type * gen_da -void gen_obs_get_observations(gen_obs_type * gen_obs , obs_data_type * obs_data, int report_step , const active_list_type * __active_list) { - gen_data_config_load_active( gen_obs->data_config , report_step , true); +void gen_obs_get_observations(gen_obs_type * gen_obs , obs_data_type * obs_data, enkf_fs_type * fs, int report_step , const active_list_type * __active_list) { + const bool_vector_type * forward_model_active = NULL; + if (gen_data_config_has_active_mask( gen_obs->data_config , fs, report_step)) { + gen_data_config_load_active( gen_obs->data_config , fs, report_step , true); + forward_model_active = gen_data_config_get_active_mask( gen_obs->data_config ); + } + { int iobs; active_mode_type active_mode = active_list_get_mode( __active_list ); obs_block_type * obs_block = obs_data_add_block( obs_data , gen_obs->obs_key , gen_obs->obs_size , NULL , false); - const bool_vector_type * forward_model_active = gen_data_config_get_active_mask( gen_obs->data_config ); if (active_mode == ALL_ACTIVE) { for (iobs = 0; iobs < gen_obs->obs_size; iobs++) @@ -422,7 +427,28 @@ void gen_obs_scale_std__(void * gen_obs, double std_multiplier) { gen_obs_scale_std(observation, std_multiplier); } +int gen_obs_get_size(const gen_obs_type * gen_obs){ + return gen_obs->obs_size; +} + +double gen_obs_iget_std(const gen_obs_type * gen_obs, int index){ + return gen_obs->obs_std[index]; +} + +double gen_obs_iget_data(const gen_obs_type * gen_obs, int index){ + return gen_obs->obs_data[index]; +} +int gen_obs_get_obs_index(const gen_obs_type * gen_obs, int index){ + if(index < 0 || index >= gen_obs->obs_size){ + util_abort("[Gen_Obs] Index out of bounds %d [0, %d]", index, gen_obs->obs_size - 1); + } + if (gen_obs->observe_all_data){ + return index; + } else { + return gen_obs->data_index_list[index]; + } +} diff --git a/ThirdParty/Ert/devel/libenkf/src/misfit_ensemble.c b/ThirdParty/Ert/devel/libenkf/src/misfit_ensemble.c index 3e81d8e208..3c1e3b599e 100644 --- a/ThirdParty/Ert/devel/libenkf/src/misfit_ensemble.c +++ b/ThirdParty/Ert/devel/libenkf/src/misfit_ensemble.c @@ -77,9 +77,17 @@ static void __2d_free(double ** d , int rows) { } -void misfit_ensemble_update( misfit_ensemble_type * misfit_ensemble , const ensemble_config_type * ensemble_config , const enkf_obs_type * enkf_obs , enkf_fs_type * fs , int ens_size , int history_length) { - misfit_ensemble_clear( misfit_ensemble ); - { +void misfit_ensemble_initialize( misfit_ensemble_type * misfit_ensemble , + const ensemble_config_type * ensemble_config , + const enkf_obs_type * enkf_obs , + enkf_fs_type * fs , + int ens_size , + int history_length, + bool force_init) { + + if (force_init || !misfit_ensemble->initialized) { + misfit_ensemble_clear( misfit_ensemble ); + state_enum cmp_state = FORECAST; msg_type * msg = msg_alloc("Evaluating misfit for observation: " , false); double ** chi2_work = __2d_malloc( history_length + 1 , ens_size ); @@ -200,7 +208,6 @@ void misfit_ensemble_fread( misfit_ensemble_type * misfit_ensemble , FILE * stre } } - misfit_ensemble->initialized = true; } diff --git a/ThirdParty/Ert/devel/libenkf/src/misfit_ranking.c b/ThirdParty/Ert/devel/libenkf/src/misfit_ranking.c index f21f42d939..cc8551c2fd 100644 --- a/ThirdParty/Ert/devel/libenkf/src/misfit_ranking.c +++ b/ThirdParty/Ert/devel/libenkf/src/misfit_ranking.c @@ -174,7 +174,7 @@ static misfit_ranking_type * misfit_ranking_alloc_empty( int ens_size ) { Step and step2 are inclusive. The time direction is flattened. */ -misfit_ranking_type * misfit_ranking_alloc(const misfit_ensemble_type * misfit_ensemble , const stringlist_type * sort_keys , int step1 , int step2, const char * ranking_key) { +misfit_ranking_type * misfit_ranking_alloc(const misfit_ensemble_type * misfit_ensemble , const stringlist_type * sort_keys , const int_vector_type * steps, const char * ranking_key) { const int ens_size = misfit_ensemble_get_ens_size( misfit_ensemble ); int iens; misfit_ranking_type * ranking = misfit_ranking_alloc_empty(ens_size); @@ -190,7 +190,7 @@ misfit_ranking_type * misfit_ranking_alloc(const misfit_ensemble_type * misfit_ const char * obs_key = stringlist_iget( sort_keys , ikey ); if (misfit_member_has_ts( misfit_member , obs_key )) { misfit_ts_type * ts = misfit_member_get_ts( misfit_member , obs_key ); - double value = misfit_ts_eval( ts , step1 , step2 ); /* Sum up the misfit for this key - and these timesteps. */ + double value = misfit_ts_eval( ts , steps ); /* Sum up the misfit for this key - and these timesteps. */ hash_insert_double( obs_hash , obs_key , value); total += value; } else diff --git a/ThirdParty/Ert/devel/libenkf/src/misfit_ts.c b/ThirdParty/Ert/devel/libenkf/src/misfit_ts.c index 964301ea78..e0b4655387 100644 --- a/ThirdParty/Ert/devel/libenkf/src/misfit_ts.c +++ b/ThirdParty/Ert/devel/libenkf/src/misfit_ts.c @@ -20,6 +20,7 @@ #include #include #include +#include #include @@ -85,12 +86,14 @@ void misfit_ts_iset( misfit_ts_type * vector , int time_index , double value ) { } /** Step2 is inclusive - what a fucking mess. */ -double misfit_ts_eval( const misfit_ts_type * vector , int step1 , int step2 ) { +double misfit_ts_eval( const misfit_ts_type * vector , const int_vector_type * steps) { double misfit_sum = 0; int step; - - for (step = step1; step <= step2; step++) + + for (int i = 0; i < int_vector_size(steps); ++i) { + step = int_vector_iget(steps, i); misfit_sum += double_vector_iget(vector->data , step ); + } return misfit_sum; } diff --git a/ThirdParty/Ert/devel/libenkf/src/model_config.c b/ThirdParty/Ert/devel/libenkf/src/model_config.c index 5460c6823f..00c0ba6350 100644 --- a/ThirdParty/Ert/devel/libenkf/src/model_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/model_config.c @@ -46,6 +46,7 @@ #include #include #include +#include /** This struct contains configuration which is specific to this @@ -68,10 +69,8 @@ is selected with model_config_select_runpath(). However this implementation is quite different from the way manipulation of the runpath is exposed to the user: The runpath is controlled through - the RUNPATH config key (key DEFAULT_RUNPATH_KEY in the hash table), - and the optional RERUN_PATH config key (key RERUN_PATH_KEY in the - hash table). These two semantically predefined runpaths are the two - only options visible to the user. + the RUNPATH config key (key DEFAULT_RUNPATH_KEY in the hash table) + This semantically predefined runpath is the only option visible to the user. */ #define MODEL_CONFIG_TYPE_ID 661053 @@ -80,6 +79,7 @@ struct model_config_struct { stringlist_type * case_names; /* A list of "iens -> name" mappings - can be NULL. */ char * case_table_file; forward_model_type * forward_model; /* The forward_model - as loaded from the config file. Each enkf_state object internalizes its private copy of the forward_model. */ + time_map_type * external_time_map; history_type * history; /* The history object. */ path_fmt_type * current_runpath; /* path_fmt instance for runpath - runtime the call gets arguments: (iens, report_step1 , report_step2) - i.e. at least one %d must be present.*/ char * current_path_key; @@ -96,9 +96,11 @@ struct model_config_struct { history_source_type history_source; const ecl_sum_type * refcase; /* A pointer to the refcase - can be NULL. Observe that this ONLY a pointer to the ecl_sum instance owned and held by the ecl_config object. */ + char * gen_kw_export_file_name; + /** The results are always loaded. */ bool_vector_type * internalize_state; /* Should the (full) state be internalized (at this report_step). */ - bool_vector_type * __load_state; /* Internal variable: is it necessary to load the state? */ + bool_vector_type * __load_eclipse_restart; /* Internal variable: is it necessary to load the state? */ }; @@ -116,9 +118,16 @@ path_fmt_type * model_config_get_runpath_fmt(const model_config_type * model_con return model_config->current_runpath; } - const char * model_config_get_runpath_as_char( const model_config_type * model_config ) { +const char * model_config_get_runpath_as_char( const model_config_type * model_config ) { return path_fmt_get_fmt( model_config->current_runpath ); - } +} + +bool model_config_runpath_requires_iter( const model_config_type * model_config ) { + if (util_int_format_count( model_config_get_runpath_as_char( model_config)) > 1 ) + return true; + else + return false; +} const char * model_config_get_case_table_file( const model_config_type * model_config ) { @@ -197,6 +206,15 @@ void model_config_set_runpath(model_config_type * model_config , const char * fm +void model_config_set_gen_kw_export_file( model_config_type * model_config, const char * file_name) { + model_config->gen_kw_export_file_name = util_realloc_string_copy( model_config->gen_kw_export_file_name , file_name ); +} + +const char * model_config_get_gen_kw_export_file( const model_config_type * model_config) { + return model_config->gen_kw_export_file_name; +} + + /** This function is not called at bootstrap time, but rather as part of an initialization just before the run. Can be called maaaanye @@ -213,7 +231,7 @@ void model_config_set_runpath(model_config_type * model_config , const char * fm if (run_mode == ENKF_ASSIMILATION) model_config->enkf_sched = enkf_sched_fscanf_alloc(model_config->enkf_sched_file , - history_get_last_restart(model_config->history) , + model_config_get_last_history_restart(model_config) , run_mode); } @@ -335,10 +353,12 @@ model_config_type * model_config_alloc() { model_config->history = NULL; model_config->jobname_fmt = NULL; model_config->forward_model = NULL; + model_config->external_time_map = NULL; model_config->internalize_state = bool_vector_alloc( 0 , false ); - model_config->__load_state = bool_vector_alloc( 0 , false ); + model_config->__load_eclipse_restart = bool_vector_alloc( 0 , false ); model_config->history_source = HISTORY_SOURCE_INVALID; model_config->runpath_map = hash_alloc(); + model_config->gen_kw_export_file_name = NULL; model_config_set_enspath( model_config , DEFAULT_ENSPATH ); model_config_set_rftpath( model_config , DEFAULT_RFTPATH ); @@ -346,6 +366,7 @@ model_config_type * model_config_alloc() { model_config_set_max_internal_submit( model_config , DEFAULT_MAX_INTERNAL_SUBMIT); model_config_add_runpath( model_config , DEFAULT_RUNPATH_KEY , DEFAULT_RUNPATH); model_config_select_runpath( model_config , DEFAULT_RUNPATH_KEY ); + model_config_set_gen_kw_export_file(model_config, DEFAULT_GEN_KW_EXPORT_FILE); return model_config; } @@ -413,14 +434,7 @@ void model_config_init(model_config_type * model_config , model_config_add_runpath( model_config , DEFAULT_RUNPATH_KEY , config_get_value(config , RUNPATH_KEY) ); model_config_select_runpath( model_config , DEFAULT_RUNPATH_KEY ); } - - if (config_item_set( config, RERUN_PATH_KEY)) - model_config_add_runpath( model_config , RERUN_PATH_KEY , config_get_value(config , RERUN_PATH_KEY) ); - - if (sched_file != NULL) { - } - { history_source_type source_type = DEFAULT_HISTORY_SOURCE; @@ -436,14 +450,25 @@ void model_config_init(model_config_type * model_config , } - - if (model_config->history != NULL) { - int num_restart = history_get_last_restart( model_config->history ); + int num_restart = model_config_get_last_history_restart(model_config); bool_vector_iset( model_config->internalize_state , num_restart - 1 , false ); - bool_vector_iset( model_config->__load_state , num_restart - 1 , false ); + bool_vector_iset( model_config->__load_eclipse_restart , num_restart - 1 , false ); } + if (config_item_set( config , TIME_MAP_KEY)) { + const char * filename = config_get_value_as_path( config , TIME_MAP_KEY); + time_map_type * time_map = time_map_alloc(); + if (time_map_fscanf( time_map , filename)) + model_config->external_time_map = time_map; + else { + time_map_free( time_map ); + fprintf(stderr,"** ERROR: Loading external time map from:%s failed \n", filename); + } + } + + + /* The full treatment of the SCHEDULE_PREDICTION_FILE keyword is in the ensemble_config file, because the functionality is implemented @@ -474,6 +499,17 @@ void model_config_init(model_config_type * model_config , if (config_item_set( config , MAX_RESAMPLE_KEY)) model_config_set_max_internal_submit( model_config , config_get_value_as_int( config , MAX_RESAMPLE_KEY )); + + + { + const char * export_file_name; + if (config_item_set( config , GEN_KW_EXPORT_FILE_KEY)) + export_file_name = config_get_value(config, GEN_KW_EXPORT_FILE_KEY); + else + export_file_name = DEFAULT_GEN_KW_EXPORT_FILE; + + model_config_set_gen_kw_export_file(model_config, export_file_name); + } } @@ -488,7 +524,6 @@ const char * model_config_iget_casename( const model_config_type * model_config void model_config_free(model_config_type * model_config) { - path_fmt_free( model_config->current_runpath ); if (model_config->enkf_sched != NULL) enkf_sched_free( model_config->enkf_sched ); free( model_config->enspath ); @@ -499,15 +534,22 @@ void model_config_free(model_config_type * model_config) { util_safe_free( model_config->case_table_file ); util_safe_free( model_config->current_path_key); - if (model_config->history != NULL) + if (model_config->history) history_free(model_config->history); - - if (model_config->forward_model != NULL) + + if (model_config->forward_model) forward_model_free(model_config->forward_model); + + if (model_config->external_time_map) + time_map_free( model_config->external_time_map ); + bool_vector_free(model_config->internalize_state); - bool_vector_free(model_config->__load_state); - if (model_config->case_names != NULL) stringlist_free( model_config->case_names ); + bool_vector_free(model_config->__load_eclipse_restart); + hash_free(model_config->runpath_map); + + if (model_config->case_names) + stringlist_free( model_config->case_names ); free(model_config); } @@ -533,12 +575,25 @@ history_type * model_config_get_history(const model_config_type * config) { return config->history; } +/** + Will be NULL unless the user has explicitly loaded an external time + map with the TIME_MAP config option. +*/ + +time_map_type * model_config_get_external_time_map( const model_config_type * config) { + return config->external_time_map; +} + int model_config_get_last_history_restart(const model_config_type * config) { if (config->history) return history_get_last_restart( config->history ); else { - fprintf(stderr,"** Warning: Trying to get the last restart number - no history object has been registered.\n"); - return 0; + if (config->external_time_map) + return time_map_get_last_step( config->external_time_map); + else { + fprintf(stderr,"** Warning: Trying to get the last restart number - no history/time_map object has been registered.\n"); + return 0; + } } } @@ -558,24 +613,24 @@ forward_model_type * model_config_get_forward_model( const model_config_type * c /* Setting everything back to the default value: false. */ void model_config_init_internalization( model_config_type * config ) { bool_vector_reset(config->internalize_state); - bool_vector_reset(config->__load_state); + bool_vector_reset(config->__load_eclipse_restart); } /** This function sets the internalize_state flag to true for - report_step. Because of the coupling to the __load_state variable + report_step. Because of the coupling to the __load_eclipse_restart variable this function can __ONLY__ be used to set internalize to true. */ void model_config_set_internalize_state( model_config_type * config , int report_step) { bool_vector_iset(config->internalize_state , report_step , true); - bool_vector_iset(config->__load_state , report_step , true); + bool_vector_iset(config->__load_eclipse_restart , report_step , true); } void model_config_set_load_state( model_config_type * config , int report_step) { - bool_vector_iset(config->__load_state , report_step , true); + bool_vector_iset(config->__load_eclipse_restart , report_step , true); } @@ -589,7 +644,7 @@ bool model_config_internalize_state( const model_config_type * config , int repo /*****************************************************************/ bool model_config_load_state( const model_config_type * config , int report_step) { - return bool_vector_iget(config->__load_state , report_step); + return bool_vector_iget(config->__load_eclipse_restart , report_step); } diff --git a/ThirdParty/Ert/devel/libenkf/src/obs_data.c b/ThirdParty/Ert/devel/libenkf/src/obs_data.c index ade0bf71ac..38de798359 100644 --- a/ThirdParty/Ert/devel/libenkf/src/obs_data.c +++ b/ThirdParty/Ert/devel/libenkf/src/obs_data.c @@ -94,8 +94,7 @@ struct obs_block_struct { struct obs_data_struct { vector_type * data; /* vector with obs_block instances. */ - int __active_size; -}; +}; @@ -142,6 +141,7 @@ void obs_block_deactivate( obs_block_type * obs_block , int iobs , const char * printf("Deactivating: %s(%d) : %s \n",obs_block->obs_key , iobs , msg); obs_block->active_mode[ iobs ] = DEACTIVATED; obs_block->active_size--; + } } @@ -333,7 +333,6 @@ obs_data_type * obs_data_alloc() { void obs_data_reset(obs_data_type * obs_data) { vector_clear( obs_data->data ); - obs_data->__active_size = -1; } @@ -639,17 +638,13 @@ void obs_data_scale_kernel(const obs_data_type * obs_data , matrix_type *S , mat int obs_data_get_active_size( obs_data_type * obs_data ) { - - if (obs_data->__active_size < 0) { int active_size = 0; for (int block_nr = 0; block_nr < vector_get_size( obs_data->data ); block_nr++) { const obs_block_type * obs_block = vector_iget_const( obs_data->data , block_nr ); - active_size += obs_block->active_size; + active_size += obs_block->active_size; } - obs_data->__active_size = active_size; - } - - return obs_data->__active_size; + + return active_size; } diff --git a/ThirdParty/Ert/devel/libenkf/src/obs_vector.c b/ThirdParty/Ert/devel/libenkf/src/obs_vector.c index dcf610d846..b144a5f6bb 100644 --- a/ThirdParty/Ert/devel/libenkf/src/obs_vector.c +++ b/ThirdParty/Ert/devel/libenkf/src/obs_vector.c @@ -74,22 +74,44 @@ UTIL_SAFE_CAST_FUNCTION(obs_vector , OBS_VECTOR_TYPE_ID) /*****************************************************************/ -static int __conf_instance_get_restart_nr(const conf_instance_type * conf_instance, const char * obs_key , const history_type * history , int size) { +static void obs_vector_prefer_RESTART_warning() { + fprintf(stderr," -------------------------------------------------------------------------------\n"); + fprintf(stderr," Warning: For GEN_OBS observations it is highly recommended to use the RESTART \n"); + fprintf(stderr," keyword to denote the time of the observation. The RESTART value \n"); + fprintf(stderr," should be matched with the report step embedded as part of the \n"); + fprintf(stderr," GEN_DATA result file created by the forward model. \n"); + fprintf(stderr,"\n"); + fprintf(stderr," In the future use OF DATE and DAYS will not be possible for GEN_OBS \n"); + fprintf(stderr," -------------------------------------------------------------------------------\n"); + fprintf(stderr,"\n"); + fprintf(stderr,"\n"); +} + + + +static int __conf_instance_get_restart_nr(const conf_instance_type * conf_instance, const char * obs_key , time_map_type * obs_time , bool prefer_restart) { int obs_restart_nr = -1; /* To shut up compiler warning. */ if(conf_instance_has_item(conf_instance, "RESTART")) { obs_restart_nr = conf_instance_get_item_value_int(conf_instance, "RESTART"); - if(obs_restart_nr > size) - util_abort("%s: Observation %s occurs at restart %i, but history file has only %i restarts.\n", __func__, obs_key, obs_restart_nr, size); + if (obs_restart_nr > time_map_get_last_step( obs_time)) + util_abort("%s: Observation %s occurs at restart %i, but history file has only %i restarts.\n", __func__, obs_key, obs_restart_nr, time_map_get_last_step( obs_time)); } else if(conf_instance_has_item(conf_instance, "DATE")) { time_t obs_date = conf_instance_get_item_value_time_t(conf_instance, "DATE" ); - obs_restart_nr = history_get_restart_nr_from_time_t( history , obs_date ); + obs_restart_nr = time_map_lookup_time( obs_time , obs_date ); + if (prefer_restart) + obs_vector_prefer_RESTART_warning(); } else if (conf_instance_has_item(conf_instance, "DAYS")) { double days = conf_instance_get_item_value_double(conf_instance, "DAYS"); - obs_restart_nr = history_get_restart_nr_from_days( history , days ); + obs_restart_nr = time_map_lookup_days( obs_time , days ); + if (prefer_restart) + obs_vector_prefer_RESTART_warning(); } else util_abort("%s: Internal error. Invalid conf_instance?\n", __func__); + if (obs_restart_nr < 0) + util_abort("%s: Failed to look up restart nr correctly \n",__func__); + return obs_restart_nr; } @@ -174,7 +196,12 @@ const char * obs_vector_get_state_kw(const obs_vector_type * obs_vector) { } -enkf_config_node_type * obs_vector_get_config_node(obs_vector_type * obs_vector) { +const char * obs_vector_get_key(const obs_vector_type * obs_vector) { + return obs_vector->obs_key; +} + + +enkf_config_node_type * obs_vector_get_config_node(const obs_vector_type * obs_vector) { return obs_vector->config_node; } @@ -313,6 +340,8 @@ void * obs_vector_iget_node(const obs_vector_type * vector, int index) { } + + void obs_vector_user_get(const obs_vector_type * obs_vector , const char * index_key , int report_step , double * value , double * std , bool * valid) { void * obs_node = obs_vector_iget_node( obs_vector , report_step ); obs_vector->user_get(obs_node , index_key , value , std , valid); @@ -341,6 +370,22 @@ int obs_vector_get_next_active_step(const obs_vector_type * obs_vector , int pre } +int obs_vector_get_last_active_step(const obs_vector_type * obs_vector) { + int step = vector_get_size( obs_vector->nodes ) - 1; + while (true) { + const void * obs_node = vector_iget_const( obs_vector->nodes , step ); + if (obs_node) + break; + + step--; + if (step < 0) + break; + } + return step; +} + + + /*****************************************************************/ /** All the obs_vector_load_from_XXXX() functions can safely return @@ -349,7 +394,7 @@ int obs_vector_get_next_active_step(const obs_vector_type * obs_vector , int pre */ -void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * conf_instance , const history_type * history, ensemble_config_type * ensemble_config) { +void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * conf_instance , time_map_type * obs_time , ensemble_config_type * ensemble_config) { if(!conf_instance_is_of_class(conf_instance, "SUMMARY_OBSERVATION")) util_abort("%s: internal error. expected \"SUMMARY_OBSERVATION\" instance, got \"%s\".\n", __func__, conf_instance_get_class_name_ref(conf_instance) ); @@ -361,12 +406,11 @@ void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , con const char * error_mode = conf_instance_get_item_value_ref( conf_instance, "ERROR_MODE"); const char * sum_key = conf_instance_get_item_value_ref( conf_instance, "KEY" ); const char * obs_key = conf_instance_get_name_ref(conf_instance); - int size = history_get_last_restart( history ); - int obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_key , history , size); + int obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_key , obs_time , false); if (obs_restart_nr == 0) { int day,month,year; - time_t start_time = history_get_time_t_from_restart_nr( history , 0 ); + time_t start_time = time_map_iget( obs_time , 0 ); util_set_date_values( start_time , &day , &month , &year); fprintf(stderr,"** ERROR: It is unfortunately not possible to use summary observations from the\n"); @@ -387,7 +431,7 @@ void obs_vector_load_from_SUMMARY_OBSERVATION(obs_vector_type * obs_vector , con -obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_type * conf_instance , const history_type * history, const ensemble_config_type * ensemble_config) { +obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_type * conf_instance , time_map_type * obs_time , const ensemble_config_type * ensemble_config) { if(!conf_instance_is_of_class(conf_instance, "GENERAL_OBSERVATION")) util_abort("%s: internal error. expected \"GENERAL_OBSERVATION\" instance, got \"%s\".\n", __func__, conf_instance_get_class_name_ref(conf_instance) ); @@ -395,9 +439,7 @@ obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_ const char * state_kw = conf_instance_get_item_value_ref( conf_instance, "DATA" ); if (ensemble_config_has_key( ensemble_config , state_kw )) { const char * obs_key = conf_instance_get_name_ref(conf_instance); - int size = history_get_last_restart( history ); - obs_vector_type * obs_vector = obs_vector_alloc( GEN_OBS , obs_key , ensemble_config_get_node(ensemble_config , state_kw ), size); - int obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_key , history , size); + int obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_key , obs_time , true); const char * index_file = NULL; const char * index_list = NULL; const char * obs_file = NULL; @@ -416,26 +458,35 @@ obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_ error_covar_file = conf_instance_get_item_value_ref( conf_instance, "ERROR_COVAR" ); { + obs_vector_type * obs_vector = NULL; const enkf_config_node_type * config_node = ensemble_config_get_node( ensemble_config , state_kw); + if (enkf_config_node_get_impl_type(config_node) == GEN_DATA) { double scalar_error = -1; double scalar_value = -1; gen_obs_type * gen_obs ; - - if (conf_instance_has_item(conf_instance , "VALUE")) { - scalar_value = conf_instance_get_item_value_double(conf_instance , "VALUE"); - scalar_error = conf_instance_get_item_value_double(conf_instance , "ERROR"); - } - - /** The config system has ensured that we have either OBS_FILE or (VALUE and ERROR). */ - gen_obs = gen_obs_alloc( enkf_config_node_get_ref( config_node ) , obs_key , obs_file , scalar_value , scalar_error , index_file , index_list , error_covar_file); - obs_vector_install_node( obs_vector , obs_restart_nr , gen_obs ); + const gen_data_config_type * config = enkf_config_node_get_ref( config_node ); + + if (gen_data_config_has_report_step( config , obs_restart_nr)) { + obs_vector = obs_vector_alloc( GEN_OBS , obs_key , ensemble_config_get_node(ensemble_config , state_kw ), time_map_get_last_step( obs_time )); + if (conf_instance_has_item(conf_instance , "VALUE")) { + scalar_value = conf_instance_get_item_value_double(conf_instance , "VALUE"); + scalar_error = conf_instance_get_item_value_double(conf_instance , "ERROR"); + } + + /** The config system has ensured that we have either OBS_FILE or (VALUE and ERROR). */ + gen_obs = gen_obs_alloc( enkf_config_node_get_ref( config_node ) , obs_key , obs_file , scalar_value , scalar_error , index_file , index_list , error_covar_file); + obs_vector_install_node( obs_vector , obs_restart_nr , gen_obs ); + } else + fprintf(stderr,"** ERROR: The GEN_DATA node:%s is not configured to load from report step:%d - the observation:%s will be ignored\n", state_kw , obs_restart_nr , obs_key); } else { ert_impl_type impl_type = enkf_config_node_get_impl_type(config_node); - util_abort("%s: %s has implementation type:\'%s\' - expected:\'%s\'.\n",__func__ , state_kw , enkf_types_get_impl_name(impl_type) , enkf_types_get_impl_name(GEN_DATA)); + fprintf(stderr,"** ERROR: %s: %s has implementation type:\'%s\' - expected:\'%s\' - observation:%s ignored.\n", + __func__ , state_kw , enkf_types_get_impl_name(impl_type) , enkf_types_get_impl_name(GEN_DATA) , obs_key); } + return obs_vector; + } - return obs_vector; } else { fprintf(stderr,"** Warning the ensemble key:%s does not exist - observation:%s not added \n", state_kw , obs_key); return NULL; @@ -448,6 +499,7 @@ obs_vector_type * obs_vector_alloc_from_GENERAL_OBSERVATION(const conf_instance_ bool obs_vector_load_from_HISTORY_OBSERVATION(obs_vector_type * obs_vector , const conf_instance_type * conf_instance , + time_map_type * obs_time , const history_type * history , ensemble_config_type * ensemble_config, double std_cutoff ) { @@ -483,7 +535,7 @@ bool obs_vector_load_from_HISTORY_OBSERVATION(obs_vector_type * obs_vector , // Get time series data from history object and allocate - size = history_get_last_restart(history); + size = time_map_get_last_step( obs_time ); if (history_init_ts( history , sum_key , value , valid )) { // Create the standard deviation vector @@ -608,8 +660,8 @@ static const char * __summary_kw( const char * field_name ) { obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_type * conf_instance , const ecl_grid_type * grid , + time_map_type * obs_time , const ecl_sum_type * refcase , - const history_type * history, ensemble_config_type * ensemble_config) { if(!conf_instance_is_of_class(conf_instance, "BLOCK_OBSERVATION")) @@ -637,7 +689,7 @@ obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_ty if (OK) { obs_vector_type * obs_vector = NULL; - int size = history_get_last_restart( history ); + int size = time_map_get_last_step( obs_time ); int obs_restart_nr ; stringlist_type * summary_keys = stringlist_alloc_new(); @@ -650,7 +702,7 @@ obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_ty int * obs_j = util_calloc(num_obs_pts , sizeof * obs_j ); int * obs_k = util_calloc(num_obs_pts , sizeof * obs_k ); - obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_label , history , size); + obs_restart_nr = __conf_instance_get_restart_nr(conf_instance , obs_label , obs_time , false); /** Build the observation. */ for(int obs_pt_nr = 0; obs_pt_nr < num_obs_pts; obs_pt_nr++) { @@ -691,7 +743,7 @@ obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_ty if (source_type == SOURCE_FIELD) { const enkf_config_node_type * config_node = ensemble_config_get_node( ensemble_config , field_name); const field_config_type * field_config = enkf_config_node_get_ref( config_node ); - block_obs_type * block_obs = block_obs_alloc(obs_label, source_type , NULL , field_config , grid , num_obs_pts, obs_i, obs_j, obs_k, obs_value, obs_std); + block_obs_type * block_obs = block_obs_alloc_complete(obs_label, source_type , NULL , field_config , grid , num_obs_pts, obs_i, obs_j, obs_k, obs_value, obs_std); if (block_obs != NULL) { obs_vector = obs_vector_alloc( BLOCK_OBS , obs_label , ensemble_config_get_node(ensemble_config , field_name), size ); @@ -723,7 +775,8 @@ obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_ty } { - block_obs_type * block_obs = block_obs_alloc(obs_label, source_type , summary_keys , container_config , grid , num_obs_pts, obs_i, obs_j, obs_k, obs_value, obs_std); + block_obs_type * block_obs = block_obs_alloc_complete(obs_label, source_type , summary_keys , enkf_config_node_get_ref(container_config) , + grid , num_obs_pts, obs_i, obs_j, obs_k, obs_value, obs_std); if (block_obs != NULL) { obs_vector = obs_vector_alloc( BLOCK_OBS , obs_label , container_config, size ); obs_vector_install_node( obs_vector , obs_restart_nr , block_obs); @@ -749,10 +802,10 @@ obs_vector_type * obs_vector_alloc_from_BLOCK_OBSERVATION(const conf_instance_ty } /*****************************************************************/ -void obs_vector_iget_observations(const obs_vector_type * obs_vector , int report_step , obs_data_type * obs_data, const active_list_type * active_list) { +void obs_vector_iget_observations(const obs_vector_type * obs_vector, int report_step , obs_data_type * obs_data, const active_list_type * active_list, enkf_fs_type * fs) { void * obs_node = vector_iget( obs_vector->nodes , report_step ); if ( obs_node != NULL) - obs_vector->get_obs(obs_node , obs_data , report_step , active_list); + obs_vector->get_obs(obs_node , obs_data , fs, report_step , active_list); } @@ -760,21 +813,95 @@ void obs_vector_measure(const obs_vector_type * obs_vector , enkf_fs_type * fs , state_enum state , int report_step , - int active_iens_index , - const enkf_state_type * enkf_state , + const int_vector_type * ens_active_list , meas_data_type * meas_data , const active_list_type * active_list) { void * obs_node = vector_iget( obs_vector->nodes , report_step ); if ( obs_node != NULL ) { - enkf_node_type * enkf_node = enkf_state_get_node( enkf_state , obs_vector_get_state_kw( obs_vector )); + enkf_node_type * enkf_node = enkf_node_deep_alloc( obs_vector->config_node ); + node_id_type node_id = { .report_step = report_step , .state = state , - .iens = enkf_state_get_iens( enkf_state ) }; - - enkf_node_load(enkf_node , fs , node_id); - node_id.iens = active_iens_index; - obs_vector->measure(obs_node , enkf_node_value_ptr(enkf_node) , node_id , meas_data , active_list); + .iens = 0 }; + + for (int active_iens_index =0; active_iens_index < int_vector_size( ens_active_list ); active_iens_index++) { + node_id.iens = int_vector_iget( ens_active_list , active_iens_index ); + + enkf_node_load(enkf_node , fs , node_id); + node_id.iens = active_iens_index; + obs_vector->measure(obs_node , enkf_node_value_ptr(enkf_node) , node_id , meas_data , active_list); + } + + enkf_node_free( enkf_node ); + } +} + + +static bool obs_vector_has_data_at_report_step( const obs_vector_type * obs_vector , const bool_vector_type * active_mask , enkf_fs_type * fs, int report_step) { + void * obs_node = vector_iget( obs_vector->nodes , report_step ); + if ( obs_node ) { + node_id_type node_id = {.state = FORECAST , + .report_step = report_step }; + for (int iens = 0; iens < bool_vector_size( active_mask ); iens++) { + if (bool_vector_iget( active_mask , iens)) { + node_id.iens = iens; + if (! enkf_config_node_has_node(obs_vector->config_node , fs , node_id )) + return false; + } + } + } + + /* + Will return true unconditionally if we do not have observation data at this report step; + or alternatively if the active_mask is all false. + */ + return true; +} + + +/* + The has_vector_data() function will only check that we have a vector + stored, and not the actual length of the vector. This means we can + be fooled if the stored vector is shorter than what the observation + requires. + + Should ideally check that the vector is long enough, but that + requires changes in the enkf_node api for vector storage. +*/ + +static bool obs_vector_has_vector_data( const obs_vector_type * obs_vector , const bool_vector_type * active_mask , enkf_fs_type * fs) { + bool has_data = true; + int iens = 0; + + while (true) { + const enkf_config_node_type * data_config = obs_vector->config_node; + if (bool_vector_iget( active_mask , iens )) { + if (!enkf_config_node_has_vector(data_config , fs , iens , FORECAST)) { + has_data = false; + break; + } + } + iens++; + if (iens >= bool_vector_size( active_mask )) + break; + } + + return has_data; +} + + + +bool obs_vector_has_data( const obs_vector_type * obs_vector , const bool_vector_type * active_mask , enkf_fs_type * fs) { + const enkf_config_node_type * data_config = obs_vector->config_node; + if (enkf_config_node_vector_storage( data_config )) + return obs_vector_has_vector_data( obs_vector , active_mask , fs ); + else { + for (int report_step = 0; report_step < vector_get_size( obs_vector->nodes ); report_step++) { + if (!obs_vector_has_data_at_report_step( obs_vector , active_mask , fs, report_step)) + return false; + } + return true; } } diff --git a/ThirdParty/Ert/devel/libenkf/src/pca_plot_data.c b/ThirdParty/Ert/devel/libenkf/src/pca_plot_data.c index 25a98568f8..ef9b33df20 100644 --- a/ThirdParty/Ert/devel/libenkf/src/pca_plot_data.c +++ b/ThirdParty/Ert/devel/libenkf/src/pca_plot_data.c @@ -32,6 +32,7 @@ struct pca_plot_data_struct { UTIL_TYPE_ID_DECLARATION; char * name; vector_type * pca_vectors; + double_vector_type * singular_values; int ens_size; }; @@ -39,10 +40,10 @@ struct pca_plot_data_struct { UTIL_IS_INSTANCE_FUNCTION( pca_plot_data , PCA_PLOT_DATA_TYPE_ID ) static UTIL_SAFE_CAST_FUNCTION( pca_plot_data , PCA_PLOT_DATA_TYPE_ID ) -static void pca_plot_data_add_vectors(pca_plot_data_type * plot_data , const matrix_type * PC , const matrix_type * PC_obs) { +static void pca_plot_data_add_vectors(pca_plot_data_type * plot_data , const matrix_type * PC , const matrix_type * PC_obs, const double_vector_type * singular_values) { int component; for (component = 0; component < matrix_get_rows( PC ); component++) { - pca_plot_vector_type * vector = pca_plot_vector_alloc( component , PC , PC_obs ); + pca_plot_vector_type * vector = pca_plot_vector_alloc( component , PC , PC_obs , singular_values); vector_append_owned_ref( plot_data->pca_vectors , vector , pca_plot_vector_free__); } } @@ -50,16 +51,18 @@ static void pca_plot_data_add_vectors(pca_plot_data_type * plot_data , const mat pca_plot_data_type * pca_plot_data_alloc( const char * name, const matrix_type * PC , - const matrix_type * PC_obs) { + const matrix_type * PC_obs, + const double_vector_type * singular_values) { pca_plot_data_type * plot_data = NULL; - if (pca_plot_assert_input( PC , PC_obs)) { + if (pca_plot_assert_input( PC , PC_obs , singular_values)) { plot_data = util_malloc( sizeof * plot_data ); UTIL_TYPE_ID_INIT( plot_data , PCA_PLOT_DATA_TYPE_ID ); plot_data->name = util_alloc_string_copy( name ); plot_data->pca_vectors = vector_alloc_new(); plot_data->ens_size = matrix_get_columns( PC ); - pca_plot_data_add_vectors( plot_data , PC , PC_obs ); + plot_data->singular_values = double_vector_alloc_copy( singular_values ); + pca_plot_data_add_vectors( plot_data , PC , PC_obs , singular_values); } return plot_data; } @@ -70,6 +73,7 @@ pca_plot_data_type * pca_plot_data_alloc( const char * name, void pca_plot_data_free( pca_plot_data_type * plot_data ) { vector_free( plot_data->pca_vectors ); + double_vector_free( plot_data->singular_values ); free( plot_data->name ); free( plot_data ); } @@ -96,3 +100,8 @@ const pca_plot_vector_type * pca_plot_data_iget_vector( const pca_plot_data_type const char * pca_plot_data_get_name( const pca_plot_data_type * plot_data ) { return plot_data->name; } + + +const double_vector_type * pca_plot_data_get_singular_values( const pca_plot_data_type * plot_data ) { + return plot_data->singular_values; +} diff --git a/ThirdParty/Ert/devel/libenkf/src/pca_plot_vector.c b/ThirdParty/Ert/devel/libenkf/src/pca_plot_vector.c index d26a34b1ac..b6f497d942 100644 --- a/ThirdParty/Ert/devel/libenkf/src/pca_plot_vector.c +++ b/ThirdParty/Ert/devel/libenkf/src/pca_plot_vector.c @@ -29,6 +29,7 @@ struct pca_plot_vector_struct { UTIL_TYPE_ID_DECLARATION; int size; + double singular_value; double obs_value; double * sim_data; }; @@ -37,36 +38,39 @@ struct pca_plot_vector_struct { UTIL_IS_INSTANCE_FUNCTION( pca_plot_vector , PCA_PLOT_VECTOR_TYPE_ID ) static UTIL_SAFE_CAST_FUNCTION( pca_plot_vector , PCA_PLOT_VECTOR_TYPE_ID ) -bool pca_plot_assert_input( const matrix_type * PC, const matrix_type * PC_obs) { +bool pca_plot_assert_input( const matrix_type * PC, const matrix_type * PC_obs, const double_vector_type * singular_values) { if ((matrix_get_rows(PC) == matrix_get_rows( PC_obs )) && - (matrix_get_columns(PC_obs) == 1)) + (matrix_get_columns(PC_obs) == 1) && + (double_vector_size( singular_values ) >= matrix_get_rows(PC))) return true; - else + else return false; } -static void pca_plot_vector_init_data( pca_plot_vector_type * plot_vector , int component, const matrix_type * PC , const matrix_type * PC_obs) { +static void pca_plot_vector_init_data( pca_plot_vector_type * plot_vector , int component, const matrix_type * PC , const matrix_type * PC_obs, const double_vector_type * singular_values) { int iens; for (iens = 0; iens < matrix_get_columns( PC ); iens++) plot_vector->sim_data[iens] = matrix_iget( PC, component , iens ); plot_vector->obs_value = matrix_iget( PC_obs , component , 0 ); + plot_vector->singular_value = double_vector_iget( singular_values , component ); } pca_plot_vector_type * pca_plot_vector_alloc( int component , const matrix_type * PC , - const matrix_type * PC_obs) { + const matrix_type * PC_obs, + const double_vector_type * singular_values) { pca_plot_vector_type * plot_vector = NULL; - if (pca_plot_assert_input( PC , PC_obs) && (component < matrix_get_rows( PC ))) { + if (pca_plot_assert_input( PC , PC_obs , singular_values ) && (component < matrix_get_rows( PC ))) { plot_vector = util_malloc( sizeof * plot_vector ); UTIL_TYPE_ID_INIT( plot_vector , PCA_PLOT_VECTOR_TYPE_ID ); plot_vector->obs_value = matrix_iget( PC_obs , component , 0 ); plot_vector->size = matrix_get_columns( PC ); plot_vector->sim_data = util_calloc( plot_vector->size , sizeof * plot_vector->sim_data ); - pca_plot_vector_init_data( plot_vector , component , PC , PC_obs ); + pca_plot_vector_init_data( plot_vector , component , PC , PC_obs , singular_values); } return plot_vector; @@ -94,6 +98,10 @@ double pca_plot_vector_get_obs_value( const pca_plot_vector_type * vector ) { return vector->obs_value; } +double pca_plot_vector_get_singular_value( const pca_plot_vector_type * vector ) { + return vector->singular_value; +} + double pca_plot_vector_iget_sim_value( const pca_plot_vector_type * vector , int sim_index) { return vector->sim_data[ sim_index ]; diff --git a/ThirdParty/Ert/devel/libenkf/src/qc_module.c b/ThirdParty/Ert/devel/libenkf/src/qc_module.c index 556d4b5871..3fc0730257 100644 --- a/ThirdParty/Ert/devel/libenkf/src/qc_module.c +++ b/ThirdParty/Ert/devel/libenkf/src/qc_module.c @@ -146,7 +146,8 @@ bool qc_module_run_workflow( const qc_module_type * qc_module , void * self) { if (!util_file_exists( qc_module->runpath_list_file )) fprintf(stderr,"** Warning: the file:%s with a list of runpath directories was not found - QC workflow wil probably fail.\n" , qc_module->runpath_list_file); - return ert_workflow_list_run_workflow__( qc_module->workflow_list , qc_module->qc_workflow , verbose , self); + bool result = ert_workflow_list_run_workflow__( qc_module->workflow_list, qc_module->qc_workflow , verbose , self); + return result; } else return false; } @@ -159,7 +160,9 @@ bool qc_module_has_workflow( const qc_module_type * qc_module ) { return true; } - +const workflow_type * qc_module_get_workflow( const qc_module_type * qc_module ) { + return qc_module->qc_workflow; +} /*****************************************************************/ diff --git a/ThirdParty/Ert/devel/libenkf/src/ranking_table.c b/ThirdParty/Ert/devel/libenkf/src/ranking_table.c index 55c895e65f..e3a85dbad1 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ranking_table.c +++ b/ThirdParty/Ert/devel/libenkf/src/ranking_table.c @@ -76,8 +76,8 @@ void ranking_table_add_data_ranking( ranking_table_type * ranking_table , bool s -void ranking_table_add_misfit_ranking( ranking_table_type * ranking_table , const misfit_ensemble_type * misfit_ensemble , const stringlist_type * obs_keys , int step1 , int step2 , const char * ranking_key) { - misfit_ranking_type * ranking = misfit_ranking_alloc( misfit_ensemble , obs_keys , step1 , step2 , ranking_key ); +void ranking_table_add_misfit_ranking( ranking_table_type * ranking_table , const misfit_ensemble_type * misfit_ensemble , const stringlist_type * obs_keys , const int_vector_type * steps , const char * ranking_key) { + misfit_ranking_type * ranking = misfit_ranking_alloc( misfit_ensemble , obs_keys , steps , ranking_key ); hash_insert_hash_owned_ref( ranking_table->ranking_table , ranking_key , ranking , misfit_ranking_free__ ); } @@ -113,6 +113,32 @@ bool ranking_table_display_ranking( const ranking_table_type * ranking_table , c return false; } + +bool ranking_table_fwrite_ranking( const ranking_table_type * ranking_table , const char * ranking_key, const char * filename ) { + if (hash_has_key( ranking_table->ranking_table , ranking_key)) { + void * ranking = hash_get( ranking_table->ranking_table , ranking_key ); + + FILE * file = util_mkdir_fopen(filename, "w"); + + if (data_ranking_is_instance( ranking )) { + data_ranking_type * data_ranking = data_ranking_safe_cast( ranking ); + data_ranking_display( data_ranking , file ); + } else if (misfit_ranking_is_instance( ranking )) { + misfit_ranking_type * misfit_ranking = misfit_ranking_safe_cast( ranking ); + misfit_ranking_display( misfit_ranking , file ); + } else + util_abort("%s: internal error \n",__func__); + + util_fclose(file); + + return true; + } else + return false; +} + + + + const int * ranking_table_get_permutation( const ranking_table_type * ranking_table , const char * ranking_key) { if (hash_has_key( ranking_table->ranking_table , ranking_key)) { void * ranking = hash_get( ranking_table->ranking_table , ranking_key ); diff --git a/ThirdParty/Ert/devel/libenkf/src/rng_config.c b/ThirdParty/Ert/devel/libenkf/src/rng_config.c index d4be6ed809..d7a0a8d66d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/rng_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/rng_config.c @@ -82,11 +82,9 @@ void rng_config_free( rng_config_type * rng) { free( rng ); } - -rng_type * rng_config_alloc_rng( rng_config_type * rng_config ) { +rng_type * rng_config_init_rng__(const rng_config_type * rng_config, rng_type * rng) { const char * seed_load = rng_config_get_seed_load_file( rng_config ); const char * seed_store = rng_config_get_seed_store_file( rng_config ); - rng_type * rng = rng_alloc( rng_config_get_type(rng_config) , INIT_DEFAULT); if (seed_load != NULL) { if (util_file_exists( seed_load)) { @@ -94,7 +92,7 @@ rng_type * rng_config_alloc_rng( rng_config_type * rng_config ) { rng_fscanf_state( rng , stream ); fclose( stream ); } else { - /* + /* In the special case that seed_load == seed_store; we accept a seed_load argument pointing to a non-existant file. */ @@ -107,8 +105,8 @@ rng_type * rng_config_alloc_rng( rng_config_type * rng_config ) { } } else rng_init( rng , INIT_DEV_URANDOM ); - - + + if (seed_store != NULL) { FILE * stream = util_mkdir_fopen( seed_store , "w"); rng_fprintf_state( rng , stream ); @@ -118,6 +116,18 @@ rng_type * rng_config_alloc_rng( rng_config_type * rng_config ) { return rng; } +rng_type * rng_config_alloc_init_rng( const rng_config_type * rng_config ) { + rng_type * rng = rng_alloc(rng_config_get_type(rng_config) , INIT_DEFAULT); + return rng_config_init_rng__(rng_config, rng); +} + + +void rng_config_init_rng( const rng_config_type * rng_config, rng_type * rng ) { + rng_config_init_rng__(rng_config, rng); +} + + + /*****************************************************************/ void rng_config_add_config_items( config_type * config ) { diff --git a/ThirdParty/Ert/devel/libenkf/src/runpath_list.c b/ThirdParty/Ert/devel/libenkf/src/runpath_list.c index a6d8e6556d..56420bb24d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/runpath_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/runpath_list.c @@ -41,6 +41,7 @@ struct runpath_list_struct { struct runpath_node_struct { UTIL_TYPE_ID_DECLARATION; int iens; + int iter; char * runpath; char * basename; }; @@ -51,11 +52,12 @@ struct runpath_node_struct { UTIL_SAFE_CAST_FUNCTION( runpath_node , RUNPATH_NODE_TYPE_ID ) UTIL_SAFE_CAST_FUNCTION_CONST( runpath_node , RUNPATH_NODE_TYPE_ID ) - static runpath_node_type * runpath_node_alloc( int iens, const char * runpath , const char * basename) { + static runpath_node_type * runpath_node_alloc( int iens, int iter, const char * runpath , const char * basename) { runpath_node_type * node = util_malloc( sizeof * node ); UTIL_TYPE_ID_INIT( node , RUNPATH_NODE_TYPE_ID ); node->iens = iens; + node->iter = iter; node->runpath = util_alloc_string_copy( runpath ); node->basename = util_alloc_string_copy( basename ); @@ -83,6 +85,10 @@ static int runpath_node_cmp( const void * arg1 , const void * arg2) { return 1; else if (node1->iens < node2->iens) return -1; + else if (node1->iter > node2->iter) + return 1; + else if (node1->iter < node2->iter) + return 1; else return 0; } @@ -90,7 +96,7 @@ static int runpath_node_cmp( const void * arg1 , const void * arg2) { static void runpath_node_fprintf( const runpath_node_type * node , const char * line_fmt , FILE * stream) { - fprintf(stream , line_fmt , node->iens, node->runpath , node->basename); + fprintf(stream , line_fmt , node->iens, node->runpath , node->basename, node->iter); } @@ -127,8 +133,9 @@ void runpath_list_sort( runpath_list_type * list ) { } -void runpath_list_add( runpath_list_type * list , int iens , const char * runpath , const char * basename) { - runpath_node_type * node = runpath_node_alloc( iens , runpath , basename ); +void runpath_list_add( runpath_list_type * list , int iens , int iter, const char * runpath , const char * basename) { + runpath_node_type * node = runpath_node_alloc( iens , iter, runpath , basename ); + pthread_rwlock_wrlock( &list->lock ); { vector_append_owned_ref( list->list , node , runpath_node_free__ ); @@ -184,6 +191,10 @@ int runpath_list_iget_iens( runpath_list_type * list , int index) { return node->iens; } +int runpath_list_iget_iter( runpath_list_type * list , int index) { + const runpath_node_type * node = runpath_list_iget_node( list , index ); + return node->iter; +} void runpath_list_fprintf(runpath_list_type * list , FILE * stream) { pthread_rwlock_rdlock( &list->lock ); diff --git a/ThirdParty/Ert/devel/libenkf/src/site_config.c b/ThirdParty/Ert/devel/libenkf/src/site_config.c index b112d6d87a..79e30253e8 100644 --- a/ThirdParty/Ert/devel/libenkf/src/site_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/site_config.c @@ -280,6 +280,16 @@ static void site_config_add_jobs(site_config_type * site_config, const config_ty site_config_install_job(site_config, job_key, description_file); } } + if (config_item_set(config, INSTALL_JOB_DIRECTORY_KEY)) { + const config_content_item_type * content_item = config_get_content_item(config, INSTALL_JOB_DIRECTORY_KEY); + int num_dirs = config_content_item_get_size(content_item); + for (int dir_nr = 0; dir_nr < num_dirs; dir_nr++) { + config_content_node_type * node = config_content_item_iget_node(content_item, dir_nr); + const char * directory = config_content_node_iget_as_abspath(node, 0); + ext_joblist_add_jobs_in_directory(site_config->joblist , directory, site_config->__license_root_path, site_config->user_mode ); + } + } + } hash_type * site_config_get_env_hash(const site_config_type * site_config) { @@ -579,18 +589,31 @@ bool site_config_queue_is_running(const site_config_type * site_config) { /** The job_script might be a relative path, and the cwd changes during execution, i.e. it is essential to get hold of the full path. - */ +*/ -void site_config_set_job_script(site_config_type * site_config, const char * job_script) { - char * job_script_full_path = util_alloc_realpath(job_script); - { - site_config->job_script = util_realloc_string_copy(site_config->job_script, job_script_full_path); - if (!site_config->user_mode) - site_config->job_script_site = util_realloc_string_copy(site_config->job_script_site, site_config->job_script); - } - free(job_script_full_path); +bool site_config_set_job_script(site_config_type * site_config, const char * job_script) { + if (util_is_executable(job_script)) { + char * job_script_full_path = util_alloc_realpath(job_script); + { + site_config->job_script = util_realloc_string_copy(site_config->job_script, job_script_full_path); + if (!site_config->user_mode) + site_config->job_script_site = util_realloc_string_copy(site_config->job_script_site, site_config->job_script); + } + free(job_script_full_path); + return true; + } else + return false; +} + + +bool site_config_has_job_script( const site_config_type * site_config ) { + if (site_config->job_script) + return true; + else + return false; } + const char * site_config_get_job_script(const site_config_type * site_config) { return site_config->job_script; } @@ -623,9 +646,6 @@ int site_config_get_max_submit(const site_config_type * site_config) { } static void site_config_install_job_queue(site_config_type * site_config) { - if (site_config->job_script == NULL) - util_exit("Must set the path to the job script with the %s key in the site_config / config file\n", JOB_SCRIPT_KEY); - /* All the various driver options are set, unconditionally of which driver is actually selected in the end. @@ -817,6 +837,7 @@ void site_config_free(site_config_type * site_config) { util_clear_directory(site_config->__license_root_path, true, true); util_safe_free(site_config->manual_url); + util_safe_free(site_config->default_browser); util_safe_free(site_config->license_root_path); util_safe_free(site_config->license_root_path_site); util_safe_free(site_config->__license_root_path); @@ -1034,9 +1055,11 @@ void site_config_add_config_items(config_type * config, bool site_mode) { config_schema_item_set_argc_minmax(item, 2, 2); config_schema_item_set_envvar_expansion(item, false); /* Do not expand $VAR expressions (that is done in util_interp_setenv()). */ - item = config_add_schema_item(config, LICENSE_PATH_KEY, site_mode); - config_schema_item_set_argc_minmax(item, 1, 1); - config_schema_item_iset_type(item, 0, CONFIG_PATH); + if (!site_mode) { + item = config_add_schema_item(config, LICENSE_PATH_KEY, false); + config_schema_item_set_argc_minmax(item, 1, 1); + config_schema_item_iset_type(item, 0, CONFIG_PATH); + } /*****************************************************************/ @@ -1077,7 +1100,7 @@ void site_config_add_config_items(config_type * config, bool site_mode) { item = config_add_schema_item(config, QUEUE_OPTION_KEY, false); config_schema_item_set_argc_minmax(item, 3, CONFIG_DEFAULT_ARG_MAX); - item = config_add_schema_item(config, JOB_SCRIPT_KEY, site_mode); + item = config_add_schema_item(config, JOB_SCRIPT_KEY, false); config_schema_item_set_argc_minmax(item, 1, 1); config_schema_item_iset_type(item, 0, CONFIG_EXISTING_PATH); @@ -1085,7 +1108,14 @@ void site_config_add_config_items(config_type * config, bool site_mode) { config_schema_item_set_argc_minmax(item, 2, 2); config_schema_item_iset_type(item, 1, CONFIG_EXISTING_PATH); + item = config_add_schema_item(config, INSTALL_JOB_DIRECTORY_KEY, false); + config_schema_item_set_argc_minmax(item, 1, 1); + config_schema_item_iset_type(item, 0, CONFIG_PATH); + /* Items related to the reports. */ item = config_add_schema_item(config, REPORT_SEARCH_PATH_KEY, false); config_schema_item_set_argc_minmax(item, 1, CONFIG_DEFAULT_ARG_MAX); + + item = config_add_schema_item( config , ANALYSIS_LOAD_KEY , false ); + config_schema_item_set_argc_minmax( item , 2 , 2); } diff --git a/ThirdParty/Ert/devel/libenkf/src/state_map.c b/ThirdParty/Ert/devel/libenkf/src/state_map.c index d30f32689e..dbe51e7b85 100644 --- a/ThirdParty/Ert/devel/libenkf/src/state_map.c +++ b/ThirdParty/Ert/devel/libenkf/src/state_map.c @@ -80,7 +80,9 @@ state_map_type * state_map_alloc_copy( state_map_type * map ) { return copy; } + void state_map_free( state_map_type * map ) { + int_vector_free( map->state ); free( map ); } @@ -133,7 +135,7 @@ bool state_map_legal_transition( realisation_state_enum state1 , realisation_sta else if (state1 == STATE_HAS_DATA) target_mask = STATE_INITIALIZED | STATE_LOAD_FAILURE | STATE_HAS_DATA | STATE_PARENT_FAILURE; else if (state1 == STATE_LOAD_FAILURE) - target_mask = STATE_HAS_DATA | STATE_INITIALIZED; + target_mask = STATE_HAS_DATA | STATE_INITIALIZED | STATE_LOAD_FAILURE; else if (state1 == STATE_PARENT_FAILURE) target_mask = STATE_INITIALIZED | STATE_PARENT_FAILURE; @@ -196,7 +198,8 @@ void state_map_fwrite( state_map_type * map , const char * filename) { -void state_map_fread( state_map_type * map , const char * filename) { +bool state_map_fread( state_map_type * map , const char * filename) { + bool file_exists = false; pthread_rwlock_wrlock( &map->rw_lock ); { if (util_file_exists( filename )) { @@ -206,10 +209,12 @@ void state_map_fread( state_map_type * map , const char * filename) { fclose( stream ); } else util_abort("%s: failed to open:%s for reading \n",__func__ , filename ); + file_exists = true; } else int_vector_reset( map->state ); } pthread_rwlock_unlock( &map->rw_lock ); + return file_exists; } diff --git a/ThirdParty/Ert/devel/libenkf/src/summary.c b/ThirdParty/Ert/devel/libenkf/src/summary.c index 01eb84470a..488289d18f 100644 --- a/ThirdParty/Ert/devel/libenkf/src/summary.c +++ b/ThirdParty/Ert/devel/libenkf/src/summary.c @@ -21,7 +21,6 @@ #include #include -#include #include #include @@ -35,6 +34,7 @@ #include #include #include +#include /*****************************************************************/ @@ -138,7 +138,7 @@ void summary_copy(const summary_type *src , summary_type * target) { -void summary_read_from_buffer(summary_type * summary , buffer_type * buffer, int report_step, state_enum state) { +void summary_read_from_buffer(summary_type * summary , buffer_type * buffer, enkf_fs_type * fs, int report_step, state_enum state) { enkf_util_assert_buffer_type( buffer , SUMMARY ); if (summary->vector_storage) { double_vector_type * storage_vector = SELECT_VECTOR( summary , state ); @@ -314,7 +314,7 @@ bool summary_forward_load(summary_type * summary , const char * ecl_file_name , -bool summary_forward_load_vector(summary_type * summary , const char * ecl_file_name , const ecl_sum_type * ecl_sum, const ecl_file_type * ecl_file , int report_step1, int report_step2) { +bool summary_forward_load_vector(summary_type * summary , const char * ecl_file_name , const ecl_sum_type * ecl_sum, const ecl_file_type * ecl_file , const int_vector_type * time_index) { bool loadOK = false; if (summary->vector_storage) { @@ -332,8 +332,11 @@ bool summary_forward_load_vector(summary_type * summary , const char * ecl_file_ */ if (!ecl_sum_has_general_var(ecl_sum , var_key)) { - for (int report_step = report_step1; report_step <= report_step2; report_step++) - double_vector_iset( storage_vector , report_step , 0); + for (int step = 0; step < int_vector_size( time_index ); step++) { + int summary_step = int_vector_iget( time_index , step ); + if (summary_step >= 0) + double_vector_iset( storage_vector , summary_step , 0); + } loadOK = true; if (load_fail_action == LOAD_FAIL_WARN) @@ -345,14 +348,18 @@ bool summary_forward_load_vector(summary_type * summary , const char * ecl_file_ if (normal_load) { - int sum_index = ecl_sum_get_general_var_params_index( ecl_sum , var_key ); - for (int report_step = report_step1; report_step <= report_step2; report_step++) { + int key_index = ecl_sum_get_general_var_params_index( ecl_sum , var_key ); + + for (int store_index = 0; store_index < int_vector_size( time_index ); store_index++) { + int summary_index = int_vector_iget( time_index , store_index ); - if (ecl_sum_has_report_step( ecl_sum , report_step )) { - int last_report_index = ecl_sum_iget_report_end( ecl_sum , report_step ); - - double_vector_iset( storage_vector , report_step , ecl_sum_iget(ecl_sum , last_report_index , sum_index )); + if (summary_index >= 0) { + if (ecl_sum_has_report_step( ecl_sum , summary_index )) { + int last_ministep_index = ecl_sum_iget_report_end( ecl_sum , summary_index ); + double_vector_iset( storage_vector , store_index , ecl_sum_iget(ecl_sum , last_ministep_index , key_index )); + } } + } loadOK = true; } diff --git a/ThirdParty/Ert/devel/libenkf/src/summary_config.c b/ThirdParty/Ert/devel/libenkf/src/summary_config.c index bd26fd39fb..061fcb5dfc 100644 --- a/ThirdParty/Ert/devel/libenkf/src/summary_config.c +++ b/ThirdParty/Ert/devel/libenkf/src/summary_config.c @@ -46,7 +46,7 @@ struct summary_config_struct { /*****************************************************************/ - +UTIL_IS_INSTANCE_FUNCTION(summary_config , SUMMARY_CONFIG_TYPE_ID) const char * summary_config_get_var(const summary_config_type * config) { return config->var; diff --git a/ThirdParty/Ert/devel/libenkf/src/summary_obs.c b/ThirdParty/Ert/devel/libenkf/src/summary_obs.c index 7a5f2ba57f..78cea13aba 100644 --- a/ThirdParty/Ert/devel/libenkf/src/summary_obs.c +++ b/ThirdParty/Ert/devel/libenkf/src/summary_obs.c @@ -152,6 +152,7 @@ const char * summary_obs_get_summary_key(const summary_obs_type * summary_obs) */ void summary_obs_get_observations(const summary_obs_type * summary_obs, obs_data_type * obs_data, + enkf_fs_type * fs, int report_step , const active_list_type * __active_list) { diff --git a/ThirdParty/Ert/devel/libenkf/src/surface.c b/ThirdParty/Ert/devel/libenkf/src/surface.c index 695b4708fb..5b6b9cac5a 100644 --- a/ThirdParty/Ert/devel/libenkf/src/surface.c +++ b/ThirdParty/Ert/devel/libenkf/src/surface.c @@ -21,7 +21,6 @@ #include #include -#include #include @@ -53,15 +52,18 @@ void surface_clear(surface_type * surface) { } bool surface_fload( surface_type * surface , const char * filename ) { - const geo_surface_type * base_surface = surface_config_get_base_surface( surface->config ); - return geo_surface_fload_irap_zcoord( base_surface , filename , surface->data ); + bool ret = false; + if (filename) { + const geo_surface_type * base_surface = surface_config_get_base_surface( surface->config ); + ret = geo_surface_fload_irap_zcoord( base_surface , filename , surface->data ); + } + return ret; } bool surface_initialize(surface_type *surface , int iens , const char * filename , rng_type * rng) { - surface_fload(surface , filename ); - return true; + return surface_fload(surface , filename ); } @@ -91,7 +93,7 @@ void surface_copy(const surface_type *src , surface_type * target) { -void surface_read_from_buffer(surface_type * surface , buffer_type * buffer, int report_step, state_enum state) { +void surface_read_from_buffer(surface_type * surface , buffer_type * buffer, enkf_fs_type * fs, int report_step, state_enum state) { int size = surface_config_get_data_size( surface->config ); enkf_util_assert_buffer_type( buffer , SURFACE ); buffer_fread( buffer , surface->data , sizeof * surface->data , size); @@ -135,7 +137,7 @@ void surface_deserialize(surface_type * surface , node_id_type node_id , const a } -void surface_ecl_write(const surface_type * surface , const char * run_path , const char * base_file , fortio_type * fortio) { +void surface_ecl_write(const surface_type * surface , const char * run_path , const char * base_file , void * filestream) { char * target_file = util_alloc_filename( run_path , base_file , NULL); surface_config_ecl_write( surface->config , target_file , surface->data ); free( target_file ); diff --git a/ThirdParty/Ert/devel/libenkf/src/time_map.c b/ThirdParty/Ert/devel/libenkf/src/time_map.c index 96f51ecb08..edc3615c33 100644 --- a/ThirdParty/Ert/devel/libenkf/src/time_map.c +++ b/ThirdParty/Ert/devel/libenkf/src/time_map.c @@ -27,10 +27,14 @@ #include +#include #include #define DEFAULT_TIME -1 +static time_t time_map_iget__( const time_map_type * map , int step ); +static void time_map_update_abort( time_map_type * map , int step , time_t time); +static void time_map_summary_update_abort( time_map_type * map , const ecl_sum_type * ecl_sum); #define TIME_MAP_TYPE_ID 7751432 struct time_map_struct { @@ -38,10 +42,15 @@ struct time_map_struct { time_t_vector_type * map; pthread_rwlock_t rw_lock; bool modified; + bool read_only; + bool strict; + const ecl_sum_type * refcase; }; UTIL_SAFE_CAST_FUNCTION( time_map , TIME_MAP_TYPE_ID ) +UTIL_IS_INSTANCE_FUNCTION( time_map , TIME_MAP_TYPE_ID ) + time_map_type * time_map_alloc( ) { time_map_type * map = util_malloc( sizeof * map ); @@ -49,10 +58,116 @@ time_map_type * time_map_alloc( ) { map->map = time_t_vector_alloc(0 , DEFAULT_TIME ); map->modified = false; + map->read_only = false; + map->strict = true; + map->refcase = NULL; pthread_rwlock_init( &map->rw_lock , NULL); return map; } +bool time_map_is_strict( const time_map_type * time_map ){ + return time_map->strict; +} + +/** + The refcase will only be attached if it is consistent with the + current time map. +*/ +bool time_map_attach_refcase( time_map_type * time_map , const ecl_sum_type * refcase) { + bool attach_ok = true; + pthread_rwlock_rdlock( &time_map->rw_lock ); + + { + int step; + for (step = 0; step < time_map_get_size(time_map); step++) { + time_t current_time = time_map_iget__( time_map , step ); + time_t sim_time = ecl_sum_get_report_time( refcase , step ); + + if (current_time != sim_time) { + attach_ok = false; + break; + } + } + + if (attach_ok) + time_map->refcase = refcase; + } + pthread_rwlock_unlock( &time_map->rw_lock ); + + return attach_ok; +} + +bool time_map_has_refcase( const time_map_type * time_map ) { + if (time_map->refcase) + return true; + else + return false; +} + + +void time_map_set_strict( time_map_type * time_map , bool strict) { + time_map->strict = strict; +} + + +time_map_type * time_map_fread_alloc_readonly( const char * filename) { + time_map_type * tm = time_map_alloc(); + + if (util_file_exists(filename)) + time_map_fread( tm , filename ); + tm->read_only = true; + + return tm; +} + + +bool time_map_fscanf(time_map_type * map , const char * filename) { + bool fscanf_ok = true; + if (util_is_file( filename )) { + time_t_vector_type * time_vector = time_t_vector_alloc(0,0); + + { + FILE * stream = util_fopen(filename , "r"); + time_t last_date = 0; + while (true) { + char date_string[128]; + if (fscanf(stream , "%s" , date_string) == 1) { + time_t date; + if (util_sscanf_date(date_string , &date)) { + if (date > last_date) + time_t_vector_append( time_vector , date ); + else { + fprintf(stderr,"** ERROR: The dates in %s must be in stricly increasing order\n",filename); + fscanf_ok = false; + break; + } + } else { + fprintf(stderr,"** ERROR: The string \'%s\' was not correctly parsed as a date (format: DD/MM/YYYY) ",date_string); + fscanf_ok = false; + break; + } + last_date = date; + } else + break; + } + fclose( stream ); + + if (fscanf_ok) { + int i; + time_map_clear( map ); + for (i=0; i < time_t_vector_size( time_vector ); i++) + time_map_update( map , i , time_t_vector_iget( time_vector , i )); + } + + } + time_t_vector_free( time_vector ); + } else + return fscanf_ok = false; + + return fscanf_ok; +} + + bool time_map_equal( const time_map_type * map1 , const time_map_type * map2) { return time_t_vector_equal( map1->map , map2->map ); } @@ -64,22 +179,42 @@ void time_map_free( time_map_type * map ) { } +bool time_map_is_readonly( const time_map_type * tm) { + return tm->read_only; +} + + + /** - Must hold the write lock. + Must hold the write lock. When a refcase is supplied we gurantee + that all values written into the map agree with the refcase + values. However the time map is not preinitialized with the refcase + values. */ - -static bool time_map_update__( time_map_type * map , int step , time_t time) { +static bool time_map_update__( time_map_type * map , int step , time_t update_time) { bool updateOK = true; time_t current_time = time_t_vector_safe_iget( map->map , step); - if (current_time == DEFAULT_TIME) - time_t_vector_iset( map->map , step , time ); - else if (current_time != time) + if (current_time == DEFAULT_TIME) { + if (map->refcase) { + if (step <= ecl_sum_get_last_report_step( map->refcase )) { + time_t ref_time = ecl_sum_get_report_time( map->refcase , step ); + + if (ref_time != update_time) { + updateOK = false; + ert_log_add_message( 1 , NULL , "Tried to load data where report step/data is incompatible with refcase - ignored" , false); + } + } + } + } else if (current_time != update_time) updateOK = false; - if (updateOK) + + if (updateOK) { map->modified = true; + time_t_vector_iset( map->map , step , update_time ); + } return updateOK; } @@ -93,10 +228,12 @@ static bool time_map_summary_update__( time_map_type * map , const ecl_sum_type for (step = first_step; step <= last_step; step++) { if (ecl_sum_has_report_step(ecl_sum , step)) { - time_t time = ecl_sum_get_report_time( ecl_sum , step ); - updateOK = (updateOK && time_map_update__( map , step , time )); + time_t sim_time = ecl_sum_get_report_time( ecl_sum , step ); + + updateOK = (updateOK && time_map_update__( map , step , sim_time )); } } + updateOK = (updateOK && time_map_update__(map , 0 , ecl_sum_get_start_time( ecl_sum ))); return updateOK; } @@ -138,7 +275,10 @@ time_t time_map_iget( time_map_type * map , int step ) { return t; } - +static void time_map_assert_writable( const time_map_type * map) { + if (map->read_only) + util_abort("%s: attempt to modify read-only time-map. \n",__func__); +} /** @@ -163,6 +303,7 @@ void time_map_fwrite( time_map_type * map , const char * filename ) { void time_map_fread( time_map_type * map , const char * filename) { + time_map_assert_writable( map ); pthread_rwlock_wrlock( &map->rw_lock ); { if (util_file_exists( filename )) { @@ -183,6 +324,8 @@ void time_map_fread( time_map_type * map , const char * filename) { + + /* Observe that the return value from this function is an inclusive value; i.e. it should be permissible to ask for results at this report @@ -220,8 +363,22 @@ double time_map_get_end_days( time_map_type * map) { /*****************************************************************/ + bool time_map_update( time_map_type * map , int step , time_t time) { + bool updateOK = time_map_try_update( map , step , time ); + if (!updateOK) { + if (map->strict) + time_map_update_abort(map , step , time); + else + ert_log_add_message(1 , NULL , "Report step/true time inconsistency - data will be ignored" , false); + } + return updateOK; +} + + +bool time_map_try_update( time_map_type * map , int step , time_t time) { bool updateOK; + time_map_assert_writable( map ); pthread_rwlock_wrlock( &map->rw_lock ); { updateOK = time_map_update__( map , step , time ); @@ -231,18 +388,74 @@ bool time_map_update( time_map_type * map , int step , time_t time) { } + bool time_map_summary_update( time_map_type * map , const ecl_sum_type * ecl_sum) { + bool updateOK = time_map_try_summary_update( map , ecl_sum ); + + if (!updateOK) { + if (map->strict) + time_map_summary_update_abort( map , ecl_sum ); + else + ert_log_add_message(1 , NULL , "Report step/true time inconsistency - data will be ignored" , false); + } + + return updateOK; +} + + +bool time_map_try_summary_update( time_map_type * map , const ecl_sum_type * ecl_sum) { bool updateOK; + + time_map_assert_writable( map ); pthread_rwlock_wrlock( &map->rw_lock ); { updateOK = time_map_summary_update__( map , ecl_sum ); } pthread_rwlock_unlock( &map->rw_lock ); + return updateOK; } +int time_map_lookup_time( time_map_type * map , time_t time) { + int index = -1; + pthread_rwlock_rdlock( &map->rw_lock ); + { + int current_index = 0; + while (true) { + if (current_index >= time_t_vector_size( map->map )) + break; + + if (time_map_iget__( map , current_index ) == time) { + index = current_index; + break; + } + + current_index++; + } + } + pthread_rwlock_unlock( &map->rw_lock ); + return index; +} + + +int time_map_lookup_days( time_map_type * map , double sim_days) { + int index = -1; + pthread_rwlock_rdlock( &map->rw_lock ); + { + if (time_t_vector_size( map->map ) > 0) { + time_t time = time_map_iget__(map , 0 ); + util_inplace_forward_days( &time , sim_days ); + index = time_map_lookup_time( map , time ); + } + } + pthread_rwlock_unlock( &map->rw_lock ); + return index; +} + + void time_map_clear( time_map_type * map ) { + time_map_assert_writable( map ); pthread_rwlock_wrlock( &map->rw_lock ); { time_t_vector_reset( map->map ); @@ -253,43 +466,166 @@ void time_map_clear( time_map_type * map ) { /*****************************************************************/ -void time_map_update_strict( time_map_type * map , int step , time_t time) { - if (!time_map_update( map , step , time )) { - time_t current_time = time_map_iget__( map , step ); - int current[3]; - int new[3]; +static void time_map_update_abort( time_map_type * map , int step , time_t time) { + time_t current_time = time_map_iget__( map , step ); + int current[3]; + int new[3]; - util_set_date_values( current_time , ¤t[0] , ¤t[1] , ¤t[2]); - util_set_date_values( time , &new[0] , &new[1] , &new[2]); + util_set_date_values( current_time , ¤t[0] , ¤t[1] , ¤t[2]); + util_set_date_values( time , &new[0] , &new[1] , &new[2]); - util_abort("%s: time mismatch for step:%d New: %02d/%02d/%04d existing: %02d/%02d/%04d \n",__func__ , step , - new[0] , new[1] , new[2] , - current[0] , current[1] , current[2]); - - } + util_abort("%s: time mismatch for step:%d New: %02d/%02d/%04d existing: %02d/%02d/%04d \n",__func__ , step , + new[0] , new[1] , new[2] , + current[0] , current[1] , current[2]); } -void time_map_summary_update_strict( time_map_type * map , const ecl_sum_type * ecl_sum) { - if (!time_map_summary_update( map , ecl_sum)) { - /* - If the normal summary update fails we just play through all - time steps to pinpoint exactly the step where the update fails. - */ - int first_step = ecl_sum_get_first_report_step( ecl_sum ); - int last_step = ecl_sum_get_last_report_step( ecl_sum ); - int step; + +static void time_map_summary_update_abort( time_map_type * map , const ecl_sum_type * ecl_sum) { + /* + If the normal summary update fails we just play through all + time steps to pinpoint exactly the step where the update fails. + */ + + int first_step = ecl_sum_get_first_report_step( ecl_sum ); + int last_step = ecl_sum_get_last_report_step( ecl_sum ); + int step; + + for (step = first_step; step <= last_step; step++) { + if (ecl_sum_has_report_step(ecl_sum , step)) { + time_t time = ecl_sum_get_report_time( ecl_sum , step ); + + if (map->refcase) { + if (ecl_sum_get_last_report_step( ecl_sum ) >= step) { + time_t ref_time = ecl_sum_get_report_time( map->refcase , step ); + if (ref_time != time) { + int ref[3]; + int new[3]; - for (step = first_step; step <= last_step; step++) { - if (ecl_sum_has_report_step(ecl_sum , step)) { - time_t time = ecl_sum_get_report_time( ecl_sum , step ); - time_map_update_strict( map , step , time ); + util_set_date_values( time , &new[0] , &new[1] , &new[2]); + util_set_date_values( ref_time , &ref[0] , &ref[1] , &ref[2]); + + fprintf(stderr," Time mismatch for step:%d New: %02d/%02d/%04d refcase: %02d/%02d/%04d \n", step , + new[0] , new[1] , new[2] , + ref[0] , ref[1] , ref[2]); + } + } + } + + { + time_t current_time = time_map_iget__( map , step ); + int current[3]; + int new[3]; + + util_set_date_values( current_time , ¤t[0] , ¤t[1] , ¤t[2]); + util_set_date_values( time , &new[0] , &new[1] , &new[2]); + + fprintf(stderr,"Time mismatch for step:%d New: %02d/%02d/%04d existing: %02d/%02d/%04d \n",step , + new[0] , new[1] , new[2] , + current[0] , current[1] , current[2]); } } } + + util_abort("%s: inconsistency when updating time map \n",__func__); } +/*****************************************************************/ + + +/* + This function creates an integer index mapping from the time map + into the summary case. In general the time <-> report step mapping + of the summary data should coincide exactly with the one maintained + in the time_map, however we allow extra timesteps in the summary + instance. The extra timesteps will be ignored, holes in the summary + timestep is not allowed - that will lead to a hard crash. + + time map Summary + ------------------------------------------------- + 0: 01/01/2000 <------- 0: 01/01/2000 + + 1: 01/02/2000 <------- 1: 01/02/2000 + + 2: 01/03/2000 <-\ 2: 02/02/2000 (Ignored) + \ + \-- 3: 01/03/2000 + + 3: 01/04/2000 <------- 4: 01/04/2000 + + + index_map = { 0 , 1 , 3 , 4 } + + Observe that the time_map_update_summary() must be called prior to + calling this function, to ensure that the time_map is sufficiently + long. If timesteps are missing from the summary case we crash hard: + + + time map Summary + ------------------------------------------------- + 0: 01/01/2000 <------- 0: 01/01/2000 + + 1: 01/02/2000 <------- 1: 01/02/2000 + + 2: 01/03/2000 ## ERROR -> util_abort() + + 3: 01/04/2000 <------- 2: 01/04/2000 + +*/ + + + +int_vector_type * time_map_alloc_index_map( time_map_type * map , const ecl_sum_type * ecl_sum ) { + int_vector_type * index_map = int_vector_alloc(0 , -1 ); + pthread_rwlock_rdlock( &map->rw_lock ); + { + int time_map_index = 0; + int sum_index = 0; + + while (true) { + time_t map_time = time_map_iget__( map , time_map_index); + if (map_time == DEFAULT_TIME) + break; + + { + time_t sum_time; + + while (true) { + sum_time = ecl_sum_iget_sim_time( ecl_sum , sum_index ); + + if (sum_time > map_time) { + int day,month,year; + util_set_date_values( map_time , &day , &month , &year); + util_abort("%s: The eclipse summary cases is missing data for date:%02d/%02d/%4d - aborting\n", __func__ , day , month , year); + } else if (sum_time < map_time) { + sum_index++; + if (sum_index > ecl_sum_get_last_report_step( ecl_sum )) + break; + } else + break; + + } + + if (sum_time == map_time) + int_vector_iset( index_map , time_map_index , sum_index); + else { + ert_log_add_message(1 , NULL , "Inconsistency in time_map - data will be ignored" , false); + break; + } + + + time_map_index++; + if (time_map_index == time_map_get_size( map )) + break; + + } + } + } + pthread_rwlock_unlock( &map->rw_lock ); + + return index_map; +} + -/*****************************************************************/ diff --git a/ThirdParty/Ert/devel/libenkf/src/trans_func.c b/ThirdParty/Ert/devel/libenkf/src/trans_func.c index ac306a2b04..2eafd80b2d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/trans_func.c +++ b/ThirdParty/Ert/devel/libenkf/src/trans_func.c @@ -33,11 +33,12 @@ struct trans_func_struct { - char * name; /* The name this function is registered as. */ - arg_pack_type * params; /* The parameter values registered for this function. */ - transform_ftype * func; /* A pointer to the actual transformation function. */ - validate_ftype * validate; /* A pointer to a a function which can be used to validate the parameters - can be NULL. */ - stringlist_type * param_names; /* A list of the parameter names. */ + char * name; /* The name this function is registered as. */ + arg_pack_type * params; /* The parameter values registered for this function. */ + transform_ftype * func; /* A pointer to the actual transformation function. */ + validate_ftype * validate; /* A pointer to a a function which can be used to validate the parameters - can be NULL. */ + stringlist_type * param_names; /* A list of the parameter names. */ + bool use_log; }; @@ -182,6 +183,7 @@ static trans_func_type * trans_func_alloc_empty( const char * func_name ) { trans_func->validate = NULL; trans_func->name = util_alloc_string_copy( func_name ); trans_func->param_names = stringlist_alloc_new(); + trans_func->use_log = false; return trans_func; } @@ -277,6 +279,7 @@ trans_func_type * trans_func_alloc( const char * func_name ) { arg_pack_append_double( trans_func->params , 0 ); arg_pack_append_double( trans_func->params , 0 ); trans_func->func = trans_lognormal; + trans_func->use_log = true; } if (util_string_equal( func_name , "TRUNCATED_NORMAL")) { @@ -351,6 +354,7 @@ trans_func_type * trans_func_alloc( const char * func_name ) { arg_pack_append_double( trans_func->params , 0 ); arg_pack_append_double( trans_func->params , 0 ); trans_func->func = trans_logunif; + trans_func->use_log = true; } @@ -377,7 +381,9 @@ double trans_func_eval( const trans_func_type * trans_func , double x) { return y; } - +bool trans_func_use_log_scale(const trans_func_type * trans_func) { + return trans_func->use_log; +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt index 1445987240..d5d3104418 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt @@ -12,12 +12,61 @@ add_executable( enkf_plot_data enkf_plot_data.c ) target_link_libraries( enkf_plot_data enkf test_util ) add_test( enkf_plot_data ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_data) +add_executable( enkf_gen_data_config enkf_gen_data_config.c ) +target_link_libraries( enkf_gen_data_config enkf test_util ) +add_test( enkf_gen_data_config ${EXECUTABLE_OUTPUT_PATH}/enkf_gen_data_config) + +add_executable( enkf_gen_obs_load enkf_gen_obs_load.c ) +target_link_libraries( enkf_gen_obs_load enkf test_util ) +add_test( enkf_gen_obs_load ${EXECUTABLE_OUTPUT_PATH}/enkf_gen_obs_load ${PROJECT_SOURCE_DIR}/test-data/local/config/gen_data/config ) + +add_executable( enkf_gen_data_config_parse enkf_gen_data_config_parse.c ) +target_link_libraries( enkf_gen_data_config_parse enkf test_util ) +add_test( enkf_gen_data_config_parse ${EXECUTABLE_OUTPUT_PATH}/enkf_gen_data_config_parse) + +add_executable( enkf_enkf_config_node_gen_data enkf_enkf_config_node_gen_data.c ) +target_link_libraries( enkf_enkf_config_node_gen_data enkf test_util ) +add_test( enkf_enkf_config_node_gen_data ${EXECUTABLE_OUTPUT_PATH}/enkf_enkf_config_node_gen_data) + +add_executable( enkf_block_obs enkf_block_obs.c ) +target_link_libraries( enkf_block_obs enkf test_util ) +add_test( enkf_block_obs ${EXECUTABLE_OUTPUT_PATH}/enkf_block_obs ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID) + + +add_executable( enkf_ert_workflow_list enkf_ert_workflow_list.c ) +target_link_libraries( enkf_ert_workflow_list enkf test_util ) +add_test( enkf_ert_workflow_list ${EXECUTABLE_OUTPUT_PATH}/enkf_ert_workflow_list ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/SCALE_STD) + + +add_executable( enkf_obs_fs enkf_obs_fs.c ) +target_link_libraries( enkf_obs_fs enkf test_util ) +add_test( enkf_obs_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_obs_fs ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config ) + +add_executable( enkf_magic_string_in_workflows enkf_magic_string_in_workflows.c ) +target_link_libraries( enkf_magic_string_in_workflows enkf test_util ) +add_test( enkf_magic_string_in_workflows ${EXECUTABLE_OUTPUT_PATH}/enkf_magic_string_in_workflows ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config ) + +add_executable( enkf_obs_vector_fs enkf_obs_vector_fs.c ) +target_link_libraries( enkf_obs_vector_fs enkf test_util ) +add_test( enkf_obs_vector_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_obs_vector_fs ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/obs_testing/config ) + + add_executable( enkf_plot_data_fs enkf_plot_data_fs.c ) target_link_libraries( enkf_plot_data_fs enkf test_util ) add_test( enkf_plot_data_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_data_fs ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/plotData/config ) add_executable( enkf_time_map enkf_time_map.c ) target_link_libraries( enkf_time_map enkf test_util ) +add_test( enkf_time_map1 ${EXECUTABLE_OUTPUT_PATH}/enkf_time_map ) +add_test( enkf_time_map2 ${EXECUTABLE_OUTPUT_PATH}/enkf_time_map ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE + ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/ModifiedSummary/EXTRA_TSTEP + ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/ModifiedSummary/SHORT + ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/ModifiedSummary/MISSING_TSTEP ) + + +add_executable( enkf_ensemble_config enkf_ensemble_config.c ) +target_link_libraries( enkf_ensemble_config enkf test_util ) +add_test( enkf_ensemble_config ${EXECUTABLE_OUTPUT_PATH}/enkf_ensemble_config) add_executable( enkf_pca_plot enkf_pca_plot.c ) target_link_libraries( enkf_pca_plot enkf test_util) @@ -33,10 +82,16 @@ add_test( enkf_analysis ${EXECUTABLE_OUTPUT_PATH}/enkf_analysis_config) add_executable( enkf_analysis_config_ext_module enkf_analysis_config_ext_module.c ) target_link_libraries( enkf_analysis_config_ext_module enkf test_util ) + +ert_module_name( VAR_RML rml_enkf ${LIBRARY_OUTPUT_PATH} ) add_test( enkf_analysis_config_ext_module ${EXECUTABLE_OUTPUT_PATH}/enkf_analysis_config_ext_module - rml_enkf ${LIBRARY_OUTPUT_PATH}/rml_enkf.so - rmli_enkf ${LIBRARY_OUTPUT_PATH}/rmli_enkf.so ) - + rml_enkf ${VAR_RML} ) + +add_executable( enkf_analysis_config_analysis_load enkf_analysis_config_analysis_load.c ) +target_link_libraries( enkf_analysis_config_analysis_load enkf test_util) +add_test( enkf_analysis_config_analysis_load ${EXECUTABLE_OUTPUT_PATH}/enkf_analysis_config_analysis_load + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/analysis_load_config + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/analysis_load_site_config) add_executable( enkf_state_map enkf_state_map.c ) target_link_libraries( enkf_state_map enkf test_util ) @@ -82,6 +137,69 @@ add_executable( enkf_fs enkf_fs.c ) target_link_libraries( enkf_fs enkf test_util ) add_test( enkf_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_fs ) +add_executable( enkf_fs_invalidate_cache enkf_fs_invalidate_cache.c ) +target_link_libraries( enkf_fs_invalidate_cache enkf test_util ) +add_test( enkf_fs_invalidate_cache ${EXECUTABLE_OUTPUT_PATH}/enkf_fs_invalidate_cache ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config) + +add_executable( enkf_ert_test_context enkf_ert_test_context.c ) +target_link_libraries( enkf_ert_test_context enkf test_util ) +add_test( enkf_ert_test_context ${EXECUTABLE_OUTPUT_PATH}/enkf_ert_test_context + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/test_context/config + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/test_context/wf_job + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/test_context/wf_job_fail) + + +add_executable( enkf_analysis_update_job enkf_analysis_update_job.c ) +target_link_libraries( enkf_analysis_update_job enkf test_util ) +add_test( enkf_analysis_update_job ${EXECUTABLE_OUTPUT_PATH}/enkf_analysis_update_job + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/ANALYSIS_UPDATE ) + +add_executable( enkf_analysis_enkf_update_job enkf_analysis_enkf_update_job.c ) +target_link_libraries( enkf_analysis_enkf_update_job enkf test_util ) +add_test( enkf_analysis_enkf_update_job ${EXECUTABLE_OUTPUT_PATH}/enkf_analysis_enkf_update_job + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/ANALYSIS_ENKF_UPDATE ) + + +add_executable( enkf_plot_gen_kw enkf_plot_gen_kw.c ) +target_link_libraries( enkf_plot_gen_kw enkf test_util ) +add_test( enkf_plot_gen_kw ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_gen_kw ) + +add_executable( enkf_plot_gen_kw_vector enkf_plot_gen_kw_vector.c ) +target_link_libraries( enkf_plot_gen_kw_vector enkf test_util ) +add_test( enkf_plot_gen_kw_vector ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_gen_kw_vector ) + +add_executable( enkf_plot_gen_kw_fs enkf_plot_gen_kw_fs.c ) +target_link_libraries( enkf_plot_gen_kw_fs enkf test_util ) +add_test( enkf_plot_gen_kw_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_gen_kw_fs ${CMAKE_CURRENT_SOURCE_DIR}/data/config/gen_kw_plot/config ) + +add_executable( enkf_plot_genvector enkf_plot_genvector.c ) +target_link_libraries( enkf_plot_genvector enkf test_util ) +add_test( enkf_plot_genvector ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_genvector ) + +add_executable( enkf_plot_gendata_fs enkf_plot_gendata_fs.c ) +target_link_libraries( enkf_plot_gendata_fs enkf test_util ) +add_test( enkf_plot_gendata_fs ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_gendata_fs + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_GEN_DATA/config ) + +add_executable( enkf_plot_gendata enkf_plot_gendata.c ) +target_link_libraries( enkf_plot_gendata enkf test_util ) +add_test( enkf_plot_gendata ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_gendata ) + +add_executable( enkf_config_node enkf_config_node.c ) +target_link_libraries( enkf_config_node enkf test_util ) +add_test( enkf_config_node ${EXECUTABLE_OUTPUT_PATH}/enkf_config_node ) + + +#----------------------------------------------------------------- + +add_executable( gen_kw_test gen_kw_test.c ) +target_link_libraries( gen_kw_test enkf test_util ) + +add_test( gen_kw_test + ${EXECUTABLE_OUTPUT_PATH}/gen_kw_test + ${CMAKE_CURRENT_SOURCE_DIR}/data/config/forward/ert/config_GEN_KW_true) #----------------------------------------------------------------- @@ -111,6 +229,13 @@ add_test( enkf_state_report_step_compatible_FALSE #----------------------------------------------------------------- +add_executable( enkf_state_manual_load_test enkf_state_manual_load_test.c ) +target_link_libraries( enkf_state_manual_load_test enkf test_util ) +add_test( enkf_state_manual_load_test ${EXECUTABLE_OUTPUT_PATH}/enkf_state_manual_load_test ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/ecl_sum_compatible_true config_ecl_sum_compatible_true) + +#----------------------------------------------------------------- + + add_executable( enkf_state_skip_summary_load_test enkf_state_skip_summary_load_test.c ) target_link_libraries( enkf_state_skip_summary_load_test enkf test_util ) @@ -128,7 +253,38 @@ add_executable( enkf_export_field_test enkf_export_field_test.c ) target_link_libraries( enkf_export_field_test enkf test_util ) add_test( enkf_export_field_test - ${EXECUTABLE_OUTPUT_PATH}/enkf_export_field_test ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/export_fields config ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config) + ${EXECUTABLE_OUTPUT_PATH}/enkf_export_field_test ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/export_fields/config + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/EXPORT_FIELD + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/EXPORT_FIELD_ECL_GRDECL + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/EXPORT_FIELD_RMS_ROFF) + + + +add_executable( enkf_workflow_job_test enkf_workflow_job_test.c ) +target_link_libraries( enkf_workflow_job_test enkf test_util ) + +add_test( enkf_workflow_job_test + ${EXECUTABLE_OUTPUT_PATH}/enkf_workflow_job_test ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/with_data/config + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/enkf_state_runpath/config_runpath_multiple_iterations + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal-tui/config/CREATE_CASE + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal-tui/config/INIT_CASE_FROM_EXISTING + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/LOAD_RESULTS + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/LOAD_RESULTS_ITER + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/OBSERVATION_RANKING + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/DATA_RANKING + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/EXPORT_RANKING + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/INIT_MISFIT_TABLE + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal/config/EXPORT_RUNPATH) + + + +add_executable( enkf_select_case_job enkf_select_case_job.c ) +target_link_libraries( enkf_select_case_job enkf test_util ) + +add_test( enkf_select_case_job + ${EXECUTABLE_OUTPUT_PATH}/enkf_select_case_job + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/export_fields/config + ${PROJECT_SOURCE_DIR}/share/workflows/jobs/internal-tui/config/SELECT_CASE) #----------------------------------------------------------------- @@ -181,11 +337,47 @@ add_test( enkf_forward_init_FIELD_FALSE #----------------------------------------------------------------- +add_executable( enkf_forward_init_transform enkf_forward_init_transform.c ) +target_link_libraries( enkf_forward_init_transform enkf test_util ) + +add_test( enkf_forward_init_transform_TRUE + ${EXECUTABLE_OUTPUT_PATH}/enkf_forward_init_transform + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/transform transform_forward_init_true + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/transform/petro.grdecl + TRUE) + +add_test( enkf_forward_init_transform_FALSE + ${EXECUTABLE_OUTPUT_PATH}/enkf_forward_init_transform + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/transform transform_forward_init_false + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/transform/petro.grdecl + FALSE) + +#----------------------------------------------------------------- + +add_executable( enkf_export_inactive_cells enkf_export_inactive_cells.c ) +target_link_libraries( enkf_export_inactive_cells enkf test_util ) + +add_test( enkf_export_inactive_cells + ${EXECUTABLE_OUTPUT_PATH}/enkf_export_inactive_cells + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/export_inactive_cells/config + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/export_inactive_cells/petro.grdecl) + +#----------------------------------------------------------------- + add_executable( enkf_iter_config enkf_iter_config.c ) target_link_libraries( enkf_iter_config enkf test_util ) add_test( enkf_iter_config ${EXECUTABLE_OUTPUT_PATH}/enkf_iter_config ) + +add_executable( enkf_state_runpath_test enkf_state_runpath_test.c ) +target_link_libraries( enkf_state_runpath_test enkf test_util ) +add_test( enkf_state_runpath_test ${EXECUTABLE_OUTPUT_PATH}/enkf_state_runpath_test + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/enkf_state_runpath + config_runpath_single_run + config_runpath_multiple_iterations ) + + add_executable( enkf_model_config enkf_model_config.c ) target_link_libraries( enkf_model_config enkf test_util ) add_test( enkf_model_config ${EXECUTABLE_OUTPUT_PATH}/enkf_model_config ) @@ -228,10 +420,9 @@ add_executable(obs_vector_tests obs_vector_tests.c) target_link_libraries(obs_vector_tests enkf test_util ) add_test(obs_vector_tests ${EXECUTABLE_OUTPUT_PATH}/obs_vector_tests) -add_test( enkf_runpath_list ${EXECUTABLE_OUTPUT_PATH}/enkf_runpath_list ) +add_test( enkf_runpath_list ${EXECUTABLE_OUTPUT_PATH}/enkf_runpath_list ${CMAKE_CURRENT_SOURCE_DIR}/data/config/runpath_list/config ) add_test( enkf_site_config ${EXECUTABLE_OUTPUT_PATH}/enkf_site_config /project/res/etc/ERT/site-config) -add_test( enkf_time_map1 ${EXECUTABLE_OUTPUT_PATH}/enkf_time_map ) -add_test( enkf_time_map2 ${EXECUTABLE_OUTPUT_PATH}/enkf_time_map ${PROJECT_SOURCE_DIR}/test-data/Statoil/ECLIPSE/Gurbat/ECLIPSE.UNRST ) + add_test( enkf_ensemble_GEN_PARAM ${EXECUTABLE_OUTPUT_PATH}/enkf_ensemble_GEN_PARAM ${CMAKE_CURRENT_SOURCE_DIR}/data/ensemble/GEN_PARAM ) add_test( enkf_ensemble ${EXECUTABLE_OUTPUT_PATH}/enkf_ensemble ) add_test( enkf_state_map ${EXECUTABLE_OUTPUT_PATH}/enkf_state_map ) @@ -246,8 +437,23 @@ set_property( TEST enkf_forward_init_SURFACE_FALSE PROPERTY LABELS StatoilData set_property( TEST enkf_forward_init_SURFACE_TRUE PROPERTY LABELS StatoilData ) set_property( TEST enkf_forward_init_FIELD_FALSE PROPERTY LABELS StatoilData ) set_property( TEST enkf_forward_init_FIELD_TRUE PROPERTY LABELS StatoilData ) +set_property( TEST enkf_forward_init_transform_TRUE PROPERTY LABELS StatoilData ) +set_property( TEST enkf_forward_init_transform_FALSE PROPERTY LABELS StatoilData ) set_property( TEST enkf_main_fs PROPERTY LABELS StatoilData ) set_property( TEST enkf_state_summary_vars_present PROPERTY LABELS StatoilData ) set_property( TEST enkf_state_no_summary_vars_present PROPERTY LABELS StatoilData ) set_property( TEST enkf_export_field_test PROPERTY LABELS StatoilData ) +set_property( TEST enkf_workflow_job_test PROPERTY LABELS StatoilData ) +set_property( TEST enkf_select_case_job PROPERTY LABELS StatoilData ) set_property( TEST enkf_main_fs_current_file_test PROPERTY LABELS StatoilData ) +set_property( TEST enkf_state_runpath_test PROPERTY LABELS StatoilData ) +set_property( TEST enkf_state_manual_load_test PROPERTY LABELS StatoilData ) +set_property( TEST enkf_analysis_update_job PROPERTY LABELS StatoilData ) +set_property( TEST enkf_analysis_enkf_update_job PROPERTY LABELS StatoilData ) +set_property( TEST enkf_block_obs PROPERTY LABELS StatoilData ) +set_property( TEST enkf_plot_gendata_fs PROPERTY LABELS StatoilData ) +set_property( TEST enkf_export_inactive_cells PROPERTY LABELS StatoilData ) +set_property( TEST enkf_fs_invalidate_cache PROPERTY LABELS StatoilData ) +set_property( TEST enkf_obs_fs PROPERTY LABELS StatoilData ) +set_property( TEST enkf_obs_vector_fs PROPERTY LABELS StatoilData ) +set_property( TEST enkf_magic_string_in_workflows PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_config b/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_config new file mode 100644 index 0000000000..657ba148c3 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_config @@ -0,0 +1 @@ +NUM_REALIZATIONS 3 diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_site_config b/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_site_config new file mode 100644 index 0000000000..c7be2f143e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/analysis_load_site_config @@ -0,0 +1,2 @@ +ANALYSIS_LOAD RML_ENKF_SITE_CONFIG1 rml_enkf.so +ANALYSIS_LOAD RML_ENKF_SITE_CONFIG2 rml_enkf.so diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Parameters.txt b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Parameters.txt new file mode 100644 index 0000000000..ba7f5b2386 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Parameters.txt @@ -0,0 +1,5 @@ +PARAM1 CONST 100 +PARAM2 UNIFORM 0 1 +PARAM3 LOGUNIF 0.001 1000 +PARAM4 LOGNORMAL 0.25 100 + diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Template.tmpl b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Template.tmpl new file mode 100644 index 0000000000..ff8e16240d --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/Template.tmpl @@ -0,0 +1 @@ +-- Template; not used \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/config b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/config new file mode 100644 index 0000000000..f043581fe5 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/gen_kw_plot/config @@ -0,0 +1,2 @@ +NUM_REALIZATIONS 25 +GEN_KW GEN_KW Template.tmpl Target.inc Parameters.txt \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_JOB b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_JOB new file mode 100644 index 0000000000..9cd8129c85 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_JOB @@ -0,0 +1,2 @@ +INTERNAL FALSE +EXECUTABLE arg_echo.sh diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_WF b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_WF new file mode 100644 index 0000000000..2eef71ca9b --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/ARGECHO_WF @@ -0,0 +1 @@ +ARGECHO_JOB runpath_list.txt \ No newline at end of file diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/arg_echo.sh b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/arg_echo.sh new file mode 100644 index 0000000000..e7fffa0c13 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/arg_echo.sh @@ -0,0 +1,3 @@ +#!/bin/sh + +echo $1 > $2 diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/config b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/config new file mode 100644 index 0000000000..ded46130bb --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/runpath_list/config @@ -0,0 +1,5 @@ +RUNPATH_FILE runpath/runpath-file.txt +NUM_REALIZATIONS 10 + +LOAD_WORKFLOW_JOB ARGECHO_JOB +LOAD_WORKFLOW ARGECHO_WF diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/FAULT_TEMPLATE b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/FAULT_TEMPLATE new file mode 100644 index 0000000000..de1f12ca5b --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/FAULT_TEMPLATE @@ -0,0 +1 @@ + diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/MULTFLT.TXT b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/MULTFLT.TXT new file mode 100644 index 0000000000..c193c48528 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/MULTFLT.TXT @@ -0,0 +1 @@ +MULTFLT NORMAL 0 1 diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/config b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/config new file mode 100644 index 0000000000..7e702c6b14 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/config @@ -0,0 +1,11 @@ +JOBNAME Job%d +RUNPATH simulations/run%d +NUM_REALIZATIONS 1 + +ENSPATH Storage +JOB_SCRIPT script.sh + +GEN_KW MULTFLT FAULT_TEMPLATE MULTFLT.INC MULTFLT.TXT INIT_FILES:MULTFLT_INIT FORWARD_INIT:TRUE + + +SUMMARY RPR:8 diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/script.sh b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/script.sh new file mode 100644 index 0000000000..2f92a600cf --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/script.sh @@ -0,0 +1 @@ +# Completlely stupid - an executable must be present for the testing. diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job new file mode 100644 index 0000000000..ed3a5838fb --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job @@ -0,0 +1,5 @@ +INTERNAL True +FUNCTION enkf_main_select_case_JOB +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING diff --git a/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job_fail b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job_fail new file mode 100644 index 0000000000..b8d5206384 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/data/config/test_context/wf_job_fail @@ -0,0 +1,5 @@ +INTERNAL True +FUNCTION unknown_function__ +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config.c index a93b5dca53..b974eb0bdb 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config.c @@ -21,10 +21,13 @@ #include #include +#include #include #include #include +#include +#include analysis_config_type * create_analysis_config() { @@ -41,6 +44,37 @@ void test_create() { } +void test_min_realizations_percent(const char * num_realizations_str, const char * min_realizations_str, int min_realizations){ + test_work_area_type * work_area = test_work_area_alloc("test_min_realizations"); + + { + FILE * config_file_stream = util_mkdir_fopen("config_file", "w"); + test_assert_not_NULL(config_file_stream); + fprintf(config_file_stream, num_realizations_str); + fprintf(config_file_stream, min_realizations_str); + fclose(config_file_stream); + + config_type * c = config_alloc(); + config_schema_item_type * item = config_add_schema_item(c , NUM_REALIZATIONS_KEY , true ); + config_schema_item_set_default_type(item, CONFIG_INT); + config_schema_item_set_argc_minmax( item , 1 , 1); + item = config_add_schema_item(c , MIN_REALIZATIONS_KEY , false ); + config_schema_item_set_argc_minmax( item , 1 , 2); + test_assert_true(config_parse(c , "config_file" , "--" , NULL , NULL , false , true )); + + analysis_config_type * ac = create_analysis_config( ); + analysis_config_init(ac, c); + + test_assert_int_equal( min_realizations , analysis_config_get_min_realisations( ac ) ); + + analysis_config_free( ac ); + config_free( c ); + } + + test_work_area_free(work_area); +} + + void test_min_realisations( ) { analysis_config_type * ac = create_analysis_config( ); @@ -100,6 +134,43 @@ int main(int argc , char ** argv) { test_create(); test_min_realisations(); test_continue(); + + { + const char * num_realizations_str = "NUM_REALIZATIONS 80\n"; + const char * min_realizations_str = "MIN_REALIZATIONS 10%%\n"; + int min_realizations = 8; + test_min_realizations_percent(num_realizations_str, min_realizations_str, min_realizations); + } + { + const char * num_realizations_str = "NUM_REALIZATIONS 8\n"; + const char * min_realizations_str = "MIN_REALIZATIONS 50%%\n"; + int min_realizations = 4; + test_min_realizations_percent(num_realizations_str, min_realizations_str, min_realizations); + } + { + const char * num_realizations_str = "NUM_REALIZATIONS 80\n"; + const char * min_realizations_str = "MIN_REALIZATIONS 2\n"; + int min_realizations = 2; + test_min_realizations_percent(num_realizations_str, min_realizations_str, min_realizations); + } + { + const char * num_realizations_str = "NUM_REALIZATIONS 8\n"; + const char * min_realizations_str = "MIN_REALIZATIONS 10%%\n"; + int min_realizations = 0; + test_min_realizations_percent(num_realizations_str, min_realizations_str, min_realizations); + } + { + const char * num_realizations_str = "NUM_REALIZATIONS 900\n"; + const char * min_realizations_str = "MIN_REALIZATIONS 10 \n"; + int min_realizations = 10; + test_min_realizations_percent(num_realizations_str, min_realizations_str, min_realizations); + } + { + const char * num_realizations_str = "NUM_REALIZATIONS 900\n"; + int min_realizations = 0; + test_min_realizations_percent(num_realizations_str, "", min_realizations); + } + test_current_module_options(); test_stop_long_running(); exit(0); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config_analysis_load.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config_analysis_load.c new file mode 100644 index 0000000000..dcbb5128c9 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_config_analysis_load.c @@ -0,0 +1,49 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_analysis_config_analysis_load.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include + +#include +#include + +#include +#include + +int main(int argc , const char ** argv) { + const char * config_file = argv[1]; + const char * site_config_file = argv[2]; + + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisLoadFromSiteConfig" , config_file, site_config_file); + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + + test_assert_true(analysis_config_has_module(enkf_main_get_analysis_config(enkf_main), "RML_ENKF_SITE_CONFIG1")); + analysis_module_type * analysis_module = analysis_config_get_module(enkf_main_get_analysis_config(enkf_main), "RML_ENKF_SITE_CONFIG1"); + test_assert_string_equal(analysis_module_get_name(analysis_module), "RML_ENKF_SITE_CONFIG1"); + + test_assert_true(analysis_config_has_module(enkf_main_get_analysis_config(enkf_main), "RML_ENKF_SITE_CONFIG2")); + analysis_module_type * analysis_module2 = analysis_config_get_module(enkf_main_get_analysis_config(enkf_main), "RML_ENKF_SITE_CONFIG2"); + test_assert_string_equal(analysis_module_get_name(analysis_module2), "RML_ENKF_SITE_CONFIG2"); + + ert_test_context_free(test_context); +} + + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_enkf_update_job.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_enkf_update_job.c new file mode 100644 index 0000000000..b052507126 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_enkf_update_job.c @@ -0,0 +1,71 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_analysis_update_job.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include +#include + + +void test_update_default(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob0" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "20" ); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + + +void test_update_selected_step(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob2" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "50" ); + stringlist_append_copy( args , "10" ); + stringlist_append_copy( args , ",20" ); + stringlist_append_copy( args , ",30-50" ); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + const char * job_file = argv[2]; + + test_update_default( config_file , job_file); + test_update_selected_step( config_file , job_file ); + + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_update_job.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_update_job.c new file mode 100644 index 0000000000..919dc5d2c0 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_analysis_update_job.c @@ -0,0 +1,99 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_analysis_update_job.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include +#include + + +void test_update_default(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob0" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + +void test_update_new_case(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob1" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "NewCase" ); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + +void test_update_new_case_step(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob2" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "NewCase" ); + stringlist_append_copy( args , "20" ); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + +void test_update_new_case_step_selected(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("AnalysisJob2" , config_file , NULL); + + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "NewCase" ); + stringlist_append_copy( args , "20" ); + stringlist_append_copy( args , "10" ); + stringlist_append_copy( args , ",20" ); + stringlist_append_copy( args , ",30-50" ); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + stringlist_free( args ); + + ert_test_context_free( test_context ); +} + + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + const char * job_file = argv[2]; + + test_update_default( config_file , job_file); + test_update_new_case( config_file , job_file ); + test_update_new_case_step( config_file , job_file ); + test_update_new_case_step_selected( config_file , job_file ); + + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_block_obs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_block_obs.c new file mode 100644 index 0000000000..774470a7ff --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_block_obs.c @@ -0,0 +1,79 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_blockdata.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include + +#include +#include +#include + + +void test_create_invalid_data(ecl_grid_type * grid) { + void * data_config = NULL; + test_assert_NULL(block_obs_alloc( "ObsKey" , data_config , grid )); +} + + + +void test_create_from_field(ecl_grid_type * grid) { + field_config_type * field_config = field_config_alloc_empty( "PRESSURE" , grid , NULL, false ); + block_obs_type * block_obs = block_obs_alloc( "ObsKey" , field_config , grid ); + + test_assert_true( block_obs_is_instance( block_obs )); + test_assert_int_equal(0 , block_obs_get_size( block_obs )); + block_obs_append_field_obs( block_obs , 10 , 12 , 8 , 100 , 25); + test_assert_int_equal(1 , block_obs_get_size( block_obs )); + block_obs_append_field_obs( block_obs , 10 , 12 , 9 , 100 , 25); + test_assert_int_equal(2 , block_obs_get_size( block_obs )); + block_obs_free( block_obs ); + field_config_free( field_config ); +} + + +void test_create_from_summary(ecl_grid_type * grid) { + container_config_type * container_config = container_config_alloc( "Container"); + block_obs_type * block_obs = block_obs_alloc( "ObsKey" , container_config , grid ); + + test_assert_true( block_obs_is_instance( block_obs )); + test_assert_int_equal(0 , block_obs_get_size( block_obs )); + + + block_obs_append_summary_obs( block_obs , 10 , 12 , 8 , "BPR:111,13,9" , 100 , 25); + test_assert_int_equal(1 , block_obs_get_size( block_obs )); + block_obs_append_summary_obs( block_obs , 10 , 12 , 9 , "BPR:11,13,10" , 100 , 25); + test_assert_int_equal(2 , block_obs_get_size( block_obs )); + block_obs_free( block_obs ); + + container_config_free( container_config ); +} + + + +int main (int argc , char ** argv) { + ecl_grid_type * grid = ecl_grid_alloc( argv[1] ); + { + test_create_invalid_data( grid ); + test_create_from_field(grid); + test_create_from_summary( grid); + } + ecl_grid_free( grid ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_config_node.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_config_node.c new file mode 100644 index 0000000000..ecec479dfe --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_config_node.c @@ -0,0 +1,31 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_config_node.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include + +#include + +#include +#include + + + + +int main(int argc , char ** argv) { + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_enkf_config_node_gen_data.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_enkf_config_node_gen_data.c new file mode 100644 index 0000000000..512762187a --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_enkf_config_node_gen_data.c @@ -0,0 +1,36 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_enkf_config_node_gen_data.c' is part of ERT - + Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include + +#include + + +void test_create() { + enkf_config_node_type * node = enkf_config_node_alloc_GEN_PARAM("key" , false, ASCII , ASCII , "init%d" , "out.txt"); + enkf_config_node_free( node ); +} + + + +int main( int argc , char **argv ) { + test_create(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble.c index 0c8298781a..47449143cc 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble.c @@ -39,7 +39,7 @@ int main(int argc , char ** argv) { - ensemble_config_type * ensemble = ensemble_config_alloc_empty(); + ensemble_config_type * ensemble = ensemble_config_alloc(); ensemble_config_free( ensemble ); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_GEN_PARAM.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_GEN_PARAM.c index d515d6fa40..15cd8f4c25 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_GEN_PARAM.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_GEN_PARAM.c @@ -41,9 +41,9 @@ int main(int argc , char ** argv) { const char * config_file = argv[1]; config_type * config = config_alloc(); - ensemble_config_type * ensemble = ensemble_config_alloc_empty(); + ensemble_config_type * ensemble = ensemble_config_alloc(); - ensemble_config_add_GEN_PARAM_config_item( config ); + enkf_config_node_add_GEN_PARAM_config_schema( config ); test_assert_true( config_parse( config , config_file , "--" , NULL , NULL , CONFIG_UNRECOGNIZED_WARN , true ) ); ensemble_config_init_GEN_PARAM( ensemble, config ); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_config.c new file mode 100644 index 0000000000..5426b1336e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ensemble_config.c @@ -0,0 +1,50 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_gen_data_config_parse.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include +#include + +#include + +#include + +void add_NULL_node( void * arg) { + ensemble_config_type * ens_config = ensemble_config_safe_cast( arg ); + ensemble_config_add_node( ens_config , NULL ); +} + + + +void test_abort_on_add_NULL() { + ensemble_config_type * ensemble_config = ensemble_config_alloc(); + + test_assert_true( ensemble_config_is_instance( ensemble_config )); + test_assert_util_abort("ensemble_config_add_node" , add_NULL_node , ensemble_config ); + + ensemble_config_free( ensemble_config ); +} + + +int main( int argc , char ** argv) { + test_abort_on_add_NULL(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_test_context.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_test_context.c new file mode 100644 index 0000000000..0143841b32 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_test_context.c @@ -0,0 +1,153 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_ert_test_context.c' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + + + +#include +#include + + + + +void test_create_invalid(const char * config_file) { + char * cwd0 = util_alloc_cwd(); + ert_test_context_type * test_context = ert_test_context_alloc("CREATE_CONTEXT" , config_file , NULL ); + test_assert_true( ert_test_context_is_instance( test_context )); + test_assert_NULL( ert_test_context_get_main( test_context )); + { + char * cwd1 = util_alloc_cwd(); + test_assert_string_equal(cwd1 , cwd0); + free( cwd1 ); + } + free( cwd0 ); + ert_test_context_free( test_context ); +} + + + +void test_create_valid( const char * config_file ) { + char * cwd0 = util_alloc_cwd(); + ert_test_context_type * test_context = ert_test_context_alloc("CREATE_CONTEXT" , config_file , NULL ); + test_assert_true( ert_test_context_is_instance( test_context )); + test_assert_true( enkf_main_is_instance( ert_test_context_get_main( test_context ))); + { + char * cwd1 = util_alloc_cwd(); + test_assert_string_not_equal(cwd1 , cwd0); + free( cwd1 ); + } + free( cwd0 ); + ert_test_context_free( test_context ); +} + + + +void test_install_job( const char * config_file, const char * job_file_OK , const char * job_file_ERROR) { + ert_test_context_type * test_context = ert_test_context_alloc("CREATE_CONTEXT_JOB" , config_file , NULL ); + + test_assert_false( ert_test_context_install_workflow_job( test_context , "JOB" , "File/does/not/exist")); + test_assert_false( ert_test_context_install_workflow_job( test_context , "ERROR" , job_file_ERROR)); + test_assert_true( ert_test_context_install_workflow_job( test_context , "OK" , job_file_OK)); + + ert_test_context_free( test_context ); +} + + + +void test_run_workflow_job( const char * config_file , const char * job_file ) { + ert_test_context_type * test_context = ert_test_context_alloc("CREATE_CONTEXT_JOB" , config_file , NULL ); + stringlist_type * args0 = stringlist_alloc_new( ); + stringlist_type * args1 = stringlist_alloc_new( ); + + stringlist_append_ref( args1 , "NewCase"); + test_assert_false( ert_test_context_run_worklow_job( test_context , "NO-this-does-not-exist" , args1)); + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + + test_assert_false( ert_test_context_run_worklow_job( test_context , "JOB" , args0)); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args1)); + + stringlist_free( args0 ); + stringlist_free( args1 ); + ert_test_context_free( test_context ); +} + + +void test_install_workflow( const char * config_file , const char * job_file ) { + ert_test_context_type * test_context = ert_test_context_alloc("INSTALL_WORKFLOW" , config_file , NULL ); + const char * wf_file = "WFLOW"; + + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + { + FILE * stream = util_fopen( wf_file , "w"); + stringlist_type * args = stringlist_alloc_new( ); + stringlist_append_ref( args , "NewCase"); + ert_test_context_fwrite_workflow_job( stream , "JOB" , args); + stringlist_free( args ); + fclose( stream ); + } + test_assert_true( ert_test_context_install_workflow( test_context , "WFLOW" , wf_file )); + ert_test_context_free( test_context ); +} + + +void test_run_workflow(const char * config_file , const char * job_file) { + ert_test_context_type * test_context = ert_test_context_alloc("INSTALL_WORKFLOW" , config_file , NULL ); + test_assert_false( ert_test_context_run_worklow( test_context , "No-does.not.exist")); + + ert_test_context_install_workflow_job( test_context , "JOB" , job_file ); + { + FILE * stream1 = util_fopen( "WFLOW1", "w"); + FILE * stream2 = util_fopen( "WFLOW2", "w"); + stringlist_type * args = stringlist_alloc_new( ); + ert_test_context_fwrite_workflow_job( stream1 , "JOB" , args); + stringlist_append_ref( args , "NewCase"); + ert_test_context_fwrite_workflow_job( stream2 , "JOB" , args); + + stringlist_free( args ); + fclose( stream1 ); + fclose( stream2 ); + } + test_assert_true( ert_test_context_install_workflow( test_context , "WFLOW1" , "WFLOW1")); + test_assert_true( ert_test_context_install_workflow( test_context , "WFLOW2" , "WFLOW2")); + + test_assert_true( ert_test_context_run_worklow( test_context , "WFLOW2")); + test_assert_false( ert_test_context_run_worklow( test_context , "WFLOW1")); + + ert_test_context_free( test_context ); +} + + + + + + +int main( int argc , char ** argv) { + char * config_file = argv[1]; + char * wf_job_fileOK = argv[2]; + char * wf_job_fileERROR = argv[3]; + + test_create_invalid( "DoesNotExist" ); + test_create_valid( config_file ); + test_install_job( config_file , wf_job_fileOK, wf_job_fileERROR ); + test_install_workflow( config_file , wf_job_fileOK); + test_run_workflow( config_file , wf_job_fileOK); + test_run_workflow_job( config_file , wf_job_fileOK); +} + + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_workflow_list.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_workflow_list.c new file mode 100644 index 0000000000..e8bca24d56 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_workflow_list.c @@ -0,0 +1,86 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_ert_workflow_list.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include + + + +void test_create_workflow_list() { + ert_workflow_list_type * wf_list = ert_workflow_list_alloc( NULL ); + test_assert_true( ert_workflow_list_is_instance( wf_list )); + ert_workflow_list_free( wf_list ); +} + + + +void test_add_alias( const char * job) { + test_work_area_type * work_area = test_work_area_alloc( "workflow_list/alias" ); + ert_workflow_list_type * wf_list = ert_workflow_list_alloc( NULL ); + ert_workflow_list_add_job( wf_list , "JOB" , job ); + + { + FILE * stream = util_fopen("WF1" , "w"); + fprintf(stream , "SCALE_STD 0.25\n"); + fclose(stream); + } + + + { + FILE * stream = util_fopen("WF2" , "w"); + fprintf(stream , "SCALE_STD 0.25\n"); + fclose(stream); + } + + test_assert_true( workflow_is_instance( ert_workflow_list_add_workflow( wf_list , "WF1" , "WF"))); + test_assert_int_equal( 1 , ert_workflow_list_get_size( wf_list )); + test_assert_false( ert_workflow_list_has_workflow( wf_list , "WF1")); + test_assert_true( ert_workflow_list_has_workflow( wf_list , "WF")); + + ert_workflow_list_add_alias( wf_list , "WF" , "alias"); + test_assert_int_equal( 2 , ert_workflow_list_get_size( wf_list )); + test_assert_true( ert_workflow_list_has_workflow( wf_list , "WF")); + test_assert_true( ert_workflow_list_has_workflow( wf_list , "alias")); + test_assert_true( workflow_is_instance( ert_workflow_list_get_workflow( wf_list , "WF"))); + test_assert_true( workflow_is_instance( ert_workflow_list_get_workflow( wf_list , "alias"))); + + test_assert_true( workflow_is_instance( ert_workflow_list_add_workflow( wf_list , "WF2" , "WF"))); + test_assert_int_equal( 2 , ert_workflow_list_get_size( wf_list )); + test_assert_true( ert_workflow_list_has_workflow( wf_list , "WF")); + test_assert_true( ert_workflow_list_has_workflow( wf_list , "alias")); + test_assert_true( workflow_is_instance( ert_workflow_list_get_workflow( wf_list , "WF"))); + test_assert_true( workflow_is_instance( ert_workflow_list_get_workflow( wf_list , "alias"))); + + test_work_area_free( work_area ); +} + + +int main(int argc , char ** argv) { + const char * job = argv[1]; + test_create_workflow_list(); + test_add_alias(job); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_export_field_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_field_test.c index 40e59f01c8..5512df209e 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_export_field_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_field_test.c @@ -22,58 +22,114 @@ #include #include +#include + #include #include -#include -#include -#include + + +void test_export_field(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + + test_assert_true( ert_test_context_install_workflow_job( test_context , job_name , job_file )); + { + stringlist_type * args = stringlist_alloc_new(); + + stringlist_append_copy(args, "PERMZ"); + stringlist_append_copy(args, "TEST_EXPORT/test_export_field/PermZ%d.grdecl"); + stringlist_append_copy(args, "0"); + stringlist_append_copy(args, "FORECAST"); + stringlist_append_copy(args, "0, 2"); + + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + stringlist_free( args ); + } + test_assert_true( util_file_exists("TEST_EXPORT/test_export_field/PermZ0.grdecl") ); + test_assert_true( util_file_exists("TEST_EXPORT/test_export_field/PermZ2.grdecl") ); +} + + +void job_file_export_field_ecl_grdecl(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + { + stringlist_type * args = stringlist_alloc_new(); + + stringlist_append_copy(args, "PERMX"); + stringlist_append_copy(args, "TEST_EXPORT/test_export_field_ecl_grdecl/PermX%d.grdecl"); + stringlist_append_copy(args, "0"); + stringlist_append_copy(args, "ANALYZED"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy(args, "PERMZ"); + stringlist_append_copy(args, "TEST_EXPORT/test_export_field_ecl_grdecl/PermZ%d"); + stringlist_append_copy(args, "0"); + stringlist_append_copy(args, "FORECAST"); + stringlist_append_copy(args, "0-1"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX0.grdecl")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX1.grdecl")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX2.grdecl")); + + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermZ0")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermZ1")); + + stringlist_free( args ); + } +} + + +void job_file_export_field_rms_roff(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + test_assert_true( ert_test_context_install_workflow_job( test_context , job_name , job_file ) ); + { + stringlist_type * args = stringlist_alloc_new(); + + stringlist_append_copy(args, "PERMZ"); + stringlist_append_copy(args, "TEST_EXPORT/test_export_field_rms_roff/PermZ%d"); + stringlist_append_copy(args, "0"); + stringlist_append_copy(args, "ANALYZED"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy(args, "PERMX"); + stringlist_append_copy(args, "TEST_EXPORT/test_export_field_rms_roff/PermX%d.roff"); + stringlist_append_copy(args, "0"); + stringlist_append_copy(args, "FORECAST"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ0")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ1")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ2")); + + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX0.roff")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX1.roff")); + test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX2.roff")); + + stringlist_free( args ); + } +} + int main(int argc , const char ** argv) { enkf_main_install_SIGNALS(); - - const char * config_path = argv[1]; - const char * config_file = argv[2]; - const char * job_dir_path = argv[3]; - - test_work_area_type * work_area = test_work_area_alloc(config_file ); - test_work_area_set_store(work_area, true); - test_work_area_copy_directory_content( work_area , config_path ); - - enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , true , true ); - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc(3, true); - enkf_main_init_run(enkf_main , iactive, run_mode , INIT_FORCE); /* This is ugly */ - bool_vector_free(iactive); - - ert_workflow_list_type * workflow_list = enkf_main_get_workflow_list(enkf_main); - log_type * logh = enkf_main_get_logh(enkf_main); - ert_workflow_list_add_jobs_in_directory(workflow_list, job_dir_path, logh); - - test_assert_true(ert_workflow_list_has_workflow( workflow_list , "EXPORT_FIELDS" )); - - test_assert_true(ert_workflow_list_run_workflow(workflow_list , "EXPORT_FIELDS" , enkf_main)); - - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field/PermZ0.grdecl")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field/PermZ2.grdecl")); - - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ0.roff")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ1.roff")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermZ2.roff")); - - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX0.roff")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX1.roff")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_rms_roff/PermX2.roff")); - - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX0.grdecl")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX1.grdecl")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermX2.grdecl")); - - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermZ0.grdecl")); - test_assert_true(util_file_exists("TEST_EXPORT/test_export_field_ecl_grdecl/PermZ1.grdecl")); - - enkf_main_free( enkf_main ); - test_work_area_free(work_area); + + const char * config_file = argv[1]; + const char * job_file_export_field = argv[2]; + const char * job_file_export_field_ecl_grdecl = argv[3]; + const char * job_file_export_field_rms_roff = argv[4]; + + ert_test_context_type * test_context = ert_test_context_alloc("ExportFieldsJobs" , config_file , NULL); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + + enkf_main_select_fs( enkf_main , "default" ); + { + test_export_field(test_context, "JOB1" , job_file_export_field); + test_export_field(test_context, "JOB2" , job_file_export_field_ecl_grdecl); + test_export_field(test_context, "JOB3" , job_file_export_field_rms_roff); + } + ert_test_context_free( test_context ); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c new file mode 100644 index 0000000000..6da2da06ef --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c @@ -0,0 +1,202 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_export_inactive_cells.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include +#include +#include +#include +#include +#include + + +void check_exported_data(const char * exported_file, + const char * init_file, + field_file_format_type file_type, + const field_config_type * field_config, + const field_type * field, + int nx, + int ny, + int nz) { + + FILE * original_stream = NULL; + ecl_kw_type * kw_original = NULL; + FILE * exported_stream = NULL; + ecl_kw_type * kw_exported = NULL; + field_type * exported_field = NULL; + field_config_type * exported_field_config = NULL; + + { + if (init_file) { + original_stream = util_fopen( init_file , "r"); + kw_original = ecl_kw_fscanf_alloc_grdecl_dynamic( original_stream , field_config_get_key(field_config) , ECL_DOUBLE_TYPE ); + } + + if (ECL_GRDECL_FILE == file_type) { + exported_stream = util_fopen( exported_file , "r"); + kw_exported = ecl_kw_fscanf_alloc_grdecl_dynamic( exported_stream , field_config_get_key(field_config) , ECL_DOUBLE_TYPE ); + } else if (RMS_ROFF_FILE == file_type) { + ecl_grid_type * grid = field_config_get_grid(field_config); + exported_field_config = field_config_alloc_empty(field_config_get_key(field_config), grid, NULL, true); + exported_field = field_alloc(exported_field_config); + + bool keep_inactive = true; + field_fload_rms(exported_field, exported_file, keep_inactive); + } + } + + + { + int k, j, i = 0; + + for (k=0; k < nz; k++) { + for (j=0; j < ny; j++) { + for (i=0; i < nx; i++) { + bool active = field_config_active_cell(field_config, i, j, k); + double field_value = active ? field_ijk_get_double(field, i, j, k) : 0.0; + int global_index = field_config_global_index(field_config , i , j , k); + double exported_value = 0.0; + if (ECL_GRDECL_FILE == file_type) + exported_value = ecl_kw_iget_as_double(kw_exported, global_index); + else if (RMS_ROFF_FILE == file_type) { + exported_value = field_ijk_get_double(exported_field, i, j, k); + } + double initial_value = init_file ? ecl_kw_iget_as_double(kw_original, global_index) : 0.0; + + if (active) + test_assert_double_equal(field_value, exported_value); + else if (init_file) + test_assert_double_equal(initial_value, exported_value); + else if (file_type == RMS_ROFF_FILE) + test_assert_double_equal(RMS_INACTIVE_DOUBLE, exported_value); + else + test_assert_double_equal(0.0, exported_value); + } + } + } + } + + + if (init_file) { + util_fclose(original_stream); + ecl_kw_free(kw_original); + } + + if (ECL_GRDECL_FILE == file_type) { + util_fclose(exported_stream); + ecl_kw_free(kw_exported); + } else + field_free(exported_field); +} + + + +void forward_initialize_node(enkf_main_type * enkf_main, const char * init_file, enkf_node_type * field_node) { + { + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + bool_vector_type * iactive = bool_vector_alloc(0, false); + bool_vector_iset( iactive , ens_size - 1 , true ); + state_enum init_state = ANALYZED; + int start_report = 0; + int init_step_parameters = 0; + + enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + bool_vector_free(iactive); + } + + { + int iens = 0; + enkf_state_type * state = enkf_main_iget_state( enkf_main , iens ); + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + int error = 0; + + enkf_state_forward_init( state , fs , &error ); + } +} + + + +int main(int argc , char ** argv) { + enkf_main_install_SIGNALS(); + + const char * config_file = argv[1]; + const char * init_file = argv[2]; + const char * key = "PORO"; + int iens = 0; + + ert_test_context_type * test_context = ert_test_context_alloc("ExportInactiveCellsTest" , config_file , NULL); + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + const ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config(enkf_main); + const enkf_config_node_type * config_node = ensemble_config_get_node(ensemble_config , key); + const field_config_type * field_config = enkf_config_node_get_ref( config_node ); + enkf_state_type * state = enkf_main_iget_state( enkf_main , iens ); + enkf_node_type * field_node = enkf_state_get_node( state , key ); + field_type * field = enkf_node_value_ptr(field_node); + + { + forward_initialize_node(enkf_main, init_file, field_node); + node_id_type node_id = {.report_step = 0 , .iens = iens , .state = BOTH }; + test_assert_true(enkf_node_try_load(field_node , fs , node_id)); + field_scale(field, 3.0); + } + + int nx,ny,nz; + field_config_get_dims(field_config , &nx , &ny , &nz); + const char * export_file_grdecl = "my_test_dir/exported_field_test_file_grdecl"; + const char * export_file_roff = "my_test_dir/exported_field_test_file_roff"; + field_file_format_type file_type; + + char * found_init_file = enkf_main_alloc_abs_path_to_init_file(enkf_main, config_node); + { + file_type = ECL_GRDECL_FILE; + field_export(field, export_file_grdecl, NULL, file_type, false, found_init_file); + check_exported_data(export_file_grdecl, init_file, file_type, field_config, field, nx, ny, nz); + } + { + file_type = RMS_ROFF_FILE; + field_export(field, export_file_roff, NULL, file_type, false, found_init_file); + check_exported_data(export_file_roff, init_file, file_type, field_config, field, nx, ny, nz); + } + + free(found_init_file); + found_init_file = NULL; + { + file_type = ECL_GRDECL_FILE; + field_export(field, export_file_grdecl, NULL, file_type, false, found_init_file); + check_exported_data(export_file_grdecl, found_init_file, file_type, field_config, field, nx, ny, nz); + } + { + file_type = RMS_ROFF_FILE; + field_export(field, export_file_roff, NULL, file_type, false, found_init_file); + check_exported_data(export_file_roff, found_init_file, file_type, field_config, field, nx, ny, nz); + } + + + + ert_test_context_free(test_context); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c index d50ea1de46..ac833276dc 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c @@ -101,7 +101,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_free( iactive ); } @@ -132,7 +134,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_free( iactive ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c index 792efb00bd..57bbe9bf3b 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c @@ -96,12 +96,13 @@ int main(int argc , char ** argv) { { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ } - + test_assert_false( enkf_node_has_data( gen_kw_node , fs, node_id )); util_unlink_existing( "simulations/run0/MULTFLT_INIT" ); @@ -119,6 +120,7 @@ int main(int argc , char ** argv) { } enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); stringlist_free( msg_list ); + bool_vector_free( iactive ); test_assert_true(LOAD_FAILURE & error); } @@ -136,7 +138,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_free( iactive ); } @@ -154,6 +158,9 @@ int main(int argc , char ** argv) { test_assert_double_equal( 123456.0 , value); } } + + test_assert_true( util_is_file ("simulations/run0/parameters.txt")); //Export of gen kw params + util_clear_directory( "simulations" , true , true ); create_runpath( enkf_main ); test_assert_true( util_is_directory( "simulations/run0" )); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c index c0af154aa9..934fe7f460 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c @@ -95,11 +95,11 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ - - + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ test_assert_false( enkf_node_has_data( gen_param_node , fs, node_id )); util_unlink_existing( "simulations/run0/PARAM_INIT" ); + bool_vector_free( iactive ); } @@ -116,7 +116,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_free( iactive ); } test_assert_true( enkf_node_forward_init( gen_param_node , "simulations/run0" , 0 )); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c index 6cf036c150..8eca4f3565 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c @@ -103,7 +103,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_free( iactive ); } @@ -135,7 +137,9 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ + bool_vector_free( iactive ); } test_assert_true( enkf_node_forward_init( surface_node , "simulations/run0" , 0 )); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c new file mode 100644 index 0000000000..ec1b2e2083 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c @@ -0,0 +1,112 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_forward_init_transform.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include +#include +#include + + +void create_runpath(enkf_main_type * enkf_main ) { + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + bool_vector_type * iactive = bool_vector_alloc(0,false); + + state_enum init_state = ANALYZED; + int start_report = 0; + int init_step_parameters = 0; + bool_vector_iset( iactive , ens_size - 1 , true ); + enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + bool_vector_free(iactive); +} + + +bool check_original_exported_data_equal(const enkf_node_type * field_node) { + FILE * original_stream = util_fopen( "petro.grdecl" , "r"); + ecl_kw_type * kw_original = ecl_kw_fscanf_alloc_grdecl_dynamic( original_stream , "PORO" , ECL_DOUBLE_TYPE ); + + enkf_node_ecl_write(field_node, "tmp", NULL, 0); + FILE * exported_stream = util_fopen( "tmp/PORO.grdecl" , "r"); + ecl_kw_type * kw_exported = ecl_kw_fscanf_alloc_grdecl_dynamic( exported_stream , "PORO" , ECL_DOUBLE_TYPE ); + + bool ret = ecl_kw_numeric_equal(kw_original, kw_exported, 1e-5); + + util_fclose(original_stream); + util_fclose(exported_stream); + ecl_kw_free(kw_original); + ecl_kw_free(kw_exported); + + return ret; +} + + +int main(int argc , char ** argv) { + enkf_main_install_SIGNALS(); + const char * root_path = argv[1]; + const char * config_file = argv[2]; + const char * init_file = argv[3]; + const char * forward_init_string = argv[4]; + + test_work_area_type * work_area = test_work_area_alloc(config_file ); + test_work_area_copy_directory_content( work_area , root_path ); + test_work_area_install_file( work_area , init_file ); + test_work_area_set_store(work_area, true); + + bool strict = true; + enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); + enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + enkf_node_type * field_node = enkf_state_get_node( state , "PORO" ); + + bool forward_init; + test_assert_true( util_sscanf_bool( forward_init_string , &forward_init)); + test_assert_bool_equal( enkf_node_use_forward_init( field_node ) , forward_init ); + test_assert_bool_equal( forward_init, ensemble_config_have_forward_init( enkf_main_get_ensemble_config( enkf_main ))); + + util_clear_directory( "Storage" , true , true ); + + create_runpath( enkf_main ); + test_assert_true( util_is_directory( "simulations/run0" )); + + if (forward_init) + util_copy_file( init_file , "simulations/run0/petro.grdecl"); + + { + run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + int error = 0; + stringlist_type * msg_list = stringlist_alloc_new(); + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + stringlist_free( msg_list ); + bool_vector_free( iactive ); + test_assert_int_equal(error, 0); + } + + test_assert_true(check_original_exported_data_equal(field_node)); + + enkf_main_free(enkf_main); + test_work_area_free(work_area); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c index 4c608b40d9..89ab07ddf9 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c @@ -20,6 +20,8 @@ #include #include #include +#include +#include #include #include @@ -33,13 +35,18 @@ void test_mount() { test_work_area_type * work_area = test_work_area_alloc("enkf_fs/mount"); - + + test_assert_false( enkf_fs_exists( "mnt" )); enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); + test_assert_true( enkf_fs_exists( "mnt" )); { - enkf_fs_type * fs = enkf_fs_mount( "mnt" , false ); + enkf_fs_type * fs = enkf_fs_mount( "mnt" ); + test_assert_true( util_file_exists("mnt/mnt.lock")); test_assert_true( enkf_fs_is_instance( fs )); - enkf_fs_umount( fs ); + enkf_fs_decref( fs ); + test_assert_false( util_file_exists("mnt/mnt.lock")); } + test_work_area_free( work_area ); } @@ -49,46 +56,96 @@ void test_refcount() { enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); { - enkf_fs_type * fs = enkf_fs_mount( "mnt" , false ); + enkf_fs_type * fs = enkf_fs_mount( "mnt" ); test_assert_int_equal( 1 , enkf_fs_get_refcount( fs )); - { - enkf_fs_type * fs2 = enkf_fs_get_ref( fs ); - enkf_fs_type * fs3 = enkf_fs_get_weakref( fs ); - test_assert_int_equal( 2 , enkf_fs_get_refcount( fs )); - test_assert_int_equal( 2 , enkf_fs_get_refcount( fs2 )); - test_assert_int_equal( 2 , enkf_fs_get_refcount( fs3 )); - enkf_fs_umount( fs2 ); - } - test_assert_int_equal( 1 , enkf_fs_get_refcount( fs )); - enkf_fs_umount( fs ); + enkf_fs_decref( fs ); } test_work_area_free( work_area ); } -void test_read_only() { - test_work_area_type * work_area = test_work_area_alloc("enkf_fs/read_only"); - enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); - { - enkf_fs_type * fs_false = enkf_fs_mount( "mnt" , false ); +void createFS() { + pid_t pid = fork(); + + if (pid == 0) { + enkf_fs_type * fs_false = enkf_fs_mount( "mnt" ); test_assert_false(enkf_fs_is_read_only(fs_false)); + test_assert_true( util_file_exists("mnt/mnt.lock")); + { + int total_sleep = 0; + while (true) { + if (util_file_exists( "stop")) { + unlink("stop"); + break; + } + + usleep(1000); + total_sleep += 1000; + if (total_sleep > 1000000 * 5) { + fprintf(stderr,"Test failure - never receieved \"stop\" file from parent process \n"); + break; + } + } + } + enkf_fs_decref( fs_false ); + exit(0); + } + usleep(10000); +} + + +void test_fwrite_readonly( void * arg ) { + enkf_fs_type * fs = enkf_fs_safe_cast( arg ); + /* + The arguments here are completely bogus; the important thing is + that this fwrite call should be intercepted by a util_abort() + call (which is again intercepted by the testing function) before + the argument are actually accessed. + */ + enkf_fs_fwrite_node( fs , NULL , "KEY" , PARAMETER , 100 , 1 , FORECAST ); +} - enkf_fs_umount( fs_false ); - enkf_fs_type * fs_true = enkf_fs_mount( "mnt" , true ); - test_assert_true(enkf_fs_is_read_only(fs_true)); +/* + This test needs to fork off a seperate process to test the cross-process file locking. +*/ +void test_read_only2() { + test_work_area_type * work_area = test_work_area_alloc("enkf_fs/read_only2"); + enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); + createFS(); - enkf_fs_umount( fs_true ); + while (true) { + if (util_file_exists("mnt/mnt.lock")) + break; + } + + { + enkf_fs_type * fs_false = enkf_fs_mount( "mnt" ); + test_assert_true(enkf_fs_is_read_only(fs_false)); + test_assert_util_abort( "enkf_fs_fwrite_node" , test_fwrite_readonly , fs_false ); + enkf_fs_decref( fs_false ); } + { + FILE * stream = util_fopen("stop" , "w"); + fclose( stream ); + } + + while (util_file_exists( "stop")) { + usleep( 1000 ); + } test_work_area_free( work_area ); } + + + + int main(int argc, char ** argv) { test_mount(); test_refcount(); - test_read_only(); + test_read_only2(); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_fs_invalidate_cache.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs_invalidate_cache.c new file mode 100644 index 0000000000..24a956ff6b --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs_invalidate_cache.c @@ -0,0 +1,106 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include + +#include +#include +#include +#include + + +void create_and_initalize_case(enkf_main_type * enkf_main, const char * new_case, const char * param) { + + enkf_fs_type * initialized_case = enkf_main_mount_alt_fs(enkf_main, new_case, true ); + enkf_main_set_fs(enkf_main, initialized_case, NULL); + test_assert_string_equal(enkf_main_get_current_fs(enkf_main), enkf_fs_get_case_name(initialized_case)); + + int ens_size = enkf_main_get_ensemble_size(enkf_main); + stringlist_type * param_list = stringlist_alloc_new(); + stringlist_append_copy(param_list, param); + enkf_main_initialize_from_scratch(enkf_main, param_list, 0, ens_size-1, INIT_FORCE); + + enkf_fs_decref(initialized_case); +} + +double get_gen_kw_node_value(enkf_main_type * enkf_main, const char * param, int iens, int index) { + enkf_state_type * enkf_state = enkf_main_iget_state(enkf_main, iens); + enkf_node_type * gen_kw_node = enkf_state_get_node(enkf_state, param); + test_assert_not_NULL(gen_kw_node); + + node_id_type node_id = {.report_step = 0 , + .iens = iens, + .state = ANALYZED }; + + test_assert_true(enkf_node_try_load(gen_kw_node, enkf_main_get_fs(enkf_main), node_id)); + gen_kw_type * kw_case1 = enkf_node_value_ptr(gen_kw_node); + return gen_kw_data_iget( kw_case1 , index , false ); +} + + +void test_invalidate_cache(ert_test_context_type * test_context) { + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + test_assert_not_NULL(enkf_main); + + const char * case1 = "test_case1"; + const char * case2 = "test_case2"; + const char * param = "MULTFLT"; + + create_and_initalize_case(enkf_main, case1, param); + create_and_initalize_case(enkf_main, case2, param); + + int ensemble_size = enkf_main_get_ensemble_size(enkf_main); + int equal_count = 0; + + for (int iens = 0; iens < ensemble_size; ++iens) { + + double val1; + double val2; + + enkf_main_select_fs(enkf_main, case1); + test_assert_string_equal(enkf_main_get_current_fs(enkf_main), case1); + val1 = get_gen_kw_node_value(enkf_main, param, iens, 0); + + enkf_main_select_fs(enkf_main, case2); + test_assert_string_equal(enkf_main_get_current_fs(enkf_main), case2); + val2 = get_gen_kw_node_value(enkf_main, param, iens, 0); + + if (util_double_approx_equal(val1, val2)) + ++ equal_count; + + printf("Realization nr %d: MULTFLT value from test_case 1 is %f, MULTFLT value from test_case2 is %f\n", iens+1, val1, val2); + } + test_assert_true(equal_count < (ensemble_size-equal_count)); +} + + + +int main(int argc, char ** argv) { + const char * config_file = argv[1]; + test_assert_not_NULL(config_file); + ert_test_context_type * test_context = ert_test_context_alloc("test_context_enkf_fs_test" , config_file , NULL); + test_assert_not_NULL(test_context); + + test_invalidate_cache(test_context); + + ert_test_context_free(test_context); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c new file mode 100644 index 0000000000..5b7ea5a051 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c @@ -0,0 +1,317 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_gen_data_config.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include +#include + +#include +#include +#include + + +void test_report_steps_param() { + + gen_data_config_type * config = gen_data_config_alloc_GEN_PARAM("KEY" , ASCII , ASCII); + test_assert_false( gen_data_config_is_dynamic( config )); + test_assert_int_equal( 0 , gen_data_config_num_report_step( config )); + test_assert_false( gen_data_config_has_report_step( config , 0 )); + + /* Add to parameter should fail. */ + gen_data_config_add_report_step( config , 10 ); + test_assert_int_equal( 0 , gen_data_config_num_report_step( config )); + test_assert_false( gen_data_config_has_report_step( config , 10 )); + + /* Add to parameter should fail. */ + gen_data_config_set_active_report_steps_from_string( config , "0-9,100"); + test_assert_int_equal( 0 , gen_data_config_num_report_step( config )); + test_assert_false( gen_data_config_has_report_step( config , 10 )); + + + gen_data_config_free( config ); +} + + +void test_report_steps_dynamic() { + gen_data_config_type * config = gen_data_config_alloc_GEN_DATA_result("KEY" , ASCII); + test_assert_true( gen_data_config_is_dynamic( config )); + test_assert_int_equal( 0 , gen_data_config_num_report_step( config )); + test_assert_false( gen_data_config_has_report_step( config , 0 )); + + gen_data_config_add_report_step( config , 10 ); + test_assert_int_equal( 1 , gen_data_config_num_report_step( config )); + test_assert_true( gen_data_config_has_report_step( config , 10 )); + test_assert_int_equal( gen_data_config_iget_report_step( config , 0 ) , 10); + + gen_data_config_add_report_step( config , 10 ); + test_assert_int_equal( 1 , gen_data_config_num_report_step( config )); + test_assert_true( gen_data_config_has_report_step( config , 10 )); + + + gen_data_config_add_report_step( config , 5 ); + test_assert_int_equal( 2 , gen_data_config_num_report_step( config )); + test_assert_true( gen_data_config_has_report_step( config , 10 )); + test_assert_int_equal( gen_data_config_iget_report_step( config , 0 ) , 5); + test_assert_int_equal( gen_data_config_iget_report_step( config , 1 ) , 10); + + { + const int_vector_type * active_steps = gen_data_config_get_active_report_steps( config ); + + test_assert_int_equal( int_vector_iget( active_steps , 0 ) , 5); + test_assert_int_equal( int_vector_iget( active_steps , 1 ) , 10); + } + + gen_data_config_set_active_report_steps_from_string( config , "0-3,7-10,100"); // 0,1,2,3,7,8,9,10,100 + test_assert_int_equal( 9 , gen_data_config_num_report_step( config )); + test_assert_int_equal( 0 , gen_data_config_iget_report_step( config , 0 )); + test_assert_int_equal( 3 , gen_data_config_iget_report_step( config , 3)); + test_assert_int_equal( 9 , gen_data_config_iget_report_step( config , 6)); + test_assert_int_equal( 100 , gen_data_config_iget_report_step( config , 8)); + + gen_data_config_free( config ); +} + + + + + +void test_result_format() { + test_assert_true( gen_data_config_valid_result_format("path/file%d/extra")); + test_assert_true( gen_data_config_valid_result_format("file%04d")); + test_assert_false( gen_data_config_valid_result_format("/path/file%04d")); + + test_assert_false( gen_data_config_valid_result_format("/path/file%s")); + test_assert_false( gen_data_config_valid_result_format("/path/file")); + test_assert_false( gen_data_config_valid_result_format("/path/file%f")); + + test_assert_false( gen_data_config_valid_result_format(NULL)); +} + + +void alloc_invalid_io_format1( void * arg) { + gen_data_config_type * config = gen_data_config_alloc_GEN_DATA_result("KEY" , ASCII_TEMPLATE ); + gen_data_config_free( config ); +} + + +void alloc_invalid_io_format2( void * arg) { + gen_data_config_type * config = gen_data_config_alloc_GEN_DATA_state("KEY" , GEN_DATA_UNDEFINED , ASCII); + gen_data_config_free( config ); +} + + +void alloc_invalid_io_format3( void *arg) { + gen_data_config_type * config = gen_data_config_alloc_GEN_PARAM("KEY" , ASCII , ASCII_TEMPLATE ); + gen_data_config_free( config ); +} + + + +void test_set_invalid_format() { + test_assert_util_abort( "gen_data_config_alloc_GEN_DATA_result" , alloc_invalid_io_format1 , NULL); + test_assert_util_abort( "gen_data_config_alloc_GEN_DATA_state" , alloc_invalid_io_format2 , NULL); + test_assert_util_abort( "gen_data_config_alloc_GEN_PARAM" , alloc_invalid_io_format3 , NULL); +} + + +void test_format_check() { + test_assert_int_equal( GEN_DATA_UNDEFINED , gen_data_config_check_format( NULL )); + test_assert_int_equal( GEN_DATA_UNDEFINED , gen_data_config_check_format("Error?")); + test_assert_int_equal( ASCII , gen_data_config_check_format("ASCII")); + test_assert_int_equal( ASCII_TEMPLATE , gen_data_config_check_format("ASCII_TEMPLATE")); + test_assert_int_equal( BINARY_DOUBLE , gen_data_config_check_format("BINARY_DOUBLE")); + test_assert_int_equal( BINARY_FLOAT , gen_data_config_check_format("BINARY_FLOAT")); +} + + +void test_set_template_invalid() { + test_work_area_type * work_area = test_work_area_alloc("GEN_DATA_SET_TEMPLATE_INVALID"); + gen_data_config_type * config = gen_data_config_alloc_GEN_PARAM("KEY" , ASCII , ASCII); + + test_assert_false( gen_data_config_set_template( config , "does/not/exist" , NULL ) ); + + { + FILE * stream = util_fopen("template.txt" , "w"); + fprintf(stream , "Header1\n\nHeader2\n"); + fclose( stream ); + + gen_data_config_set_template( config , "template.txt" , ""); + test_assert_string_equal( "template.txt" , gen_data_config_get_template_file( config )); + test_assert_string_equal( "" , gen_data_config_get_template_key( config )); + + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_string_equal( buffer , "Header1\n\nHeader2\n"); + test_assert_int_equal( data_offset , 8 ); + test_assert_int_equal( buffer_size , 22 ); + test_assert_int_equal( data_skip , 5 ); + } + } + + + { + FILE * stream = util_fopen("template2.txt" , "w"); + fprintf(stream , "Template XYZ - lots of shit .... \n"); + fclose( stream ); + + test_assert_false( gen_data_config_set_template( config , "template2.txt" , "")); + + test_assert_string_equal( "template.txt" , gen_data_config_get_template_file( config )); + test_assert_string_equal( "" , gen_data_config_get_template_key( config )); + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_string_equal( buffer , "Header1\n\nHeader2\n"); + test_assert_int_equal( data_offset , 8 ); + test_assert_int_equal( buffer_size , 22 ); + test_assert_int_equal( data_skip , 5 ); + } + } + + gen_data_config_free( config ); + test_work_area_free( work_area ); +} + + + +void test_set_template() { + test_work_area_type * work_area = test_work_area_alloc("GEN_DATA_SET_TEMPLATE"); + { + gen_data_config_type * config = gen_data_config_alloc_GEN_PARAM("KEY" , ASCII , ASCII); + + test_assert_true( gen_data_config_set_template( config , NULL , NULL ) ); + test_assert_NULL( gen_data_config_get_template_file( config )); + test_assert_NULL( gen_data_config_get_template_key( config )); + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_NULL( buffer ); + test_assert_int_equal( data_offset , 0 ); + test_assert_int_equal( buffer_size , 0 ); + test_assert_int_equal( data_skip , 0 ); + } + + + { + FILE * stream = util_fopen("template.txt" , "w"); + fprintf(stream , "Header\n"); + fclose( stream ); + + test_assert_true( gen_data_config_set_template( config , "template.txt" , NULL )); + test_assert_string_equal( "template.txt" , gen_data_config_get_template_file( config )); + test_assert_NULL( gen_data_config_get_template_key( config )); + + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_string_equal( buffer , "Header\n"); + test_assert_int_equal( data_offset , 7 ); + test_assert_int_equal( buffer_size , 7 ); + test_assert_int_equal( data_skip , 0 ); + } + } + + { + FILE * stream = util_fopen("template.txt" , "w"); + fprintf(stream , "Header1\n\nHeader2\n"); + fclose( stream ); + + gen_data_config_set_template( config , "template.txt" , ""); + test_assert_string_equal( "template.txt" , gen_data_config_get_template_file( config )); + test_assert_string_equal( "" , gen_data_config_get_template_key( config )); + + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_string_equal( buffer , "Header1\n\nHeader2\n"); + test_assert_int_equal( data_offset , 8 ); + test_assert_int_equal( buffer_size , 22 ); + test_assert_int_equal( data_skip , 5 ); + } + } + + + gen_data_config_set_template( config , NULL , NULL ); + test_assert_NULL( gen_data_config_get_template_file( config )); + test_assert_NULL( gen_data_config_get_template_key( config )); + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_NULL( buffer ); + test_assert_int_equal( data_offset , 0 ); + test_assert_int_equal( buffer_size , 0 ); + test_assert_int_equal( data_skip , 0 ); + } + + + test_assert_true( gen_data_config_set_template( config , NULL , "KEY")); + test_assert_NULL( gen_data_config_get_template_file( config )); + test_assert_NULL( gen_data_config_get_template_key( config )); + + { + char * buffer; + int data_offset , buffer_size , data_skip; + gen_data_config_get_template_data( config , &buffer , &data_offset , &buffer_size , &data_skip); + + test_assert_NULL( buffer ); + test_assert_int_equal( data_offset , 0 ); + test_assert_int_equal( buffer_size , 0 ); + test_assert_int_equal( data_skip , 0 ); + } + + + gen_data_config_free( config ); + } + test_work_area_free( work_area ); +} + + +int main(int argc , char ** argv) { + + test_report_steps_param(); + test_report_steps_dynamic(); + test_result_format(); + test_set_template(); + test_set_template_invalid(); + test_set_invalid_format(); + test_format_check(); + + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config_parse.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config_parse.c new file mode 100644 index 0000000000..93af0fd773 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config_parse.c @@ -0,0 +1,242 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_gen_data_config_parse.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include +#include + +#include +#include + +#include + +#include +#include +#include + + +enkf_config_node_type * parse_alloc_GEN_PARAM( const char * config_string , bool parse_valid) { + config_type * config = config_alloc(); + enkf_config_node_type * enkf_config_node = NULL; + + enkf_config_node_add_GEN_PARAM_config_schema( config ); + { + FILE * stream = util_fopen("config.txt" , "w"); + fprintf(stream , config_string); + fclose( stream ); + } + + test_assert_bool_equal( parse_valid , config_parse( config , "config.txt" , "--" , NULL , NULL , CONFIG_UNRECOGNIZED_IGNORE , true)); + if (parse_valid) { + const config_content_item_type * config_item = config_get_content_item( config , GEN_PARAM_KEY ); + const config_content_node_type * config_node = config_content_item_iget_node( config_item , 0 ); + + enkf_config_node = enkf_config_node_alloc_GEN_PARAM_from_config( config_node ); + } + config_free( config ); + return enkf_config_node; +} + + + + + +void test_parse_gen_param() { + test_work_area_type * work_area = test_work_area_alloc("GEN_PARAM_parse"); + + // Parse error: missing eclfile + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY\n" , false); + test_assert_NULL( config_node ); + } + + // Missing all required KEY: arguments + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY ECLFILE\n" , true); + test_assert_NULL( config_node ); + } + + + // OUTPUT_FORMAT: Is incorrectly spelled + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY ECLFILE INIT_FILES:XXX INPUT_FORMAT:ASCII OutPutFOrmat:ASCII\n" , true); + test_assert_NULL( config_node ); + } + + + // OUTPUT_FORMAT: ASCII is incorrectly spelled + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY ECLFILE INIT_FILES:XXX INPUT_FORMAT:ASCII OUTPUT_FORMAT:ASCI\n" , true); + test_assert_NULL( config_node ); + } + + // Invalid value for INPUT_FORMAT + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY ECLFILE INIT_FILES:XXX INPUT_FORMAT:ASCII_TEMPLATE OUTPUT_FORMAT:ASCII\n" , true); + test_assert_NULL( config_node ); + } + + + // Correct + { + enkf_config_node_type * config_node = parse_alloc_GEN_PARAM( "GEN_PARAM KEY ECLFILE INPUT_FORMAT:BINARY_DOUBLE OUTPUT_FORMAT:ASCII INIT_FILES:INIT%%d\n" , true); + + test_assert_string_equal( "ECLFILE" , enkf_config_node_get_enkf_outfile( config_node )); + test_assert_NULL( enkf_config_node_get_enkf_infile( config_node )); + test_assert_string_equal( "INIT%d" , enkf_config_node_get_init_file_fmt( config_node )); + test_assert_int_equal( PARAMETER , enkf_config_node_get_var_type( config_node )); + { + gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); + test_assert_int_equal( BINARY_DOUBLE , gen_data_config_get_input_format( gen_data_config )); + test_assert_int_equal( ASCII , gen_data_config_get_output_format( gen_data_config )); + } + + enkf_config_node_free( config_node ); + } + + test_work_area_free( work_area ); +} + + + +enkf_config_node_type * parse_alloc_GEN_DATA_result( const char * config_string , bool parse_valid) { + config_type * config = config_alloc(); + enkf_config_node_type * enkf_config_node = NULL; + + enkf_config_node_add_GEN_DATA_config_schema( config ); + { + FILE * stream = util_fopen("config.txt" , "w"); + fprintf(stream , config_string); + fclose( stream ); + } + test_assert_bool_equal( parse_valid , config_parse( config , "config.txt" , "--" , NULL , NULL , CONFIG_UNRECOGNIZED_IGNORE , true)); + if (parse_valid) { + const config_content_item_type * config_item = config_get_content_item( config , GEN_DATA_KEY ); + const config_content_node_type * config_node = config_content_item_iget_node( config_item , 0 ); + + enkf_config_node = enkf_config_node_alloc_GEN_DATA_from_config( config_node ); + } + config_free( config ); + return enkf_config_node; +} + + + +void test_parse_gen_data_result() { + test_work_area_type * work_area = test_work_area_alloc("GEN_DATA_RESULT_parse"); + // Parse error: missing KEY + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA\n" , false); + test_assert_NULL( config_node ); + } + + // Validation error: missing INPUT_FORMAT: + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results%%d REPORT_STEPS:10 \n" , true); + test_assert_NULL( config_node ); + } + + + // Validation error: Invalid INPUT_FORMAT: + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results%%d INPUT_FORMAT:AsCiiiiii REPORT_STEPS:10 \n" , true); + test_assert_NULL( config_node ); + } + + + // Validation error: missing RESULT_FILE: + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY INPUT_FORMAT:ASCII REPORT_STEPS:10 \n" , true); + test_assert_NULL( config_node ); + } + + + // Validation error: Invalid RESULT_FILE: + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results INPUT_FORMAT:ASCII REPORT_STEPS:10 \n" , true); + test_assert_NULL( config_node ); + } + + // Validation error: Missing REPORT_STEPS: + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results%%d INPUT_FORMAT:ASCII \n" , true); + test_assert_NULL( config_node ); + } + + // Validation error: Invalid REPORT_STEPS + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results%%d INPUT_FORMAT:ASCII REPORT_STEPS:XXX\n" , true); + test_assert_NULL( config_node ); + } + + // Valid + { + enkf_config_node_type * config_node = parse_alloc_GEN_DATA_result( "GEN_DATA GEN_DATA_KEY RESULT_FILE:Results%%d INPUT_FORMAT:ASCII REPORT_STEPS:10,20,30\n" , true); + test_assert_true( enkf_config_node_is_instance( config_node )); + + test_assert_string_equal( "Results%d" , enkf_config_node_get_enkf_infile( config_node )); + test_assert_NULL( enkf_config_node_get_init_file_fmt( config_node )); + test_assert_NULL( enkf_config_node_get_enkf_outfile( config_node )); + test_assert_int_equal( DYNAMIC_RESULT , enkf_config_node_get_var_type( config_node )); + { + gen_data_config_type * gen_data_config = enkf_config_node_get_ref( config_node ); + test_assert_int_equal( ASCII , gen_data_config_get_input_format( gen_data_config )); + test_assert_int_equal( GEN_DATA_UNDEFINED , gen_data_config_get_output_format( gen_data_config )); + + test_assert_int_equal( 3 , gen_data_config_num_report_step( gen_data_config )); + test_assert_int_equal( 10 , gen_data_config_iget_report_step( gen_data_config , 0 )); + test_assert_int_equal( 30 , gen_data_config_iget_report_step( gen_data_config , 2 )); + + + test_assert_true( gen_data_config_has_report_step( gen_data_config , 10 )); + test_assert_true( gen_data_config_has_report_step( gen_data_config , 20 )); + test_assert_true( gen_data_config_has_report_step( gen_data_config , 30 )); + + test_assert_false( gen_data_config_has_report_step( gen_data_config , 05 )); + test_assert_false( gen_data_config_has_report_step( gen_data_config , 15 )); + test_assert_false( gen_data_config_has_report_step( gen_data_config , 25 )); + test_assert_false( gen_data_config_has_report_step( gen_data_config , 35 )); + + } + test_assert_true( enkf_config_node_internalize( config_node , 10 )); + test_assert_true( enkf_config_node_internalize( config_node , 20 )); + test_assert_true( enkf_config_node_internalize( config_node , 30 )); + + test_assert_false( enkf_config_node_internalize( config_node , 05 )); + test_assert_false( enkf_config_node_internalize( config_node , 15 )); + test_assert_false( enkf_config_node_internalize( config_node , 25 )); + test_assert_false( enkf_config_node_internalize( config_node , 35 )); + + enkf_config_node_free( config_node ); + } + + test_work_area_free( work_area ); +} + + + + +int main(int argc , char ** argv) { + test_parse_gen_param(); + test_parse_gen_data_result(); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_obs_load.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_obs_load.c new file mode 100644 index 0000000000..b540dab1c3 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_obs_load.c @@ -0,0 +1,58 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_gen_obs_load.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include +#include +#include + +#include +#include + +#include +#include + + + +void test_obs_check_report_steps(const char * config_file ) { + ert_test_context_type * test_context = ert_test_context_alloc( "GEN_OBS" , config_file , NULL ); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + enkf_obs_type * obs = enkf_main_get_obs( enkf_main ); + + test_assert_true( enkf_obs_has_key( obs , "GEN_OBS10")); + test_assert_true( enkf_obs_has_key( obs , "GEN_OBS20")); + test_assert_false( enkf_obs_has_key( obs , "GEN_OBS30")); + + ert_test_context_free( test_context ); +} + + + + + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + + test_obs_check_report_steps( config_file ); + +} + + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_iter_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_iter_config.c index 758d9da497..751e5efb85 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_iter_config.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_iter_config.c @@ -37,13 +37,35 @@ char * create_config_file( const char * enspath_fmt , const char * runpath_fmt , char * config_file = util_alloc_tmp_file(TMP_PATH , "iter-config" , false); FILE * stream = util_fopen( config_file , "w"); fprintf(stream , "%s %s\n" , ITER_CASE_KEY , enspath_fmt); - fprintf(stream , "%s %s\n" , ITER_RUNPATH_KEY , runpath_fmt); fprintf(stream , "%s %d\n" , ITER_COUNT_KEY , iter_count); fclose( stream ); return config_file; } + +void test_set() { + analysis_iter_config_type * iter_config = analysis_iter_config_alloc(); + + test_assert_false( analysis_iter_config_case_fmt_set( iter_config )); + analysis_iter_config_set_case_fmt( iter_config , "case%d"); + test_assert_true( analysis_iter_config_case_fmt_set( iter_config )); + + test_assert_false( analysis_iter_config_num_iterations_set( iter_config )); + analysis_iter_config_set_num_iterations( iter_config , 77 ); + test_assert_true( analysis_iter_config_num_iterations_set( iter_config )); + + test_assert_int_equal( analysis_iter_config_get_num_retries_per_iteration(iter_config), 4); + analysis_iter_config_set_num_retries_per_iteration(iter_config , 10 ); + test_assert_int_equal( analysis_iter_config_get_num_retries_per_iteration(iter_config), 10); + + + analysis_iter_config_free( iter_config ); +} + + + + int main(int argc , char ** argv) { const char * enspath_fmt = "iter%d"; const char * runpath_fmt = "run/iter%d/real%d"; @@ -57,7 +79,6 @@ int main(int argc , char ** argv) { test_assert_true( config_parse( config , config_file , NULL , NULL , NULL , CONFIG_UNRECOGNIZED_ERROR , true)); test_assert_true( config_item_set( config , ITER_CASE_KEY )); - test_assert_true( config_item_set( config , ITER_RUNPATH_KEY )); test_assert_true( config_item_set( config , ITER_COUNT_KEY )); { @@ -65,18 +86,17 @@ int main(int argc , char ** argv) { char itercase[50]; sprintf(itercase,DEFAULT_ANALYSIS_ITER_CASE,5); test_assert_string_equal( analysis_iter_config_iget_case( iter_config , 5) , itercase ); - test_assert_string_equal( analysis_iter_config_iget_runpath_fmt( iter_config , 5) , DEFAULT_ANALYSIS_ITER_RUNPATH ); - analysis_iter_config_init( iter_config , config ); test_assert_int_equal( analysis_iter_config_get_num_iterations( iter_config ) , iter_count ); test_assert_string_equal( analysis_iter_config_iget_case( iter_config , 5) , "iter5"); - test_assert_string_equal( analysis_iter_config_iget_runpath_fmt( iter_config , 5) , "run/iter5/real%d" ); - + analysis_iter_config_free( iter_config ); } remove( config_file ); free( config_file ); config_free( config ); + + test_set(); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_magic_string_in_workflows.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_magic_string_in_workflows.c new file mode 100644 index 0000000000..1bfae21eab --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_magic_string_in_workflows.c @@ -0,0 +1,78 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_magic_string_in_workflows.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include + +#include +#include + +#include +#include + + +void test_magic_strings( ert_test_context_type * test_context ) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + test_assert_true( ert_test_context_run_worklow( test_context , "MAGIC_PRINT") ); + test_assert_true( util_file_exists( "magic-list.txt") ); + + { + FILE * stream = util_fopen("magic-list.txt" , "r"); + char string[128]; + + fscanf( stream , "%s" , string); + test_assert_string_equal( string , enkf_fs_get_case_name( enkf_main_get_fs( enkf_main ))); + + fscanf( stream , "%s" , string); + test_assert_string_equal( string , "MagicAllTheWayToWorkFlow"); + + fclose( stream ); + } +} + + +void test_has_job(ert_test_context_type * test_context ) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + ert_workflow_list_type * workflows = enkf_main_get_workflow_list( enkf_main ); + test_assert_true( ert_workflow_list_has_job( workflows , "MAGIC_PRINT" )); +} + + +int main( int argc , char ** argv) { + const char * model_config = argv[1]; + const char * site_config = NULL; + ert_test_context_type * test_context = ert_test_context_alloc( "MAGIC-STRINGS" , model_config , site_config); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + + { + test_has_job( test_context ); + + enkf_main_select_fs(enkf_main , "default"); + test_assert_string_equal( "default" , enkf_fs_get_case_name( enkf_main_get_fs( enkf_main ))); + test_magic_strings( test_context ); + + enkf_main_select_fs(enkf_main , "extraCase"); + test_assert_string_equal( "extraCase" , enkf_fs_get_case_name( enkf_main_get_fs( enkf_main ))); + test_magic_strings( test_context ); + } + ert_test_context_free( test_context ); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs.c index b3180e07d7..05fb217c4f 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs.c @@ -42,13 +42,20 @@ int main(int argc, char ** argv) { { const char * site_config = "/project/res/etc/ERT/site-config"; enkf_main_type * enkf_main = enkf_main_bootstrap( site_config , model_config , false , false ); - + enkf_main_select_fs( enkf_main , "enkf"); test_assert_true( enkf_main_case_is_current( enkf_main , "enkf")); test_assert_false( enkf_main_case_is_current( enkf_main , "default_fs")); test_assert_false( enkf_main_case_is_current( enkf_main , "does_not_exist")); test_assert_int_equal( 1 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); + { + enkf_fs_type * fs_ref = enkf_main_get_fs_ref( enkf_main ); + test_assert_int_equal( 2 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); + enkf_fs_decref( fs_ref ); + test_assert_int_equal( 1 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); + } + { state_map_type * map1 = enkf_fs_get_state_map( enkf_main_get_fs( enkf_main )); state_map_type * map2 = enkf_main_alloc_readonly_state_map(enkf_main , "enkf"); @@ -56,52 +63,55 @@ int main(int argc, char ** argv) { state_map_free( map2 ); } { - enkf_fs_type * fs1 = enkf_main_mount_alt_fs( enkf_main , "default" , false , false); - enkf_fs_type * fs2 = enkf_main_mount_alt_fs( enkf_main , "enkf" , false , false); + enkf_fs_type * fs1 = enkf_main_mount_alt_fs( enkf_main , "default" , false ); + enkf_fs_type * fs2 = enkf_main_mount_alt_fs( enkf_main , "enkf" , false ); + test_assert_int_equal( 2 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); test_assert_int_equal( 2 , enkf_fs_get_refcount( fs2 )); test_assert_int_equal( 1 , enkf_fs_get_refcount( fs1 )); - enkf_fs_umount( fs1 ); - enkf_fs_umount( fs2 ); + enkf_fs_decref( fs1 ); + enkf_fs_decref( fs2 ); } { - enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , false , false ); + enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , false ); enkf_main_select_fs( enkf_main , "default"); test_assert_int_equal( 1 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); - enkf_fs_umount( enkf_fs ); + enkf_fs_decref( enkf_fs ); } { - enkf_fs_type * default_fs = enkf_main_mount_alt_fs( enkf_main , "default" , false , false ); - + enkf_fs_type * default_fs = enkf_main_mount_alt_fs( enkf_main , "default" , false ); + test_assert_int_equal( 2 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); enkf_main_select_fs( enkf_main , "default"); test_assert_int_equal( 2 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); - enkf_fs_umount( default_fs ); + enkf_fs_decref( default_fs ); test_assert_int_equal( 1 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); } /*****************************************************************/ { - enkf_fs_type * fs = enkf_main_mount_alt_fs( enkf_main , "default" , false , false ); + enkf_fs_type * fs = enkf_main_mount_alt_fs( enkf_main , "default" , false ); test_assert_int_equal( 2 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); enkf_main_set_fs( enkf_main , fs , NULL ); + enkf_fs_decref( fs ); test_assert_int_equal( 1 , enkf_fs_get_refcount( enkf_main_get_fs( enkf_main ))); } { - enkf_fs_type * fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , false , false ); - enkf_fs_type * current = enkf_main_mount_alt_fs( enkf_main , "default" , false , false); + enkf_fs_type * fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , false ); + enkf_fs_type * current = enkf_main_mount_alt_fs( enkf_main , "default" , false ); - test_assert_int_equal( 2 , enkf_fs_get_refcount( current )); test_assert_int_equal( 1 , enkf_fs_get_refcount( fs)); enkf_main_set_fs( enkf_main , fs , NULL); - test_assert_int_equal( 1 , enkf_fs_get_refcount( fs)); + test_assert_int_equal( 2 , enkf_fs_get_refcount( fs)); test_assert_int_equal( 1 , enkf_fs_get_refcount( current )); - enkf_fs_umount( current ); + + enkf_fs_decref( current ); + enkf_fs_decref( fs); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs_current_file_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs_current_file_test.c index 3914f20762..8e2ccf8638 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs_current_file_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_main_fs_current_file_test.c @@ -71,11 +71,10 @@ void test_change_case(const char * site_config, const char * model_config) { free(current_case); } - enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "default" , false , false ); + enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "default" , false ); enkf_main_select_fs( enkf_main , "default"); test_assert_true( enkf_main_case_is_current( enkf_main , "default")); - enkf_fs_umount( enkf_fs ); - + enkf_fs_decref( enkf_fs ); enkf_main_free(enkf_main); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_model_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_model_config.c index cbf8eaa035..5354e83a6c 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_model_config.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_model_config.c @@ -47,6 +47,10 @@ void test_runpath() { test_assert_true( model_config_select_runpath(model_config , "KEY")); test_assert_string_equal("PATH%d" , model_config_get_runpath_as_char(model_config)); + test_assert_false( model_config_runpath_requires_iter( model_config )); + model_config_set_runpath( model_config , "iens%d/iter%d" ); + test_assert_true( model_config_runpath_requires_iter( model_config )); + model_config_free( model_config ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_fs.c new file mode 100644 index 0000000000..a7bf72316e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_fs.c @@ -0,0 +1,127 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_obs_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include + +#include +#include +#include +#include +#include +#include + + +void testS( ert_test_context_type * test_context ) { + { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + int_vector_type * step_list = int_vector_alloc(0,0); + int_vector_type * active_list = int_vector_alloc(0,0); + obs_data_type * obs_data = obs_data_alloc( ); + local_obsset_type * obs_set = local_obsset_alloc( "OBSNAME" ); + meas_data_type * meas_data; + int active_size = 0; + + + { + for (int i= 0; i < enkf_main_get_ensemble_size( enkf_main); i++) + int_vector_append( active_list , i ); + active_size = int_vector_size( active_list ); + } + { + for (int s = 0; s < enkf_main_get_history_length( enkf_main ); s++) + int_vector_append( step_list , s ); + } + + meas_data = meas_data_alloc( active_list ); + obs_data = obs_data_alloc( ); + + enkf_obs_get_obs_and_measure( enkf_obs , fs , step_list , FORECAST , active_list , meas_data , obs_data , obs_set); + { + FILE * stream = util_fopen("analysis/Smatrix" , "r"); + matrix_type * S = meas_data_allocS( meas_data , active_size ); + matrix_type * S0 = matrix_fread_alloc( stream ); + + test_assert_true( matrix_equal( S0 , S )); + + matrix_free( S ); + matrix_free( S0 ); + fclose( stream ); + } + int_vector_free( step_list ); + int_vector_free( active_list ); + meas_data_free( meas_data ); + obs_data_free( obs_data ); + local_obsset_free( obs_set ); + } +} + + + +void test_iget(ert_test_context_type * test_context) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + + test_assert_int_equal( 29 , enkf_obs_get_size( enkf_obs ) ); + for (int iobs = 0; iobs < enkf_obs_get_size( enkf_obs ); iobs++) { + obs_vector_type * vec1 = enkf_obs_iget_vector( enkf_obs , iobs ); + obs_vector_type * vec2 = enkf_obs_get_vector( enkf_obs , obs_vector_get_key( vec1 )); + + test_assert_ptr_equal( vec1 , vec2 ); + } +} + + +void test_container( ert_test_context_type * test_context ) { + enkf_config_node_type * config_node = enkf_config_node_new_container( "CONTAINER" ); + enkf_config_node_type * wwct1_node = enkf_config_node_alloc_summary( "WWCT:OP_1" , LOAD_FAIL_SILENT); + enkf_config_node_type * wwct2_node = enkf_config_node_alloc_summary( "WWCT:OP_2" , LOAD_FAIL_SILENT); + enkf_config_node_type * wwct3_node = enkf_config_node_alloc_summary( "WWCT:OP_3" , LOAD_FAIL_SILENT); + + + enkf_config_node_update_container( config_node , wwct1_node ); + enkf_config_node_update_container( config_node , wwct2_node ); + enkf_config_node_update_container( config_node , wwct3_node ); + { + enkf_node_type * container = enkf_node_deep_alloc( config_node ); + enkf_node_free( container ); + } + + + enkf_config_node_free( wwct3_node ); + enkf_config_node_free( wwct2_node ); + enkf_config_node_free( wwct1_node ); + enkf_config_node_free( config_node ); +} + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + const char * site_config = NULL; + ert_test_context_type * test_context = ert_test_context_alloc( "ENKF_OBS_FS" , config_file , site_config ); + { + testS( test_context ); + test_iget( test_context ); + test_container( test_context ); + } + ert_test_context_free( test_context ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_vector_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_vector_fs.c new file mode 100644 index 0000000000..22a4f8425e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_obs_vector_fs.c @@ -0,0 +1,104 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_obs_vector_fs.c' is part of ERT - Ensemble based + Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include + +#include +#include +#include +#include +#include +#include + +#include + + +void test_valid_obs_vector( enkf_main_type * enkf_main , const char * obs_key) { + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key ); + bool_vector_type * active_mask = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + + test_assert_true( obs_vector_has_data( obs_vector , active_mask , fs )); + bool_vector_free( active_mask ); +} + + +void test_invalid_obs_vector( enkf_main_type * enkf_main , const char * obs_key) { + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key ); + bool_vector_type * active_mask = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); + + test_assert_false( obs_vector_has_data( obs_vector , active_mask , fs )); + bool_vector_free( active_mask ); +} + +void test_container( ert_test_context_type * test_context ) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + obs_vector_type * rft_obs = enkf_obs_get_vector( enkf_obs , "RFT_TEST"); + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + bool_vector_type * active_mask = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true ); + + test_assert_true( obs_vector_has_data( rft_obs , active_mask , fs )); + bool_vector_free( active_mask ); +} + + + +void test_measure( ert_test_context_type * test_context ) { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + obs_vector_type * rft_obs = enkf_obs_get_vector( enkf_obs , "RFT_TEST"); + int_vector_type * ens_active_list = int_vector_alloc(0,0); + active_list_type * active_list = active_list_alloc( ); + meas_data_type * meas_data_RFT; + + for (int i=0; i < enkf_main_get_ensemble_size( enkf_main ); i++) + int_vector_append( ens_active_list , i ); + meas_data_RFT = meas_data_alloc( ens_active_list ); + + obs_vector_measure( rft_obs , fs , FORECAST , 20 , ens_active_list , meas_data_RFT , active_list ); + + int_vector_free( ens_active_list ); + active_list_free( active_list ); + meas_data_free( meas_data_RFT ); +} + + + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + ert_test_context_type * context = ert_test_context_alloc( "OBS_VECTOR_FS" , config_file , NULL); + enkf_main_type * enkf_main = ert_test_context_get_main( context ); + + { + test_valid_obs_vector( enkf_main , "WWCT:OP_3"); + test_invalid_obs_vector( enkf_main , "GOPT:OP"); + test_container( context ); + test_measure( context ); + } + ert_test_context_free( context ); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_pca_plot.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_pca_plot.c index 86504f3931..71790def4a 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_pca_plot.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_pca_plot.c @@ -29,8 +29,11 @@ pca_plot_data_type * create_data() { matrix_type * PC = matrix_alloc( 3 , 10); matrix_type * PC_obs = matrix_alloc( 3 , 1 ); - pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs); - + double_vector_type * singular_values = double_vector_alloc(3 , 1); + + pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs , singular_values); + + double_vector_free( singular_values ); matrix_free( PC ); matrix_free( PC_obs ); return data; @@ -41,8 +44,9 @@ pca_plot_data_type * create_data() { void test_create_data() { matrix_type * PC = matrix_alloc( 3 , 10); matrix_type * PC_obs = matrix_alloc( 3 , 1 ); + double_vector_type * singular_values = double_vector_alloc(3 , 1); { - pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs); + pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs , singular_values); test_assert_true( pca_plot_data_is_instance( data )); test_assert_int_equal( 3 , pca_plot_data_get_size( data )); test_assert_int_equal( 10 , pca_plot_data_get_ens_size( data )); @@ -50,11 +54,12 @@ void test_create_data() { pca_plot_data_free( data ); } matrix_resize( PC , 4 , 10 , false); - test_assert_NULL( pca_plot_data_alloc( "KEY" , PC , PC_obs )); + test_assert_NULL( pca_plot_data_alloc( "KEY" , PC , PC_obs , singular_values)); matrix_resize( PC_obs , 3 , 2 , false); - test_assert_NULL( pca_plot_data_alloc( "KEY" , PC , PC_obs )); + test_assert_NULL( pca_plot_data_alloc( "KEY" , PC , PC_obs , singular_values)); + double_vector_free( singular_values ); matrix_free( PC ); matrix_free( PC_obs ); } @@ -64,11 +69,15 @@ void test_create_data() { void test_create_vector() { matrix_type * PC = matrix_alloc( 3 , 10); matrix_type * PC_obs = matrix_alloc( 3 , 1 ); + double_vector_type * singular_values = double_vector_alloc(3 , 1); + { - pca_plot_vector_type * vector = pca_plot_vector_alloc(0 , PC , PC_obs); + pca_plot_vector_type * vector = pca_plot_vector_alloc(0 , PC , PC_obs, singular_values); test_assert_true( pca_plot_vector_is_instance( vector )); pca_plot_vector_free( vector ); } + + double_vector_free( singular_values ); matrix_free( PC ); matrix_free( PC_obs ); } @@ -85,16 +94,20 @@ void test_content() { rng_type * rng = rng_alloc(MZRAN , INIT_DEFAULT); matrix_type * PC = matrix_alloc( 3 , 10); matrix_type * PC_obs = matrix_alloc( 3 , 1 ); + double_vector_type * singular_values = double_vector_alloc(3 , 1); matrix_random_init( PC , rng ); matrix_random_init( PC_obs , rng ); { - pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs); + pca_plot_data_type * data = pca_plot_data_alloc("KEY" , PC , PC_obs, singular_values); for (int i=0; i < matrix_get_rows( PC ); i++) { const pca_plot_vector_type * vector = pca_plot_data_iget_vector( data , i ); test_assert_double_equal( matrix_iget( PC_obs , i , 0) , pca_plot_vector_get_obs_value( vector ) ); + test_assert_double_equal( double_vector_iget( singular_values , i), + pca_plot_vector_get_singular_value( vector ) ); + for (int j=0; j < matrix_get_columns( PC ); j++) test_assert_double_equal( matrix_iget( PC , i , j ) , pca_plot_vector_iget_sim_value( vector , j )); @@ -104,6 +117,7 @@ void test_content() { pca_plot_data_free( data ); } + double_vector_free( singular_values ); matrix_free( PC ); matrix_free( PC_obs ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_data_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_data_fs.c index fae3964f19..52dc4a776a 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_data_fs.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_data_fs.c @@ -36,7 +36,8 @@ void test_load_GEN_KW( enkf_main_type * enkf_main , const char * key , const cha enkf_plot_data_type * plot_data = enkf_plot_data_alloc( config_node ); { - enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , true , false ); + enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , true ); + enkf_plot_data_load( plot_data , enkf_fs , index_key , ANALYZED , NULL ); test_assert_int_equal( 25 , enkf_plot_data_get_size( plot_data )); { @@ -53,9 +54,8 @@ void test_load_GEN_KW( enkf_main_type * enkf_main , const char * key , const cha test_assert_false( enkf_plot_tvector_iget_active( plot_vector , 11 )); test_assert_false( enkf_plot_tvector_iget_active( plot_vector , 21 )); test_assert_false( enkf_plot_tvector_iget_active( plot_vector , 31 )); - } - enkf_fs_umount( enkf_fs ); + enkf_fs_decref( enkf_fs ); } enkf_plot_data_free( plot_data ); } @@ -68,7 +68,7 @@ void test_load_summary( enkf_main_type * enkf_main , const char * summary_key) { enkf_plot_data_type * plot_data = enkf_plot_data_alloc( config_node ); { - enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , true , false ); + enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "enkf" , true ); enkf_plot_data_load( plot_data , enkf_fs , NULL , FORECAST , NULL ); test_assert_int_equal( 25 , enkf_plot_data_get_size( plot_data )); { @@ -77,11 +77,11 @@ void test_load_summary( enkf_main_type * enkf_main , const char * summary_key) { test_assert_false( enkf_plot_tvector_iget_active( plot_vector , 0 )); test_assert_int_equal( 63 , enkf_plot_tvector_size( plot_vector )); } - enkf_fs_umount( enkf_fs ); + enkf_fs_decref( enkf_fs ); } { - enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "default" , true , false ); + enkf_fs_type * enkf_fs = enkf_main_mount_alt_fs( enkf_main , "default" , true ); enkf_plot_data_load( plot_data , enkf_fs , NULL , FORECAST , NULL ); test_assert_int_equal( 25 , enkf_plot_data_get_size( plot_data )); { @@ -94,7 +94,7 @@ void test_load_summary( enkf_main_type * enkf_main , const char * summary_key) { test_assert_true( enkf_plot_tvector_is_instance( plot_vector )); test_assert_int_equal( 0 , enkf_plot_tvector_size( plot_vector )); } - enkf_fs_umount( enkf_fs ); + enkf_fs_decref( enkf_fs ); } enkf_plot_data_free( plot_data ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw.c new file mode 100644 index 0000000000..0471ec8ec2 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw.c @@ -0,0 +1,55 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include +#include +#include + +void test_create_invalid() { + enkf_config_node_type * config_node = enkf_config_node_alloc_summary( "WWCT" , LOAD_FAIL_SILENT); + enkf_plot_gen_kw_type * gen_kw = enkf_plot_gen_kw_alloc( config_node ); + + test_assert_NULL( gen_kw ); + enkf_config_node_free( config_node ); +} + + +void test_create() { + enkf_config_node_type * config_node = enkf_config_node_new_gen_kw( "GEN_KW" , DEFAULT_GEN_KW_TAG_FORMAT, false); + + { + enkf_plot_gen_kw_type * gen_kw = enkf_plot_gen_kw_alloc( config_node ); + test_assert_true( enkf_plot_gen_kw_is_instance( gen_kw )); + test_assert_int_equal( 0 , enkf_plot_gen_kw_get_size( gen_kw )); + enkf_plot_gen_kw_free( gen_kw ); + } + + enkf_config_node_free( config_node ); +} + + + + +int main( int argc , char ** argv) { + test_create(); + test_create_invalid(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_fs.c new file mode 100644 index 0000000000..6b43be4c09 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_fs.c @@ -0,0 +1,76 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include +#include +#include +#include +#include +#include +#include + + +void test_load(const char * config_file) { + ert_test_context_type * test_context = ert_test_context_alloc( "GEN_KW" , config_file , NULL ); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + int ens_size = enkf_main_get_ensemble_size( enkf_main ); + stringlist_type * param_list = stringlist_alloc_new(); + + stringlist_append_ref( param_list , "GEN_KW"); + enkf_main_initialize_from_scratch( enkf_main , param_list , 0 , ens_size - 1 , INIT_FORCE); + { + ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config( enkf_main ); + enkf_config_node_type * config_node = ensemble_config_get_node( ensemble_config , "GEN_KW"); + enkf_plot_gen_kw_type * plot_gen_kw = enkf_plot_gen_kw_alloc( config_node ); + bool_vector_type * input_mask = bool_vector_alloc( ens_size , true ); + gen_kw_config_type * gen_kw_config = enkf_config_node_get_ref( config_node ); + + enkf_plot_gen_kw_load( plot_gen_kw , enkf_main_get_fs( enkf_main ) , true , 0 , ANALYZED , input_mask ); + + test_assert_int_equal( ens_size , enkf_plot_gen_kw_get_size( plot_gen_kw )); + + test_assert_int_equal(4, enkf_plot_gen_kw_get_keyword_count(plot_gen_kw)); + + { + enkf_plot_gen_kw_vector_type * vector = enkf_plot_gen_kw_iget( plot_gen_kw , 0 ); + for (int i=0; i < enkf_plot_gen_kw_vector_get_size( vector ); i++) + test_assert_string_equal( enkf_plot_gen_kw_iget_key( plot_gen_kw , i ) , gen_kw_config_iget_name( gen_kw_config , i)); + } + bool_vector_free( input_mask ); + } + + stringlist_free( param_list ); + ert_test_context_free( test_context ); +} + + + + + +int main( int argc , char ** argv) { + util_install_signals(); + { + const char * config_file = argv[1]; + test_load( config_file ); + exit(0); + } +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_vector.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_vector.c new file mode 100644 index 0000000000..d95bbdf539 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gen_kw_vector.c @@ -0,0 +1,44 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gen_kw_vector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include +#include +#include + + +void test_create() { + enkf_config_node_type * config_node = enkf_config_node_new_gen_kw( "GEN_KW" , DEFAULT_GEN_KW_TAG_FORMAT, false); + + enkf_plot_gen_kw_vector_type * vector = enkf_plot_gen_kw_vector_alloc( config_node , 0 ); + test_assert_true( enkf_plot_gen_kw_vector_is_instance( vector )); + test_assert_int_equal( 0 , enkf_plot_gen_kw_vector_get_size( vector )); + + enkf_plot_gen_kw_vector_free( vector ); + enkf_config_node_free( config_node ); +} + + + + +int main( int argc , char ** argv) { + test_create(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata.c new file mode 100644 index 0000000000..5185adbbbc --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata.c @@ -0,0 +1,54 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gendata.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include + +#include +#include +#include + +void test_create_invalid() { + enkf_config_node_type * config_node = enkf_config_node_alloc_summary( "WWCT" , LOAD_FAIL_SILENT); + obs_vector_type * obs_vector = obs_vector_alloc(SUMMARY_OBS , "OBS" , config_node , 100); + enkf_plot_gendata_type * gen_data = enkf_plot_gendata_alloc_from_obs_vector( obs_vector ); + test_assert_NULL( gen_data ); + enkf_config_node_free( config_node ); + obs_vector_free( obs_vector ); +} + + +void test_create() { + enkf_config_node_type * config_node = enkf_config_node_alloc_GEN_DATA_result( "key" , ASCII , "Result:%d"); + enkf_plot_gendata_type * gen_data = enkf_plot_gendata_alloc( config_node ); + test_assert_true( enkf_plot_gendata_is_instance( gen_data )); + test_assert_int_equal( 0 , enkf_plot_gendata_get_size( gen_data )); + enkf_config_node_free( config_node ); + enkf_plot_gendata_free( gen_data); +} + + + + +int main( int argc , char ** argv) { + test_create(); + test_create_invalid(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata_fs.c new file mode 100644 index 0000000000..8d576e935e --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_gendata_fs.c @@ -0,0 +1,96 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_gendata_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include + +#include +#include +#include +#include + + + + +void test_gendata( enkf_main_type * enkf_main , const char * obs_key , int report_step ) { + enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main ); + + obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key); + + { + enkf_plot_gendata_type * gen_data = enkf_plot_gendata_alloc_from_obs_vector( obs_vector ); + + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + gen_obs_type * gen_obs = obs_vector_iget_node( obs_vector , report_step ); + + { + + double value; + double std; + bool valid; + gen_obs_user_get_with_data_index(gen_obs , "0" , &value , &std , &valid ); + test_assert_double_equal( 0.143841 , value ); + test_assert_double_equal( 0.0300 , std ); + test_assert_true( valid ); + + } + + enkf_plot_gendata_load(gen_data, fs, report_step, FORECAST, NULL); + + test_assert_int_equal( enkf_main_get_ensemble_size( enkf_main ) , enkf_plot_gendata_get_size( gen_data )); + + { + enkf_plot_genvector_type * vector = enkf_plot_gendata_iget( gen_data , 24); + test_assert_true( enkf_plot_genvector_is_instance( vector )); + test_assert_double_equal( 0.675537 , enkf_plot_genvector_iget( vector , 0 )); + test_assert_double_equal( 0.682635 , enkf_plot_genvector_iget( vector , 1 )); + test_assert_double_equal( 0.616371 , enkf_plot_genvector_iget( vector , 2 )); + + + } + + { + enkf_plot_genvector_type * vector = enkf_plot_gendata_iget( gen_data , 9 ); + test_assert_true( enkf_plot_genvector_is_instance( vector )); + test_assert_double_equal( -0.515033 , enkf_plot_genvector_iget( vector , 0 )); + test_assert_double_equal( -0.507350 , enkf_plot_genvector_iget( vector , 1 )); + test_assert_double_equal( -0.541030 , enkf_plot_genvector_iget( vector , 2 )); + } + + + enkf_plot_gendata_free( gen_data ); + } + + +} + + + +int main( int argc , char ** argv) { + const char * config_file = argv[1]; + util_install_signals(); + ert_test_context_type * test_context = ert_test_context_alloc("GENDATA" , config_file , NULL ); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + + test_gendata( enkf_main , "GEN_TIMESHIFT" , 60); + + ert_test_context_free( test_context ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_genvector.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_genvector.c new file mode 100644 index 0000000000..b878af563b --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_plot_genvector.c @@ -0,0 +1,45 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_plot_genvector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include + +#include + +#include +#include +#include +#include + + +void test_create() { + enkf_config_node_type * config_node = enkf_config_node_alloc_GEN_DATA_result( "Key" , ASCII , "Result%d"); + enkf_plot_genvector_type * gen_vector = enkf_plot_genvector_alloc( config_node , 0 ); + test_assert_true( enkf_plot_genvector_is_instance( gen_vector )); + test_assert_int_equal( 0 , enkf_plot_genvector_get_size( gen_vector )); + enkf_config_node_free( config_node ); + enkf_plot_genvector_free(gen_vector); +} + + + + +int main( int argc , char ** argv) { + test_create(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_refcase_list.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_refcase_list.c index 63abc34b85..ef17e90610 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_refcase_list.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_refcase_list.c @@ -115,13 +115,13 @@ int main(int argc , char ** argv) { equal = equal && util_string_equal( stringlist_iget( case_list , i ) , ecl_refcase_list_iget_pathcase( refcase_list , i)); test_assert_true( equal ); } - + stringlist_free( case_list ); } ecl_refcase_list_add_matching( refcase_list , "DoesNotExist*"); test_assert_int_equal( 11 , ecl_refcase_list_get_size( refcase_list )); ecl_refcase_list_free( refcase_list ); } - + exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c index 1a274d4538..14786e43b3 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c @@ -27,6 +27,7 @@ #include #include +#include void * add_pathlist( void * arg ) { arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); @@ -36,31 +37,32 @@ void * add_pathlist( void * arg ) { int i; for (i=0; i < bs; i++) - runpath_list_add( list , i + offset , "Path" , "Basename"); + runpath_list_add( list , i + offset , 0, "Path" , "Basename"); return NULL; } - - - -int main(int argc , char ** argv) { - +void test_runpath_list() { runpath_list_type * list = runpath_list_alloc(); test_assert_int_equal( runpath_list_size( list ) , 0 ); - runpath_list_add( list , 3 , "path" , "base"); - runpath_list_add( list , 2 , "path" , "base"); - runpath_list_add( list , 1 , "path" , "base"); + runpath_list_add( list , 3 , 0, "path" , "base"); + runpath_list_add( list , 2 , 0, "path" , "base"); + runpath_list_add( list , 1 , 0, "path" , "base"); + + runpath_list_add( list , 3 , 1, "path" , "base"); + runpath_list_add( list , 2 , 1, "path" , "base"); + runpath_list_add( list , 1 , 1, "path" , "base"); - test_assert_int_equal( runpath_list_size( list ) , 3 ); + test_assert_int_equal( runpath_list_size( list ) , 6 ); test_assert_int_equal( runpath_list_iget_iens( list , 0 ) , 3 ); test_assert_int_equal( runpath_list_iget_iens( list , 2 ) , 1 ); + test_assert_int_equal( runpath_list_iget_iter( list , 3 ) , 1 ); runpath_list_sort( list ); test_assert_int_equal( runpath_list_iget_iens( list , 0 ) , 1 ); - test_assert_int_equal( runpath_list_iget_iens( list , 2 ) , 3 ); + test_assert_int_equal( runpath_list_iget_iens( list , 4 ) , 3 ); runpath_list_clear( list ); test_assert_int_equal( runpath_list_size( list ) , 0 ); @@ -109,14 +111,16 @@ int main(int argc , char ** argv) { { int file_iens; + int file_iter; char file_path[256]; char file_base[256]; int iens; FILE * stream = util_fopen( filename, "r"); for (iens = 0; iens < threads * block_size; iens++) { - int fscanf_return = fscanf( stream , "%d %s %s" , &file_iens , file_path , file_base); - test_assert_int_equal(fscanf_return, 3 ); + int fscanf_return = fscanf( stream , "%d %s %s %d" , &file_iens , file_path , file_base, &file_iter); + test_assert_int_equal(fscanf_return, 4 ); test_assert_int_equal( file_iens , iens ); + test_assert_int_equal( file_iter , 0 ); } fclose( stream ); } @@ -124,6 +128,33 @@ int main(int argc , char ** argv) { } } runpath_list_free( list ); +} + + + +void test_config( const char * config_file ) { + ert_test_context_type * test_context = ert_test_context_alloc( "RUNPATH_FILE" , config_file , NULL ); + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); + + ert_test_context_run_worklow( test_context , "ARGECHO_WF"); + { + FILE * stream = util_fopen("runpath_list.txt" , "r"); + char runpath_file[256]; + fscanf(stream , "%s" , runpath_file ); + fclose( stream ); + test_assert_string_equal( runpath_file , qc_module_get_runpath_list_file( qc_module )); + } + + ert_test_context_free( test_context ); +} + + + + +int main(int argc , char ** argv) { + test_runpath_list(); + test_config( argv[1] ); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job.c new file mode 100644 index 0000000000..856239ce4c --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job.c @@ -0,0 +1,58 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_select_case_job.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include +#include +#include + +#include +#include +#include +#include + + +int main(int argc , const char ** argv) { + enkf_main_install_SIGNALS(); + + const char * config_file = argv[1]; + const char * select_case_job = argv[2]; + + ert_test_context_type * test_context = ert_test_context_alloc("SELECT_CASE" , config_file , NULL); + + test_assert_true( ert_test_context_install_workflow_job( test_context , "SELECT_CASE" , select_case_job)); + { + enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "OtherCase"); + + test_assert_string_not_equal( "OtherCase" , enkf_main_get_current_fs( enkf_main )); + ert_test_context_run_worklow_job( test_context , "SELECT_CASE" , args); + test_assert_true( ert_test_context_run_worklow_job( test_context , "SELECT_CASE" , args) ); + test_assert_string_equal( "OtherCase" , enkf_main_get_current_fs( enkf_main )); + + stringlist_free( args ); + } + ert_test_context_free( test_context ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job_test.c new file mode 100644 index 0000000000..096fd6a398 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_select_case_job_test.c @@ -0,0 +1,55 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_export_field_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include +#include +#include + +#include +#include + + +int main(int argc , const char ** argv) { + enkf_main_install_SIGNALS(); + + const char * config_path = argv[1]; + const char * config_file = argv[2]; + + test_work_area_type * work_area = test_work_area_alloc(config_file ); + test_work_area_copy_directory_content( work_area , config_path ); + + enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , true , true ); + stringlist_type * args = stringlist_alloc_new(); + + stringlist_append_copy( args , "NewCase"); + + test_assert_string_not_equal( "NewCase" , enkf_main_get_current_fs( enkf_main )); + enkf_main_select_case_JOB( enkf_main , args ); + test_assert_string_equal( "NewCase" , enkf_main_get_current_fs( enkf_main )); + + stringlist_free( args ); + enkf_main_free( enkf_main ); + test_work_area_free(work_area); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_site_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_site_config.c index 0f1f672d74..af40c8655c 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_site_config.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_site_config.c @@ -19,11 +19,14 @@ #include #include #include +#include +#include #include #include #include #include +#include #include @@ -52,8 +55,10 @@ void test_init(const char * config_file) { config_type * config = config_alloc(); site_config_add_config_items( config , true ); - if (!config_parse(config , config_file , "--" , INCLUDE_KEY , DEFINE_KEY , CONFIG_UNRECOGNIZED_WARN , true)) + if (!config_parse(config , config_file , "--" , INCLUDE_KEY , DEFINE_KEY , CONFIG_UNRECOGNIZED_WARN , true)) { + config_fprintf_errors( config , true , stdout ); test_error_exit("Parsing site config file:%s failed \n",config_file ); + } if (!site_config_init( site_config , config )) test_error_exit("Loading site_config from config failed\n"); @@ -63,10 +68,45 @@ void test_init(const char * config_file) { } +void test_job_script() { + test_work_area_type * test_area = test_work_area_alloc("site-config"); + { + site_config_type * site_config = site_config_alloc_empty(); + test_assert_false( site_config_has_job_script( site_config )); + + test_assert_false( site_config_set_job_script( site_config , "/does/not/exist" )); + test_assert_false( site_config_has_job_script( site_config )); + + { + FILE * job_script = util_fopen("Script.sh" , "w"); + fclose( job_script ); + } + test_assert_false( site_config_set_job_script( site_config , "Script.sh" )); + test_assert_false( site_config_has_job_script( site_config )); + chmod("Script.sh" , S_IRWXU ); + test_assert_true( site_config_set_job_script( site_config , "Script.sh" )); + test_assert_true( site_config_has_job_script( site_config )); + + test_assert_false( site_config_set_job_script( site_config , "DoesNotExits")); + test_assert_true( site_config_has_job_script( site_config )); + { + char * full_path = util_alloc_realpath( "Script.sh" ); + test_assert_string_equal( full_path , site_config_get_job_script( site_config)); + free( full_path ); + } + site_config_free( site_config ); + } + test_work_area_free( test_area ); +} + + + int main(int argc , char ** argv) { const char * site_config_file = argv[1]; + test_empty(); test_init( site_config_file ); + test_job_script(); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c new file mode 100644 index 0000000000..f487b3d387 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c @@ -0,0 +1,103 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_state_manual_load_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include + +#include +#include +#include + +#include + + +int test_load_manually_to_new_case(enkf_main_type * enkf_main) { + const char * casename = "new_case"; + enkf_main_select_fs( enkf_main , casename ); + + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + int result = 0; + int step1 = 1; + int step2 = 1; + + arg_pack_type * arg_pack = arg_pack_alloc(); + arg_pack_append_ptr( arg_pack , enkf_main_iget_state(enkf_main, 0)); /* 0: */ + arg_pack_append_ptr( arg_pack , fs ); /* 1: */ + arg_pack_append_int( arg_pack , step1 ); /* 2: This will be the load start parameter for the run_info struct. */ + arg_pack_append_int( arg_pack , step1 ); /* 3: Step1 */ + arg_pack_append_int( arg_pack , step2 ); /* 4: Step2 For summary data it will load the whole goddamn thing anyway.*/ + arg_pack_append_bool( arg_pack , true ); /* 5: Interactive */ + arg_pack_append_owned_ptr( arg_pack , stringlist_alloc_new() , stringlist_free__); /* 6: List of interactive mode messages. */ + arg_pack_append_bool( arg_pack, true ); /* 7: Manual load */ + arg_pack_append_int( arg_pack , 0 ); /* 8: iter */ + arg_pack_append_ptr( arg_pack, &result ); /* 9: Result */ + + enkf_state_load_from_forward_model_mt(arg_pack); + + arg_pack_free(arg_pack); + return result; +} + + + +void initialize(enkf_main_type * enkf_main) { + + run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ + + int step1 = 1; + int step2 = 1; + enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + bool active = true; + int max_internal_sumbit = 1; + int init_step_parameter = 1; + state_enum init_state_parameter = FORECAST; + state_enum init_state_dynamic = FORECAST; + int load_start = 1; + + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + + bool_vector_free( iactive ); +} + + + +int main(int argc , char ** argv) { + enkf_main_install_SIGNALS(); + const char * root_path = argv[1]; + const char * config_file = argv[2]; + + test_work_area_type * work_area = test_work_area_alloc(config_file); + test_work_area_copy_directory_content( work_area , root_path ); + + bool strict = true; + enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); + + initialize(enkf_main); + + test_assert_int_equal(test_load_manually_to_new_case(enkf_main), 0); + + enkf_main_free( enkf_main ); + test_work_area_free(work_area); + + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_map.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_map.c index 5ffa556b4e..b94c80f3dd 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_map.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_map.c @@ -120,7 +120,7 @@ void test_io( ) { test_assert_true( state_map_equal( state_map , copy1 )); copy2 = state_map_alloc(); - state_map_fread( copy2 , "map" ); + test_assert_true( state_map_fread( copy2 , "map" ) ); test_assert_true( state_map_equal( state_map , copy2 )); state_map_iset( copy2 , 67 , STATE_INITIALIZED ); @@ -129,7 +129,7 @@ void test_io( ) { state_map_fread( copy2 , "map"); test_assert_true( state_map_equal( state_map , copy2 )); - state_map_fread( copy2 , "DoesNotExis"); + test_assert_false(state_map_fread( copy2 , "DoesNotExist")); test_assert_int_equal( 0 , state_map_get_size( copy2 )); } test_work_area_free( work_area ); @@ -309,7 +309,7 @@ void test_transitions() { test_assert_false( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_UNDEFINED )); test_assert_true( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_INITIALIZED )); test_assert_true( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_HAS_DATA )); - test_assert_false( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_LOAD_FAILURE )); + test_assert_true( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_LOAD_FAILURE )); test_assert_false( state_map_legal_transition(STATE_LOAD_FAILURE , STATE_PARENT_FAILURE )); test_assert_false( state_map_legal_transition(STATE_PARENT_FAILURE , STATE_UNDEFINED )); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c index c00a2a0f50..9f22748831 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c @@ -63,7 +63,8 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true ); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); bool active = true; @@ -75,7 +76,8 @@ int main(int argc , char ** argv) { int step1 = 1; int step2 = 1; - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, step1, step2); + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + bool_vector_free( iactive ); } test_assert_bool_equal(check_compatible, check_ecl_sum_compatible(enkf_main)); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c new file mode 100644 index 0000000000..e67cfe0b44 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c @@ -0,0 +1,106 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_state_runpath_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include + + + +int main(int argc , char ** argv) { + + enkf_main_install_SIGNALS(); + const char * root_path = argv[1]; + const char * config_file_single_run = argv[2]; + const char * config_file_multiple_iter = argv[3]; + + test_work_area_type * work_area = test_work_area_alloc("enkf_state_runpath_test"); + test_work_area_copy_directory_content( work_area , root_path ); + test_work_area_set_store(work_area, true); + + + { + enkf_state_type * state = NULL; + run_mode_type run_mode = ENSEMBLE_EXPERIMENT; + bool strict = true; + + bool active = true; + int max_internal_sumbit = 1; + int init_step_parameter = 1; + state_enum init_state_parameter = FORECAST; + state_enum init_state_dynamic = FORECAST; + int load_start = 1; + int step1 = 1; + int step2 = 1; + + const char * cwd = test_work_area_get_cwd(work_area); + + { + enkf_main_type * enkf_main_single_run = enkf_main_bootstrap( NULL , config_file_single_run , strict , true ); + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main_single_run ) , true ); + enkf_main_init_run(enkf_main_single_run , iactive , run_mode , INIT_NONE); /* This is ugly */ + + state = enkf_main_iget_state( enkf_main_single_run , 0 ); + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + char * path_single_run0 = util_alloc_sprintf("%s/sim/run0", cwd); + test_assert_string_equal(enkf_state_get_run_path(state), path_single_run0); + + state = enkf_main_iget_state( enkf_main_single_run, 1); + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + char * path_single_run1 = util_alloc_sprintf("%s/sim/run1", cwd); + test_assert_string_equal(enkf_state_get_run_path(state), path_single_run1); + + free(path_single_run0); + free(path_single_run1); + bool_vector_free( iactive ); + enkf_main_free(enkf_main_single_run); + } + + + { + enkf_main_type * enkf_main_iter = enkf_main_bootstrap( NULL , config_file_multiple_iter , strict , true ); + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main_iter ) , true ); + enkf_main_init_run(enkf_main_iter , iactive , run_mode , INIT_NONE); /* This is ugly */ + state = enkf_main_iget_state( enkf_main_iter , 0 ); + + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + char * path_iter0_run0 = util_alloc_sprintf("%s/sim/run0/iter0", cwd); + test_assert_string_equal(enkf_state_get_run_path(state), path_iter0_run0); + + state = enkf_main_iget_state( enkf_main_iter , 1 ); + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 1, step1, step2); + char * path_iter1_run1 = util_alloc_sprintf("%s/sim/run1/iter1", cwd); + test_assert_string_equal(enkf_state_get_run_path(state), path_iter1_run1); + + free(path_iter0_run0); + free(path_iter1_run1); + bool_vector_free( iactive ); + enkf_main_free(enkf_main_iter); + } + } + + + test_work_area_free(work_area); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c index b2794f3cac..54bda07bad 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c @@ -62,7 +62,8 @@ int main(int argc , char ** argv) { { run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , NULL , run_mode , INIT_NONE); /* This is ugly */ + bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); + enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_state_type * state2 = enkf_main_iget_state( enkf_main , 1 ); @@ -75,8 +76,9 @@ int main(int argc , char ** argv) { int step1 = 1; int step2 = 1; - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, step1, step2); - enkf_state_init_run(state2, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, step1, step2); + enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + enkf_state_init_run(state2, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + bool_vector_free( iactive ); } test_assert_true(check_ecl_sum_loaded(enkf_main)); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_time_map.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_time_map.c index 6eafb19276..fa34167b6f 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_time_map.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_time_map.c @@ -25,18 +25,20 @@ #include #include #include +#include #include #include - - +#include +#include +#include void ecl_test( const char * ecl_case ) { ecl_sum_type * ecl_sum = ecl_sum_fread_alloc_case( ecl_case , ":"); time_t start_time = ecl_sum_get_start_time( ecl_sum ); time_t end_time = ecl_sum_get_end_time( ecl_sum ); - time_map_type * ecl_map = time_map_alloc( ); + time_map_type * ecl_map = time_map_alloc( ); test_assert_true( time_map_summary_update( ecl_map , ecl_sum ) ); test_assert_true( time_map_summary_update( ecl_map , ecl_sum ) ); @@ -47,6 +49,7 @@ void ecl_test( const char * ecl_case ) { time_map_clear( ecl_map ); time_map_update( ecl_map , 1 , 256 ); + time_map_set_strict( ecl_map , false ); test_assert_false( time_map_summary_update( ecl_map , ecl_sum )); time_map_free( ecl_map ); @@ -54,12 +57,169 @@ void ecl_test( const char * ecl_case ) { } +static void map_update( void * arg ) { + vector_type * arg_vector = vector_safe_cast( arg ); + time_map_type * tmap = vector_iget( arg_vector , 0 ); + ecl_sum_type * sum = vector_iget( arg_vector , 1 ); + + time_map_summary_update( tmap , sum ); +} + + + +void test_inconsistent_summary( const char * case1, const char * case2) { + ecl_sum_type * ecl_sum1 = ecl_sum_fread_alloc_case( case1 , ":"); + ecl_sum_type * ecl_sum2 = ecl_sum_fread_alloc_case( case2 , ":"); + + time_map_type * ecl_map = time_map_alloc( ); + + test_assert_true( time_map_summary_update( ecl_map , ecl_sum1 ) ); + { + vector_type * arg = vector_alloc_new(); + vector_append_ref( arg , ecl_map ); + vector_append_ref( arg , ecl_sum2 ); + test_assert_util_abort("time_map_summary_update_abort" , map_update , arg); + vector_free( arg ); + } + + time_map_free( ecl_map ); + ecl_sum_free( ecl_sum1 ); + ecl_sum_free( ecl_sum2 ); +} + +static void alloc_index_map( void * arg) { + arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + time_map_type * map = arg_pack_iget_ptr( arg_pack , 0 ); + ecl_sum_type * sum = arg_pack_iget_ptr( arg_pack , 1 ); + + time_map_alloc_index_map( map , sum ); +} + + + +void test_refcase( const char * refcase_name , const char * case1, const char * case2 , const char * case3 , const char * case4) { + ecl_sum_type * refcase = ecl_sum_fread_alloc_case( refcase_name , ":"); + ecl_sum_type * ecl_sum1 = ecl_sum_fread_alloc_case( case1 , ":"); + ecl_sum_type * ecl_sum2 = ecl_sum_fread_alloc_case( case2 , ":"); + ecl_sum_type * ecl_sum3 = ecl_sum_fread_alloc_case( case3 , ":"); + ecl_sum_type * ecl_sum4 = ecl_sum_fread_alloc_case( case4 , ":"); + + { + time_map_type * ecl_map = time_map_alloc( ); + test_assert_false( time_map_has_refcase( ecl_map )); + test_assert_true( time_map_attach_refcase( ecl_map , refcase ) ); + test_assert_true( time_map_has_refcase( ecl_map )); + time_map_free( ecl_map ); + } + + + { + time_map_type * ecl_map = time_map_alloc( ); + time_map_attach_refcase( ecl_map , refcase ); + test_assert_true( time_map_summary_update( ecl_map , ecl_sum1 ) ); + } + + { + time_map_type * ecl_map = time_map_alloc( ); + + time_map_set_strict( ecl_map , false ); + time_map_attach_refcase( ecl_map , refcase ); + + test_assert_false( time_map_summary_update( ecl_map , ecl_sum2 ) ); + test_assert_int_equal( 25 , time_map_get_size( ecl_map )); + test_assert_true( time_map_summary_update( ecl_map , ecl_sum1 ) ); + test_assert_int_equal( 63 , time_map_get_size( ecl_map )); + } + + { + time_map_type * ecl_map = time_map_alloc( ); + test_assert_true( time_map_summary_update( ecl_map , ecl_sum2 ) ); + test_assert_false( time_map_attach_refcase( ecl_map , refcase )); + } + + + + ecl_sum_free( refcase ); + ecl_sum_free( ecl_sum1 ); + ecl_sum_free( ecl_sum2 ); + ecl_sum_free( ecl_sum3 ); + ecl_sum_free( ecl_sum4 ); +} + + +void test_index_map( const char * case1, const char * case2 , const char * case3 , const char * case4) { + ecl_sum_type * ecl_sum1 = ecl_sum_fread_alloc_case( case1 , ":"); + ecl_sum_type * ecl_sum2 = ecl_sum_fread_alloc_case( case2 , ":"); + ecl_sum_type * ecl_sum3 = ecl_sum_fread_alloc_case( case3 , ":"); + ecl_sum_type * ecl_sum4 = ecl_sum_fread_alloc_case( case4 , ":"); + + time_map_type * ecl_map = time_map_alloc( ); + + { + int_vector_type * index_map = time_map_alloc_index_map( ecl_map , ecl_sum1 ); + test_assert_int_equal( int_vector_size( index_map ) , 0); + int_vector_free( index_map ); + } + + test_assert_true( time_map_summary_update( ecl_map , ecl_sum1 ) ); + { + int_vector_type * index_map = time_map_alloc_index_map( ecl_map , ecl_sum1 ); + int i; + for (i=0; i < int_vector_size( index_map ); i++) + test_assert_int_equal( i , int_vector_iget( index_map , i )); + + test_assert_int_equal( int_vector_size( index_map ) , ecl_sum_get_last_report_step( ecl_sum1) + 1); + int_vector_free( index_map ); + } + + /* case2 has an extra tstep in the middle of the case. */ + time_map_set_strict( ecl_map , false ); + test_assert_false( time_map_summary_update( ecl_map , ecl_sum2 ) ); + { + int_vector_type * index_map = time_map_alloc_index_map( ecl_map , ecl_sum2 ); + test_assert_int_equal( int_vector_size( index_map ) , ecl_sum_get_last_report_step( ecl_sum2)); + test_assert_int_equal( int_vector_iget( index_map , 24) , 24); + test_assert_int_equal( int_vector_iget( index_map , 25) , 26); + int_vector_free( index_map ); + } + + + /* case3 has an extra tstep in the middle, and ends prematurely */ + test_assert_false( time_map_summary_update( ecl_map , ecl_sum3 ) ); + { + int_vector_type * index_map = time_map_alloc_index_map( ecl_map , ecl_sum3 ); + test_assert_int_equal( int_vector_size( index_map ) , ecl_sum_get_last_report_step( ecl_sum3)); + int_vector_free( index_map ); + } + + + /* case4 has a missing tstep in the middle - that is not handled; and we abort */ + test_assert_false( time_map_summary_update( ecl_map , ecl_sum4 ) ); + { + arg_pack_type * arg = arg_pack_alloc(); + arg_pack_append_ptr( arg , ecl_map ); + arg_pack_append_ptr( arg , ecl_sum4 ); + + test_assert_util_abort( "time_map_alloc_index_map" , alloc_index_map , arg); + arg_pack_free( arg ); + } + + + + time_map_free( ecl_map ); + ecl_sum_free( ecl_sum1 ); + ecl_sum_free( ecl_sum2 ); + ecl_sum_free( ecl_sum3 ); + ecl_sum_free( ecl_sum4 ); +} + void simple_test() { - time_map_type * time_map = time_map_alloc( ); + time_map_type * time_map = time_map_alloc( ); test_work_area_type * work_area = test_work_area_alloc("enkf_time_map" ); const char * mapfile = "map"; + time_map_set_strict( time_map , false ); test_assert_true( time_map_update( time_map , 0 , 100 ) ); test_assert_true( time_map_update( time_map , 1 , 200 ) ); test_assert_true( time_map_update( time_map , 1 , 200 ) ); @@ -68,7 +228,7 @@ void simple_test() { test_assert_true( time_map_equal( time_map , time_map ) ); time_map_fwrite( time_map , mapfile); { - time_map_type * time_map2 = time_map_alloc( ); + time_map_type * time_map2 = time_map_alloc( ); test_assert_false( time_map_equal( time_map , time_map2 ) ); time_map_fread( time_map2 , mapfile ); @@ -89,6 +249,29 @@ void simple_test() { } +static void simple_update(void * arg) { + time_map_type * tmap = time_map_safe_cast( arg ); + + time_map_update( tmap , 0 , 101 ); +} + + + +void simple_test_inconsistent() { + time_map_type * time_map = time_map_alloc( ); + + test_assert_true( time_map_update( time_map , 0 , 100 ) ); + time_map_set_strict( time_map , false ); + test_assert_false( time_map_update( time_map , 0 , 101 ) ); + + time_map_set_strict( time_map , true ); + test_assert_util_abort( "time_map_update_abort" , simple_update , time_map ); + + time_map_free( time_map ); +} + + + #define MAP_SIZE 10000 void * update_time_map( void * arg ) { @@ -103,8 +286,8 @@ void * update_time_map( void * arg ) { void thread_test() { - time_map_type * time_map = time_map_alloc( ); - + time_map_type * time_map = time_map_alloc( ); + test_assert_false( time_map_is_readonly( time_map )); { int pool_size = 1000; thread_pool_type * tp = thread_pool_alloc( pool_size/2 , true ); @@ -123,15 +306,67 @@ void thread_test() { } + +void test_read_only() { + test_work_area_type * work_area = test_work_area_alloc("time-map"); + { + time_map_type * tm = time_map_alloc( ); + + test_assert_true( time_map_is_instance( tm )); + test_assert_true( time_map_is_strict( tm )); + test_assert_false( time_map_is_readonly( tm )); + + time_map_update( tm , 0 , 0 ); + time_map_update( tm , 1 , 10 ); + time_map_update( tm , 2 , 20 ); + + time_map_fwrite( tm , "case/files/time-map" ); + time_map_free( tm ); + } + { + time_map_type * tm = time_map_fread_alloc_readonly( "case/files/time-map"); + test_assert_time_t_equal( 0 , time_map_iget( tm , 0 )); + test_assert_time_t_equal( 10 , time_map_iget( tm , 1 )); + test_assert_time_t_equal( 20 , time_map_iget( tm , 2 )); + test_assert_int_equal( 3 , time_map_get_size( tm )); + time_map_free( tm ); + } + { + time_map_type * tm = enkf_fs_alloc_readonly_time_map( "case" ); + test_assert_time_t_equal( 0 , time_map_iget( tm , 0 )); + test_assert_time_t_equal( 10 , time_map_iget( tm , 1 )); + test_assert_time_t_equal( 20 , time_map_iget( tm , 2 )); + test_assert_int_equal( 3 , time_map_get_size( tm )); + time_map_free( tm ); + } + { + time_map_type * tm = time_map_fread_alloc_readonly( "DoesNotExist"); + test_assert_true( time_map_is_instance( tm )); + test_assert_true( time_map_is_readonly( tm )); + test_assert_int_equal(0 , time_map_get_size( tm )); + time_map_free( tm ); + } + test_work_area_free( work_area ); +} + + int main(int argc , char ** argv) { - + + enkf_main_install_SIGNALS(); + ert_log_init_log(0 , NULL , false ); // Make sure there will be no logging. + if (argc == 1) { simple_test(); + simple_test_inconsistent(); thread_test(); - } else + } else { ecl_test( argv[1] ); - + test_inconsistent_summary( argv[1] , argv[2]); + test_index_map(argv[1] , argv[2] , argv[3] , argv[4]); + test_refcase( argv[1] , argv[1] , argv[2] , argv[3] , argv[4]); + } + test_read_only(); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_workflow_job_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_workflow_job_test.c new file mode 100644 index 0000000000..e0a4011f73 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_workflow_job_test.c @@ -0,0 +1,494 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'enkf_workflow_job_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include + +#include +#include + +#include +#include + + +ert_test_context_type * create_context( const char * config_file, const char * name ) { + ert_test_context_type * test_context = ert_test_context_alloc(name , config_file , NULL); + test_assert_not_NULL(test_context); + return test_context; +} + +void test_create_case_job(ert_test_context_type * test_context, const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + stringlist_append_copy( args , "newly_created_case"); + test_assert_true( ert_test_context_install_workflow_job( test_context , job_name , job_file )); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + char * new_case = util_alloc_filename( "storage" , "newly_created_case" , NULL); + test_assert_true(util_is_directory(new_case)); + free(new_case); + + stringlist_free( args ); +} + + +void test_init_case_job(ert_test_context_type * test_context, const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + + test_assert_true( ert_test_context_install_workflow_job( test_context , "JOB" , job_file ) ); + + //Test init current case from existing + { + enkf_fs_type * cur_fs = enkf_main_mount_alt_fs( enkf_main , "new_current_case" , true ); + enkf_main_select_fs(enkf_main, "new_current_case"); + + test_assert_ptr_not_equal(cur_fs , enkf_main_get_fs( enkf_main )); + + stringlist_append_copy( args, "default"); //case to init from + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + + enkf_fs_decref(cur_fs); + } + + { + const char * current_case = enkf_main_get_current_fs( enkf_main ); + test_assert_string_equal(current_case, "new_current_case"); + test_assert_true(enkf_fs_has_node(enkf_main_get_fs(enkf_main), "PERMZ", PARAMETER, 0, 0, ANALYZED)); + + enkf_fs_type * default_fs = enkf_main_mount_alt_fs( enkf_main , "default" , true ); + state_map_type * default_state_map = enkf_fs_get_state_map(default_fs); + state_map_type * current_state_map = enkf_fs_get_state_map(enkf_main_get_fs(enkf_main)); + test_assert_int_equal(state_map_get_size(default_state_map), state_map_get_size(current_state_map)); + enkf_fs_decref(default_fs); + } + + + //Test init case from existing case: + stringlist_clear(args); + stringlist_append_copy(args, "default"); //case to init from + stringlist_append_copy(args, "new_not_current_case"); + test_assert_true( ert_test_context_run_worklow_job( test_context , "JOB" , args) ); + { + enkf_fs_type * fs = enkf_main_mount_alt_fs(enkf_main, "new_not_current_case", true); + test_assert_not_NULL( fs ); + test_assert_true( enkf_fs_has_node(fs, "PERMZ", PARAMETER, 0, 0, ANALYZED )); + + enkf_fs_type * default_fs = enkf_main_mount_alt_fs( enkf_main , "default" , true ); + state_map_type * default_state_map = enkf_fs_get_state_map(default_fs); + state_map_type * new_state_map = enkf_fs_get_state_map(fs); + test_assert_int_equal(state_map_get_size(default_state_map), state_map_get_size(new_state_map)); + enkf_fs_decref(fs); + } + + stringlist_free( args ); +} + + +void test_load_results_job(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + stringlist_append_copy( args , "0"); + stringlist_append_copy( args , ","); + stringlist_append_copy( args , "1"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + stringlist_free( args ); +} + + +void test_load_results_iter_job(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + stringlist_append_copy( args , "0"); + stringlist_append_copy( args , "0"); + stringlist_append_copy( args , ","); + stringlist_append_copy( args , "1"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + stringlist_free( args ); +} + + +void test_rank_realizations_on_observations_job(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + + stringlist_append_copy( args , "NameOfObsRanking1"); + stringlist_append_copy( args , "|"); + stringlist_append_copy( args , "WOPR:*"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking2"); + stringlist_append_copy( args, "1-5"); + stringlist_append_copy( args, "55"); + stringlist_append_copy( args , "|"); + stringlist_append_copy( args , "WWCT:*"); + stringlist_append_copy( args , "WOPR:*"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking3"); + stringlist_append_copy( args, "5"); + stringlist_append_copy( args, "55"); + stringlist_append_copy( args, "|"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking4"); + stringlist_append_copy( args, "1,3,5-10"); + stringlist_append_copy( args, "55"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking5"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking6"); + stringlist_append_copy( args, "|"); + stringlist_append_copy( args , "UnrecognizableObservation"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_free( args ); +} + + +void test_rank_realizations_on_data_job(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + + stringlist_append_copy( args , "NameOfDataRanking"); + stringlist_append_copy( args , "PORO:1,2,3"); + stringlist_append_copy( args , "false"); + stringlist_append_copy( args , "0"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfDataRanking2"); + stringlist_append_copy( args , "PORO:1,2,3"); + stringlist_append_copy( args , "false"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_free( args ); +} + +void test_export_ranking(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + + stringlist_append_copy( args , "NameOfDataRanking"); + stringlist_append_copy( args , "/tmp/fileToSaveDataRankingIn.txt"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking1"); + stringlist_append_copy( args , "/tmp/fileToSaveObservationRankingIn1.txt"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_clear(args); + stringlist_append_copy( args , "NameOfObsRanking6"); + stringlist_append_copy( args , "/tmp/fileToSaveObservationRankingIn6.txt"); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + stringlist_free( args ); +} + + +void test_init_misfit_table(ert_test_context_type * test_context , const char * job_name , const char * job_file) { + stringlist_type * args = stringlist_alloc_new(); + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + + misfit_ensemble_type * misfit_ensemble = enkf_fs_get_misfit_ensemble( fs ); + test_assert_false(misfit_ensemble_initialized(misfit_ensemble)); + + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + test_assert_true(misfit_ensemble_initialized(misfit_ensemble)); + + stringlist_free( args ); +} + + + + +static void test_export_runpath_file(ert_test_context_type * test_context, + const char * job_name, + const char * job_file, + stringlist_type * args, + int_vector_type * iens_values, + int_vector_type * iter_values) { + + ert_test_context_install_workflow_job( test_context , job_name , job_file ); + test_assert_true( ert_test_context_run_worklow_job( test_context , job_name , args) ); + + { + const enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); + const char * runpath_file_name = qc_module_get_runpath_list_file(qc_module); + + ecl_config_type * ecl_config = enkf_main_get_ecl_config(enkf_main); + const model_config_type * model_config = enkf_main_get_model_config(enkf_main); + const char * base_fmt = ecl_config_get_eclbase(ecl_config); + const char * runpath_fmt = model_config_get_runpath_as_char(model_config); + + test_assert_true(util_file_exists(runpath_file_name)); + FILE * file = util_fopen(runpath_file_name, "r"); + + int file_iens = 0; + char file_path[256]; + char file_base[256]; + int file_iter = 0; + char * cwd = util_alloc_cwd(); + int counter = 0; + int iens_index = 0; + int iter_index = 0; + + while (4 == fscanf( file , "%d %s %s %d" , &file_iens , file_path , file_base, &file_iter)) { + ++ counter; + + test_assert_true(int_vector_size(iens_values) >= iens_index+1); + test_assert_true(int_vector_size(iter_values) >= iter_index+1); + + int iens = int_vector_iget(iens_values, iens_index); + int iter = int_vector_iget(iter_values, iter_index); + + test_assert_int_equal(file_iens, iens); + test_assert_int_equal(file_iter, iter); + + char * base = util_alloc_sprintf("--%d", iens); + if (base_fmt && (util_int_format_count(base_fmt) == 1)) + base = util_alloc_sprintf(base_fmt, iens); + + test_assert_string_equal(base, file_base); + + char * runpath = ""; + if (util_int_format_count(runpath_fmt) == 1) + runpath = util_alloc_sprintf(runpath_fmt, iens); + else if (util_int_format_count(runpath_fmt) == 2) + runpath = util_alloc_sprintf(runpath_fmt, iens,iter); + + test_assert_string_equal(runpath, file_path); + + if (iens_index+1 < int_vector_size(iens_values)) + ++iens_index; + else if ((iens_index+1 == int_vector_size(iens_values))) { + ++iter_index; + iens_index = 0; + } + + free(base); + free(runpath); + } + + int linecount = int_vector_size(iens_values) * int_vector_size(iter_values); + test_assert_int_equal(linecount, counter); + free(cwd); + fclose(file); + } +} + + + +void test_export_runpath_files(const char * config_file, + const char * config_file_iterations, + const char * job_file_export_runpath) { + + stringlist_type * args = stringlist_alloc_new(); + const char * job_name = "export_job"; + + ert_test_context_type * test_context_iterations = create_context( config_file_iterations, "enkf_workflow_job_test_export_runpath_iter" ); + + { + int_vector_type * iens_values = int_vector_alloc(5,0); + const int iens[5] = {0,1,2,3,4}; + int_vector_set_many(iens_values, 0, &iens[0], 5); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context_iterations, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + } + { + stringlist_append_copy( args, "0-2"); //realization range + + int_vector_type * iens_values = int_vector_alloc(3,0); + const int iens[] = {0,1,2}; + int_vector_set_many(iens_values, 0, &iens[0], 3); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context_iterations, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + { + stringlist_append_copy( args, "0,3-5"); //realization range + + int_vector_type * iens_values = int_vector_alloc(4,0); + const int iens[] = {0,3,4,5}; + int_vector_set_many(iens_values, 0, &iens[0], 4); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context_iterations, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + { + stringlist_append_copy( args, "1-2"); //realization range + stringlist_append_copy( args, "|"); //delimiter + stringlist_append_copy( args, "1-3"); //iteration range + + int_vector_type * iens_values = int_vector_alloc(2,0); + int iens[] = {1,2}; + int_vector_set_many(iens_values, 0, &iens[0], 2); + int_vector_type * iter_values = int_vector_alloc(3,0); + int iter[] = {1,2,3}; + int_vector_set_many(iter_values, 0, &iter[0], 3); + + test_export_runpath_file(test_context_iterations, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + { + stringlist_append_copy( args, "*"); //realization range + stringlist_append_copy( args, "|"); //delimiter + stringlist_append_copy( args, "*"); //iteration range + + int_vector_type * iens_values = int_vector_alloc(5,0); + int iens[] = {0,1,2,3,4}; + int_vector_set_many(iens_values, 0, &iens[0], 5); + int_vector_type * iter_values = int_vector_alloc(4,0); + int iter[] = {0,1,2,3}; + int_vector_set_many(iter_values, 0, &iter[0], 4); + + test_export_runpath_file(test_context_iterations, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + + ert_test_context_free(test_context_iterations); + ert_test_context_type * test_context = create_context( config_file, "enkf_workflow_job_test_export_runpath" ); + + { + int_vector_type * iens_values = int_vector_alloc(1,0); + int_vector_init_range(iens_values, 0, 24, 1); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + { + stringlist_append_copy( args, "1-3"); //realization range + + int_vector_type * iens_values = int_vector_alloc(3,0); + int iens[] = {1,2,3}; + int_vector_set_many(iens_values, 0, &iens[0], 3); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + { + stringlist_append_copy( args, "1,2"); //realization range + stringlist_append_copy( args, "|"); //delimiter + stringlist_append_copy( args, "1-3"); //iteration range + + int_vector_type * iens_values = int_vector_alloc(2,0); + int iens[] = {1,2}; + int_vector_set_many(iens_values, 0, &iens[0], 2); + int_vector_type * iter_values = int_vector_alloc(1,0); + + test_export_runpath_file(test_context, job_name, job_file_export_runpath, args, iens_values, iter_values); + + int_vector_free(iens_values); + int_vector_free(iter_values); + + stringlist_clear(args); + } + + + ert_test_context_free(test_context); + + + stringlist_free( args ); +} + + + + + +int main(int argc , const char ** argv) { + enkf_main_install_SIGNALS(); + + const char * config_file = argv[1]; + const char * config_file_iterations = argv[2]; + const char * job_file_create_case = argv[3]; + const char * job_file_init_case_job = argv[4]; + const char * job_file_load_results = argv[5]; + const char * job_file_load_results_iter = argv[6]; + const char * job_file_observation_ranking = argv[7]; + const char * job_file_data_ranking = argv[8]; + const char * job_file_ranking_export = argv[9]; + const char * job_file_init_misfit_table = argv[10]; + const char * job_file_export_runpath = argv[11]; + + + ert_test_context_type * test_context = create_context( config_file, "enkf_workflow_job_test" ); + { + test_create_case_job(test_context, "JOB1" , job_file_create_case); + test_init_case_job(test_context, "JOB2", job_file_init_case_job); + test_load_results_job(test_context, "JOB3" , job_file_load_results); + test_load_results_iter_job( test_context, "JOB4" , job_file_load_results_iter ); + test_init_misfit_table(test_context, "JOB5" , job_file_init_misfit_table); + test_rank_realizations_on_observations_job(test_context, "JOB6" , job_file_observation_ranking); + test_rank_realizations_on_data_job(test_context , "JOB7" , job_file_data_ranking); + test_export_ranking(test_context, "JOB8" , job_file_ranking_export); + } + ert_test_context_free( test_context ); + + test_export_runpath_files(config_file, config_file_iterations, job_file_export_runpath); + + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c b/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c new file mode 100644 index 0000000000..532413e398 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c @@ -0,0 +1,87 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'gen_kw_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include +#include + +#include +#include +#include + +#include +#include +#include + + + +void test_send_fortio_to_gen_kw_ecl_write(void * arg) { + enkf_main_type * enkf_main = arg; + test_assert_not_NULL(enkf_main); + fortio_type * fortio = fortio_open_writer("my_new_file", false, ECL_ENDIAN_FLIP); + test_assert_not_NULL(fortio); + + enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + test_assert_not_NULL(state); + enkf_node_type * enkf_node = enkf_state_get_node( state , "MULTFLT" ); + test_assert_not_NULL(enkf_node); + const enkf_config_node_type * config_node = enkf_node_get_config(enkf_node); + test_assert_not_NULL(config_node); + + if (GEN_KW == enkf_config_node_get_impl_type(config_node)) { + const char * dummy_path = "dummy_path"; + enkf_node_ecl_write(enkf_node, dummy_path, fortio, 0); + } +} + + +void test_write_gen_kw_export_file(enkf_main_type * enkf_main) +{ + test_assert_not_NULL(enkf_main); + enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + test_assert_not_NULL(state); + enkf_node_type * enkf_node = enkf_state_get_node( state , "MULTFLT" ); + test_assert_not_NULL(enkf_node); + const enkf_config_node_type * config_node = enkf_node_get_config(enkf_node); + test_assert_not_NULL(config_node); + + if (GEN_KW == enkf_config_node_get_impl_type(config_node)) { + enkf_fs_type * fs = enkf_main_get_fs(enkf_main); + enkf_state_ecl_write(state, fs); + test_assert_true(util_file_exists("parameters.txt")); + } +} + + +int main(int argc , char ** argv) { + const char * config_file = argv[1]; + ert_test_context_type * test_context = ert_test_context_alloc("gen_kw_test" , config_file , NULL); + enkf_main_type * enkf_main = ert_test_context_get_main(test_context); + test_assert_not_NULL(enkf_main); + + test_write_gen_kw_export_file(enkf_main); + test_assert_util_abort("gen_kw_ecl_write", test_send_fortio_to_gen_kw_ecl_write, enkf_main); + + ert_test_context_free( test_context ); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/libenkf/tests/obs_vector_tests.c b/ThirdParty/Ert/devel/libenkf/tests/obs_vector_tests.c index 5bf7f83fc6..17064c4c6b 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/obs_vector_tests.c +++ b/ThirdParty/Ert/devel/libenkf/tests/obs_vector_tests.c @@ -94,6 +94,7 @@ bool scale_std_block_nodata_no_errors() { } block_obs_type * create_block_obs(ecl_grid_type * grid, int size, double value, double std_dev) { + field_config_type * field_config = field_config_alloc_empty( "PRESSURE" , grid , NULL, false ); int * i = util_calloc(size, sizeof * i); int * j = util_calloc(size, sizeof * j); int * k = util_calloc(size, sizeof * k); @@ -108,14 +109,15 @@ block_obs_type * create_block_obs(ecl_grid_type * grid, int size, double value, k[num] = num; } - block_obs_type * block_obs = block_obs_alloc("Label", SOURCE_FIELD, NULL, NULL, grid, size, i, j, k, obs_value, obs_std); + block_obs_type * block_obs = block_obs_alloc_complete("Label", SOURCE_FIELD, NULL, field_config , grid, size, i, j, k, obs_value, obs_std); free(i); free(j); free(k); free(obs_value); free(obs_std); - + field_config_free( field_config ); + return block_obs; } diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/block_fs.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/block_fs.h index 2255c2ded4..5ce28f2c53 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/block_fs.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/block_fs.h @@ -40,7 +40,15 @@ extern "C" { bool block_fs_rotate( block_fs_type * block_fs , double fragmentation_limit); void block_fs_fsync( block_fs_type * block_fs ); bool block_fs_is_mount( const char * mount_file ); - block_fs_type * block_fs_mount( const char * mount_file , int block_size , int max_cache_size , float fragmentation_limit , int fsync_interval , bool preload , bool read_only); + bool block_fs_is_readonly( const block_fs_type * block_fs); + block_fs_type * block_fs_mount( const char * mount_file , + int block_size , + int max_cache_size , + float fragmentation_limit , + int fsync_interval , + bool preload , + bool read_only, + bool use_lockfile); void block_fs_close( block_fs_type * block_fs , bool unlink_empty); void block_fs_fwrite_file(block_fs_type * block_fs , const char * filename , const void * ptr , size_t byte_size); void block_fs_fwrite_buffer(block_fs_type * block_fs , const char * filename , const buffer_type * buffer); @@ -61,6 +69,7 @@ extern "C" { const char * user_file_node_get_filename( const user_file_node_type * user_file_node ); UTIL_IS_INSTANCE_HEADER( block_fs ); +UTIL_SAFE_CAST_HEADER( block_fs ); #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/log.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/log.h index 01a243cfbe..0c4c080070 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/log.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/log.h @@ -41,6 +41,7 @@ typedef struct log_struct log_type; int log_get_level( const log_type * logh); void log_set_level( log_type * logh , int log_level); bool log_is_open( const log_type * logh); + bool log_include_message(const log_type *logh , int message_level); #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix.h index 7c2a466570..5cf59b4546 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix.h @@ -34,10 +34,14 @@ extern "C" { typedef struct matrix_struct matrix_type; + matrix_type * matrix_fread_alloc(FILE * stream); + void matrix_fread(matrix_type * matrix , FILE * stream); + void matrix_fwrite(const matrix_type * matrix , FILE * stream); bool matrix_check_dims( const matrix_type * m , int rows , int columns); void matrix_fscanf_data( matrix_type * matrix , bool row_major_order , FILE * stream ); void matrix_fprintf( const matrix_type * matrix , const char * fmt , FILE * stream ); void matrix_pretty_fprint(const matrix_type * matrix , const char * name , const char * fmt , FILE * stream); + void matrix_pretty_fprint_submat(const matrix_type * matrix , const char * name , const char * fmt , FILE * stream, int m, int M, int n, int N); matrix_type * matrix_alloc(int rows, int columns); matrix_type * matrix_safe_alloc(int rows, int columns); bool matrix_resize(matrix_type * matrix , int rows , int columns , bool copy_content); @@ -111,6 +115,7 @@ typedef struct matrix_struct matrix_type; void matrix_get_dims(const matrix_type * matrix , int * rows , int * columns , int * row_stride , int * column_stride); bool matrix_is_quadratic(const matrix_type * matrix); bool matrix_equal( const matrix_type * m1 , const matrix_type * m2); + bool matrix_columns_equal( const matrix_type * m1 , int col1 , const matrix_type * m2 , int col2); void matrix_diag_set_scalar(matrix_type * matrix , double value); void matrix_diag_set(matrix_type * matrix , const double * diag); @@ -131,6 +136,7 @@ typedef struct matrix_struct matrix_type; void matrix_create_identiy(int n,matrix_type *Id); double matrix_trace(const matrix_type *matrix); double matrix_diag_std(const matrix_type * Sk,double mean); + double matrix_det2( const matrix_type * A); double matrix_det3( const matrix_type * A); double matrix_det4( const matrix_type * A); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix_blas.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix_blas.h index 69bd88c37a..2cfa755b47 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix_blas.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/matrix_blas.h @@ -16,6 +16,8 @@ for more details. */ +#ifndef __MATRIX_BLAS__ +#define __MATRIX_BLAS__ #include #include @@ -27,6 +29,7 @@ extern "C" { void matrix_dgemm(matrix_type *C , const matrix_type *A , const matrix_type * B , bool transA, bool transB , double alpha , double beta); +void matrix_matmul_with_transpose(matrix_type * C, const matrix_type * A , const matrix_type * B , bool transA , bool transB); void matrix_matmul(matrix_type * A, const matrix_type *B , const matrix_type * C); matrix_type * matrix_alloc_matmul(const matrix_type * A, const matrix_type * B); void matrix_dgemv(const matrix_type * A , const double * x , double * y , bool transA , double alpha , double beta); @@ -39,3 +42,4 @@ matrix_type * matrix_alloc_gram( const matrix_type * X , bool col); } #endif +#endif diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/statistics.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/statistics.h index 1c6f3ec694..f1daa9c874 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/statistics.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/statistics.h @@ -24,6 +24,7 @@ extern "C" { #endif #include +double statistics_std( const double_vector_type * data_vector ); double statistics_mean( const double_vector_type * data_vector ); double statistics_empirical_quantile( double_vector_type * data , double quantile ); double statistics_empirical_quantile__( const double_vector_type * data , double quantile ); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/stringlist.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/stringlist.h index 575b033b5b..9087c2e22a 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/stringlist.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/stringlist.h @@ -52,6 +52,7 @@ typedef int ( string_cmp_ftype) (const void * , const void *); bool stringlist_iequal( const stringlist_type * stringlist , int index, const char * s ); const char * stringlist_iget(const stringlist_type * , int); int stringlist_iget_as_int( const stringlist_type * stringlist , int index , bool * valid); + bool stringlist_iget_as_bool( const stringlist_type * stringlist, int index, bool * valid); char * stringlist_iget_copy(const stringlist_type * stringlist , int ); char * stringlist_alloc_joined_string(const stringlist_type * , const char * ); char * stringlist_alloc_joined_substring( const stringlist_type * s , int start_index , int end_index , const char * sep ); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/struct_vector.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/struct_vector.h new file mode 100644 index 0000000000..88e4adc54f --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/struct_vector.h @@ -0,0 +1,43 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'struct_vector.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __STRUCT_VECTOR_H__ +#define __STRUCT_VECTOR_H__ + +#ifdef __cplusplus +extern "C" { +#endif +#include + + +typedef struct struct_vector_struct struct_vector_type; + + + struct_vector_type * struct_vector_alloc( int element_size ); + void struct_vector_free( struct_vector_type * struct_vector ); + int struct_vector_get_size( const struct_vector_type * struct_vector ); + void struct_vector_append( struct_vector_type * struct_vector , void * value); + void struct_vector_iget( const struct_vector_type * struct_vector , int index , void * value); + void struct_vector_reset( struct_vector_type * struct_vector ); + + UTIL_IS_INSTANCE_HEADER( struct_vector ); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h index 548ba35518..836a27ccd2 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h @@ -50,9 +50,11 @@ extern "C" { char * subst_list_alloc_filtered_string(const subst_list_type * , const char * ); void subst_list_filtered_fprintf(const subst_list_type * , const char * , FILE * ); int subst_list_get_size( const subst_list_type *); + const char * subst_list_get_value( subst_list_type * subst_list , const char * key); const char * subst_list_iget_value( const subst_list_type * subst_list , int index); const char * subst_list_iget_key( const subst_list_type * subst_list , int index); const char * subst_list_iget_doc_string( const subst_list_type * subst_list , int index); + bool subst_list_has_key( const subst_list_type * subst_list , const char * key); char * subst_list_alloc_string_representation( const subst_list_type * subst_list ); int subst_list_add_from_string( subst_list_type * subst_list , const char * arg_string, bool append); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/test_util.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/test_util.h index 92721b931d..a8c6b292ee 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/test_util.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/test_util.h @@ -36,6 +36,9 @@ extern "C" { #define test_assert_string_equal( s1 , s2 ) test_assert_string_equal__(s1 , s2 , __FILE__ , __LINE__) void test_assert_string_equal__( const char * s1 , const char * s2 , const char * file , int line); +#define test_assert_string_not_equal( s1 , s2 ) test_assert_string_not_equal__(s1 , s2 , __FILE__ , __LINE__) + void test_assert_string_not_equal__( const char * s1 , const char * s2 , const char * file , int line); + bool test_check_string_equal( const char *s1 , const char * s2); #define test_assert_int_equal( i1 , i2 ) test_assert_int_equal__( (i1) , (i2) , __FILE__ , __LINE__ ) @@ -55,6 +58,10 @@ extern "C" { void test_assert_double_equal__( double d1 , double d2 , const char * file , int line ); bool test_check_double_equal( double d1 , double d2); +#define test_assert_float_equal( d1 , d2 ) test_assert_float_equal__( (d1) , (d2) , __FILE__ , __LINE__ ) + void test_assert_float_equal__( float d1 , float d2 , const char * file , int line ); + bool test_check_float_equal( float d1 , float d2); + #define test_assert_double_not_equal( d1 , d2 ) test_assert_double_not_equal__( (d1) , (d2) , __FILE__ , __LINE__ ) void test_assert_double_not_equal__( double d1 , double d2 , const char * file , int line ); @@ -96,7 +103,9 @@ extern "C" { #ifdef HAVE_UTIL_ABORT +#include void test_util_addr2line(); + void test_assert_util_abort(const char * function_name , void (void *) , void * arg); #endif void test_install_SIGNALS(void); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h index aeefb0d4e9..0a2df6e834 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h @@ -5,6 +5,9 @@ extern "C" { #endif +#include + + /*****************************************************************/ /** @@ -69,7 +72,7 @@ type ## _type * type ## _safe_cast( void * __arg ) { if ( arg->__type_id == TYPE_ID) \ return arg; \ else { \ - util_abort("%s: runtime cast failed: File:%s Line:%d. Got:%d Expected:%d \n", __func__ , __FILE__ , __LINE__ , arg->__type_id , TYPE_ID); \ + util_abort("%s: runtime cast failed: Got ID:%d Expected: ID%d \n", __func__ , arg->__type_id , TYPE_ID); \ return NULL; \ } \ } \ @@ -88,7 +91,7 @@ const type ## _type * type ## _safe_cast_const( const void * __arg ) { if ( arg->__type_id == TYPE_ID) \ return arg; \ else { \ - util_abort("%s: runtime cast failed: File:%s Line:%d. Got:%d Expected:%d \n", __func__ , __FILE__ , __LINE__ , arg->__type_id , TYPE_ID); \ + util_abort("%s: runtime cast failed: Got ID:%d Expected: ID%d \n", __func__ , arg->__type_id , TYPE_ID); \ return NULL; \ } \ } \ diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/util.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/util.h index 4220ed1bc1..7f903025e0 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/util.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/util.h @@ -26,6 +26,10 @@ #include #include +#ifdef COMPILER_GCC +#include +#endif + #ifdef HAVE_GETPWUID #include #endif @@ -127,6 +131,7 @@ typedef enum {left_pad = 0, void util_fprintf_double(double , int , int , char , FILE *); bool util_fscanf_date(FILE * , time_t *); bool util_sscanf_date(const char * , time_t *); + bool util_sscanf_percent(const char * string, double * value); char * util_alloc_stdin_line(); char * util_realloc_stdin_line(char * ); bool util_is_executable(const char * ); @@ -150,7 +155,7 @@ typedef enum {left_pad = 0, bool util_string_equal(const char * s1 , const char * s2 ); char * util_alloc_strupr_copy(const char * ); void util_string_tr(char * , char , char); - bool util_copy_stream(FILE *, FILE *, int , void * , bool abort_on_error); + bool util_copy_stream(FILE *, FILE *, size_t , void * , bool abort_on_error); void util_move_file(const char * src_file , const char * target_file); void util_move_file4( const char * src_name , const char * target_name , const char *src_path , const char * target_path); bool util_copy_file(const char * , const char * ); @@ -288,8 +293,10 @@ typedef enum {left_pad = 0, char * util_alloc_dump_filename(); void util_exit(const char * fmt , ...); - void util_abort(const char * fmt , ...); + void util_abort__(const char * file , const char * function , int line , const char * fmt , ...); + void util_abort_signal(int ); + void util_install_signals(void); void util_abort_append_version_info(const char * ); void util_abort_free_version_info(); void util_abort_set_executable( const char * argv0 ); @@ -368,6 +375,7 @@ typedef enum {left_pad = 0, double util_kahan_sum(const double *data, size_t N); bool util_double_approx_equal( double d1 , double d2); bool util_double_approx_equal__( double d1 , double d2, double epsilon); + bool util_float_approx_equal__( float d1 , float d2, float epsilon); int util_fnmatch( const char * pattern , const char * string ); void util_localtime( time_t * t , struct tm * ts ); @@ -460,6 +468,23 @@ typedef struct { const char * util_enum_iget( int index , int size , const util_enum_element_type * enum_defs , int * value); +#ifdef COMPILER_GCC + +jmp_buf * util_abort_test_jump_buffer(); +void util_abort_test_set_intercept_function(const char * function); + +#define util_abort(fmt , ...) util_abort__(__FILE__ , __func__ , __LINE__ , fmt , ##__VA_ARGS__) +#endif + +#ifdef __clang__ +#define util_abort(fmt , ...) util_abort__(__FILE__ , __func__ , __LINE__ , fmt , ##__VA_ARGS__) +#endif + +#ifdef COMPILER_MSVC +#define util_abort(fmt , ...) util_abort__(__FILE__ , __func__ , __LINE__ , fmt , __VA_ARGS__) +#endif + + /*****************************************************************/ /* Conditional section below here */ diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/vector.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/vector.h index b6f0cee0d9..be2f724f31 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/vector.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/vector.h @@ -83,6 +83,7 @@ extern "C" { void vector_iset_buffer(vector_type * vector , int index , const void * buffer, int buffer_size); UTIL_IS_INSTANCE_HEADER( vector ); + UTIL_SAFE_CAST_HEADER( vector ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/vector_template.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/vector_template.h index 9b5b25f297..ea74fb5e8f 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/vector_template.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/vector_template.h @@ -36,12 +36,13 @@ typedef @TYPE@ (@TYPE@_ftype) (@TYPE@); void @TYPE@_vector_inplace_div( @TYPE@_vector_type * vector , const @TYPE@_vector_type * inv_factor); void @TYPE@_vector_inplace_mul( @TYPE@_vector_type * vector , const @TYPE@_vector_type * factor); void @TYPE@_vector_inplace_add( @TYPE@_vector_type * vector , const @TYPE@_vector_type * delta); + void @TYPE@_vector_inplace_sub( @TYPE@_vector_type * vector , const @TYPE@_vector_type * delta); void @TYPE@_vector_set_read_only( @TYPE@_vector_type * vector , bool read_only); bool @TYPE@_vector_get_read_only( const @TYPE@_vector_type * vector ); - void @TYPE@_vector_resize( @TYPE@_vector_type * vector , int new_alloc_size ); void @TYPE@_vector_memcpy_data( @TYPE@ * target, const @TYPE@_vector_type * src ); + void @TYPE@_vector_memcpy_from_data( @TYPE@_vector_type * target , const @TYPE@ * src , int src_size ); void @TYPE@_vector_memcpy( @TYPE@_vector_type * target , const @TYPE@_vector_type * src); - void @TYPE@_vector_memcpy_data_block( @TYPE@_vector_type * target , const @TYPE@_vector_type * src , int target_offset , int src_offset , int len); + void @TYPE@_vector_memcpy_data_block( @TYPE@_vector_type * target , const @TYPE@_vector_type * src , int target_offset , int src_offset , int len); bool @TYPE@_vector_growable( const @TYPE@_vector_type * vector); void @TYPE@_vector_select_unique(@TYPE@_vector_type * vector); @TYPE@_vector_type * @TYPE@_vector_alloc( int init_size , @TYPE@ ); @@ -60,9 +61,12 @@ typedef @TYPE@ (@TYPE@_ftype) (@TYPE@); int @TYPE@_vector_get_min_index(const @TYPE@_vector_type * vector, bool reverse); int @TYPE@_vector_get_max_index(const @TYPE@_vector_type * vector, bool reverse); @TYPE@ @TYPE@_vector_iadd( @TYPE@_vector_type * vector , int index , @TYPE@ delta); + void @TYPE@_vector_resize( @TYPE@_vector_type * vector , int new_size ); void @TYPE@_vector_iset(@TYPE@_vector_type * , int , @TYPE@); + void @TYPE@_vector_iset_block(@TYPE@_vector_type * vector , int index , int block_size , @TYPE@ value); void @TYPE@_vector_idel_block( @TYPE@_vector_type * vector , int index , int block_size); @TYPE@ @TYPE@_vector_idel( @TYPE@_vector_type * vector , int index); + @TYPE@ @TYPE@_vector_del_value( @TYPE@_vector_type * vector , @TYPE@ del_value); void @TYPE@_vector_insert( @TYPE@_vector_type * vector , int index , @TYPE@ value); void @TYPE@_vector_append(@TYPE@_vector_type * , @TYPE@); void @TYPE@_vector_free_container(@TYPE@_vector_type * vector); @@ -72,6 +76,8 @@ typedef @TYPE@ (@TYPE@_ftype) (@TYPE@); void @TYPE@_vector_reset(@TYPE@_vector_type *); void @TYPE@_vector_reset__(void * __vector); int @TYPE@_vector_size(const @TYPE@_vector_type * ); + void @TYPE@_vector_lshift(@TYPE@_vector_type * vector , int shift); + void @TYPE@_vector_rshift(@TYPE@_vector_type * vector , int shift); @TYPE@ @TYPE@_vector_pop(@TYPE@_vector_type * vector); @TYPE@ @TYPE@_vector_get_first(const @TYPE@_vector_type * vector); @TYPE@ @TYPE@_vector_get_last(const @TYPE@_vector_type * ); @@ -90,6 +96,8 @@ typedef @TYPE@ (@TYPE@_ftype) (@TYPE@); void @TYPE@_vector_append_default(@TYPE@_vector_type * vector , @TYPE@ default_value); void @TYPE@_vector_iset_default(@TYPE@_vector_type * vector , int index , @TYPE@ default_value); bool @TYPE@_vector_is_sorted( const @TYPE@_vector_type * vector , bool reverse); + bool @TYPE@_vector_contains(const @TYPE@_vector_type * vector , @TYPE@ value); + bool @TYPE@_vector_contains_sorted(const @TYPE@_vector_type * vector , @TYPE@ value); int @TYPE@_vector_index(const @TYPE@_vector_type * vector , @TYPE@ value); int @TYPE@_vector_index_sorted(const @TYPE@_vector_type * vector , @TYPE@ value); void @TYPE@_vector_sort(@TYPE@_vector_type * vector); @@ -110,8 +118,9 @@ typedef @TYPE@ (@TYPE@_ftype) (@TYPE@); void @TYPE@_vector_apply(@TYPE@_vector_type * vector , @TYPE@_ftype *func); int @TYPE@_vector_count_equal( const @TYPE@_vector_type * vector , @TYPE@ cmp_value); int @TYPE@_vector_element_size( const @TYPE@_vector_type * vector ); + void @TYPE@_vector_range_fill(@TYPE@_vector_type * vector , @TYPE@ limit1 , @TYPE@ delta , @TYPE@ limit2); - //UTIL_SAFE_CAST_HEADER( @TYPE@_vector ); + UTIL_SAFE_CAST_HEADER( @TYPE@_vector ); UTIL_IS_INSTANCE_HEADER( @TYPE@_vector ); #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libert_util/src/CMakeLists.txt b/ThirdParty/Ert/devel/libert_util/src/CMakeLists.txt index 70600e33b7..38555eb0b9 100644 --- a/ThirdParty/Ert/devel/libert_util/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libert_util/src/CMakeLists.txt @@ -1,10 +1,110 @@ -set(source_files rng.c lookup_table.c statistics.c mzran.c set.c hash_node.c hash_sll.c hash.c node_data.c node_ctype.c util.c thread_pool.c msg.c arg_pack.c path_fmt.c menu.c subst_list.c subst_func.c vector.c parser.c stringlist.c matrix.c buffer.c log.c template.c timer.c time_interval.c string_util.c type_vector_functions.c ui_return.c) - -set(header_files ssize_t.h type_macros.h rng.h lookup_table.h statistics.h mzran.h set.h hash.h hash_node.h hash_sll.h node_data.h node_ctype.h util.h thread_pool.h msg.h arg_pack.h path_fmt.h stringlist.h menu.h subst_list.h subst_func.h vector.h parser.h matrix.h buffer.h log.h template.h timer.h time_interval.h string_util.h type_vector_functions.h ui_return.h) +set(source_files + rng.c + lookup_table.c + statistics.c + mzran.c + set.c + hash_node.c + hash_sll.c + hash.c + node_data.c + node_ctype.c + util.c + thread_pool.c + msg.c + arg_pack.c + path_fmt.c + menu.c + subst_list.c + subst_func.c + vector.c + parser.c + stringlist.c + matrix.c + buffer.c + log.c + template.c + timer.c + time_interval.c + string_util.c + type_vector_functions.c + ui_return.c + version.c + struct_vector.c +) + +set(header_files + ssize_t.h + type_macros.h + rng.h + lookup_table.h + statistics.h + mzran.h + set.h + hash.h + hash_node.h + hash_sll.h + node_data.h + node_ctype.h + util.h + thread_pool.h + msg.h + arg_pack.h + path_fmt.h + stringlist.h + menu.h + subst_list.h + subst_func.h + vector.h + parser.h + matrix.h + buffer.h + log.h + template.h + timer.h + time_interval.h + string_util.h + type_vector_functions.h + ui_return.h + struct_vector.h +) set( test_source test_util.c ) set( test_headers test_util.h ) + +# Add compile time variable values to version.c +if (ERT_WINDOWS) + execute_process(COMMAND cmd.exe /c "echo %date% %time%" OUTPUT_VARIABLE BUILD_TIME ) +else() # Linux or Darwin + execute_process(COMMAND date "+%Y-%m-%d %H:%M:%S" OUTPUT_VARIABLE BUILD_TIME ) +endif() +string(STRIP ${BUILD_TIME} BUILD_TIME) + +find_package(Git) +if(GIT_FOUND) + execute_process( + COMMAND ${GIT_EXECUTABLE} rev-parse HEAD + WORKING_DIRECTORY ${CMAKE_SOURCE_DIR} + OUTPUT_VARIABLE GIT_COMMIT + OUTPUT_STRIP_TRAILING_WHITESPACE + ) + + execute_process( + COMMAND ${GIT_EXECUTABLE} rev-parse --short HEAD + WORKING_DIRECTORY ${CMAKE_SOURCE_DIR} + OUTPUT_VARIABLE GIT_COMMIT_SHORT + OUTPUT_STRIP_TRAILING_WHITESPACE + ) +else() + set( GIT_COMMIT "unknown (git not found!)") + set( GIT_COMMIT_SHORT "unknown (git not found!)") + message( WARNING "Git not found. Build will not contain git revision info." ) +endif() + +set_source_files_properties( version.c PROPERTIES COMPILE_DEFINITIONS "COMPILE_TIME_STAMP=\"${BUILD_TIME}\";GIT_COMMIT=\"${GIT_COMMIT}\";GIT_COMMIT_SHORT=\"${GIT_COMMIT_SHORT}\";ERT_VERSION_MAJOR=\"${ERT_VERSION_MAJOR}\";ERT_VERSION_MINOR=\"${ERT_VERSION_MINOR}\";ERT_VERSION_MICRO=\"${ERT_VERSION_MICRO}\"") + + if (CMAKE_COMPILER_IS_GNUCC) set_property(SOURCE hash.c PROPERTY COMPILE_FLAGS "-Wno-error") endif() diff --git a/ThirdParty/Ert/devel/libert_util/src/block_fs.c b/ThirdParty/Ert/devel/libert_util/src/block_fs.c index 5f2822eb93..0d253e10fc 100644 --- a/ThirdParty/Ert/devel/libert_util/src/block_fs.c +++ b/ThirdParty/Ert/devel/libert_util/src/block_fs.c @@ -163,7 +163,6 @@ struct block_fs_struct { fragmentation_limit == 1.0 : Never rotate. fragmentation_limit == 0.0 : Rotate when one byte is wasted. */ bool data_owner; - time_t index_time; int fsync_interval; /* 0: never n: every nth iteration. */ }; @@ -171,7 +170,7 @@ struct block_fs_struct { static void block_fs_rotate__( block_fs_type * block_fs ); - +UTIL_SAFE_CAST_FUNCTION( block_fs , BLOCK_FS_TYPE_ID ) static inline void fseek__(FILE * stream , long int arg , int whence) { @@ -643,7 +642,13 @@ static void block_fs_reinit( block_fs_type * block_fs ) { -static block_fs_type * block_fs_alloc_empty( const char * mount_file , int block_size , int max_cache_size, float fragmentation_limit, int fsync_interval , bool read_only) { +static block_fs_type * block_fs_alloc_empty( const char * mount_file , + int block_size , + int max_cache_size, + float fragmentation_limit, + int fsync_interval , + bool read_only, + bool use_lockfile) { block_fs_type * block_fs = util_malloc( sizeof * block_fs ); UTIL_TYPE_ID_INIT(block_fs , BLOCK_FS_TYPE_ID); @@ -672,17 +677,23 @@ static block_fs_type * block_fs_alloc_empty( const char * mount_file , int block block_fs->index_file = NULL; block_fs_reinit( block_fs ); - if (read_only) - block_fs->data_owner = false; - else { - block_fs->data_owner = util_try_lockf( block_fs->lock_file , S_IWUSR + S_IWGRP , &block_fs->lock_fd); - block_fs->index_time = time( NULL ); + + { + bool lock_aquired = true; + + if (use_lockfile) { + lock_aquired = util_try_lockf( block_fs->lock_file , S_IWUSR + S_IWGRP , &block_fs->lock_fd); - if (!block_fs->data_owner) - fprintf(stderr," Another program has already opened filesystem read-write - this instance will be UNSYNCRONIZED read-only. Cross your fingers ....\n"); - fflush( stderr ); + if (!lock_aquired) + fprintf(stderr," Another program has already opened filesystem read-write - this instance will be UNSYNCRONIZED read-only. Cross your fingers ....\n"); + } + + if (lock_aquired && (read_only == false)) + block_fs->data_owner = true; + else + block_fs->data_owner = false; + } - return block_fs; } @@ -960,7 +971,6 @@ static void block_fs_build_index( block_fs_type * block_fs , long_vector_type * } } while (file_node != NULL); util_safe_free( filename ); - block_fs->index_time = time( NULL ); } @@ -1043,8 +1053,23 @@ bool block_fs_is_mount( const char * mount_file ) { } +bool block_fs_is_readonly( const block_fs_type * bfs ) { + if (bfs->data_owner) + return false; + else + return true; +} + + -block_fs_type * block_fs_mount( const char * mount_file , int block_size , int max_cache_size , float fragmentation_limit , int fsync_interval , bool preload , bool read_only) { +block_fs_type * block_fs_mount( const char * mount_file , + int block_size , + int max_cache_size , + float fragmentation_limit , + int fsync_interval , + bool preload , + bool read_only, + bool use_lockfile) { block_fs_type * block_fs; { @@ -1053,7 +1078,7 @@ block_fs_type * block_fs_mount( const char * mount_file , int block_size , int m block_fs_fwrite_mount_info__( mount_file , 0 ); { long_vector_type * fix_nodes = long_vector_alloc(0 , 0); - block_fs = block_fs_alloc_empty( mount_file , block_size , max_cache_size , fragmentation_limit , fsync_interval , read_only); + block_fs = block_fs_alloc_empty( mount_file , block_size , max_cache_size , fragmentation_limit , fsync_interval , read_only, use_lockfile); /* We build up the index & free_nodes_list based on the header/index information embedded in the datafile. */ block_fs_open_data( block_fs , false ); if (block_fs->data_stream != NULL) { diff --git a/ThirdParty/Ert/devel/libert_util/src/hash.c b/ThirdParty/Ert/devel/libert_util/src/hash.c index 8e293cc880..a30cd4e97b 100644 --- a/ThirdParty/Ert/devel/libert_util/src/hash.c +++ b/ThirdParty/Ert/devel/libert_util/src/hash.c @@ -189,7 +189,7 @@ static node_data_type * hash_get_node_data(hash_type *hash , const char *key) { void hash_resize(hash_type *hash, int new_size) { hash_sll_type ** new_table = hash_sll_alloc_table( new_size ); hash_node_type * node; - int i; + uint32_t i; for (i=0; i < hash->size; i++) { node = hash_sll_get_head(hash->table[i]); @@ -537,7 +537,7 @@ UTIL_SAFE_CAST_FUNCTION_CONST( hash , HASH_TYPE_ID) UTIL_IS_INSTANCE_FUNCTION(hash , HASH_TYPE_ID) void hash_free(hash_type *hash) { - int i; + uint32_t i; for (i=0; i < hash->size; i++) hash_sll_free(hash->table[i]); free(hash->table); diff --git a/ThirdParty/Ert/devel/libert_util/src/log.c b/ThirdParty/Ert/devel/libert_util/src/log.c index ccb3cabb32..47694d1787 100644 --- a/ThirdParty/Ert/devel/libert_util/src/log.c +++ b/ThirdParty/Ert/devel/libert_util/src/log.c @@ -104,7 +104,7 @@ log_type * log_open( const char * filename , int log_level) { #ifdef HAVE_PTHREAD pthread_mutex_init( &logh->mutex , NULL ); #endif - if (filename != NULL) + if (filename != NULL && log_level > 0) log_reopen( logh , filename); return logh; @@ -112,7 +112,7 @@ log_type * log_open( const char * filename , int log_level) { -static bool log_include_message(const log_type *logh , int message_level) { +bool log_include_message(const log_type *logh , int message_level) { if (message_level <= logh->log_level) return true; else @@ -124,17 +124,18 @@ static bool log_include_message(const log_type *logh , int message_level) { If dup_stream != NULL the message (without the date/time header) is duplicated on this stream. */ void log_add_message(log_type *logh, int message_level , FILE * dup_stream , char* message, bool free_message) { - if (logh->stream == NULL) - util_abort("%s: logh->stream == NULL - must call log_reset_filename() first \n",__func__); + if (log_include_message(logh,message_level)) { + if (logh->stream == NULL) + util_abort("%s: logh->stream == NULL - must call log_reset_filename() first \n",__func__); + #ifdef HAVE_PTHREAD - pthread_mutex_lock( &logh->mutex ); + pthread_mutex_lock( &logh->mutex ); #endif - { - struct tm time_fields; - time_t epoch_time; - - if (log_include_message(logh,message_level)) { + { + struct tm time_fields; + time_t epoch_time; + time(&epoch_time); util_localtime(&epoch_time , &time_fields); @@ -142,19 +143,19 @@ void log_add_message(log_type *logh, int message_level , FILE * dup_stream , cha fprintf(logh->stream,"%02d/%02d - %02d:%02d:%02d %s\n",time_fields.tm_mday, time_fields.tm_mon + 1, time_fields.tm_hour , time_fields.tm_min , time_fields.tm_sec , message); else fprintf(logh->stream,"%02d/%02d - %02d:%02d:%02d \n",time_fields.tm_mday, time_fields.tm_mon + 1, time_fields.tm_hour , time_fields.tm_min , time_fields.tm_sec); - + /** We duplicate the message to the stream 'dup_stream'. */ if ((dup_stream != NULL) && (message != NULL)) fprintf(dup_stream , "%s\n", message); log_sync( logh ); } - } #ifdef HAVE_PTHREAD - pthread_mutex_unlock( &logh->mutex ); + pthread_mutex_unlock( &logh->mutex ); #endif - if (free_message) - free( message ); + if (free_message) + free( message ); + } } diff --git a/ThirdParty/Ert/devel/libert_util/src/matrix.c b/ThirdParty/Ert/devel/libert_util/src/matrix.c index 9f20a19cde..97356ee044 100644 --- a/ThirdParty/Ert/devel/libert_util/src/matrix.c +++ b/ThirdParty/Ert/devel/libert_util/src/matrix.c @@ -19,6 +19,7 @@ #include #include #include +#include #include #include @@ -193,17 +194,20 @@ static matrix_type * matrix_alloc_empty( ) { allocation fails. */ static matrix_type * matrix_alloc_with_stride(int rows , int columns , int row_stride , int column_stride, bool safe_mode) { - matrix_type * matrix = matrix_alloc_empty(); - matrix->data = NULL; - matrix->data_size = 0; - matrix_init_header( matrix , rows , columns , row_stride , column_stride); - matrix->data_owner = true; - matrix_realloc_data__( matrix , safe_mode ); - if (safe_mode) { - if (matrix->data == NULL) { - /* Allocation failed - we return NULL */ - matrix_free(matrix); - matrix = NULL; + matrix_type * matrix = NULL; + if ((rows > 0) && (columns > 0)) { + matrix = matrix_alloc_empty(); + matrix->data = NULL; + matrix->data_size = 0; + matrix_init_header( matrix , rows , columns , row_stride , column_stride); + matrix->data_owner = true; + matrix_realloc_data__( matrix , safe_mode ); + if (safe_mode) { + if (matrix->data == NULL) { + /* Allocation failed - we return NULL */ + matrix_free(matrix); + matrix = NULL; + } } } return matrix; @@ -348,38 +352,41 @@ static bool matrix_resize__(matrix_type * matrix , int rows , int columns , bool if (!matrix->data_owner) util_abort("%s: sorry - can not resize shared matrizes. \n",__func__); { - bool resize_OK = true; - int copy_rows = util_int_min( rows , matrix->rows ); - int copy_columns = util_int_min( columns , matrix->columns); - matrix_type * copy_view = NULL; - matrix_type * copy = NULL; + bool resize_OK = true; - if (copy_content) { - copy_view = matrix_alloc_shared( matrix , 0 , 0 , copy_rows , copy_columns); /* This is the part of the old matrix which should be copied over to the new. */ - copy = matrix_alloc_copy__( copy_view , safe_mode ); /* Now copy contains the part of the old matrix which should be copied over - with private storage. */ - } - { - int old_rows , old_columns, old_row_stride , old_column_stride; - matrix_get_dims( matrix , &old_rows , &old_columns , &old_row_stride , &old_column_stride); /* Storing the old header information - in case the realloc() fails. */ + if ((rows != matrix->rows) || (columns != matrix->columns)) { + int copy_rows = util_int_min( rows , matrix->rows ); + int copy_columns = util_int_min( columns , matrix->columns); + matrix_type * copy_view = NULL; + matrix_type * copy = NULL; - matrix_init_header(matrix , rows , columns , 1 , rows); /* Resetting the header for the matrix */ - matrix_realloc_data__(matrix , safe_mode); - if (matrix->data != NULL) { /* Realloc succeeded */ - if (copy_content) { - matrix_type * target_view = matrix_alloc_shared(matrix , 0 , 0 , copy_rows , copy_columns); - matrix_assign( target_view , copy); - matrix_free( target_view ); + if (copy_content) { + copy_view = matrix_alloc_shared( matrix , 0 , 0 , copy_rows , copy_columns); /* This is the part of the old matrix which should be copied over to the new. */ + copy = matrix_alloc_copy__( copy_view , safe_mode ); /* Now copy contains the part of the old matrix which should be copied over - with private storage. */ + } + { + int old_rows , old_columns, old_row_stride , old_column_stride; + matrix_get_dims( matrix , &old_rows , &old_columns , &old_row_stride , &old_column_stride); /* Storing the old header information - in case the realloc() fails. */ + + matrix_init_header(matrix , rows , columns , 1 , rows); /* Resetting the header for the matrix */ + matrix_realloc_data__(matrix , safe_mode); + if (matrix->data != NULL) { /* Realloc succeeded */ + if (copy_content) { + matrix_type * target_view = matrix_alloc_shared(matrix , 0 , 0 , copy_rows , copy_columns); + matrix_assign( target_view , copy); + matrix_free( target_view ); + } + } else { + /* Failed to realloc new storage; RETURNING AN INVALID MATRIX */ + matrix_init_header(matrix , old_rows , old_columns , old_row_stride , old_column_stride); + resize_OK = false; } - } else { - /* Failed to realloc new storage; RETURNING AN INVALID MATRIX */ - matrix_init_header(matrix , old_rows , old_columns , old_row_stride , old_column_stride); - resize_OK = false; } - } - - if (copy_content) { - matrix_free(copy_view); - matrix_free(copy); + + if (copy_content) { + matrix_free(copy_view); + matrix_free(copy); + } } return resize_OK; } @@ -463,6 +470,21 @@ void matrix_safe_free( matrix_type * matrix ) { } +/*****************************************************************/ +void matrix_pretty_fprint_submat(const matrix_type * matrix , const char * name , const char * fmt , FILE * stream, int m, int M, int n, int N) { + int i,j; + + if (m<0 || m>M || M >= matrix->rows || n<0 || n>N || N >= matrix->columns) + util_abort("%s: matrix:%s not compatible with print subdimensions. \n",__func__ , matrix->name); + + fprintf(stream , "%s =" , name); + for (i=m; i < M; i++) { + fprintf(stream , " ["); + for (j=n; j < N; j++) + fprintf(stream , fmt , matrix_iget(matrix , i,j)); + fprintf(stream , "]\n"); + } +} /*****************************************************************/ void matrix_pretty_fprint(const matrix_type * matrix , const char * name , const char * fmt , FILE * stream) { @@ -501,11 +523,57 @@ void matrix_fprintf( const matrix_type * matrix , const char * fmt , FILE * stre -/* Discard the strides?? */ void matrix_fwrite(const matrix_type * matrix , FILE * stream) { + util_fwrite_int( matrix->rows , stream ); + util_fwrite_int( matrix->columns , stream ); + if (matrix->column_stride == matrix->rows) + util_fwrite( matrix->data , sizeof * matrix->data , matrix->columns * matrix->rows , stream , __func__); + else { + int column; + for (column=0; column < matrix->columns; column++) { + if (matrix->row_stride == 1) { + const double * column_data = &matrix->data[ column * matrix->column_stride ]; + util_fwrite( column_data , sizeof * column_data , matrix->rows , stream , __func__); + } else { + int row; + for (row=0; row < matrix->rows; row++) + util_fwrite_double( matrix->data[ GET_INDEX( matrix , row , column )] , stream); + } + } + } } + +void matrix_fread(matrix_type * matrix , FILE * stream) { + int rows = util_fread_int( stream ); + int columns = util_fread_int( stream ); + + matrix_resize( matrix , rows , columns , false); + if (matrix->column_stride == matrix->rows) + util_fread( matrix->data , sizeof * matrix->data , matrix->columns * matrix->rows , stream , __func__); + else { + int column; + for (column=0; column < matrix->columns; column++) { + if (matrix->row_stride == 1) { + double * column_data = &matrix->data[ column * matrix->column_stride ]; + util_fread( column_data , sizeof * column_data , matrix->rows , stream , __func__); + } else { + int row; + for (row=0; row < matrix->rows; row++) + matrix->data[ GET_INDEX( matrix , row , column )] = util_fread_double( stream ); + } + } + } +} + +matrix_type * matrix_fread_alloc(FILE * stream) { + matrix_type * matrix = matrix_alloc(1,1); + matrix_fread(matrix , stream); + return matrix; +} + + /** [ a11 a12 ] [ a21 a22 ] @@ -685,16 +753,16 @@ void matrix_set_const_row(matrix_type * matrix , const double value , int row) { void matrix_copy_column(matrix_type * target_matrix, const matrix_type * src_matrix , int target_column, int src_column) { matrix_assert_equal_rows( target_matrix , src_matrix ); { - int row; - for(row = 0; row < target_matrix->rows; row++) - target_matrix->data[ GET_INDEX( target_matrix, row , target_column)] = src_matrix->data[ GET_INDEX( src_matrix, row, src_column)]; + int row; + for(row = 0; row < target_matrix->rows; row++) + target_matrix->data[ GET_INDEX( target_matrix, row , target_column)] = src_matrix->data[ GET_INDEX( src_matrix, row, src_column)]; } } void matrix_scale_column(matrix_type * matrix , int column , double scale_factor) { - int row; - for (row = 0; row < matrix->rows; row++) + int row; + for (row = 0; row < matrix->rows; row++) matrix->data[ GET_INDEX( matrix , row , column) ] *= scale_factor; } @@ -707,9 +775,9 @@ void matrix_scale_row(matrix_type * matrix , int row , double scale_factor) { void matrix_copy_row(matrix_type * target_matrix, const matrix_type * src_matrix , int target_row, int src_row) { matrix_assert_equal_columns( target_matrix , src_matrix ); { - int col; - for(col = 0; col < target_matrix->columns; col++) - target_matrix->data[ GET_INDEX( target_matrix , target_row , col)] = src_matrix->data[ GET_INDEX( src_matrix, src_row, col)]; + int col; + for(col = 0; col < target_matrix->columns; col++) + target_matrix->data[ GET_INDEX( target_matrix , target_row , col)] = src_matrix->data[ GET_INDEX( src_matrix, src_row, col)]; } } @@ -1120,8 +1188,8 @@ void matrix_shift_row(matrix_type * matrix , int row , double shift) { */ void matrix_subtract_row_mean(matrix_type * matrix) { - int i; - for ( i=0; i < matrix->rows; i++) { + int i; + for ( i=0; i < matrix->rows; i++) { double row_mean = matrix_get_row_sum(matrix , i) / matrix->columns; matrix_shift_row( matrix , i , -row_mean); } @@ -1138,7 +1206,7 @@ void matrix_subtract_and_store_row_mean(matrix_type * matrix, matrix_type * row_ void matrix_imul_col( matrix_type * matrix , int column , double factor) { int i; - for ( i=0; i < matrix->rows; i++) + for ( i=0; i < matrix->rows; i++) matrix_imul( matrix , i , column , factor ); } @@ -1267,9 +1335,14 @@ bool matrix_equal( const matrix_type * m1 , const matrix_type * m2) { return false; { int i,j; - for (j=0; j < m1->columns; j++) { - for (i=0; i < m1->rows; i++) { - if (memcmp( &m1->data[ GET_INDEX(m1 , i , j)] , &m2->data[ GET_INDEX(m2 , i,j)] , sizeof * m1->data) != 0) + for (i=0; i < m1->rows; i++) { + for (j=0; j < m1->columns; j++) { + int index1 = GET_INDEX(m1 , i , j); + int index2 = GET_INDEX(m2 , i , j); + double d1 = m1->data[ index1 ]; + double d2 = m2->data[ index2 ]; + + if (d1 != d2) return false; } } @@ -1280,6 +1353,22 @@ bool matrix_equal( const matrix_type * m1 , const matrix_type * m2) { } +bool matrix_columns_equal( const matrix_type * m1 , int col1 , const matrix_type * m2 , int col2) { + if (m1->rows != m2->rows) + return false; + + { + int row; + for (row=0; row < m1->rows; row++) { + if (memcmp( &m1->data[ GET_INDEX(m1 , row , col1)] , &m2->data[ GET_INDEX(m2 , row , col2)] , sizeof * m1->data) != 0) + return false; + } + } + + return true; +} + + /*****************************************************************/ /* Various special matrices */ @@ -1445,10 +1534,7 @@ double matrix_diag_std(const matrix_type * Sk,double mean) else{ int nrows = Sk->rows; double std = 0; - int i; - - for ( i=0; idata[GET_INDEX(Sk , i , i)] = Sk->data[GET_INDEX(Sk , i , i)] - mean; + int i; for ( i=0; idata[GET_INDEX(Sk , i , i)] - mean; @@ -1456,7 +1542,7 @@ double matrix_diag_std(const matrix_type * Sk,double mean) } - std = sqrt(std)/nrows; + std = sqrt(std / nrows); return std; } } @@ -1469,6 +1555,20 @@ double matrix_diag_std(const matrix_type * Sk,double mean) LAPACK dependency. */ +double matrix_det2( const matrix_type * A) { + if ((A->rows == 2) && (A->columns == 2)) { + double a00 = A->data[GET_INDEX(A,0,0)]; + double a01 = A->data[GET_INDEX(A,0,1)]; + double a10 = A->data[GET_INDEX(A,1,0)]; + double a11 = A->data[GET_INDEX(A,1,1)]; + + return a00 * a11 - a10 * a01; + } else { + util_abort("%s: hardcoded for 2x2 matrices A is: %d x %d \n",__func__, A->rows , A->columns); + return 0; + } +} + double matrix_det3( const matrix_type * A) { if ((A->rows == 3) && (A->columns == 3)) { double a = A->data[GET_INDEX(A,0,0)]; @@ -1509,11 +1609,45 @@ double matrix_det4( const matrix_type * A) { double a31 = A->data[GET_INDEX(A,3,1)]; double a32 = A->data[GET_INDEX(A,3,2)]; double a33 = A->data[GET_INDEX(A,3,3)]; - + + /* double det = (a00*(a11*(a22*a33 - a23*a32)-a12*(a21*a33 - a23*a31)+a13*(a21*a32 - a22*a31)) - a01*(a10*(a22*a33 - a23*a32)-a12*(a20*a33 - a23*a30)+a13*(a20*a32 - a22*a30)) + a02*(a10*(a21*a33 - a23*a31)-a11*(a20*a33 - a23*a30)+a13*(a20*a31 - a21*a30)) - a03*(a10*(a21*a32 - a22*a31)-a11*(a20*a32 - a22*a30)+a12*(a20*a31 - a21*a30))); + */ + double det = 0; + + { + double factors[24] = { a00*a12*a23*a31, + a00*a13*a21*a32, + a00*a11*a22*a33, + a01*a10*a23*a32, + a01*a12*a20*a33, + a01*a13*a22*a30, + a02*a10*a21*a33, + a02*a11*a23*a30, + a02*a13*a20*a31, + a03*a10*a22*a31, + a03*a11*a20*a32, + a03*a12*a21*a30 + -a02*a13*a21*a30, + -a03*a10*a21*a32, + -a03*a11*a22*a30, + -a03*a12*a20*a31, + -a00*a11*a23*a32, + -a00*a12*a21*a33, + -a00*a13*a22*a31, + -a01*a10*a22*a33, + -a01*a12*a23*a30, + -a01*a13*a20*a32, + -a02*a10*a23*a31, + -a02*a11*a20*a33}; + int i; + + for (i = 0; i < 12; i++) + det += (factors[i] + factors[i + 12]); + } return det; } else { diff --git a/ThirdParty/Ert/devel/libert_util/src/matrix_blas.c b/ThirdParty/Ert/devel/libert_util/src/matrix_blas.c index cc8dbfe1a1..d860151bde 100644 --- a/ThirdParty/Ert/devel/libert_util/src/matrix_blas.c +++ b/ThirdParty/Ert/devel/libert_util/src/matrix_blas.c @@ -181,12 +181,35 @@ void matrix_dgemm(matrix_type *C , const matrix_type *A , const matrix_type * B util_abort("%s: matrix size mismatch between B and C \n",__func__); } + if (!ldc >= util_int_max(1 , m)) { + dgemm_debug(C,A,B,transA , transB); + fprintf(stderr,"Tried to capture blas message: \"** On entry to DGEMM parameter 13 had an illegal value\"\n"); + fprintf(stderr,"m:%d ldc:%d ldc should be >= max(1,%d) \n",m,ldc,m); + util_abort("%s: invalid value for ldc\n",__func__); + } + - dgemm_(&transA_c , &transB_c , &m ,&n , &k , &alpha , matrix_get_data( A ) , &lda , matrix_get_data( B ) , &ldb , &beta , matrix_get_data( C ) , &ldc); + dgemm_(&transA_c , // 1 + &transB_c , // 2 + &m , // 3 + &n , // 4 + &k , // 5 + &alpha , // 6 + matrix_get_data( A ) , // 7 + &lda , // 8 + matrix_get_data( B ) , // 9 + &ldb , // 10 + &beta , // 11 + matrix_get_data( C ) , // 12 + &ldc); // 13 } +void matrix_matmul_with_transpose(matrix_type * C, const matrix_type * A , const matrix_type * B , bool transA , bool transB) { + matrix_dgemm( C , A , B , transA , transB , 1 , 0); +} + /* This function does a general matrix multiply of A * B, and stores diff --git a/ThirdParty/Ert/devel/libert_util/src/parser.c b/ThirdParty/Ert/devel/libert_util/src/parser.c index 353abcaaed..0640dbcbe4 100644 --- a/ThirdParty/Ert/devel/libert_util/src/parser.c +++ b/ThirdParty/Ert/devel/libert_util/src/parser.c @@ -602,7 +602,7 @@ bool parser_fseek_string(const parser_type * parser , FILE * stream , const char bool cont = true; if (strstr( string , parser->comment_start ) != NULL) - util_abort("%s: sorry the string contains a comment start - will never find it ... \n"); /* A bit harsh ?? */ + util_abort("%s: sorry the string contains a comment start - will never find it ... \n",__func__); /* A bit harsh ?? */ do { int c = fgetc( stream ); @@ -661,8 +661,10 @@ bool parser_fseek_string(const parser_type * parser , FILE * stream , const char } while (cont); if (string_found) { - if (!skip_string) - util_fseek(stream , -strlen(string) , SEEK_CUR); /* Reposition to the beginning of 'string' */ + if (!skip_string) { + offset_type offset = (offset_type) strlen( string ); + util_fseek(stream , -offset , SEEK_CUR); /* Reposition to the beginning of 'string' */ + } } else util_fseek(stream , initial_pos , SEEK_SET); /* Could not find the string reposition at initial position. */ } diff --git a/ThirdParty/Ert/devel/libert_util/src/path_stack.c b/ThirdParty/Ert/devel/libert_util/src/path_stack.c index f6190d6d85..f808b0bd1f 100644 --- a/ThirdParty/Ert/devel/libert_util/src/path_stack.c +++ b/ThirdParty/Ert/devel/libert_util/src/path_stack.c @@ -68,6 +68,7 @@ path_stack_type * path_stack_alloc() { void path_stack_free( path_stack_type * path_stack ) { stringlist_free( path_stack->stack ); stringlist_free( path_stack->storage ); + free( path_stack ); } diff --git a/ThirdParty/Ert/devel/libert_util/src/statistics.c b/ThirdParty/Ert/devel/libert_util/src/statistics.c index 3b6f4644e9..cc6734198e 100644 --- a/ThirdParty/Ert/devel/libert_util/src/statistics.c +++ b/ThirdParty/Ert/devel/libert_util/src/statistics.c @@ -34,6 +34,25 @@ double statistics_mean( const double_vector_type * data_vector ) { return sum / size; } + + + +double statistics_std( const double_vector_type * data_vector ) { + const double * data = double_vector_get_const_ptr( data_vector ); + double std = 0; + double mean = statistics_mean( data_vector ); + int size = double_vector_size( data_vector ); + int i; + + for (i=0; i < size; i++) { + double d = (data[i] - mean); + std += d*d; + } + + return sqrt(std / size); +} + + /** diff --git a/ThirdParty/Ert/devel/libert_util/src/stringlist.c b/ThirdParty/Ert/devel/libert_util/src/stringlist.c index 563d38c249..7712a18179 100644 --- a/ThirdParty/Ert/devel/libert_util/src/stringlist.c +++ b/ThirdParty/Ert/devel/libert_util/src/stringlist.c @@ -363,6 +363,20 @@ int stringlist_iget_as_int( const stringlist_type * stringlist , int index , boo return value; } +bool stringlist_iget_as_bool( const stringlist_type * stringlist, int index, bool * valid) { + const char * string_value = stringlist_iget( stringlist, index); + bool value = false; + + if (valid != NULL) + *valid = false; + + if (util_sscanf_bool(string_value , &value)) + if (valid != NULL) + *valid = true; + + return value; +} + const char * stringlist_get_last( const stringlist_type * stringlist ) { return vector_get_last( stringlist->strings ); } diff --git a/ThirdParty/Ert/devel/libert_util/src/struct_vector.c b/ThirdParty/Ert/devel/libert_util/src/struct_vector.c new file mode 100644 index 0000000000..a60dd086b2 --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/src/struct_vector.c @@ -0,0 +1,104 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'struct_vector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include + +#include +#include + + +#define STRUCT_VECTOR_TYPE_ID 772562097 + +struct struct_vector_struct { + UTIL_TYPE_ID_DECLARATION; + int size; + int element_size; + int alloc_size; + + char * data; +}; + +UTIL_IS_INSTANCE_FUNCTION( struct_vector , STRUCT_VECTOR_TYPE_ID) + + +static void struct_vector_resize( struct_vector_type * struct_vector , int new_alloc_size) { + struct_vector->data = util_realloc( struct_vector->data , struct_vector->element_size * new_alloc_size ); + struct_vector->alloc_size = new_alloc_size; +} + + + +struct_vector_type * struct_vector_alloc( int element_size ) { + if (element_size <= 0) { + util_abort("%s: fatal error - can not create container for zero size objects\n",__func__); + return NULL; + } + + { + struct_vector_type * vector = util_malloc( sizeof * vector ); + UTIL_TYPE_ID_INIT( vector , STRUCT_VECTOR_TYPE_ID ); + vector->size = 0; + vector->alloc_size = 0; + vector->element_size = element_size; + vector->data = NULL; + + struct_vector_resize( vector , 10 ); + + return vector; + } +} + +void struct_vector_free( struct_vector_type * struct_vector) { + free( struct_vector->data ); + free( struct_vector ); +} + + +int struct_vector_get_size( const struct_vector_type * struct_vector) { + return struct_vector->size; +} + + + +void struct_vector_append( struct_vector_type * struct_vector , void * value) { + if (struct_vector->size == struct_vector->alloc_size) + struct_vector_resize( struct_vector , 2*struct_vector->alloc_size + 1); + + { + size_t offset = struct_vector->size * struct_vector->element_size; + memcpy( &struct_vector->data[offset] , value , struct_vector->element_size); + struct_vector->size++; + } +} + + + +void struct_vector_iget( const struct_vector_type * struct_vector , int index , void * value) { + if (index < struct_vector->size) { + size_t offset = index * struct_vector->element_size; + memcpy( value , &struct_vector->data[offset] , struct_vector->element_size); + } else + util_abort("%s: fatal error - invalid index:%d size:%d\n",__func__ , index , struct_vector->size); +} + + + +void struct_vector_reset( struct_vector_type * struct_vector ) { + struct_vector->size = 0; +} diff --git a/ThirdParty/Ert/devel/libert_util/src/subst_list.c b/ThirdParty/Ert/devel/libert_util/src/subst_list.c index 577f772968..a563980a90 100644 --- a/ThirdParty/Ert/devel/libert_util/src/subst_list.c +++ b/ThirdParty/Ert/devel/libert_util/src/subst_list.c @@ -231,7 +231,8 @@ static subst_list_string_type * subst_list_insert_new_node(subst_list_type * sub vector_append_owned_ref( subst_list->string_data , new_node , subst_list_string_free__ ); else vector_insert_owned_ref( subst_list->string_data , 0 , new_node , subst_list_string_free__ ); - + + hash_insert_ref( subst_list->map , key , new_node ); return new_node; } @@ -260,6 +261,11 @@ const subst_list_type * subst_list_get_parent( const subst_list_type * subst_lis } +bool subst_list_has_key( const subst_list_type * subst_list , const char * key) { + return hash_has_key( subst_list->map , key ); +} + + /* The input argument is currently only (void *), runtime it will be checked whether it is of type subst_list_type, in which case it is @@ -669,7 +675,7 @@ bool subst_list_filter_file(const subst_list_type * subst_list , const char * sr remove( backup_file ); free( backup_file ); } - free(buffer); + buffer_free( buffer ); return match; } @@ -813,6 +819,12 @@ const char * subst_list_iget_value( const subst_list_type * subst_list , int ind } } +const char * subst_list_get_value( subst_list_type * subst_list , const char * key) { + const subst_list_string_type * node = hash_get( subst_list->map , key ); + return node->value; +} + + const char * subst_list_iget_doc_string( const subst_list_type * subst_list , int index) { if (index < vector_get_size(subst_list->string_data)) { diff --git a/ThirdParty/Ert/devel/libert_util/src/test_util.c b/ThirdParty/Ert/devel/libert_util/src/test_util.c index e89fefdffd..197c588fb9 100644 --- a/ThirdParty/Ert/devel/libert_util/src/test_util.c +++ b/ThirdParty/Ert/devel/libert_util/src/test_util.c @@ -78,6 +78,13 @@ void test_assert_string_equal__( const char * s1 , const char * s2 , const char } +void test_assert_string_not_equal__( const char * s1 , const char * s2 , const char * file, int line) { + bool equal = test_check_string_equal( s1 , s2 ); + if (equal) + test_error_exit( "%s:%d => String are equal s1:[%s] s2:[%s]\n" , file , line , s1 , s2 ); +} + + void test_assert_int_equal__( int i1 , int i2 , const char * file , int line) { if (i1 != i2) @@ -210,6 +217,24 @@ void test_assert_double_not_equal__( double d1 , double d2, const char * file , test_error_exit( "%s:%d => double values:%15.12g %15.12g are equal.\n" , file , line , d1 , d2); } +bool test_check_float_equal( float d1 , float d2) { + const float tolerance = 1e-4; + return util_float_approx_equal__( d1 , d2 , tolerance ); +} + + +void test_assert_float_equal__( float d1 , float d2, const char * file , int line) { + if (!test_check_float_equal(d1 , d2)) + test_error_exit( "%s:%d => float values:%g %g are not sufficiently similar\n" , file , line , d1 , d2); +} + + +void test_assert_float_not_equal__( float d1 , float d2, const char * file , int line) { + if (test_check_float_equal(d1 , d2)) + test_error_exit( "%s:%d => float values:%15.12g %15.12g are equal.\n" , file , line , d1 , d2); +} + + /*****************************************************************/ void test_install_SIGNALS(void) { @@ -244,4 +269,27 @@ void test_util_addr2line() { test_assert_string_equal( file_name , file ); } + +void test_assert_util_abort(const char * function_name , void call_func (void *) , void * arg) { + bool util_abort_intercepted = false; + + { + jmp_buf * context = util_abort_test_jump_buffer(); + util_abort_test_set_intercept_function( function_name ); + + if (setjmp(*context) == 0) + call_func( arg ); + else + util_abort_intercepted = true; + + util_abort_test_set_intercept_function( NULL ); + } + + if (!util_abort_intercepted) { + fprintf(stderr,"Expected call to util_abort() from:%s missing \n",function_name); + test_assert_true( util_abort_intercepted ); + } +} + + #endif diff --git a/ThirdParty/Ert/devel/libert_util/src/util.c b/ThirdParty/Ert/devel/libert_util/src/util.c index 09e91fbaa0..4a20f675a2 100644 --- a/ThirdParty/Ert/devel/libert_util/src/util.c +++ b/ThirdParty/Ert/devel/libert_util/src/util.c @@ -290,6 +290,16 @@ static bool EOL_CHAR(char c) { #undef strncpy // This is for some reason needed in RH3 +/* + The difference between /dev/random and /dev/urandom is that the + former will block if the entropy pool is close to empty: + + util_fread_dev_random() : The 'best' quality random numbers, but + runtime can be quite long. + + util_fread_dev_urandom(): Potentially lower quality random + numbers, but deterministic runtime. +*/ void util_fread_dev_random(int buffer_size , char * buffer) { FILE * stream = util_fopen("/dev/random" , "r"); @@ -353,6 +363,21 @@ double util_kahan_sum(const double *data, size_t N) { } +bool util_float_approx_equal__( float d1 , float d2, float epsilon) { + if (d1 == d2) + return true; + else { + float diff = fabs(d1 - d2); + float sum = fabs(d1) + fabs(d2); + + if ((diff / sum) < epsilon) + return true; + else + return false; + } +} + + bool util_double_approx_equal__( double d1 , double d2, double epsilon) { if (d1 == d2) return true; @@ -533,8 +558,10 @@ bool util_fseek_string(FILE * stream , const char * __string , bool skip_string if (string_found) { - if (!skip_string) - util_fseek(stream , -strlen(string) , SEEK_CUR); /* Reposition to the beginning of 'string' */ + if (!skip_string) { + offset_type offset = (offset_type) strlen(string); + util_fseek(stream , -offset , SEEK_CUR); /* Reposition to the beginning of 'string' */ + } } else util_fseek(stream , initial_pos , SEEK_SET); /* Could not find the string reposition at initial position. */ @@ -2168,8 +2195,7 @@ char * util_fread_alloc_file_content(const char * filename , int * buffer_size) */ -bool util_copy_stream(FILE *src_stream , FILE *target_stream , int buffer_size , void * buffer , bool abort_on_error) { - +bool util_copy_stream(FILE *src_stream , FILE *target_stream , size_t buffer_size , void * buffer , bool abort_on_error) { while ( ! feof(src_stream)) { int bytes_read; int bytes_written; @@ -2195,7 +2221,7 @@ bool util_copy_stream(FILE *src_stream , FILE *target_stream , int buffer_size , } -static bool util_copy_file__(const char * src_file , const char * target_file, int buffer_size , void * buffer , bool abort_on_error) { +static bool util_copy_file__(const char * src_file , const char * target_file, size_t buffer_size , void * buffer , bool abort_on_error) { if (util_same_file(src_file , target_file)) { fprintf(stderr,"%s Warning: trying to copy %s onto itself - nothing done\n",__func__ , src_file); return false; @@ -2207,6 +2233,18 @@ static bool util_copy_file__(const char * src_file , const char * target_file, i fclose(src_stream); fclose(target_stream); + +#ifdef HAVE_CHMOD_AND_MODE_T + { + struct stat stat_buffer; + mode_t src_mode; + + stat( src_file , &stat_buffer ); + src_mode = stat_buffer.st_mode; + chmod( target_file , src_mode ); + } +#endif + return result; } } @@ -2421,7 +2459,7 @@ bool util_file_exists(const char *filename) { bool util_entry_exists( const char * entry ) { stat_type stat_buffer; int stat_return = util_stat(entry, &stat_buffer); - if (stat_return == 0) + if (stat_return == 0) return true; else { if (errno == ENOENT) @@ -3030,6 +3068,19 @@ bool util_sscanf_date(const char * date_token , time_t * t) { } +bool util_sscanf_percent(const char * percent_token, double * value) { + char * percent_ptr; + + double double_val = strtod( percent_token, &percent_ptr); + + if (0 == strcmp(percent_ptr, "%")) { + *value = double_val; + return true; + } else + return false; +} + + bool util_fscanf_date(FILE *stream , time_t *t) { int init_pos = util_ftell(stream); char * date_token = util_fscanf_alloc_token(stream); @@ -4044,7 +4095,7 @@ void util_float_to_double(double *double_ptr , const float *float_ptr , int size void util_double_to_float(float *float_ptr , const double *double_ptr , int size) { int i; for (i=0; i < size; i++) - float_ptr[i] = double_ptr[i]; + float_ptr[i] = (float) double_ptr[i]; } @@ -4759,10 +4810,20 @@ char * util_realloc_sprintf(char * s , const char * fmt , ...) { void util_abort_signal(int signal) { - util_abort("Program recieved signal:%d\n" , signal); + util_abort("Program received signal:%d\n" , signal); } +void util_install_signals(void) { + signal(SIGSEGV , util_abort_signal); /* Segmentation violation, i.e. overwriting memory ... */ + signal(SIGTERM , util_abort_signal); /* If killing the enkf program with SIGTERM (the default kill signal) you will get a backtrace. + Killing with SIGKILL (-9) will not give a backtrace.*/ + signal(SIGABRT , util_abort_signal); /* Signal abort. */ + signal(SIGILL , util_abort_signal); /* Signal illegal instruction. */ +} + + + void util_exit(const char * fmt , ...) { va_list ap; va_start(ap , fmt); @@ -4991,6 +5052,7 @@ char * util_alloc_link_target(const char * link) { #ifdef HAVE_UTIL_ABORT +#include "util_abort_test.c" #include "util_abort_gnu.c" #else #include "util_abort_simple.c" diff --git a/ThirdParty/Ert/devel/libert_util/src/util_abort_gnu.c b/ThirdParty/Ert/devel/libert_util/src/util_abort_gnu.c index 9e3f7116bb..014869060a 100644 --- a/ThirdParty/Ert/devel/libert_util/src/util_abort_gnu.c +++ b/ThirdParty/Ert/devel/libert_util/src/util_abort_gnu.c @@ -49,7 +49,9 @@ static bool util_addr2line_lookup__(const void * bt_addr , char ** func_name , c { bool address_found = false; Dl_info dl_info; - +#if defined(__APPLE__) + return false; +#else if (dladdr(bt_addr , &dl_info)) { const char * executable = dl_info.dli_fname; *func_name = util_alloc_string_copy( dl_info.dli_sname ); @@ -94,6 +96,7 @@ static bool util_addr2line_lookup__(const void * bt_addr , char ** func_name , c } } return address_found; +#endif } } @@ -187,23 +190,34 @@ static void util_fprintf_backtrace(FILE * stream) { char * util_alloc_dump_filename() { time_t timestamp = time(NULL); - struct tm *converted = localtime(×tamp); char day[32]; - size_t last = strftime(day, 32, "%Y%m%d-%H%M%S", converted); - day[last] = '\0'; + strftime(day, 32, "%Y%m%d-%H%M%S", localtime(×tamp)); + { + uid_t uid = getuid(); + struct passwd *pwd = getpwuid(uid); + char * filename; + + if (pwd) + filename = util_alloc_sprintf("/tmp/ert_abort_dump.%s.%s.log", pwd->pw_name, day); + else + filename = util_alloc_sprintf("/tmp/ert_abort_dump.%d.%s.log", uid , day); - struct passwd *pwd = getpwuid(getuid()); - char * filename = util_alloc_sprintf("/tmp/ert_abort_dump.%s.%s.log", pwd->pw_name, day); - return filename; + return filename; + } } -void util_abort(const char * fmt , ...) { + +void util_abort__(const char * file , const char * function , int line , const char * fmt , ...) { + util_abort_test_intercept( function ); pthread_mutex_lock( &__abort_mutex ); /* Abort before unlock() */ { - char * filename = util_alloc_dump_filename(); + char * filename = NULL; FILE * abort_dump = NULL; if (!getenv("ERT_SHOW_BACKTRACE")) + filename = util_alloc_dump_filename(); + + if (filename) abort_dump = fopen(filename, "w"); if (abort_dump == NULL) @@ -213,6 +227,7 @@ void util_abort(const char * fmt , ...) { va_start(ap , fmt); fprintf(abort_dump , "\n\n"); + fprintf(abort_dump , "Abort called from: %s (%s:%d) \n",function , file , line); vfprintf(abort_dump , fmt , ap); fprintf(abort_dump , "\n\n"); va_end(ap); diff --git a/ThirdParty/Ert/devel/libert_util/src/util_abort_simple.c b/ThirdParty/Ert/devel/libert_util/src/util_abort_simple.c index ffe4203004..889987eb7d 100644 --- a/ThirdParty/Ert/devel/libert_util/src/util_abort_simple.c +++ b/ThirdParty/Ert/devel/libert_util/src/util_abort_simple.c @@ -10,12 +10,13 @@ -void util_abort(const char * fmt , ...) { +void util_abort__(const char * file , const char * function , int line , const char * fmt , ...) { fprintf(stderr,"\n-----------------------------------------------------------------\n"); fprintf(stderr,"A fatal error has been detected and the program will abort.\n\n"); fprintf(stderr, "Current executable : %s\n" , (__current_executable == NULL) ? "" : __current_executable); fprintf(stderr, "Version info : %s\n" , (__abort_program_message == NULL) ? "" : __abort_program_message); fprintf(stderr, "\nError message: "); + fprintf(stderr , "Abort called from: %s (%s:%d) \n",function , file , line); { va_list ap; va_start(ap , fmt); diff --git a/ThirdParty/Ert/devel/libert_util/src/util_abort_test.c b/ThirdParty/Ert/devel/libert_util/src/util_abort_test.c new file mode 100644 index 0000000000..cf6f37984d --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/src/util_abort_test.c @@ -0,0 +1,21 @@ +#include + +static jmp_buf jump_buffer; +static char * intercept_function = NULL; + + +jmp_buf * util_abort_test_jump_buffer() { + return &jump_buffer; +} + +void util_abort_test_set_intercept_function(const char * function) { + intercept_function = util_realloc_string_copy( intercept_function , function ); +} + + +void util_abort_test_intercept( const char * function ) { + if (intercept_function && (strcmp(function , intercept_function) == 0)) { + longjmp(jump_buffer , 0 ); + } +} + diff --git a/ThirdParty/Ert/devel/libert_util/src/util_lockf.c b/ThirdParty/Ert/devel/libert_util/src/util_lockf.c index b241238a59..c2ab45524e 100644 --- a/ThirdParty/Ert/devel/libert_util/src/util_lockf.c +++ b/ThirdParty/Ert/devel/libert_util/src/util_lockf.c @@ -21,6 +21,11 @@ ** Observe that with this locking scheme the existence of a lockfile ** is not really interesting. + + Observe that the lockf() system call, which this function is based + on, will always succeed in the same process. I.e. this function + can NOT be used to protect against concurrent update from two + threads in the same process. */ diff --git a/ThirdParty/Ert/devel/libert_util/src/vector.c b/ThirdParty/Ert/devel/libert_util/src/vector.c index 63ae3a0c4c..66e0032151 100644 --- a/ThirdParty/Ert/devel/libert_util/src/vector.c +++ b/ThirdParty/Ert/devel/libert_util/src/vector.c @@ -277,7 +277,7 @@ int vector_append_copy(vector_type * vector , const void * data , copyc_ftype * void vector_push_copy(vector_type * vector , const void * data , copyc_ftype * copyc , free_ftype * del) { node_data_type * node = node_data_alloc_ptr( data, copyc , del); - return vector_push_node(vector , node); + vector_push_node(vector , node); } diff --git a/ThirdParty/Ert/devel/libert_util/src/vector_template.c b/ThirdParty/Ert/devel/libert_util/src/vector_template.c index 57fde975be..9f6faf5b8a 100644 --- a/ThirdParty/Ert/devel/libert_util/src/vector_template.c +++ b/ThirdParty/Ert/devel/libert_util/src/vector_template.c @@ -132,7 +132,7 @@ typedef struct { } sort_node_type; -static UTIL_SAFE_CAST_FUNCTION(@TYPE@_vector , TYPE_VECTOR_ID); +UTIL_SAFE_CAST_FUNCTION(@TYPE@_vector , TYPE_VECTOR_ID); UTIL_IS_INSTANCE_FUNCTION(@TYPE@_vector , TYPE_VECTOR_ID); @@ -157,20 +157,20 @@ static void @TYPE@_vector_realloc_data__(@TYPE@_vector_type * vector , int new_a } -static void @TYPE@_vector_memmove(@TYPE@_vector_type * vector , int offset , int count) { - if ((count + offset) < 0) - util_abort("%s: offset:%d left_shift:%d - invalid \n",__func__ , offset , -count); - - if ((count + vector->size > vector->alloc_size)) - @TYPE@_vector_realloc_data__( vector , util_int_min( 2*vector->alloc_size , count + vector->size )); +static void @TYPE@_vector_memmove(@TYPE@_vector_type * vector , int offset , int shift) { + if ((shift + offset) < 0) + util_abort("%s: offset:%d left_shift:%d - invalid \n",__func__ , offset , -shift); + + if ((shift + vector->size > vector->alloc_size)) + @TYPE@_vector_realloc_data__( vector , util_int_min( 2*vector->alloc_size , shift + vector->size )); { - int block_size = abs(count) * sizeof(@TYPE@); - @TYPE@ * target = &vector->data[offset + count]; + size_t move_size = (vector->size - offset) * sizeof(@TYPE@); + @TYPE@ * target = &vector->data[offset + shift]; const @TYPE@ * src = &vector->data[offset]; - memmove( target , src , block_size ); + memmove( target , src , move_size ); - vector->size += count; + vector->size += shift; } } @@ -247,14 +247,16 @@ static @TYPE@_vector_type * @TYPE@_vector_alloc__(int init_size , @TYPE@ default /** - This function will change the size of the storage area of the - vector to become @new_alloc_size elements. If @new_alloc_size is - less than the current size of the vector, the last elements will be - lost. + new_size < current_size: The trailing elements will be lost + + new_size > current_size: The vector will grow by adding default elements at the end. */ -void @TYPE@_vector_resize( @TYPE@_vector_type * vector , int new_alloc_size ) { - @TYPE@_vector_realloc_data__( vector , new_alloc_size ); +void @TYPE@_vector_resize( @TYPE@_vector_type * vector , int new_size ) { + if (new_size <= vector->size) + vector->size = new_size; + else + @TYPE@_vector_iset( vector , new_size - 1 , vector->default_value); } @@ -336,6 +338,13 @@ void @TYPE@_vector_memcpy_data_block( @TYPE@_vector_type * target , const @TYPE@ +void @TYPE@_vector_memcpy_from_data( @TYPE@_vector_type * target , const @TYPE@ * src , int src_size ) { + @TYPE@_vector_reset( target ); + @TYPE@_vector_iset( target , src_size - 1 , 0 ); + memcpy( target->data , src , src_size * sizeof * target->data ); +} + + void @TYPE@_vector_memcpy_data( @TYPE@ * target, const @TYPE@_vector_type * src ) { memcpy( target , src->data , src->size * sizeof * src->data ); } @@ -526,6 +535,18 @@ void @TYPE@_vector_inplace_add( @TYPE@_vector_type * vector , const @TYPE@_vecto } } +/* vector - vector */ +void @TYPE@_vector_inplace_sub( @TYPE@_vector_type * vector , const @TYPE@_vector_type * delta) { + if (vector->size != delta->size) + util_abort("%s: combining vectors with different size: %d and %d \n",__func__ , vector->size , delta->size); + { + int i; + for (i=0; i < vector->size; i++) + vector->data[i] -= delta->data[i]; + } +} + + /* vector * vector (elementwise) */ void @TYPE@_vector_inplace_mul( @TYPE@_vector_type * vector , const @TYPE@_vector_type * factor) { if (vector->size != factor->size) @@ -606,6 +627,19 @@ void @TYPE@_vector_iset(@TYPE@_vector_type * vector , int index , @TYPE@ value) } } +/* + The block_size can be negative, in which case the loop will walk to + the left in the vector. +*/ + +void @TYPE@_vector_iset_block(@TYPE@_vector_type * vector , int index , int block_size , @TYPE@ value) { + int sign = (block_size > 0) ? 1 : -1 ; + int c; + for (c=0; c < abs(block_size); c++) + @TYPE@_vector_iset( vector , index + c * sign , value); +} + + /** This function invokes _iset - i.e. growing the vector if needed. If the index is not currently set, the default value will be used. @@ -659,6 +693,30 @@ void @TYPE@_vector_idel_block( @TYPE@_vector_type * vector , int index , int blo } + +/** + Removes all occurences of @value from the vector, thereby shrinking + the vector. The return value is the number of elements removed from + the vector. +*/ + +@TYPE@ @TYPE@_vector_del_value( @TYPE@_vector_type * vector , @TYPE@ del_value) { + int index = 0; + int del_count = 0; + while (true) { + if (index == vector->size) + break; + + if (@TYPE@_vector_iget( vector , index) == del_value) { + @TYPE@_vector_idel( vector , index); + del_count++; + } else + index++; + } + return del_count; +} + + void @TYPE@_vector_insert( @TYPE@_vector_type * vector , int index , @TYPE@ value) { if (index >= vector->size) @TYPE@_vector_iset( vector , index , value ); @@ -735,6 +793,21 @@ int @TYPE@_vector_size(const @TYPE@_vector_type * vector) { } +void @TYPE@_vector_rshift(@TYPE@_vector_type * vector , int shift) { + if (shift < 0) + @TYPE@_vector_memmove( vector , -shift , shift); + else { + int i; + @TYPE@_vector_memmove( vector , 0 , shift); + for (i=0; i < shift; i++) + vector->data[i] = vector->default_value; + } +} + +void @TYPE@_vector_lshift(@TYPE@_vector_type * vector , int shift) { + @TYPE@_vector_rshift( vector , -shift); +} + @TYPE@ * @TYPE@_vector_get_ptr(const @TYPE@_vector_type * vector) { @TYPE@_vector_assert_writable( vector ); @@ -947,6 +1020,20 @@ int @TYPE@_vector_index(const @TYPE@_vector_type * vector , @TYPE@ value) { return -1; } +bool @TYPE@_vector_contains(const @TYPE@_vector_type * vector , @TYPE@ value) { + if (@TYPE@_vector_index( vector , value) >= 0) + return true; + else + return false; +} + + +bool @TYPE@_vector_contains_sorted(const @TYPE@_vector_type * vector , @TYPE@ value) { + if (@TYPE@_vector_index_sorted( vector , value) >= 0) + return true; + else + return false; +} /* @@ -1359,7 +1446,7 @@ void @TYPE@_vector_buffer_fread(@TYPE@_vector_type * vector , buffer_type * buff buffer_fread( buffer , &default_value , sizeof default_value , 1 ); @TYPE@_vector_set_default( vector , default_value ); - @TYPE@_vector_resize( vector , size ); + @TYPE@_vector_realloc_data__( vector , size ); buffer_fread( buffer , vector->data , sizeof * vector->data , size ); vector->size = size; } @@ -1406,7 +1493,29 @@ int @TYPE@_vector_count_equal( const @TYPE@_vector_type * vector , @TYPE@ cmp_va } +/* + The upper limit is inclusive - if it is commensurable with the + delta. +*/ +void @TYPE@_vector_range_fill(@TYPE@_vector_type * vector , @TYPE@ limit1 , @TYPE@ delta , @TYPE@ limit2) { + @TYPE@ current_value = limit1; + + if (delta == 0) + util_abort("%s: sorry can not have delta == 0 \n",__func__); + + @TYPE@_vector_reset( vector ); + while (true) { + @TYPE@_vector_append( vector , current_value ); + current_value += delta; + if (delta > 0 && current_value > limit2) + break; + + if (delta < 0 && current_value < limit2) + break; + } +} + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libert_util/src/version.c b/ThirdParty/Ert/devel/libert_util/src/version.c new file mode 100644 index 0000000000..c17675eb97 --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/src/version.c @@ -0,0 +1,42 @@ +#define DOT "." + +#ifdef ERT_VERSION_MAJOR +#ifdef ERT_VERSION_MINOR +#ifdef ERT_VERSION_MICRO + #define ERT_VERSION ERT_VERSION_MAJOR DOT ERT_VERSION_MINOR DOT ERT_VERSION_MICRO +#endif +#endif +#endif + + +char* version_get_git_commit() { + #ifdef GIT_COMMIT + return GIT_COMMIT; + #else + return "Unknown git commit hash"; + #endif +} + +char* version_get_git_commit_short() { + #ifdef GIT_COMMIT_SHORT + return GIT_COMMIT_SHORT; + #else + return "Unknown git short commit hash"; + #endif +} + +char* version_get_ert_version() { + #ifdef ERT_VERSION + return ERT_VERSION; + #else + return "Unknown version"; + #endif +} + +char* version_get_build_time() { + #ifdef COMPILE_TIME_STAMP + return COMPILE_TIME_STAMP; + #else + return "Unknown build time"; + #endif +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libert_util/tests/CMakeLists.txt index 18213a6eef..96076ad251 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libert_util/tests/CMakeLists.txt @@ -18,10 +18,26 @@ add_executable( ert_util_matrix ert_util_matrix.c ) target_link_libraries( ert_util_matrix ert_util test_util ) add_test( ert_util_matrix ${EXECUTABLE_OUTPUT_PATH}/ert_util_matrix ) +add_executable( ert_util_statistics ert_util_statistics.c ) +target_link_libraries( ert_util_statistics ert_util test_util ) +add_test( ert_util_statistics ${EXECUTABLE_OUTPUT_PATH}/ert_util_statistics ) + +add_executable( ert_util_struct_vector ert_util_struct_vector.c ) +target_link_libraries( ert_util_struct_vector ert_util test_util ) +add_test( ert_util_struct_vector ${EXECUTABLE_OUTPUT_PATH}/ert_util_struct_vector ) + +add_executable( ert_util_copy_file ert_util_copy_file.c ) +target_link_libraries( ert_util_copy_file ert_util test_util ) +add_test( ert_util_copy_file ${EXECUTABLE_OUTPUT_PATH}/ert_util_copy_file ${EXECUTABLE_OUTPUT_PATH}/ert_util_copy_file ) + add_executable( ert_util_filename ert_util_filename.c ) target_link_libraries( ert_util_filename ert_util test_util ) add_test( ert_util_filename ${EXECUTABLE_OUTPUT_PATH}/ert_util_filename ) +add_executable( ert_util_sscan_test ert_util_sscan_test.c ) +target_link_libraries( ert_util_sscan_test ert_util test_util ) +add_test( ert_util_sscan_test ${EXECUTABLE_OUTPUT_PATH}/ert_util_sscan_test ) + add_executable( ert_util_string_util ert_util_string_util.c ) target_link_libraries( ert_util_string_util ert_util test_util ) add_test( ert_util_string_util ${EXECUTABLE_OUTPUT_PATH}/ert_util_string_util ) @@ -147,3 +163,9 @@ add_test( ert_util_arg_pack ${EXECUTABLE_OUTPUT_PATH}/ert_util_arg_pack) add_executable( ert_util_abort_gnu_tests ert_util_abort_gnu_tests.c) target_link_libraries( ert_util_abort_gnu_tests ert_util test_util) add_test( ert_util_abort_gnu_tests ${EXECUTABLE_OUTPUT_PATH}/ert_util_abort_gnu_tests) + +if (WITH_PTHREAD) + add_executable( ert_util_block_fs ert_util_block_fs.c) + target_link_libraries( ert_util_block_fs ert_util test_util) + add_test( ert_util_block_fs ${EXECUTABLE_OUTPUT_PATH}/ert_util_block_fs) +endif() diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_abort_gnu_tests.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_abort_gnu_tests.c index 1df5627438..06699a93d0 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/ert_util_abort_gnu_tests.c +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_abort_gnu_tests.c @@ -6,39 +6,21 @@ */ #include -#include -#include #include -#include -#include -#include - #include #include -/* - * - */ -int main(int argc, char** argv) { - - char * filename = util_alloc_dump_filename(); - unsetenv( "ERT_SHOW_BACKTRACE"); - if (util_file_exists(filename)) { - remove(filename); - } - - test_assert_false(util_file_exists(filename)); - pid_t child_pid = fork(); +void call_util_abort(void * arg) { + util_abort("%s: I am calling util_abort - should be intercepted\n",__func__ ); +} - if (child_pid == 0) { - util_abort("I was terminated with the util_abort function"); - } else { - waitpid(child_pid, NULL, 0); - test_assert_true(util_file_exists(filename)); - free(filename); - } +void test_intercept() { + test_assert_util_abort( "call_util_abort" , call_util_abort , NULL ); +} - return (EXIT_SUCCESS); +int main(int argc, char** argv) { + test_intercept(); + exit(0); } diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_block_fs.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_block_fs.c new file mode 100644 index 0000000000..d399d00a81 --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_block_fs.c @@ -0,0 +1,107 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_util_block_fs.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + + +#include +#include +#include + + +void violating_fwrite( void * arg ) { + block_fs_type * bfs = block_fs_safe_cast( arg ); + block_fs_fwrite_file( bfs , "name" , NULL , 100 ); +} + + +void test_readonly( ) { + test_work_area_type * work_area = test_work_area_alloc("block_fs/read_only"); + block_fs_type * bfs = block_fs_mount( "test.mnt" , 1000 , 10000 , 0.67 , 10 , true , true , false ); + test_assert_true( block_fs_is_readonly( bfs )); + test_assert_util_abort("block_fs_aquire_wlock" , violating_fwrite , bfs ); + block_fs_close(bfs , true); + test_work_area_free( work_area ); +} + + +void createFS1() { + pid_t pid = fork(); + + if (pid == 0) { + block_fs_type * bfs = block_fs_mount( "test.mnt" , 1000 , 10000 , 0.67 , 10 , true , false , true ); + test_assert_false( block_fs_is_readonly( bfs ) ); + test_assert_true( util_file_exists("test.lock_0")); + { + int total_sleep = 0; + while (true) { + if (util_file_exists( "stop")) { + unlink("stop"); + break; + } + + usleep(1000); + total_sleep += 1000; + if (total_sleep > 1000000 * 5) { + fprintf(stderr,"Test failure - never receieved \"stop\" file from parent process \n"); + break; + } + } + } + block_fs_close( bfs , false ); + exit(0); + } + usleep(10000); +} + + + +void test_lock_conflict() { + test_work_area_type * work_area = test_work_area_alloc("block_fs/lock_conflict"); + createFS1(); + while (true) { + if (util_file_exists("test.lock_0")) + break; + } + + { + block_fs_type * bfs = block_fs_mount( "test.mnt" , 1000 , 10000 , 0.67 , 10 , true , false , true ); + test_assert_true( block_fs_is_readonly( bfs ) ); + } + { + FILE * stream = util_fopen("stop" , "w"); + fclose( stream ); + } + + while (util_file_exists( "stop")) { + usleep( 1000 ); + } + + test_work_area_free( work_area ); +} + + + + +int main(int argc , char ** argv) { + test_readonly(); + test_lock_conflict(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_copy_file.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_copy_file.c new file mode 100644 index 0000000000..4a67959a9b --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_copy_file.c @@ -0,0 +1,58 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'enkf_util_copy_file.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include +#include +#include + +#include +#include + +#include +#include + + + +void test_copy_file( const char * executable ) { + struct stat stat_buf; + mode_t mode0,mode1; + stat( executable , &stat_buf ); + + mode0 = stat_buf.st_mode; + { + test_work_area_type * test_area = test_work_area_alloc( "executable-copy" ); + + util_copy_file( executable , "test.x"); + test_assert_true( util_file_exists( "test.x" )); + stat( "test.x" , &stat_buf ); + mode1 = stat_buf.st_mode; + + test_assert_true( mode0 == mode1 ); + test_work_area_free( test_area ); + } +} + + + +int main(int argc , char ** argv) { + const char * executable = argv[1]; + test_copy_file( executable ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_logh.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_logh.c index 9bc104d885..d91eef952d 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/ert_util_logh.c +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_logh.c @@ -39,9 +39,16 @@ int main(int argc , char ** argv) { { log_type * logh = log_open( LOG_FILE , 0 ); + test_assert_not_NULL(logh); + log_close( logh ); + } + + { + log_type * logh = log_open( LOG_FILE , 1 ); test_assert_true( log_is_open( logh )); log_close( logh ); } + test_work_area_free( work_area ); exit(0); } diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_matrix.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_matrix.c index f3ac1ba22b..9bf1c1e0af 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/ert_util_matrix.c +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_matrix.c @@ -19,21 +19,215 @@ #include +#include #include +#include +#include #include +#include +#include +#include -int main( int argc , char ** argv) { +void test_resize() { + matrix_type * m1 = matrix_alloc(5,5); + matrix_type * m2 = matrix_alloc(5,5); + rng_type * rng = rng_alloc( MZRAN , INIT_DEFAULT ); + + matrix_random_init( m1 , rng ); + matrix_assign( m2 , m1 ); + + test_assert_true( matrix_equal( m1 , m2 )); + matrix_resize( m1 , 5 , 5 , false ); + test_assert_true( matrix_equal( m1 , m2 )); + matrix_resize( m1 , 5 , 5 , true ); + test_assert_true( matrix_equal( m1 , m2 )); + + rng_free( rng ); + matrix_free( m1 ); + matrix_free( m2 ); +} + + +void test_column_equal() { + matrix_type * m1 = matrix_alloc(5,5); + matrix_type * m2 = matrix_alloc(5,5); + matrix_type * m3 = matrix_alloc(6,5); + rng_type * rng = rng_alloc( MZRAN , INIT_DEFAULT ); + + matrix_random_init( m1 , rng ); + matrix_assign( m2 , m1 ); + + test_assert_true( matrix_columns_equal( m1 , 2 , m2 , 2 )); + test_assert_false( matrix_columns_equal( m1 , 2 , m2 , 3 )); + test_assert_false( matrix_columns_equal( m1 , 2 , m3 , 3 )); + + rng_free( rng ); + matrix_free( m1 ); + matrix_free( m2 ); + matrix_free( m3 ); +} + + + + +void test_create_invalid() { + test_assert_NULL( matrix_alloc(0, 100)); + test_assert_NULL( matrix_alloc(100, 0)); + test_assert_NULL( matrix_alloc(0, 0)); + test_assert_NULL( matrix_alloc(-1, -1)); +} + + + +void test_dims() { const int rows = 10; const int columns = 13; matrix_type * m = matrix_alloc(rows , columns); - test_assert_true( matrix_check_dims(m , rows , columns)); + test_assert_true( matrix_check_dims(m , rows , columns)); test_assert_false( matrix_check_dims(m , rows + 1 , columns)); test_assert_false( matrix_check_dims(m , rows , columns + 1)); matrix_free( m ); +} + + +void test_det4() { + matrix_type * m = matrix_alloc(4 , 4 ); + rng_type * rng = rng_alloc(MZRAN , INIT_DEV_URANDOM ); + for (int i=0; i < 10; i++) { + matrix_random_init( m , rng ); + { + double det4 = matrix_det4( m ); + double det = matrix_det( m ); + + test_assert_double_equal( det , det4 ); + } + } + + matrix_free( m ); + rng_free( rng ); +} + + +void test_det3() { + matrix_type * m = matrix_alloc(3 , 3 ); + rng_type * rng = rng_alloc(MZRAN , INIT_DEV_URANDOM ); + matrix_random_init( m , rng ); + + { + double det3 = matrix_det3( m ); + double det = matrix_det( m ); + + test_assert_double_equal( det , det3 ); + } + + matrix_free( m ); + rng_free( rng ); +} + + +void test_det2() { + matrix_type * m = matrix_alloc(2,2); + rng_type * rng = rng_alloc(MZRAN , INIT_DEV_URANDOM ); + matrix_random_init( m , rng ); + { + double det2 = matrix_det2( m ); + double det = matrix_det( m ); + + test_assert_double_equal( det , det2 ); + } + matrix_free( m ); + rng_free( rng ); +} + + +void test_readwrite() { + test_work_area_type * test_area = test_work_area_alloc("matrix-test"); + { + rng_type * rng = rng_alloc(MZRAN , INIT_DEV_URANDOM ); + matrix_type * m1 = matrix_alloc(3 , 3); + matrix_type * m2 = matrix_alloc(3 , 3); + matrix_random_init( m1 , rng ); + matrix_assign(m2 , m1); + + test_assert_true( matrix_equal( m1 , m2 ) ); + { + FILE * stream = util_fopen("m1" , "w"); + matrix_fwrite( m1 , stream ); + fclose( stream ); + } + matrix_random_init( m1 , rng ); + test_assert_false( matrix_equal( m1 , m2 ) ); + { + FILE * stream = util_fopen("m1" , "r"); + matrix_free( m1 ); + m1 = matrix_alloc(1,1); + printf("-----------------------------------------------------------------\n"); + matrix_fread( m1 , stream ); + test_assert_int_equal( matrix_get_rows(m1) , matrix_get_rows( m2)); + test_assert_int_equal( matrix_get_columns(m1) , matrix_get_columns( m2)); + util_fseek( stream , 0 , SEEK_SET); + { + matrix_type * m3 = matrix_fread_alloc( stream ); + test_assert_true( matrix_equal( m2 , m3 )); + matrix_free( m3 ); + } + fclose( stream ); + } + test_assert_true( matrix_equal( m1 , m2 ) ); + + matrix_free( m2 ); + matrix_free( m1 ); + rng_free( rng ); + } + test_work_area_free( test_area ); +} + + +void test_diag_std() { + const int N = 25; + double_vector_type * data = double_vector_alloc( 0,0); + rng_type * rng = rng_alloc(MZRAN , INIT_DEV_URANDOM ); + matrix_type * m = matrix_alloc( N , N ); + double sum1 = 0; + double sum2 = 0; + int i; + + for (i=0; i < N; i++) { + double R = rng_get_double( rng ); + matrix_iset(m , i , i , R); + double_vector_iset( data , i , R ); + + sum1 += R; + sum2 += R*R; + } + { + double mean = sum1 / N; + double std = sqrt( sum2 / N - mean * mean ); + + test_assert_double_equal( std , matrix_diag_std( m , mean )); + test_assert_double_equal( statistics_std( data ) , matrix_diag_std( m , mean )); + test_assert_double_equal( statistics_mean( data ) , mean ); + } + matrix_free( m ); + rng_free( rng ); +} + + + +int main( int argc , char ** argv) { + test_create_invalid(); + test_resize(); + test_column_equal(); + test_dims(); + test_det2(); + test_det3(); + test_det4(); + test_readwrite(); + test_diag_std(); exit(0); } diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_sscan_test.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_sscan_test.c new file mode 100644 index 0000000000..da9ac11a85 --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_sscan_test.c @@ -0,0 +1,68 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_util_sscan_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include + + + +void test_sscan_percent() { + { + const char * MIN_REALIZATIONS = "10%"; + double value = 0.0; + test_assert_true(util_sscanf_percent(MIN_REALIZATIONS, &value)); + test_assert_double_equal(10.0, value); + } + + { + const char * MIN_REALIZATIONS_no_percent = "10"; + double value = 0.0; + test_assert_false(util_sscanf_percent(MIN_REALIZATIONS_no_percent, &value)); + test_assert_double_equal(0.0, value); + } + + { + const char * MIN_REALIZATIONS_float = "10.2%"; + double value = 0.0; + test_assert_true(util_sscanf_percent(MIN_REALIZATIONS_float, &value)); + test_assert_double_equal(10.2, value); + } + + { + const char * MIN_REALIZATIONS_float_no_percentage = "10.2"; + double value = 0.0; + test_assert_false(util_sscanf_percent(MIN_REALIZATIONS_float_no_percentage, &value)); + test_assert_double_equal(0.0, value); + } + + { + const char * MIN_REALIZATIONS= "9 %"; + double value = 0.0; + test_assert_false(util_sscanf_percent(MIN_REALIZATIONS, &value)); + test_assert_double_equal(0.0, value); + } + +} + + +int main(int argc , char ** argv) { + test_sscan_percent(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_statistics.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_statistics.c new file mode 100644 index 0000000000..71ebdf654f --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_statistics.c @@ -0,0 +1,40 @@ +/* + Copyright (C) 2013 Statoil ASA, Norway. + + The file 'ert_util_statistics.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + + +#include + +#include +#include + + +void test_mean_std() { + double_vector_type * d = double_vector_alloc(0,0); + + double_vector_append(d , 0 ); + double_vector_append(d , 1 ); + + test_assert_double_equal( statistics_mean( d ) , 0.50 ); + test_assert_double_equal( statistics_std( d ) , 0.50 ); +} + + +int main( int argc , char ** argv ) { + test_mean_std(); +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_stringlist_test.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_stringlist_test.c index 8a0ad5a7d1..db66f36439 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/ert_util_stringlist_test.c +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_stringlist_test.c @@ -89,6 +89,80 @@ void test_iget_as_int() { } } +void test_iget_as_bool() { + stringlist_type * s = stringlist_alloc_new(); + stringlist_append_ref(s , "TRUE" ); + stringlist_append_ref(s , "True" ); + stringlist_append_ref(s , "true" ); + stringlist_append_ref(s , "T" ); + stringlist_append_ref(s , "1" ); + + stringlist_append_ref(s , "FALSE" ); + stringlist_append_ref(s , "False" ); + stringlist_append_ref(s , "false" ); + stringlist_append_ref(s , "F" ); + stringlist_append_ref(s , "0" ); + + stringlist_append_ref(s , "not_so_bool" ); + stringlist_append_ref(s , "8" ); + + + { + bool value = false; + bool valid = false; + + value = stringlist_iget_as_bool( s , 0 , &valid); + test_assert_true( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 1 , &valid); + test_assert_true( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 2 , &valid); + test_assert_true( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 3 , &valid); + test_assert_true( value ); + test_assert_true( valid ); + + + value = stringlist_iget_as_bool( s , 4 , &valid); + test_assert_true( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 5 , &valid); + test_assert_false( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 6 , &valid); + test_assert_false( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 7 , &valid); + test_assert_false( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 8 , &valid); + test_assert_false( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 9 , &valid); + test_assert_false( value ); + test_assert_true( valid ); + + value = stringlist_iget_as_bool( s , 10 , &valid); + test_assert_false( value ); + test_assert_false( valid ); + + value = stringlist_iget_as_bool( s , 11 , &valid); + test_assert_false( value ); + test_assert_false( valid ); + } +} + + void test_empty() { stringlist_type * s = stringlist_alloc_new(); stringlist_fprintf( s , "\n" , stdout ); @@ -193,6 +267,7 @@ int main( int argc , char ** argv) { test_char(); test_reverse(); test_iget_as_int(); + test_iget_as_bool(); test_split(); test_matching(); exit(0); diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_struct_vector.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_struct_vector.c new file mode 100644 index 0000000000..0a1cf8e686 --- /dev/null +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_struct_vector.c @@ -0,0 +1,84 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_util_struct_vector.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include + +#include +#include +#include + + + +struct test_struct { + int x; + double y; + int z; +}; + + + +void test_create() { + struct test_struct d; + struct_vector_type * struct_vector = struct_vector_alloc( sizeof d ); + test_assert_true( struct_vector_is_instance( struct_vector )); + test_assert_int_equal( struct_vector_get_size( struct_vector ) , 0 ); + struct_vector_free( struct_vector ); +} + +void alloc_invalid() { + struct_vector_alloc( 0 ); +} + + +void test_create_invalid() { + test_assert_util_abort( "struct_vector_alloc" , alloc_invalid , NULL ); +} + +void test_append_iget() { + struct test_struct d1,d2; + struct_vector_type * struct_vector = struct_vector_alloc( sizeof d1 ); + d1.x = 100; + d1.y = 99; + d1.z = 234; + + struct_vector_append( struct_vector , &d1 ); + test_assert_int_equal( struct_vector_get_size( struct_vector ) , 1 ); + + test_assert_false( d1.x == d2.x ); + test_assert_false( d1.y == d2.y ); + test_assert_false( d1.z == d2.z ); + + struct_vector_iget( struct_vector , 0 , &d2); + test_assert_true( d1.x == d2.x ); + test_assert_true( d1.y == d2.y ); + test_assert_true( d1.z == d2.z ); + + struct_vector_reset( struct_vector ); + test_assert_int_equal( struct_vector_get_size( struct_vector ) , 0 ); + + struct_vector_free( struct_vector ); +} + + + + +int main(int argc , char ** argv) { + test_create(); + test_create_invalid(); + test_append_iget(); +} diff --git a/ThirdParty/Ert/devel/libert_util/tests/ert_util_type_vector_test.c b/ThirdParty/Ert/devel/libert_util/tests/ert_util_type_vector_test.c index 06a6cfa4c4..5d522a9e2b 100644 --- a/ThirdParty/Ert/devel/libert_util/tests/ert_util_type_vector_test.c +++ b/ThirdParty/Ert/devel/libert_util/tests/ert_util_type_vector_test.c @@ -1,6 +1,6 @@ /* - Copyri ght (C) 2012 Statoil ASA, Norway. - + Copyright (C) 2012 Statoil ASA, Norway. + The file 'ert_util_type_vector_test.c' is part of ERT - Ensemble based Reservoir Tool. ERT is free software: you can redistribute it and/or modify @@ -28,6 +28,102 @@ void assert_equal( bool equal ) { } +void test_range_fill_int() { + int_vector_type * int_vector = int_vector_alloc(0,0); + + int_vector_range_fill( int_vector , 10 , 10 , 40 ); /* 10,20,30,40 */ + test_assert_int_equal( int_vector_size( int_vector ), 4); + test_assert_int_equal( int_vector_iget( int_vector , 0 ) , 10 ); + test_assert_int_equal( int_vector_iget( int_vector , 1 ) , 20 ); + test_assert_int_equal( int_vector_iget( int_vector , 2 ) , 30 ); + test_assert_int_equal( int_vector_iget( int_vector , 3 ) , 40 ); + + int_vector_range_fill( int_vector , 10 , 10 , 44 ); /* 10,20,30,40 */ + test_assert_int_equal( int_vector_size( int_vector ), 4); + test_assert_int_equal( int_vector_iget( int_vector , 0 ) , 10 ); + test_assert_int_equal( int_vector_iget( int_vector , 1 ) , 20 ); + test_assert_int_equal( int_vector_iget( int_vector , 2 ) , 30 ); + test_assert_int_equal( int_vector_iget( int_vector , 3 ) , 40 ); + + int_vector_range_fill( int_vector , 4 , -1 , 0 ); /* 4,3,2,1,0 */ + test_assert_int_equal( int_vector_size( int_vector ), 5); + test_assert_int_equal( int_vector_iget( int_vector , 0 ) , 4 ); + test_assert_int_equal( int_vector_iget( int_vector , 1 ) , 3 ); + test_assert_int_equal( int_vector_iget( int_vector , 2 ) , 2 ); + test_assert_int_equal( int_vector_iget( int_vector , 3 ) , 1 ); + test_assert_int_equal( int_vector_iget( int_vector , 4 ) , 0 ); + + int_vector_range_fill( int_vector , 20 , -10 , -3 ); /* 20,10,0 */ + test_assert_int_equal( int_vector_size( int_vector ), 3); + test_assert_int_equal( int_vector_iget( int_vector , 0 ) , 20 ); + test_assert_int_equal( int_vector_iget( int_vector , 1 ) , 10 ); + test_assert_int_equal( int_vector_iget( int_vector , 2 ) , 0 ); + + int_vector_free( int_vector ); +} + + +void test_range_fill_double() { + double_vector_type * double_vector = double_vector_alloc(0,0); + double_vector_range_fill( double_vector , 1,2,10 ); /* 1 , 3 , 5 , 7 , 9 */ + + test_assert_double_equal( double_vector_size( double_vector ), 5); + test_assert_double_equal( double_vector_iget( double_vector , 0 ) , 1 ); + test_assert_double_equal( double_vector_iget( double_vector , 1 ) , 3 ); + test_assert_double_equal( double_vector_iget( double_vector , 2 ) , 5 ); + test_assert_double_equal( double_vector_iget( double_vector , 3 ) , 7 ); + test_assert_double_equal( double_vector_iget( double_vector , 4 ) , 9 ); + + double_vector_range_fill( double_vector , 3,3,9 ); /* 3,6,9 */ + test_assert_double_equal( double_vector_size( double_vector ), 3); + test_assert_double_equal( double_vector_iget( double_vector , 0 ) , 3 ); + test_assert_double_equal( double_vector_iget( double_vector , 1 ) , 6 ); + test_assert_double_equal( double_vector_iget( double_vector , 2 ) , 9 ); + + double_vector_free( double_vector ); +} + + +void test_range_fill() { + test_range_fill_int(); + test_range_fill_double(); +} + + +void test_contains() { + int_vector_type * int_vector = int_vector_alloc( 0 , 100); + + test_assert_false( int_vector_contains( int_vector , 100 )); + int_vector_iset( int_vector , 0 , 77 ); + test_assert_false( int_vector_contains( int_vector , 100 )); + test_assert_true( int_vector_contains( int_vector , 77 )); + + int_vector_iset( int_vector , 10 , 33 ); + test_assert_true( int_vector_contains( int_vector , 100 )); + test_assert_true( int_vector_contains( int_vector , 77 )); + test_assert_true( int_vector_contains( int_vector , 33 )); + + int_vector_free( int_vector ); +} + +void test_contains_sorted() { + int_vector_type * int_vector = int_vector_alloc( 0 , 100); + + int_vector_append( int_vector , 99 ); + int_vector_append( int_vector , 89 ); + int_vector_append( int_vector , 79 ); + int_vector_append( int_vector , 109 ); + + int_vector_sort( int_vector ); + + test_assert_false( int_vector_contains( int_vector , 0 )); + test_assert_false( int_vector_contains( int_vector , 100 )); + test_assert_true( int_vector_contains( int_vector , 89 )); + test_assert_true( int_vector_contains( int_vector , 109 )); +} + + + void test_div() { int_vector_type * int_vector = int_vector_alloc( 0 , 100); int_vector_iset( int_vector , 10 , 100 ); @@ -39,6 +135,19 @@ void test_div() { } } +void test_memcpy_from_data() { + int_vector_type * int_vector = int_vector_alloc( 10 , 77 ); + int data[5] = {1,2,3,4,5}; + + int_vector_memcpy_from_data( int_vector , data , 5 ); + test_assert_int_equal( 5 , int_vector_size( int_vector )); + + for (int i=0; i < int_vector_size( int_vector ); i++) + test_assert_int_equal( i + 1 , int_vector_iget( int_vector , i )); + + int_vector_free( int_vector ); +} + void test_alloc() { const int size = 100; @@ -54,11 +163,171 @@ void test_alloc() { } +void int_vector_iget_invalid( void * arg ) { + int_vector_type * ivec = int_vector_safe_cast( arg ); + int_vector_iget(ivec , -1 ); +} + + +void test_abort() { + int_vector_type * ivec = int_vector_alloc(0,0); + test_assert_util_abort( "int_vector_assert_index" , int_vector_iget_invalid , ivec ); + int_vector_free( ivec ); +} + + + +void test_shift() { + int default_value = 88; + int_vector_type * v = int_vector_alloc(0,default_value); + + int_vector_append(v , 1 ); + int_vector_append(v , 2 ); + int_vector_append(v , 3 ); + test_assert_int_equal( 1 , int_vector_iget( v , 0 )); + test_assert_int_equal( 2 , int_vector_iget( v , 1 )); + test_assert_int_equal( 3 , int_vector_iget( v , 2 )); + + int_vector_rshift(v , 3 ); + test_assert_int_equal( 6 , int_vector_size( v )); + test_assert_int_equal( default_value , int_vector_iget( v , 0 )); + test_assert_int_equal( default_value , int_vector_iget( v , 1 )); + test_assert_int_equal( default_value , int_vector_iget( v , 2 )); + test_assert_int_equal( 1 , int_vector_iget( v , 3 )); + test_assert_int_equal( 2 , int_vector_iget( v , 4 )); + test_assert_int_equal( 3 , int_vector_iget( v , 5 )); + + int_vector_lshift(v,4); + test_assert_int_equal( 2 , int_vector_size( v )); + test_assert_int_equal( 2 , int_vector_iget( v , 0 )); + test_assert_int_equal( 3 , int_vector_iget( v , 1 )); + + int_vector_free( v ); +} + +void test_idel_insert() { + int_vector_type * vec = int_vector_alloc(0,0); + + int_vector_append(vec , 1 ); + int_vector_append(vec , 2 ); + int_vector_append(vec , 2 ); + int_vector_append(vec , 3 ); + + int_vector_fprintf(vec , stdout , "Vec0" , "%2d"); + int_vector_idel(vec , 1 ); + int_vector_fprintf(vec , stdout , "Vec1" , "%2d"); + int_vector_idel(vec , 1 ); + int_vector_fprintf(vec , stdout , "Vec2" , "%2d"); + + test_assert_int_equal( 2 , int_vector_size( vec )); + test_assert_int_equal( 1 , int_vector_iget( vec , 0 )); + test_assert_int_equal( 3 , int_vector_iget( vec , 1 )); + + int_vector_insert(vec , 1 , 2 ); + int_vector_insert(vec , 1 , 2 ); + test_assert_int_equal( 4 , int_vector_size( vec )); + test_assert_int_equal( 1 , int_vector_iget( vec , 0 )); + test_assert_int_equal( 2 , int_vector_iget( vec , 1 )); + test_assert_int_equal( 2 , int_vector_iget( vec , 2 )); + test_assert_int_equal( 3 , int_vector_iget( vec , 3 )); + + int_vector_free( vec ); +} + + + +void test_iset_block() { + int_vector_type * vec = int_vector_alloc(0,0); + + int_vector_iset_block( vec , 10 , 10 , 77 ); + test_assert_int_equal( int_vector_size( vec ) , 20 ); + { + int i; + for (i=10; i < 20; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , 77 ); + } + int_vector_iset_block( vec , 10 , 0 , 177 ); + test_assert_int_equal( int_vector_iget( vec , 10 ) , 77 ); + + int_vector_iset_block( vec , 10 , -11 , 66 ); + { + int i; + for (i=0; i <= 10; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , 66 ); + } + int_vector_free( vec ); +} + + +void test_resize() { + int i; + int def = 77; + int_vector_type * vec = int_vector_alloc(0,def); + int_vector_resize( vec , 10 ); + test_assert_int_equal( int_vector_size( vec ) , 10 ); + for (i=0; i < 10; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , def ); + + int_vector_iset_block( vec , 5 , 5 , 5 ); + for (i=5; i < 10; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , 5 ); + + int_vector_resize( vec , 5 ); + test_assert_int_equal( int_vector_size( vec ) , 5 ); + for (i=0; i < 5; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , def ); + + int_vector_resize( vec , 10 ); + test_assert_int_equal( int_vector_size( vec ) , 10 ); + for (i=0; i < 10; i++) + test_assert_int_equal( int_vector_iget( vec , i ) , def ); + + int_vector_free( vec ); +} + + +void test_del() { + int_vector_type * vec = int_vector_alloc(0,0); + + test_assert_int_equal( int_vector_del_value( vec , 77) , 0 ); + + int_vector_append(vec , 1); + int_vector_append(vec , 2); + int_vector_append(vec , 3); + int_vector_append(vec , 1); + int_vector_append(vec , 2); + int_vector_append(vec , 3); + int_vector_append(vec , 1); + int_vector_append(vec , 1); + + int_vector_fprintf( vec , stdout , "int_vector" , "%3d"); + + test_assert_int_equal( int_vector_del_value( vec , 77) , 0); + test_assert_int_equal( int_vector_del_value( vec , 2) , 2 ); + test_assert_int_equal( 6 , int_vector_size( vec )); + + int_vector_fprintf( vec , stdout , "int_vector" , "%3d"); + + test_assert_int_equal( 1 , int_vector_iget(vec , 0)); + test_assert_int_equal( 3 , int_vector_iget(vec , 1)); + test_assert_int_equal( 1 , int_vector_iget(vec , 2)); + test_assert_int_equal( 3 , int_vector_iget(vec , 3)); + test_assert_int_equal( 1 , int_vector_iget(vec , 4)); + test_assert_int_equal( 1 , int_vector_iget(vec , 5)); + + test_assert_int_equal( 4 , int_vector_del_value( vec , 1 )); + test_assert_int_equal( 2 , int_vector_size( vec )); + + test_assert_int_equal( 3 , int_vector_iget(vec , 0)); + test_assert_int_equal( 3 , int_vector_iget(vec , 1)); + int_vector_free( vec ); +} int main(int argc , char ** argv) { int_vector_type * int_vector = int_vector_alloc( 0 , 99); - + + test_abort(); test_assert_int_equal( -1 , int_vector_index(int_vector , 100)); test_assert_int_equal( -1 , int_vector_index_sorted(int_vector , 100)); @@ -68,7 +337,6 @@ int main(int argc , char ** argv) { int_vector_insert( int_vector , 2 , 77 ); int_vector_iset( int_vector , 5 , -10); - int_vector_fprintf( int_vector , stdout , "int_vector" , "%3d"); assert_equal( int_vector_iget(int_vector , 0 ) == 99 ); assert_equal( int_vector_iget(int_vector , 1 ) == 99 ); assert_equal( int_vector_iget(int_vector , 2 ) == 77 ); @@ -132,7 +400,16 @@ int main(int argc , char ** argv) { int_vector_free( v1 ); int_vector_free( v2 ); } + test_contains(); + test_contains_sorted(); + test_shift(); test_alloc(); test_div(); + test_memcpy_from_data(); + test_idel_insert(); + test_del(); + test_range_fill(); + test_iset_block(); + test_resize(); exit(0); } diff --git a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_pointset.h b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_pointset.h index d274136944..0262a38e70 100644 --- a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_pointset.h +++ b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_pointset.h @@ -35,6 +35,7 @@ typedef struct geo_pointset_struct geo_pointset_type; int geo_pointset_get_size( const geo_pointset_type * pointset ); void geo_pointset_iget_xy( const geo_pointset_type * pointset , int index , double * x , double * y); const double * geo_pointset_get_zcoord( const geo_pointset_type * pointset ); + bool geo_pointset_equal( const geo_pointset_type * pointset1 , const geo_pointset_type * pointset2); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_surface.h b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_surface.h index cafb177400..d3b5b14764 100644 --- a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_surface.h +++ b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_surface.h @@ -31,7 +31,7 @@ extern "C" { typedef struct geo_surface_struct geo_surface_type; - + bool geo_surface_equal( const geo_surface_type * surface1 , const geo_surface_type * surface2); void geo_surface_free( geo_surface_type * geo_surface ); void geo_surface_free__( void * arg); geo_pointset_type * geo_surface_get_pointset( const geo_surface_type * surface ); diff --git a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_util.h b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_util.h index f7eb45d6b7..d1dc4b1079 100644 --- a/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_util.h +++ b/ThirdParty/Ert/devel/libgeometry/include/ert/geometry/geo_util.h @@ -25,9 +25,16 @@ extern "C" { #endif #include + typedef enum { + GEO_UTIL_LINES_CROSSING = 0, + GEO_UTIL_LINES_PARALLELL = 1, + GEO_UTIL_LINES_OVERLAPPING = 2, + GEO_UTIL_LINES_DEGENERATE = 3 + } geo_util_xlines_status_enum; -bool geo_util_inside_polygon(const double * xlist , const double * ylist , int num_points , double x0 , double y0); + bool geo_util_inside_polygon(const double * xlist , const double * ylist , int num_points , double x0 , double y0); + geo_util_xlines_status_enum geo_util_xlines( const double ** points , double * x0, double * y0 ); #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libgeometry/src/geo_pointset.c b/ThirdParty/Ert/devel/libgeometry/src/geo_pointset.c index 4514f1f7a8..2fd426a2be 100644 --- a/ThirdParty/Ert/devel/libgeometry/src/geo_pointset.c +++ b/ThirdParty/Ert/devel/libgeometry/src/geo_pointset.c @@ -19,6 +19,7 @@ #include #include +#include #include @@ -122,7 +123,26 @@ void geo_pointset_iget_xy( const geo_pointset_type * pointset , int index , doub } +bool geo_pointset_equal( const geo_pointset_type * pointset1 , const geo_pointset_type * pointset2) { + bool equal = false; + + if (pointset1->size == pointset2->size) { + size_t byte_size = pointset2->size * sizeof * pointset2->xcoord; + if ((memcmp(pointset1->xcoord, pointset2->xcoord , byte_size) == 0) && + (memcmp(pointset1->ycoord, pointset2->ycoord , byte_size) == 0)) { + + if (pointset1->internal_z == pointset2->internal_z) { + if (pointset1->zcoord) { + if (memcmp(pointset1->zcoord, pointset2->zcoord , byte_size) == 0) + equal = true; + } else + equal = true; + } + } + } + return equal; +} diff --git a/ThirdParty/Ert/devel/libgeometry/src/geo_surface.c b/ThirdParty/Ert/devel/libgeometry/src/geo_surface.c index 950e7d0709..c8b2a86752 100644 --- a/ThirdParty/Ert/devel/libgeometry/src/geo_surface.c +++ b/ThirdParty/Ert/devel/libgeometry/src/geo_surface.c @@ -148,7 +148,7 @@ static void geo_surface_fprintf_zcoord( const geo_surface_type * surface , FILE static void geo_surface_fprintf_irap__( const geo_surface_type * surface, const char * filename , const double * zcoord) { - FILE * stream = util_fopen( filename , "w"); + FILE * stream = util_mkdir_fopen( filename , "w"); { geo_surface_fprintf_irap_header( surface , stream ); geo_surface_fprintf_zcoord( surface , stream, zcoord ); @@ -296,7 +296,12 @@ int geo_surface_get_size( const geo_surface_type * surface ) { } - +bool geo_surface_equal( const geo_surface_type * surface1 , const geo_surface_type * surface2) { + if (geo_surface_equal_header(surface1 , surface2)) + return geo_pointset_equal( surface1->pointset , surface2->pointset); + else + return false; +} diff --git a/ThirdParty/Ert/devel/libgeometry/src/geo_util.c b/ThirdParty/Ert/devel/libgeometry/src/geo_util.c index e9e1aec44b..6b89b77347 100644 --- a/ThirdParty/Ert/devel/libgeometry/src/geo_util.c +++ b/ThirdParty/Ert/devel/libgeometry/src/geo_util.c @@ -52,3 +52,73 @@ bool geo_util_inside_polygon(const double * xlist , const double * ylist , int n } return inside; } + + +geo_util_xlines_status_enum geo_util_xlines( const double ** points , double * x0, double * y0 ) { + double x1 = points[0][0]; + double x2 = points[1][0]; + double x3 = points[2][0]; + double x4 = points[3][0]; + + double y1 = points[0][1]; + double y2 = points[1][1]; + double y3 = points[2][1]; + double y4 = points[3][1]; + + double dx1 = (x2 - x1); + double dx2 = (x4 - x3); + double dy1 = (y2 - y1); + double dy2 = (y4 - y3); + + if ((dx1 == 0 && dy1 == 0) || + (dx2 == 0 && dy2 == 0)) + return GEO_UTIL_LINES_DEGENERATE; + + if ((dx1 != 0) && (dx2 != 0)) { + // Both lines have a finite slope. + double a1 = dy1 / dx1; + double a2 = dy2 / dx2; + + if (a1 != a2) { + // The two lines are not parallell and we will have a normal solution. + double x = ((y3 - y1) - a2*x3 + a1*x1) / (a1 - a2); + double y = a1*(x - x1) + y1; + + *x0 = x; + *y0 = y; + + return GEO_UTIL_LINES_CROSSING; + } else { + // The two lines are parallell - potentially overlapping. + double ytest = a1*(x3 - x1) + y1; + if (ytest == y3) + return GEO_UTIL_LINES_OVERLAPPING; + else + return GEO_UTIL_LINES_PARALLELL; + } + } else { + double x,y; + + if ((dx1 == dx2) && (dx1 == 0)) { + if (x1 == x3) + return GEO_UTIL_LINES_OVERLAPPING; + else + return GEO_UTIL_LINES_PARALLELL; + } + + // Only one of the lines is vertical - this will be a normal crossing. + if (dx1 == 0) { + double a2 = dy2 / dx2; + y = y3 + a2*(x1 - x3); + x = x1; + } else { + double a1 = dy1 / dx1; + y = y1 + a1*(x3 - x1); + x = x3; + } + *x0 = x; + *y0 = y; + return GEO_UTIL_LINES_CROSSING; + } +} + diff --git a/ThirdParty/Ert/devel/libgeometry/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libgeometry/tests/CMakeLists.txt index fccc73ffaf..1c6b037df5 100644 --- a/ThirdParty/Ert/devel/libgeometry/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libgeometry/tests/CMakeLists.txt @@ -5,5 +5,11 @@ add_test( geo_surface ${EXECUTABLE_OUTPUT_PATH}/geo_surface ${PROJECT_SOURCE_DIR}/test-data/Statoil/Geometry/Surface.irap ${PROJECT_SOURCE_DIR}/test-data/Statoil/Geometry/Surface_incompatible.irap ) + +add_executable( geo_util_xlines geo_util_xlines.c ) +target_link_libraries( geo_util_xlines ert_geometry test_util ) +add_test( geo_util_xlines ${EXECUTABLE_OUTPUT_PATH}/geo_util_xlines ) + + set_property( TEST geo_surface PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/libgeometry/tests/geo_surface.c b/ThirdParty/Ert/devel/libgeometry/tests/geo_surface.c index 09871cdd3b..6069b66a81 100644 --- a/ThirdParty/Ert/devel/libgeometry/tests/geo_surface.c +++ b/ThirdParty/Ert/devel/libgeometry/tests/geo_surface.c @@ -22,24 +22,49 @@ #include #include +#include #include -int main( int argc , char ** argv) { - char * input_file = argv[1]; - char * broken_file1 = argv[2]; - +void test_load(const char * input_file , const char * broken_file) { geo_surface_type * surface = geo_surface_fload_alloc_irap( input_file , false ); double * data = util_calloc( geo_surface_get_size( surface ) , sizeof * data ); test_assert_true( geo_surface_fload_irap_zcoord( surface , input_file , data )); test_assert_false( geo_surface_fload_irap_zcoord( surface , "/does/not/exist" , data )); - test_assert_false( geo_surface_fload_irap_zcoord( surface , broken_file1 , data )); + test_assert_false( geo_surface_fload_irap_zcoord( surface , broken_file , data )); free( data ); geo_surface_free( surface ); +} + + +void test_fprintf(const char * input_file ) { + geo_surface_type * surface1 = geo_surface_fload_alloc_irap( input_file , true ); + test_work_area_type * work_area = test_work_area_alloc( "SURFACE-FPRINTF" ); + + geo_surface_fprintf_irap( surface1 , "surface/test/surface.irap"); + { + geo_surface_type * surface2 = geo_surface_fload_alloc_irap( "surface/test/surface.irap" , true ); + + test_assert_true( geo_surface_equal( surface1 , surface2 )); + + geo_surface_free( surface2 ); + } + test_work_area_free( work_area ); + geo_surface_free( surface1 ); +} + + + +int main( int argc , char ** argv) { + char * input_file = argv[1]; + char * broken_file1 = argv[2]; + + test_load( input_file , broken_file1 ); + test_fprintf( input_file ); exit( 0 ); } diff --git a/ThirdParty/Ert/devel/libgeometry/tests/geo_util_xlines.c b/ThirdParty/Ert/devel/libgeometry/tests/geo_util_xlines.c new file mode 100644 index 0000000000..4cad82bee9 --- /dev/null +++ b/ThirdParty/Ert/devel/libgeometry/tests/geo_util_xlines.c @@ -0,0 +1,174 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'geo_util_xlines.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include + +#include + + + +void test_parallell_lines(double ** points) { + double x0 = -100; + double y0 = -100; + + points[0][0] = 0; + points[1][0] = 10; + + points[0][1] = 1; + points[1][1] = 1; + + + points[2][0] = 0; + points[3][0] = 10; + + points[2][1] = 4; + points[3][1] = 4; + + + test_assert_int_equal(GEO_UTIL_LINES_PARALLELL , geo_util_xlines( (const double **) points , &x0 , &y0 )); + test_assert_double_equal( x0 , -100 ); + test_assert_double_equal( y0 , -100 ); +} + + +void test_overlapping_lines(double ** points) { + double x0 = -100; + double y0 = -100; + + points[0][0] = 0; + points[1][0] = 1; + + points[0][1] = 0; + points[1][1] = 1; + + + points[2][0] = -1; + points[3][0] = 2; + + points[2][1] = -1; + points[3][1] = 2; + + + test_assert_int_equal(GEO_UTIL_LINES_OVERLAPPING , geo_util_xlines( (const double **) points , &x0 , &y0 )); + test_assert_double_equal( x0 , -100 ); + test_assert_double_equal( y0 , -100 ); +} + + + + +void test_crossing_lines(double ** points) { + double x0 = -100; + double y0 = -100; + + points[0][0] = 0; + points[1][0] = 1; + + points[0][1] = 0; + points[1][1] = 1; + + + points[2][0] = 0; + points[3][0] = 2; + + points[2][1] = 2; + points[3][1] = 0; + + + test_assert_int_equal(GEO_UTIL_LINES_CROSSING , geo_util_xlines( (const double **) points , &x0 , &y0 )); + test_assert_double_equal( x0 , 1 ); + test_assert_double_equal( y0 , 1 ); + + +} + + +void test_vertical_line(double ** points) { + double x0 = -100; + double y0 = -100; + + points[0][0] = -1; + points[1][0] = 1; + + points[0][1] = -1; + points[1][1] = 1; + + + points[2][0] = 0; + points[3][0] = 0; + + points[2][1] = 1; + points[3][1] = -1; + + + test_assert_int_equal(GEO_UTIL_LINES_CROSSING , geo_util_xlines( (const double **) points , &x0 , &y0 )); + test_assert_double_equal( x0 , 0 ); + test_assert_double_equal( y0 , 0 ); +} + + + +void test_degenerate_line(double ** points) { + double x0 = -100; + double y0 = -100; + + points[0][0] = -1; + points[1][0] = -1; + + points[0][1] = -1; + points[1][1] = -1; + + + points[2][0] = 0; + points[3][0] = 0; + + points[2][1] = 1; + points[3][1] = -1; + + + test_assert_int_equal(GEO_UTIL_LINES_DEGENERATE , geo_util_xlines( (const double **) points , &x0 , &y0 )); + test_assert_double_equal( x0 , -100 ); + test_assert_double_equal( y0 , -100 ); +} + + + + +int main( int argc , char ** argv) { + double ** points = util_malloc( 4 * sizeof * points); + int i; + for (i = 0; i < 4; i++) + points[i] = util_malloc( 2 * sizeof * points[i]); + { + test_parallell_lines(points); + test_crossing_lines(points); + test_overlapping_lines(points); + test_vertical_line( points ); + test_degenerate_line( points ); + } + for (i = 0; i < 4; i++) + free(points[i]); + + free( points ); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libjob_queue/CMakeLists.txt b/ThirdParty/Ert/devel/libjob_queue/CMakeLists.txt index 2a45e061a3..39eb770c76 100644 --- a/ThirdParty/Ert/devel/libjob_queue/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libjob_queue/CMakeLists.txt @@ -1,11 +1,12 @@ set( HAVE_LSF_LIBRARY OFF ) -set( LSF_INCLUDE_PATH $ENV{LSF_INCLUDE_PATH} CACHE FILEPATH "Path to search for LSF header file lsf/lsf.h") -set( LSF_LIB_PATH $ENV{LSF_HOME}/lib CACHE FILEPATH "Path to search for LSF library files") + +set( ERT_LSF_LIB_PATH "" CACHE FILEPATH "Path to search for the LSF libraries" ) +set( ERT_LSF_INCLUDE_PATH "" CACHE FILEPATH "Path to search for the LSF header files" ) find_path( LSF_HEADER_PATH lsf/lsf.h - PATHS ${LSF_INCLUDE_PATH}) + PATHS ${ERT_LSF_INCLUDE_PATH}) -find_library( LSF_LIBRARY NAMES lsf PATHS ${LSF_LIB_PATH}) +find_library( LSF_LIBRARY NAMES lsf PATHS ${ERT_LSF_LIB_PATH}) if (LSF_HEADER_PATH) if (LSF_LIBRARY) diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_job.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_job.h index b358a2beb3..5e5aa0ad9b 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_job.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_job.h @@ -51,7 +51,7 @@ const stringlist_type * ext_job_get_arglist( const ext_job_type * ext_job ); bool ext_job_is_shared( const ext_job_type * ext_job ); bool ext_job_is_private( const ext_job_type * ext_job ); -void ext_job_set_executable(ext_job_type * ext_job, const char * executable); +void ext_job_set_executable(ext_job_type * ext_job, const char * executable, const char * execuatble_raw); const char * ext_job_get_executable(const ext_job_type * ext_job); diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_joblist.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_joblist.h index 59f528e4a2..4f279755da 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_joblist.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/ext_joblist.h @@ -41,6 +41,7 @@ ext_job_type * ext_joblist_get_job_copy(const ext_joblist_type * , const ch bool ext_joblist_has_job(const ext_joblist_type * , const char * ); stringlist_type * ext_joblist_alloc_list( const ext_joblist_type * joblist); bool ext_joblist_del_job( ext_joblist_type * joblist , const char * job_name ); +void ext_joblist_add_jobs_in_directory(ext_joblist_type * joblist , const char * path, const char * license_root_path, bool user_mode ); #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/torque_driver.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/torque_driver.h index 5df778021f..3a89abfd4b 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/torque_driver.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/torque_driver.h @@ -35,6 +35,8 @@ extern "C" { #define TORQUE_NUM_CPUS_PER_NODE "NUM_CPUS_PER_NODE" #define TORQUE_NUM_NODES "NUM_NODES" #define TORQUE_KEEP_QSUB_OUTPUT "KEEP_QSUB_OUTPUT" +#define TORQUE_CLUSTER_LABEL "CLUSTER_LABEL" +#define TORQUE_JOB_PREFIX_KEY "JOB_PREFIX" #define TORQUE_DEFAULT_QSUB_CMD "qsub" #define TORQUE_DEFAULT_QSTAT_CMD "qstat" diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow.h index ae95f2cca9..f89706d649 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow.h @@ -28,13 +28,14 @@ extern "C" { #include +#include #include typedef struct workflow_struct workflow_type; const config_error_type * workflow_get_last_error( const workflow_type * workflow); workflow_type * workflow_alloc( const char * src_file , workflow_joblist_type * joblist); - bool workflow_run( workflow_type * workflow , void * self , bool verbose , const subst_list_type * context); + bool workflow_run( workflow_type * workflow, void * self , bool verbose , const subst_list_type * context); void workflow_free( workflow_type * workflow ); void workflow_free__( void * arg ); @@ -42,6 +43,12 @@ extern "C" { void * workflow_iget_stack_ptr( const workflow_type * workflow , int index); void * workflow_pop_stack( workflow_type * workflow ); + int workflow_size( const workflow_type * workflow); + workflow_job_type * workflow_iget_job( const workflow_type * workflow, int index); + stringlist_type * workflow_iget_arguments( const workflow_type * workflow, int index); + bool workflow_try_compile( workflow_type * script , const subst_list_type * context); + UTIL_IS_INSTANCE_HEADER( workflow ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h index 3dbd202395..ef56e5b609 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h @@ -40,9 +40,22 @@ extern "C" { void workflow_job_update_config_compiler( const workflow_job_type * workflow_job , config_type * config_compiler ); void workflow_job_set_executable( workflow_job_type * workflow_job , const char * executable); + char * workflow_job_get_executable( workflow_job_type * workflow_job); + + void workflow_job_set_internal_script( workflow_job_type * workflow_job , const char * script_path); + char* workflow_job_get_internal_script_path( workflow_job_type * workflow_job); + bool workflow_job_is_internal_script( workflow_job_type * workflow_job); + void workflow_job_set_function( workflow_job_type * workflow_job , const char * function); + char * workflow_job_get_function( workflow_job_type * workflow_job); void workflow_job_set_module( workflow_job_type * workflow_job , const char * module); - void * workflow_job_run( const workflow_job_type * job , void * self , bool verbose , const stringlist_type * arg); + char * workflow_job_get_module( workflow_job_type * workflow_job); + void * workflow_job_run( const workflow_job_type * job, void * self , bool verbose , const stringlist_type * arg); + + int workflow_job_get_min_arg( const workflow_job_type * workflow_job ); + int workflow_job_get_max_arg( const workflow_job_type * workflow_job ); + config_item_types workflow_job_iget_argtype( const workflow_job_type * workflow_job, int index); + #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_joblist.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_joblist.h index 7b9da6ed7e..b260979f4e 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_joblist.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_joblist.h @@ -37,7 +37,8 @@ typedef struct workflow_joblist_struct workflow_joblist_type; bool workflow_joblist_add_job_from_file( workflow_joblist_type * joblist , const char * job_name , const char * config_file ); config_type * workflow_joblist_get_compiler( const workflow_joblist_type * joblist ); config_type * workflow_joblist_get_job_config( const workflow_joblist_type * joblist ); - + bool workflow_joblist_has_job( const workflow_joblist_type * joblist , const char * job_name); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libjob_queue/src/ext_job.c b/ThirdParty/Ert/devel/libjob_queue/src/ext_job.c index a1ebbc9ff8..c9e19de83b 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/ext_job.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/ext_job.c @@ -308,53 +308,46 @@ void ext_job_set_max_time( ext_job_type * ext_job , int max_time ) { /** - There are many different alternatives for what the @executable - variable points to. The main classification is whether the - @executable corresponds to an existing file or not: + @executable parameter: + The raw executable is either + - an absolute path read directly from config + - an absolute path constructed from the relative path from config + with the assumption that the path was a relative path from the + location of the job description file to the executable. + + @executable_raw parameter: + The raw executable as read from config, unprocessed. + + This method have the following logic: + + @executable exists: + We store the full path as the executable field of the job; and + try to update the mode of the full_path executable to make sure it + is executable. + + @executable does not exist, but @executable_raw exists: + We have found an executable relative to the current working + directory. This is deprecated behaviour, support will later be + removed. Suggest new path to executable to user, relative to job + description file and do a recursive call to this method, using + the absolute path as @executable parameter + + @executable does not exist, @executable_raw does not exist and + is an absolute path: + Write error message + + @executable does not exist, @executable_raw does not exist and + is a relative path: + Search trough the PATH variable to try to locate the executable. + If found, do a recursive call to this method, using the absolute path + as @executable parameter - @executable exists: We verify that the executable is indeed - executable for the current user; if this check fails the job - is marked as invalid and later discarded. - - @executable does not exist: In this case we check whether the - @executable parameter corresponds to an absolute or relative - path: - - @executable is an absolute path: Discard the job. - - @executable is a relative path: Try to check the PATH - variable, otherwise use the input value and hope that input - value should be interpreted as template key which will be - replaced upon execution. */ -void ext_job_set_executable(ext_job_type * ext_job, const char * executable) { +void ext_job_set_executable(ext_job_type * ext_job, const char * executable, const char * executable_raw) { - if (!util_file_exists(executable)) { - if (util_is_abs_path( executable )) { - /* If you have given an absolute path (i.e. starting with '/' to - a non existing job we mark it as invalid - no possibility to - provide context replacement afterwards. The job will be - discarded by the calling scope. - */ - fprintf(stderr , "** The executable:%s can not be found - job:%s will not be available.\n" , executable , ext_job->name ); - ext_job->__valid = false; - } else { - /* Go through the PATH variable to try to locate the executable. */ - char * path_executable = util_alloc_PATH_executable( executable ); - - if (path_executable != NULL) { - ext_job_set_executable( ext_job , path_executable ); - free( path_executable ); - } else - /* We take the chance that user will supply a valid subst key for this later; - if the final executable is not an actually executable file when exporting the - job from ext_job_python_fprintf() a big warning will be written on stderr. - */ - ext_job->executable = util_realloc_string_copy(ext_job->executable , executable); - } - } else { - /* + if (util_file_exists(executable)) { + /* The @executable parameter points to an existing file; we store the full path as the executable field of the job; we also try to update the mode of the full_path executable to make sure it @@ -364,9 +357,75 @@ void ext_job_set_executable(ext_job_type * ext_job, const char * executable) { __update_mode( full_path , S_IRUSR + S_IWUSR + S_IXUSR + S_IRGRP + S_IWGRP + S_IXGRP + S_IROTH + S_IXOTH); /* u:rwx g:rwx o:rx */ ext_job->executable = util_realloc_string_copy(ext_job->executable , full_path); free( full_path ); + } else if (util_file_exists(executable_raw)) { + /* + This "if" case means that we have found an executable relative + to the current working directory. This is deprecated behaviour, + support will be removed + */ + char * full_path = util_alloc_abs_path(executable_raw); + const char * job_description_file = ext_job_get_config_file(ext_job); + char * path_to_job_descr_file = util_split_alloc_dirname(job_description_file); + char * new_relative_path_to_exe = util_alloc_rel_path(path_to_job_descr_file, full_path); + char * relative_config_file = util_alloc_rel_path(NULL , ext_job->config_file); + + fprintf(stderr,"/----------------------------------------------------------------\n"); + fprintf(stderr,"| ** WARNING ** \n"); + fprintf(stderr,"|\n"); + fprintf(stderr,"| The convention for locating the executable in a forward model \n"); + fprintf(stderr,"| job has changed. When using a relative path in the EXECUTABLE \n"); + fprintf(stderr,"| setting in the job description file, the path will be interpreted\n"); + fprintf(stderr,"| relative to the location of the job description file. \n"); + fprintf(stderr,"|\n"); + fprintf(stderr,"| The job:\'%s\' will temporarilty continue to work in the \n",ext_job->name); + fprintf(stderr,"| present form, but it is recommended to update: \n"); + fprintf(stderr,"|\n"); + fprintf(stderr,"| 1. Open the file:%s in an editor \n",relative_config_file); + fprintf(stderr,"|\n"); + fprintf(stderr,"| 2. Change the EXECUTABLE line to: \n"); + fprintf(stderr,"|\n"); + fprintf(stderr,"| EXECUTABLE %s \n" , new_relative_path_to_exe); + fprintf(stderr,"|\n"); + fprintf(stderr,"| The main advantage with this change in behaviour is that the\n"); + fprintf(stderr,"| job description file and the executable can be relocated.\n"); + fprintf(stderr,"\\----------------------------------------------------------------\n\n"); + + ext_job_set_executable(ext_job, full_path, NULL); + + free(new_relative_path_to_exe); + free(path_to_job_descr_file); + free(full_path); + free(relative_config_file); + + } else if (util_is_abs_path( executable_raw )) { + /* If you have given an absolute path (i.e. starting with '/' to + a non existing job we mark it as invalid - no possibility to + provide context replacement afterwards. The job will be + discarded by the calling scope. + */ + fprintf(stderr , "** Warning: the executable:%s can not be found,\n" + " job:%s will not be available.\n" , executable , ext_job->name ); + ext_job->__valid = false; + } else { + /* Go through the PATH variable to try to locate the executable. */ + char * path_executable = util_alloc_PATH_executable( executable_raw ); + + if (path_executable != NULL) { + ext_job_set_executable( ext_job , path_executable, NULL ); + free( path_executable ); + } else { + /* We take the chance that user will supply a valid subst key for this later; + if the final executable is not an actually executable file when exporting the + job from ext_job_python_fprintf() a big warning will be written on stderr. + */ + fprintf(stderr , "** Warning: Unable to locate the executable %s for job %s.\n" + " Path to executable must be relative to the job description file, or an absolute path.\n" + " Please update job EXECUTABLE for job %s. \n" , executable , ext_job->name, ext_job->name); + ext_job->__valid = false; + } } - - /* + + /* If in the end we do not have execute rights to the executable : discard the job. */ @@ -374,7 +433,7 @@ void ext_job_set_executable(ext_job_type * ext_job, const char * executable) { if (util_file_exists(executable)) { if (!util_is_executable( ext_job->executable )) { fprintf(stderr , "** You do not have execute rights to:%s - job will not be available.\n" , ext_job->executable); - ext_job->__valid = false; /* Mark the job as NOT successfully installed - the ext_job + ext_job->__valid = false; /* Mark the job as NOT successfully installed - the ext_job instance will later be freed and discarded. */ } } @@ -382,6 +441,7 @@ void ext_job_set_executable(ext_job_type * ext_job, const char * executable) { } + /** Observe that this does NOT reread the ext_job instance from the new config_file. @@ -747,7 +807,7 @@ ext_job_type * ext_job_fscanf_alloc(const char * name , const char * license_roo item = config_add_schema_item(config , "STDIN" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); item = config_add_schema_item(config , "STDOUT" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); item = config_add_schema_item(config , "STDERR" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); - item = config_add_schema_item(config , "EXECUTABLE" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); + item = config_add_schema_item(config , "EXECUTABLE" , true ); config_schema_item_set_argc_minmax(item , 1 , 1 ); config_schema_item_iset_type(item, 0, CONFIG_PATH); item = config_add_schema_item(config , "TARGET_FILE" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); item = config_add_schema_item(config , "ERROR_FILE" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); item = config_add_schema_item(config , "START_FILE" , false ); config_schema_item_set_argc_minmax(item , 1 , 1 ); @@ -765,11 +825,16 @@ ext_job_type * ext_job_fscanf_alloc(const char * name , const char * license_roo if (config_item_set(config , "ERROR_FILE")) ext_job_set_error_file(ext_job , config_iget(config , "ERROR_FILE" , 0,0)); if (config_item_set(config , "TARGET_FILE")) ext_job_set_target_file(ext_job , config_iget(config , "TARGET_FILE" , 0,0)); if (config_item_set(config , "START_FILE")) ext_job_set_start_file(ext_job , config_iget(config , "START_FILE" , 0,0)); - if (config_item_set(config , "EXECUTABLE")) ext_job_set_executable(ext_job , config_iget(config , "EXECUTABLE" , 0,0)); if (config_item_set(config , "MAX_RUNNING")) ext_job_set_max_running(ext_job , config_iget_as_int(config , "MAX_RUNNING" , 0,0)); if (config_item_set(config , "MAX_RUNNING_MINUTES")) ext_job_set_max_time(ext_job , config_iget_as_int(config , "MAX_RUNNING_MINUTES" , 0,0)); + { + const char * executable = config_get_value_as_abspath(config , "EXECUTABLE"); + const char * executable_raw = config_iget(config , "EXECUTABLE" , 0,0); + ext_job_set_executable(ext_job , executable, executable_raw); + } + { config_content_node_type * arg_node = config_get_value_node( config , "ARGLIST"); diff --git a/ThirdParty/Ert/devel/libjob_queue/src/ext_joblist.c b/ThirdParty/Ert/devel/libjob_queue/src/ext_joblist.c index 9f950f5a3c..a898a9d2e4 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/ext_joblist.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/ext_joblist.c @@ -19,6 +19,10 @@ #include #include #include +#include +#include +#include +#include #include #include @@ -148,5 +152,32 @@ hash_type * ext_joblist_get_jobs( const ext_joblist_type * joblist ) { return joblist->jobs; } +void ext_joblist_add_jobs_in_directory(ext_joblist_type * joblist , const char * path, const char * license_root_path, bool user_mode ) { + DIR * dirH = opendir( path ); + if (dirH) { + while (true) { + struct dirent * entry = readdir( dirH ); + if (entry != NULL) { + if ((strcmp(entry->d_name , ".") != 0) && (strcmp(entry->d_name , "..") != 0)) { + char * full_path = util_alloc_filename( path , entry->d_name , NULL ); + if (util_is_file( full_path )) { + ext_job_type * new_job = ext_job_fscanf_alloc(entry->d_name, license_root_path, user_mode, full_path); + if (new_job != NULL) { + ext_joblist_add_job(joblist, entry->d_name, new_job); + } + else{ + fprintf(stderr," Failed to add forward model job: %s \n",full_path); + } + } + free( full_path ); + } + } else + break; + } + closedir( dirH ); + } else + fprintf(stderr, "** Warning: failed to open jobs directory: %s\n", path); +} + diff --git a/ThirdParty/Ert/devel/libjob_queue/src/torque_driver.c b/ThirdParty/Ert/devel/libjob_queue/src/torque_driver.c index 00bfafbf27..83eb32bd13 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/torque_driver.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/torque_driver.c @@ -24,6 +24,7 @@ #define TORQUE_DRIVER_TYPE_ID 34873653 #define TORQUE_JOB_TYPE_ID 12312312 + struct torque_driver_struct { UTIL_TYPE_ID_DECLARATION; char * queue_name; @@ -31,11 +32,12 @@ struct torque_driver_struct { char * qstat_cmd; char * qdel_cmd; char * num_cpus_per_node_char; + char * job_prefix; char * num_nodes_char; bool keep_qsub_output; int num_cpus_per_node; int num_nodes; - + char * cluster_label; }; struct torque_job_struct { @@ -62,6 +64,8 @@ void * torque_driver_alloc() { torque_driver->keep_qsub_output = false; torque_driver->num_cpus_per_node = 1; torque_driver->num_nodes = 1; + torque_driver->cluster_label = NULL; + torque_driver->job_prefix = NULL; torque_driver_set_option(torque_driver, TORQUE_QSUB_CMD, TORQUE_DEFAULT_QSUB_CMD); torque_driver_set_option(torque_driver, TORQUE_QSTAT_CMD, TORQUE_DEFAULT_QSTAT_CMD); @@ -110,6 +114,14 @@ static bool torque_driver_set_keep_qsub_output(torque_driver_type * driver, cons } } +static void torque_driver_set_job_prefix(torque_driver_type * driver, const char * job_prefix){ + driver->job_prefix = job_prefix; +} + +static void torque_driver_set_cluster_label(torque_driver_type * driver, const char* cluster_label) { + driver->cluster_label = util_realloc_string_copy(driver->cluster_label, cluster_label); +} + static bool torque_driver_set_num_cpus_per_node(torque_driver_type * driver, const char* num_cpus_per_node_char) { int num_cpus_per_node = 0; if (util_sscanf_int(num_cpus_per_node_char, &num_cpus_per_node)) { @@ -139,6 +151,10 @@ bool torque_driver_set_option(void * __driver, const char * option_key, const vo option_set = torque_driver_set_num_nodes(driver, value); else if (strcmp(TORQUE_KEEP_QSUB_OUTPUT, option_key) == 0) option_set = torque_driver_set_keep_qsub_output(driver, value); + else if (strcmp(TORQUE_CLUSTER_LABEL, option_key) == 0) + torque_driver_set_cluster_label(driver, value); + else if(strcmp(TORQUE_JOB_PREFIX_KEY, option_key) == 0) + torque_driver_set_job_prefix(driver, value); else option_set = false; } @@ -162,6 +178,10 @@ const void * torque_driver_get_option(const void * __driver, const char * option return driver->num_nodes_char; else if (strcmp(TORQUE_KEEP_QSUB_OUTPUT, option_key) == 0) return driver->keep_qsub_output ? "1" : "0"; + else if (strcmp(TORQUE_CLUSTER_LABEL, option_key) == 0) + return driver->cluster_label; + else if(strcmp(TORQUE_JOB_PREFIX_KEY, option_key) == 0) + return driver->job_prefix; else { util_abort("%s: option_id:%s not recognized for TORQUE driver \n", __func__, option_key); return NULL; @@ -177,6 +197,8 @@ void torque_driver_init_option_list(stringlist_type * option_list) { stringlist_append_ref(option_list, TORQUE_NUM_CPUS_PER_NODE); stringlist_append_ref(option_list, TORQUE_NUM_NODES); stringlist_append_ref(option_list, TORQUE_KEEP_QSUB_OUTPUT); + stringlist_append_ref(option_list, TORQUE_CLUSTER_LABEL); + stringlist_append_ref(option_list, TORQUE_JOB_PREFIX_KEY); } torque_job_type * torque_job_alloc() { @@ -202,7 +224,12 @@ stringlist_type * torque_driver_alloc_cmd(torque_driver_type * driver, } { - char * resource_string = util_alloc_sprintf("nodes=%d:ppn=%d", driver->num_nodes, driver->num_cpus_per_node); + char * resource_string; + if (driver->cluster_label) + resource_string = util_alloc_sprintf("nodes=%d:%s:ppn=%d", driver->num_nodes, driver->cluster_label, driver->num_cpus_per_node); + else + resource_string = util_alloc_sprintf("nodes=%d:ppn=%d", driver->num_nodes, driver->num_cpus_per_node); + stringlist_append_ref(argv, "-l"); stringlist_append_copy(argv, resource_string); free(resource_string); @@ -274,7 +301,7 @@ static int torque_driver_submit_shell_job(torque_driver_type * driver, torque_job_create_submit_script(script_filename, submit_cmd, job_argc, job_argv); { int p_units_from_driver = driver->num_cpus_per_node * driver->num_nodes; - if (num_cpu != p_units_from_driver) { + if (num_cpu > p_units_from_driver) { util_abort("%s: Error in config, job's config requires %d processing units, but config says %s: %d, and %s: %d, which multiplied becomes: %d \n", __func__, num_cpu, TORQUE_NUM_CPUS_PER_NODE, driver->num_cpus_per_node, TORQUE_NUM_NODES, driver->num_nodes, p_units_from_driver); } @@ -314,12 +341,22 @@ void * torque_driver_submit_job(void * __driver, int argc, const char ** argv) { torque_driver_type * driver = torque_driver_safe_cast(__driver); + char * local_job_name = NULL; + if(driver->job_prefix != NULL){ + local_job_name = util_alloc_sprintf("%s%s",driver->job_prefix, job_name); + } + else{ + local_job_name = job_name; + } torque_job_type * job = torque_job_alloc(); { - job->torque_jobnr = torque_driver_submit_shell_job(driver, run_path, job_name, submit_cmd, num_cpu, argc, argv); + job->torque_jobnr = torque_driver_submit_shell_job(driver, run_path, local_job_name, submit_cmd, num_cpu, argc, argv); job->torque_jobnr_char = util_alloc_sprintf("%ld", job->torque_jobnr); } + if(driver->job_prefix != NULL){ + free(local_job_name); + } if (job->torque_jobnr > 0) return job; else { diff --git a/ThirdParty/Ert/devel/libjob_queue/src/workflow.c b/ThirdParty/Ert/devel/libjob_queue/src/workflow.c index 09d315b04b..a8cdd7863d 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/workflow.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/workflow.c @@ -108,7 +108,7 @@ static void workflow_store_error( workflow_type * workflow , const config_error_ -static bool workflow_try_compile( workflow_type * script , const subst_list_type * context) { +bool workflow_try_compile( workflow_type * script , const subst_list_type * context) { if (util_file_exists( script->src_file )) { const char * src_file = script->src_file; char * tmp_file = NULL; @@ -174,7 +174,7 @@ static bool workflow_try_compile( workflow_type * script , const subst_list_type } -bool workflow_run(workflow_type * workflow , void * self , bool verbose , const subst_list_type * context) { +bool workflow_run(workflow_type * workflow, void * self , bool verbose , const subst_list_type * context) { vector_clear( workflow->stack ); workflow_try_compile( workflow , context); @@ -182,7 +182,7 @@ bool workflow_run(workflow_type * workflow , void * self , bool verbose , const int icmd; for (icmd = 0; icmd < vector_get_size( workflow->cmd_list ); icmd++) { const cmd_type * cmd = vector_iget_const( workflow->cmd_list , icmd ); - void * return_value = workflow_job_run( cmd->workflow_job , self , verbose , cmd->arglist ); + void * return_value = workflow_job_run( cmd->workflow_job, self , verbose , cmd->arglist ); vector_push_front_ref( workflow->stack , return_value ); } return true; @@ -223,7 +223,7 @@ workflow_type * workflow_alloc( const char * src_file , workflow_joblist_type * static UTIL_SAFE_CAST_FUNCTION( workflow , WORKFLOW_TYPE_ID ) - +UTIL_IS_INSTANCE_FUNCTION( workflow , WORKFLOW_TYPE_ID) void workflow_free( workflow_type * workflow ) { free( workflow->src_file ); @@ -246,3 +246,17 @@ void workflow_free__( void * arg ) { const config_error_type * workflow_get_last_error( const workflow_type * workflow) { return workflow->last_error; } + +int workflow_size(const workflow_type * workflow) { + return vector_get_size( workflow->cmd_list ); +} + +workflow_job_type * workflow_iget_job( const workflow_type * workflow, int index) { + const cmd_type * cmd = vector_iget_const( workflow->cmd_list , index ); + return cmd->workflow_job; +} + +stringlist_type * workflow_iget_arguments( const workflow_type * workflow, int index) { + const cmd_type * cmd = vector_iget_const( workflow->cmd_list , index ); + return cmd->arglist; +} diff --git a/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c b/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c index 31718a1ba6..3e6c0bce9b 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c @@ -19,6 +19,9 @@ #include #include #include +#include +#include +#include #include #include @@ -39,12 +42,14 @@ #define INTERNAL_KEY "INTERNAL" #define MODULE_KEY "MODULE" #define FUNCTION_KEY "FUNCTION" +#define SCRIPT_KEY "SCRIPT" #define EXECUTABLE_KEY "EXECUTABLE" #define NULL_STRING "NULL" #define WORKFLOW_JOB_STRING_TYPE "STRING" #define WORKFLOW_JOB_INT_TYPE "INT" #define WORKFLOW_JOB_FLOAT_TYPE "FLOAT" +#define WORKFLOW_JOB_BOOL_TYPE "BOOL" #define WORKFLOW_JOB_TYPE_ID 614441 @@ -56,6 +61,7 @@ struct workflow_job_struct { int max_arg; int_vector_type * arg_types; // Should contain values from the config_item_types enum in config.h. char * executable; + char * internal_script_path; char * module; char * function; char * name; @@ -90,13 +96,18 @@ config_type * workflow_job_alloc_config() { item = config_add_schema_item( config , ARG_TYPE_KEY , false ); config_schema_item_set_argc_minmax( item , 2 , 2 ); config_schema_item_iset_type( item , 0 , CONFIG_INT ); - config_schema_item_set_indexed_selection_set( item , 1 , 3 , (const char *[3]) {WORKFLOW_JOB_STRING_TYPE , WORKFLOW_JOB_INT_TYPE , WORKFLOW_JOB_FLOAT_TYPE}); + config_schema_item_set_indexed_selection_set( item , 1 , 4 , (const char *[4]) {WORKFLOW_JOB_STRING_TYPE , WORKFLOW_JOB_INT_TYPE , WORKFLOW_JOB_FLOAT_TYPE, WORKFLOW_JOB_BOOL_TYPE}); /*****************************************************************/ item = config_add_schema_item( config , EXECUTABLE_KEY , false ); config_schema_item_set_argc_minmax( item , 1 , 1 ); config_schema_item_iset_type( item , 0 , CONFIG_PATH ); + /*****************************************************************/ + item = config_add_schema_item( config , SCRIPT_KEY , false ); + config_schema_item_set_argc_minmax( item , 1 , 1 ); + config_schema_item_iset_type( item , 0 , CONFIG_PATH ); + /*---------------------------------------------------------------*/ item = config_add_schema_item( config , FUNCTION_KEY , false ); @@ -141,9 +152,10 @@ workflow_job_type * workflow_job_alloc( const char * name , bool internal ) { workflow_job->max_arg = CONFIG_DEFAULT_ARG_MAX; workflow_job->arg_types = int_vector_alloc( 0 , CONFIG_STRING ); - workflow_job->executable = NULL; - workflow_job->module = NULL; - workflow_job->function = NULL; + workflow_job->executable = NULL; + workflow_job->internal_script_path = NULL; + workflow_job->module = NULL; + workflow_job->function = NULL; if (name == NULL) util_abort("%s: trying to create workflow_job with name == NULL - illegal\n",__func__); @@ -160,6 +172,21 @@ void workflow_job_set_executable( workflow_job_type * workflow_job , const char workflow_job->executable = util_realloc_string_copy( workflow_job->executable , executable ); } +char* workflow_job_get_executable( workflow_job_type * workflow_job) { + return workflow_job->executable; +} + +void workflow_job_set_internal_script( workflow_job_type * workflow_job , const char * script_path ) { + workflow_job->internal_script_path = util_realloc_string_copy( workflow_job->internal_script_path , script_path ); +} + +char* workflow_job_get_internal_script_path( workflow_job_type * workflow_job) { + return workflow_job->internal_script_path; +} + +bool workflow_job_is_internal_script( workflow_job_type * workflow_job) { + return workflow_job->internal && workflow_job->internal_script_path != NULL; +} void workflow_job_set_module( workflow_job_type * workflow_job , const char * module) { if (strcmp(module ,NULL_STRING) == 0) @@ -168,14 +195,20 @@ void workflow_job_set_module( workflow_job_type * workflow_job , const char * mo workflow_job->module = util_realloc_string_copy( workflow_job->module , module ); } +char * workflow_job_get_module( workflow_job_type * workflow_job) { + return workflow_job->module; +} void workflow_job_set_function( workflow_job_type * workflow_job , const char * function) { workflow_job->function = util_realloc_string_copy( workflow_job->function , function ); } +char * workflow_job_get_function( workflow_job_type * workflow_job) { + return workflow_job->function; +} void workflow_job_iset_argtype( workflow_job_type * workflow_job , int iarg , config_item_types type) { - if (type == CONFIG_STRING || type == CONFIG_INT || type == CONFIG_FLOAT) + if (type == CONFIG_STRING || type == CONFIG_INT || type == CONFIG_FLOAT || type == CONFIG_BOOL) int_vector_iset( workflow_job->arg_types , iarg , type ); } @@ -191,10 +224,14 @@ int workflow_job_get_min_arg( const workflow_job_type * workflow_job ) { return workflow_job->min_arg; } -int workflow_job_get_max_arg( workflow_job_type * workflow_job ) { +int workflow_job_get_max_arg( const workflow_job_type * workflow_job ) { return workflow_job->max_arg; } +config_item_types workflow_job_iget_argtype( const workflow_job_type * workflow_job, int index) { + return int_vector_iget( workflow_job->arg_types , index ); +} + static void workflow_job_iset_argtype_string( workflow_job_type * workflow_job , int iarg , const char * arg_type) { @@ -206,6 +243,8 @@ static void workflow_job_iset_argtype_string( workflow_job_type * workflow_job , type = CONFIG_INT; else if (strcmp( arg_type , WORKFLOW_JOB_FLOAT_TYPE) == 0) type = CONFIG_FLOAT; + else if (strcmp( arg_type , WORKFLOW_JOB_BOOL_TYPE) == 0) + type = CONFIG_BOOL; if (type != CONFIG_INVALID) workflow_job_iset_argtype( workflow_job , iarg , type ); @@ -214,20 +253,27 @@ static void workflow_job_iset_argtype_string( workflow_job_type * workflow_job , static void workflow_job_validate_internal( workflow_job_type * workflow_job ) { - if ((workflow_job->executable == NULL) && (workflow_job->function != NULL)) { - workflow_job->lib_handle = dlopen( workflow_job->module , RTLD_NOW ); - if (workflow_job->lib_handle != NULL) { - workflow_job->dl_func = (workflow_job_ftype *) dlsym( workflow_job->lib_handle , workflow_job->function ); - if (workflow_job->dl_func != NULL) - workflow_job->valid = true; - else - fprintf(stderr,"Failed to load symbol:%s Error:%s \n",workflow_job->function , dlerror()); + if (workflow_job->executable == NULL) { + if ((workflow_job->internal_script_path == NULL) && (workflow_job->function != NULL)) { + workflow_job->lib_handle = dlopen( workflow_job->module , RTLD_NOW ); + if (workflow_job->lib_handle != NULL) { + workflow_job->dl_func = (workflow_job_ftype *) dlsym( workflow_job->lib_handle , workflow_job->function ); + if (workflow_job->dl_func != NULL) + workflow_job->valid = true; + else + fprintf(stderr,"Failed to load symbol:%s Error:%s \n",workflow_job->function , dlerror()); + } else { + if (workflow_job->module != NULL) + fprintf(stderr,"Failed to load module:%s Error:%s \n",workflow_job->module , dlerror()); + } + } else if ((workflow_job->internal_script_path != NULL) && (workflow_job->function == NULL)) { + workflow_job->valid = true; + } else { + fprintf(stderr, "Must have function != NULL or internal_script != NULL for internal jobs"); + } } else { - if (workflow_job->module != NULL) - fprintf(stderr,"Failed to load module:%s Error:%s \n",workflow_job->module , dlerror()); + fprintf(stderr, "Must have executable == NULL for internal jobs\n"); } - } else - fprintf(stderr,"Must have executable == NULL and function != NULL for internal jobs \n"); } @@ -286,7 +332,11 @@ workflow_job_type * workflow_job_config_alloc( const char * name , config_type * if (config_item_set( config , EXECUTABLE_KEY)) workflow_job_set_executable( workflow_job , config_get_value_as_abspath( config , EXECUTABLE_KEY)); - + + if (config_item_set( config , SCRIPT_KEY)) { + workflow_job_set_internal_script( workflow_job , config_get_value_as_abspath( config , SCRIPT_KEY)); + } + workflow_job_validate( workflow_job ); if (!workflow_job->valid) { @@ -325,15 +375,15 @@ void workflow_job_free__( void * arg) { discard it. */ -static void * workflow_job_run_internal( const workflow_job_type * job , void * self , bool verbose , const stringlist_type * arg) { - return job->dl_func( self , arg ); +static void * workflow_job_run_internal( const workflow_job_type * job, void * self , bool verbose , const stringlist_type * arg) { + return job->dl_func( self , arg ); } -static void * workflow_job_run_external( const workflow_job_type * job , bool verbose , const stringlist_type * arg) { +static void * workflow_job_run_external( const workflow_job_type * job, bool verbose , const stringlist_type * arg) { char ** argv = stringlist_alloc_char_copy( arg ); - util_fork_exec( job->executable , + util_fork_exec( job->executable , stringlist_get_size( arg ), (const char **) argv , true , @@ -342,8 +392,7 @@ static void * workflow_job_run_external( const workflow_job_type * job , bool v NULL , NULL , NULL ); - - + if (argv != NULL) { int i; for (i=0; i < stringlist_get_size( arg ); i++) @@ -353,10 +402,16 @@ static void * workflow_job_run_external( const workflow_job_type * job , bool v return NULL; } - -void * workflow_job_run( const workflow_job_type * job , void * self , bool verbose , const stringlist_type * arg) { - if (job->internal) - return workflow_job_run_internal( job , self , verbose , arg ); - else - return workflow_job_run_external( job , verbose , arg ); +/* This is the old C way and will only be used from the TUI */ +void * workflow_job_run( const workflow_job_type * job, void * self , bool verbose , const stringlist_type * arg) { + if (job->internal) { + if (workflow_job_is_internal_script(job)) { + fprintf(stderr, "*** Can not run internal script workflow jobs using this method: workflow_job_run()\n"); + return NULL; + } else { + return workflow_job_run_internal( job, self, verbose, arg ); + } + } else { + return workflow_job_run_external( job, verbose, arg ); + } } diff --git a/ThirdParty/Ert/devel/libjob_queue/src/workflow_joblist.c b/ThirdParty/Ert/devel/libjob_queue/src/workflow_joblist.c index c81493a94d..215cd50f23 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/workflow_joblist.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/workflow_joblist.c @@ -70,6 +70,11 @@ void workflow_joblist_add_job( workflow_joblist_type * joblist , const workflow_ } +bool workflow_joblist_has_job( const workflow_joblist_type * joblist , const char * job_name) { + workflow_job_type * job = hash_safe_get(joblist->joblist, job_name); + return (NULL != job); +} + bool workflow_joblist_add_job_from_file( workflow_joblist_type * joblist , const char * job_name , const char * config_file ) { workflow_job_type * job = workflow_job_config_alloc( job_name , joblist->job_config , config_file ); if (job) { diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt index 67c7d57e58..797e824333 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt @@ -1,14 +1,14 @@ add_executable( job_loadOK job_loadOK.c ) add_executable( job_loadFail job_loadFail.c ) -add_executable( "create file" create_file.c ) +add_executable( create_file create_file.c ) add_executable( job_workflow_test job_workflow_test.c ) - +add_executable( ext_joblist_test ext_joblist_test.c ) target_link_libraries( job_workflow_test job_queue test_util ) -target_link_libraries( "create file" job_queue test_util ) +target_link_libraries( create_file job_queue test_util ) target_link_libraries( job_loadOK job_queue test_util ) target_link_libraries( job_loadFail job_queue test_util ) - +target_link_libraries( ext_joblist_test job_queue test_util ) add_test( job_workflow_test ${EXECUTABLE_OUTPUT_PATH}/job_workflow_test ${EXECUTABLE_OUTPUT_PATH} ${CMAKE_CURRENT_SOURCE_DIR}/data/internal_job) @@ -21,6 +21,8 @@ add_test( job_loadFail2 ${EXECUTABLE_OUTPUT_PATH}/job_loadFail ${CMAKE_CURRENT_S add_test( job_loadFail3 ${EXECUTABLE_OUTPUT_PATH}/job_loadFail ${CMAKE_CURRENT_SOURCE_DIR}/data/internalFail ${CMAKE_CURRENT_SOURCE_DIR}/data/externalFail) +add_test( ext_joblist_test ${EXECUTABLE_OUTPUT_PATH}/ext_joblist_test ${CMAKE_CURRENT_SOURCE_DIR}/data/jobs/util ${CMAKE_CURRENT_SOURCE_DIR}) + add_executable( job_program_output job_program_output.c ) target_link_libraries( job_program_output util test_util) @@ -74,3 +76,4 @@ target_link_libraries( job_torque_submit_test job_queue util test_util ) file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/data/qsub_emulators/ DESTINATION ${EXECUTABLE_OUTPUT_PATH}) add_test(NAME job_torque_submit_test WORKING_DIRECTORY ${EXECUTABLE_OUTPUT_PATH} COMMAND ${EXECUTABLE_OUTPUT_PATH}/job_torque_submit_test dummyparam) set_property(TEST job_torque_submit_test PROPERTY ENVIRONMENT “setenv PATH ${EXECUTABLE_OUTPUT_PATH}:$PATHâ€) +set_property(TEST ext_joblist_test PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/COPY_FILE b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/COPY_FILE new file mode 100644 index 0000000000..9867a28978 --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/COPY_FILE @@ -0,0 +1,2 @@ +EXECUTABLE /bin/cp +ARGLIST diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/REPLACE b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/REPLACE new file mode 100644 index 0000000000..79e5f19b01 --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/REPLACE @@ -0,0 +1,6 @@ +STDOUT replace.stdout +STDERR replace.stderr + +EXECUTABLE /project/res/x86_64_RH_4/bin/replace.x +ARGLIST + diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/STORE_FILE b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/STORE_FILE new file mode 100644 index 0000000000..0bdb3d3b68 --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/STORE_FILE @@ -0,0 +1,5 @@ +STDOUT store_file.stdout +STDERR store_file.stderr + +EXECUTABLE ../../../Scripts/store_file.py +ARGLIST diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/SYMLINK b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/SYMLINK new file mode 100644 index 0000000000..72ebb65a7c --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/data/jobs/util/SYMLINK @@ -0,0 +1,6 @@ +STDERR SYMLINK.stderr +STDOUT SYMLINK.stdout + +EXECUTABLE /bin/ln +ARGLIST -sf + diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/ext_joblist_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/ext_joblist_test.c new file mode 100644 index 0000000000..1f6a3d2dba --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/ext_joblist_test.c @@ -0,0 +1,35 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ext_joblist_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +void load_job_directory(ext_joblist_type * joblist , const char * path, const char * license_root_path) { + bool user_mode = false; + ext_joblist_add_jobs_in_directory(joblist , path, license_root_path, user_mode ); + test_assert_true( ext_joblist_has_job(joblist, "SYMLINK")); +} + +int main( int argc , char ** argv) { + int status = 0; + ext_joblist_type * joblist = ext_joblist_alloc(); + load_job_directory(joblist , argv[1], argv[2] ); + ext_joblist_free(joblist); + exit( status ); +} diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_job_queue_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_job_queue_test.c index a31efb256a..fb30d56e93 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/job_job_queue_test.c +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_job_queue_test.c @@ -374,7 +374,7 @@ void JobQueueSetMaxDurationRunJobsLoopInThread_Duration5Seconds_KillsAllJobsWith } void JobQueueSetAutoStopTime_ThreeQuickJobs_AutoStopTimeKillsTheRest(char ** argv) { - printf("Running JobQueueSetMaxDurationRunJobsLoopInThread_Duration5Seconds_KillsAllJobsWithDurationMoreThan5Seconds\n"); + printf("Running JobQueueSetAutoStopTime_ThreeQuickJobs_AutoStopTimeKillsTheRest\n"); int number_of_jobs = 10; @@ -391,7 +391,7 @@ void JobQueueSetAutoStopTime_ThreeQuickJobs_AutoStopTimeKillsTheRest(char ** arg thread_pool_type * pool = thread_pool_alloc(1, true); thread_pool_add_job(pool, job_queue_run_jobs__, arg_pack); - int number_of_slowjobs = 3; + int number_of_slowjobs = 7; char * sleep_short = "0"; char * sleep_long = "100"; diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_driver_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_driver_test.c index 00993fdcd5..d9973f5d2c 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_driver_test.c +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_driver_test.c @@ -97,7 +97,8 @@ void get_driver_option_lists() { test_assert_true(stringlist_contains(option_list, TORQUE_NUM_CPUS_PER_NODE)); test_assert_true(stringlist_contains(option_list, TORQUE_NUM_NODES)); test_assert_true(stringlist_contains(option_list, TORQUE_KEEP_QSUB_OUTPUT)); - + test_assert_true(stringlist_contains(option_list, TORQUE_CLUSTER_LABEL)); + stringlist_free(option_list); queue_driver_free(driver_torque); } diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_torque_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_torque_test.c index 10fd68d544..909b923617 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/job_torque_test.c +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_torque_test.c @@ -40,6 +40,8 @@ void setoption_setalloptions_optionsset() { test_option(driver, TORQUE_NUM_NODES, "36"); test_option(driver, TORQUE_KEEP_QSUB_OUTPUT, "1"); test_option(driver, TORQUE_KEEP_QSUB_OUTPUT, "0"); + test_option(driver, TORQUE_CLUSTER_LABEL, "thecluster"); + test_option(driver, TORQUE_JOB_PREFIX_KEY, "coolJob"); printf("Options OK\n"); torque_driver_free(driver); @@ -66,6 +68,8 @@ void getoption_nooptionsset_defaultoptionsreturned() { test_assert_string_equal(torque_driver_get_option(driver, TORQUE_KEEP_QSUB_OUTPUT), "0"); test_assert_string_equal(torque_driver_get_option(driver, TORQUE_NUM_CPUS_PER_NODE), "1"); test_assert_string_equal(torque_driver_get_option(driver, TORQUE_NUM_NODES), "1"); + test_assert_string_equal(torque_driver_get_option(driver, TORQUE_CLUSTER_LABEL), NULL ); + test_assert_string_equal(torque_driver_get_option(driver, TORQUE_JOB_PREFIX_KEY), NULL); printf("Default options OK\n"); torque_driver_free(driver); diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_workflow_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_workflow_test.c index 466ad60ff1..d9e3ed5738 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/job_workflow_test.c +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_workflow_test.c @@ -70,7 +70,7 @@ void * read_file( void * self , const stringlist_type * args) { static void create_exjob( const char * workflow , const char * bin_path) { FILE * stream = util_fopen( workflow , "w"); - fprintf(stream , "EXECUTABLE \"%s/create file\"\n" , bin_path); + fprintf(stream , "EXECUTABLE \"%s/create_file\"\n" , bin_path); fprintf(stream , "ARG_TYPE 1 INT\n"); fprintf(stream , "MIN_ARG 2\n"); fprintf(stream , "MAX_ARG 2\n"); @@ -78,6 +78,17 @@ static void create_exjob( const char * workflow , const char * bin_path) } +void test_has_job(const char * job) { + workflow_joblist_type * joblist = workflow_joblist_alloc(); + test_assert_false( workflow_joblist_has_job( joblist , "NoNotThis")); + + workflow_joblist_add_job_from_file( joblist , "CREATE_FILE" , job); + test_assert_true( workflow_joblist_has_job( joblist , "CREATE_FILE")); + + workflow_joblist_free( joblist ); +} + + int main( int argc , char ** argv) { const char * exjob_file = "job"; const char * bin_path = argv[1]; @@ -86,6 +97,7 @@ int main( int argc , char ** argv) { signal(SIGSEGV , util_abort_signal); create_exjob( exjob_file , bin_path ); + test_has_job( exjob_file ); { int int_value = rand(); @@ -143,6 +155,7 @@ int main( int argc , char ** argv) { test_assert_int_equal( workflow_get_stack_size( workflow ) , 0 ); free( return_value ); + } @@ -170,7 +183,6 @@ int main( int argc , char ** argv) { create_workflow( workflow_file , tmp_file , int_value ); workflow = workflow_alloc(workflow_file , joblist ); unlink( workflow_file ); - test_assert_false( workflow_run( workflow , &read_value , false , NULL) ); test_assert_int_equal( workflow_get_stack_size( workflow ) , 0 ); } diff --git a/ThirdParty/Ert/devel/librms/CMakeLists.txt b/ThirdParty/Ert/devel/librms/CMakeLists.txt index c5e65c48a3..2e88f5e50d 100644 --- a/ThirdParty/Ert/devel/librms/CMakeLists.txt +++ b/ThirdParty/Ert/devel/librms/CMakeLists.txt @@ -1,8 +1,10 @@ add_subdirectory( src ) -if (BUILD_APPLICATONS) +if (BUILD_APPLICATIONS) add_subdirectory( applications ) endif() -#if (BUILD_TESTS) -# add_subdirectory( tests ) -#endif() +if (BUILD_TESTS) + add_subdirectory( tests ) +endif() + + diff --git a/ThirdParty/Ert/devel/librms/applications/CMakeLists.txt b/ThirdParty/Ert/devel/librms/applications/CMakeLists.txt index 4f360d8506..48cbff4f02 100644 --- a/ThirdParty/Ert/devel/librms/applications/CMakeLists.txt +++ b/ThirdParty/Ert/devel/librms/applications/CMakeLists.txt @@ -13,11 +13,8 @@ foreach(prog ${program_list}) endif() #----------------------------------------------------------------- - if (RMS_INSTALL_PREFIX) - set (destination ${RMS_INSTALL_PREFIX}/bin) - else() - set (destination bin) - endif() + + set (destination ${CMAKE_INSTALL_PREFIX}/bin) if (INSTALL_ERT) install(TARGETS ${prog} DESTINATION ${destination}) diff --git a/ThirdParty/Ert/devel/librms/src/rms_file.c b/ThirdParty/Ert/devel/librms/src/rms_file.c index ef0461a24f..26a4f6aa44 100644 --- a/ThirdParty/Ert/devel/librms/src/rms_file.c +++ b/ThirdParty/Ert/devel/librms/src/rms_file.c @@ -284,8 +284,7 @@ rms_tag_type * rms_file_fread_alloc_tag(rms_file_type * rms_file , const char *t } if (tag == NULL) { util_fseek(rms_file->stream , start_pos , SEEK_SET); - fprintf(stderr,"%s: could not find tag: \"%s\" (with %s=%s) in file:%s - aborting.\n",__func__ , tagname , keyname , keyvalue , rms_file->filename); - abort(); + util_abort("%s: could not find tag: \"%s\" (with %s=%s) in file:%s - aborting.\n",__func__ , tagname , keyname , keyvalue , rms_file->filename); } } rms_file_fclose(rms_file); @@ -301,7 +300,7 @@ FILE * rms_file_fopen_r(rms_file_type *rms_file) { FILE * rms_file_fopen_w(rms_file_type *rms_file) { - rms_file->stream = util_fopen(rms_file->filename , "w"); + rms_file->stream = util_mkdir_fopen(rms_file->filename , "w"); return rms_file->stream; } diff --git a/ThirdParty/Ert/devel/librms/src/rms_tag.c b/ThirdParty/Ert/devel/librms/src/rms_tag.c index f21235f726..078fc859df 100644 --- a/ThirdParty/Ert/devel/librms/src/rms_tag.c +++ b/ThirdParty/Ert/devel/librms/src/rms_tag.c @@ -118,7 +118,7 @@ void rms_tag_fread_header(rms_tag_type *tag , FILE *stream , bool *eof_tag) { bool rms_tag_name_eq(const rms_tag_type *tag , const char * tagname , const char *tagkey_name , const char *keyvalue) { bool eq = false; - if (strcmp(tag->name , tagname) == 0) { + if (strcmp(tag->name , tagname) == 0) { if (tagkey_name != NULL && keyvalue != NULL) { if (hash_has_key(tag->key_hash , tagkey_name)) { const rms_tagkey_type *tagkey = hash_get(tag->key_hash , tagkey_name); @@ -167,21 +167,24 @@ int rms_tag_get_datakey_sizeof_ctype(const rms_tag_type * tag) { -static void rms_tag_add_tagkey(const rms_tag_type *tag , const rms_tagkey_type *tagkey, int mem_mode) { +void rms_tag_add_tagkey(rms_tag_type *tag , const rms_tagkey_type *tagkey, int mem_mode) { + rms_tagkey_type * tagkey_copy; switch (mem_mode) { case(COPY): - vector_append_owned_ref( tag->key_list , rms_tagkey_copyc( tagkey ) , rms_tagkey_free_ ); + tagkey_copy = rms_tagkey_copyc(tagkey); + vector_append_owned_ref( tag->key_list , tagkey_copy , rms_tagkey_free_ ); + hash_insert_ref(tag->key_hash , rms_tagkey_get_name(tagkey_copy) , tagkey_copy); break; case(OWNED_REF): vector_append_owned_ref( tag->key_list , tagkey , rms_tagkey_free_ ); + hash_insert_ref(tag->key_hash , rms_tagkey_get_name(tagkey) , tagkey); break; case(SHARED): vector_append_ref( tag->key_list , tagkey ); + hash_insert_ref(tag->key_hash , rms_tagkey_get_name(tagkey) , tagkey); break; } - - hash_insert_ref(tag->key_hash , rms_tagkey_get_name(tagkey) , tagkey); } @@ -207,12 +210,12 @@ static bool rms_tag_at_endtag(FILE *stream) { void rms_fread_tag(rms_tag_type *tag, FILE *stream , hash_type *type_map , bool endian_convert , bool *at_eof) { rms_tag_fread_header(tag , stream , at_eof); if (!*at_eof) { - rms_tagkey_type *tagkey = rms_tagkey_alloc_empty(endian_convert); while (! rms_tag_at_endtag(stream)) { + rms_tagkey_type *tagkey = rms_tagkey_alloc_empty(endian_convert); rms_tagkey_load(tagkey , endian_convert , stream , type_map); rms_tag_add_tagkey(tag , tagkey , COPY); + rms_tagkey_free(tagkey); } - rms_tagkey_free(tagkey); } } @@ -296,7 +299,7 @@ void rms_tag_fwrite_dimensions(int nX , int nY , int nZ , FILE *stream) { void rms_tag_fwrite_parameter(const char *param_name , const rms_tagkey_type *data_key, FILE *stream) { rms_tag_type * tag = rms_tag_alloc("parameter"); - + rms_tag_add_tagkey(tag , rms_tagkey_alloc_parameter_name(param_name) , OWNED_REF); rms_tag_add_tagkey(tag , data_key , SHARED); rms_tag_fwrite(tag , stream); diff --git a/ThirdParty/Ert/devel/librms/tests/CMakeLists.txt b/ThirdParty/Ert/devel/librms/tests/CMakeLists.txt new file mode 100644 index 0000000000..10aa144897 --- /dev/null +++ b/ThirdParty/Ert/devel/librms/tests/CMakeLists.txt @@ -0,0 +1,12 @@ + +add_executable( rms_file_test rms_file_test.c ) +target_link_libraries( rms_file_test rms test_util ) + +add_test( rms_file_test + ${EXECUTABLE_OUTPUT_PATH}/rms_file_test + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/rms_file_test/rms_file) + + + + +set_property( TEST rms_file_test PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/librms/tests/rms_file_test.c b/ThirdParty/Ert/devel/librms/tests/rms_file_test.c new file mode 100644 index 0000000000..adbdc0ba1e --- /dev/null +++ b/ThirdParty/Ert/devel/librms/tests/rms_file_test.c @@ -0,0 +1,57 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'rms_file_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include +#include +#include +#include + +#include +#include + +#include +#include + + + +void test_rms_file_fread_alloc_data_tag(rms_file_type * rms_file) { + rms_tag_type * parameter_tag = rms_file_fread_alloc_tag(rms_file , "parameter" , NULL , NULL); + test_assert_not_NULL(parameter_tag); + test_assert_string_equal("parameter", rms_tag_get_name(parameter_tag)); + rms_tag_free(parameter_tag); +} + + +void test_rms_file_fread_alloc_data_tagkey(rms_file_type *rms_file) { + rms_tagkey_type * name_tagkey = rms_file_fread_alloc_data_tagkey(rms_file , "parameter" , NULL , NULL); + test_assert_not_NULL(name_tagkey); + test_assert_int_equal(rms_float_type, rms_tagkey_get_rms_type(name_tagkey)); + rms_tagkey_free(name_tagkey); +} + + +int main(int argc , char ** argv) { + const char * filename = argv[1]; + rms_file_type * rms_file = rms_file_alloc(filename , false); + test_assert_not_NULL(rms_file); + + test_rms_file_fread_alloc_data_tag(rms_file); + test_rms_file_fread_alloc_data_tagkey(rms_file); + + rms_file_free(rms_file); + exit(0); +} diff --git a/ThirdParty/Ert/devel/python/python/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/CMakeLists.txt index 5f83b699c2..33b4e9454f 100644 --- a/ThirdParty/Ert/devel/python/python/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/CMakeLists.txt @@ -10,4 +10,4 @@ add_subdirectory( ert ) if (ERT_BUILD_GUI) add_subdirectory( ert_gui ) endif() - +add_subdirectory( bin ) diff --git a/ThirdParty/Ert/devel/python/python/ert/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/CMakeLists.txt index 62a56e8e0c..54b06b739d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/CMakeLists.txt @@ -1,18 +1,26 @@ set(PYTHON_SOURCES __init__.py ) - add_python_package("python.ert" ${PYTHON_INSTALL_PREFIX}/ert "${PYTHON_SOURCES}" True) -add_subdirectory(analysis) -add_subdirectory(config) add_subdirectory(cwrap) add_subdirectory(ecl) -add_subdirectory(enkf) add_subdirectory(geo) -add_subdirectory(job_queue) -add_subdirectory(rms) -add_subdirectory(sched) -add_subdirectory(test_run) +add_subdirectory(test) add_subdirectory(util) add_subdirectory(well) + +IF (BUILD_ERT) + set( ERT_SITE_INIT_TARGET "" CACHE FILE "Name of optional external site init module for top level ert package") + if (EXISTS ${ERT_SITE_INIT_TARGET}) + message(STATUS "Using ert site init module: ${ERT_SITE_INIT_TARGET}") + install(FILES ${ERT_SITE_INIT_TARGET} DESTINATION ${PYTHON_INSTALL_PREFIX}/ert RENAME ert_site_init.py) + endif() + add_subdirectory(analysis) + add_subdirectory(config) + add_subdirectory(enkf) + add_subdirectory(job_queue) + add_subdirectory(rms) + add_subdirectory(sched) + add_subdirectory(server) +ENDIF() diff --git a/ThirdParty/Ert/devel/python/python/ert/__init__.py b/ThirdParty/Ert/devel/python/python/ert/__init__.py index 78d1e14454..79326cbdfc 100644 --- a/ThirdParty/Ert/devel/python/python/ert/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/__init__.py @@ -62,6 +62,14 @@ import sys import warnings + + +try: + import ert_site_init +except ImportError: + pass + + required_version_hex = 0x02060000 ert_lib_path = os.getenv("ERT_LIBRARY_PATH") diff --git a/ThirdParty/Ert/devel/python/python/ert/analysis/__init__.py b/ThirdParty/Ert/devel/python/python/ert/analysis/__init__.py index 9cefeb69d2..da2d054a07 100644 --- a/ThirdParty/Ert/devel/python/python/ert/analysis/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/analysis/__init__.py @@ -16,7 +16,7 @@ import ert.cwrap.clib as clib -ANALYSIS_LIB = clib.ert_load("libanalysis.so") +ANALYSIS_LIB = clib.ert_load("libanalysis") from .enums import AnalysisModuleOptionsEnum, AnalysisModuleLoadStatusEnum diff --git a/ThirdParty/Ert/devel/python/python/ert/analysis/analysis_module.py b/ThirdParty/Ert/devel/python/python/ert/analysis/analysis_module.py index b8a6e898fa..39e4dd150d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/analysis/analysis_module.py +++ b/ThirdParty/Ert/devel/python/python/ert/analysis/analysis_module.py @@ -54,6 +54,13 @@ def getDouble(self, var): def getInt(self, var): return AnalysisModule.cNamespace().get_int(self, var) + def getBool(self, var): + return AnalysisModule.cNamespace().get_bool(self, var) + + def getStr(self, var): + test = AnalysisModule.cNamespace().get_str(self, var) + return str(test) + cwrapper = CWrapper(ANALYSIS_LIB) cwrapper.registerType("analysis_module", AnalysisModule) @@ -71,7 +78,8 @@ def getInt(self, var): AnalysisModule.cNamespace().has_var = cwrapper.prototype("bool analysis_module_has_var(analysis_module, char*)") AnalysisModule.cNamespace().get_double = cwrapper.prototype("double analysis_module_get_double(analysis_module, char*)") AnalysisModule.cNamespace().get_int = cwrapper.prototype("int analysis_module_get_int(analysis_module, char*)") - +AnalysisModule.cNamespace().get_bool = cwrapper.prototype("bool analysis_module_get_bool(analysis_module, char*)") +AnalysisModule.cNamespace().get_str = cwrapper.prototype("char* analysis_module_get_ptr(analysis_module, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/config/__init__.py b/ThirdParty/Ert/devel/python/python/ert/config/__init__.py index b748713b09..df9b843d34 100644 --- a/ThirdParty/Ert/devel/python/python/ert/config/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/config/__init__.py @@ -16,9 +16,9 @@ from ert.cwrap import clib import ert.util -CONFIG_LIB = clib.ert_load("libconfig.so") +CONFIG_LIB = clib.ert_load("libconfig") from .unrecognized_enum import UnrecognizedEnum from .content_type_enum import ContentTypeEnum from .config_parser import ConfigParser, SchemaItem, ContentItem, ContentNode -from .config_error import ConfigError \ No newline at end of file +from .config_error import ConfigError diff --git a/ThirdParty/Ert/devel/python/python/ert/config/content_type_enum.py b/ThirdParty/Ert/devel/python/python/ert/config/content_type_enum.py index 4a10991bf4..42a4abe13d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/config/content_type_enum.py +++ b/ThirdParty/Ert/devel/python/python/ert/config/content_type_enum.py @@ -17,12 +17,29 @@ from ert.cwrap import BaseCEnum from ert.config import CONFIG_LIB - class ContentTypeEnum(BaseCEnum): - pass - + CONFIG_STRING = None + CONFIG_INT = None + CONFIG_FLOAT = None + CONFIG_PATH = None + CONFIG_EXISTING_PATH = None + CONFIG_BOOL = None + CONFIG_CONFIG = None + CONFIG_BYTESIZE = None + CONFIG_EXECUTABLE = None + CONFIG_INVALID = None + +ContentTypeEnum.addEnum("CONFIG_STRING", 1) +ContentTypeEnum.addEnum("CONFIG_INT", 2) +ContentTypeEnum.addEnum("CONFIG_FLOAT", 4) +ContentTypeEnum.addEnum("CONFIG_PATH", 8) +ContentTypeEnum.addEnum("CONFIG_EXISTING_PATH", 16) +ContentTypeEnum.addEnum("CONFIG_BOOL", 32) +ContentTypeEnum.addEnum("CONFIG_CONFIG", 64) +ContentTypeEnum.addEnum("CONFIG_BYTESIZE", 128) +ContentTypeEnum.addEnum("CONFIG_EXECUTABLE", 256) +ContentTypeEnum.addEnum("CONFIG_INVALID", 512) -ContentTypeEnum.populateEnum(CONFIG_LIB, "config_schema_item_type_enum_iget") ContentTypeEnum.registerEnum(CONFIG_LIB, "config_content_type_enum") diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/cwrap/CMakeLists.txt index 7a875267c6..7574c9a1b5 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/CMakeLists.txt @@ -2,6 +2,7 @@ set(PYTHON_SOURCES __init__.py basecclass.py basecenum.py + basecvalue.py cclass.py cenum.py cfile.py diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/__init__.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/__init__.py index ec1fd93cec..81fb76ddcf 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/__init__.py @@ -41,6 +41,7 @@ from .cnamespace import CNamespace from .basecclass import BaseCClass +from .basecvalue import BaseCValue from .cclass import CClass from .cenum import create_enum diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py index 87ff7eeba9..c992b1bc04 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py @@ -85,7 +85,9 @@ def __eq__(self, other): super(BaseCClass, self).__eq__(other) def free(self): - raise NotImplementedError("A CClass requires a free method implementation!") + raise NotImplementedError("A BaseCClass requires a free method implementation!") + + def __del__(self): if self.free is not None: @@ -93,4 +95,4 @@ def __del__(self): # Important to check the c_pointer; in the case of failed object creation # we can have a Python object with c_pointer == None. if self.__c_pointer > 0: - self.free() \ No newline at end of file + self.free() diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/basecvalue.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecvalue.py new file mode 100644 index 0000000000..47fd1cdf89 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecvalue.py @@ -0,0 +1,39 @@ +from ctypes import pointer, c_long, c_int, c_bool, c_float, c_double, c_byte, c_short, c_char, c_ubyte, c_ushort, c_uint, c_ulong + +class BaseCValue(object): + DATA_TYPE = None + LEGAL_TYPES = [c_byte, c_ubyte, c_short, c_ushort, c_int, c_uint, c_long, c_ulong, c_bool, c_char, c_float, c_double] + + def __init__(self, value): + super(BaseCValue, self).__init__() + + if not self.DATA_TYPE in self.LEGAL_TYPES: + raise ValueError("DATA_TYPE must be one of these CTypes classes: %s" % BaseCValue.LEGAL_TYPES) + + self.__value = self.cast(value) + + + def value(self): + return self.__value.value + + @classmethod + def type(cls): + return cls.DATA_TYPE + + @classmethod + def cast(cls, value): + return cls.DATA_TYPE(value) + + def setValue(self, value): + self.__value = self.cast(value) + + def asPointer(self): + return pointer(self.__value) + + @classmethod + def from_param(cls, c_value_object): + if c_value_object is not None and not isinstance(c_value_object, BaseCValue): + raise ValueError("c_class_object must be a BaseCValue instance!") + + return c_value_object.__value + diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/clib.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/clib.py index d15bd4ea83..610bb9beaf 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/clib.py +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/clib.py @@ -17,13 +17,20 @@ Convenience module for loading shared library. """ +import platform import ctypes import os ert_lib_path = None +so_extension = {"linux" : "so", + "linux2" : "so", + "linux3" : "so", + "win32" : "dll", + "win64" : "dll", + "darwin" : "dylib" } -def __load__( lib_list, ert_prefix): +def __load( lib_list, ert_prefix): """ Thin wrapper around the ctypes.CDLL function for loading shared library. @@ -38,12 +45,14 @@ def __load__( lib_list, ert_prefix): Will return a handle to the first successfull load, and raise ImportError if none of the loads succeed. """ + error_list = {} dll = None + platform_key = platform.system().lower() for lib in lib_list: try: if ert_prefix: - ert_lib = os.path.join(ert_lib_path, lib) + ert_lib = os.path.join(ert_lib_path , "%s.%s" % (lib , so_extension[ platform_key ])) dll = ctypes.CDLL(ert_lib, ctypes.RTLD_GLOBAL) else: dll = ctypes.CDLL(lib, ctypes.RTLD_GLOBAL) @@ -78,7 +87,7 @@ def load( *lib_list ): """ Will try to load shared library with normal load semantics. """ - return __load__(lib_list, False) + return __load(lib_list , False) def ert_load( *lib_list ): @@ -87,12 +96,16 @@ def ert_load( *lib_list ): load shared library from that path; if that fails the loader will try again without imposing any path restrictions. """ + if ert_lib_path: try: - return __load__(lib_list, True) + return __load(lib_list , True) except ImportError: # Try again - ignoring the ert_lib_path setting. return load(*lib_list) else: # The ert_lib_path variable has not been set; just try a normal load. return load(*lib_list) + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/cwrap.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/cwrap.py index 9471debc03..21323b05e1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/cwrap.py +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/cwrap.py @@ -23,7 +23,8 @@ import ctypes import re import sys -from ert.cwrap import BaseCClass +from ert.cwrap import BaseCClass, BaseCValue +import inspect prototype_pattern = "(?P[a-zA-Z][a-zA-Z0-9_*]*) +(?P[a-zA-Z]\w*) *[(](?P[a-zA-Z0-9_*, ]*)[)]" @@ -34,8 +35,8 @@ class CWrapper: registered_types = {} pattern = re.compile(prototype_pattern) - def __init__( self, lib ): - self.lib = lib + def __init__(self, lib): + self.__lib = lib @classmethod def registerType(cls, type_name, value): @@ -44,6 +45,25 @@ def registerType(cls, type_name, value): # print("Type %s already exists!" % type_name) cls.registered_types[type_name] = value + @classmethod + def registerObjectType(cls, type_name, base_c_class): + """ + Automatically registers a class type with object and reference versions. + For example: + string_list -> StringList + string_list_ref -> StringList.createCReference + string_list_obj -> StringList.createPythonObject + + @type type_name: str + @type base_c_class: BaseCClass + """ + assert issubclass(base_c_class, BaseCClass) + + cls.registerType(type_name, base_c_class) + cls.registerType("%s_ref" % type_name, base_c_class.createCReference) + cls.registerType("%s_obj" % type_name, base_c_class.createPythonObject) + + @classmethod def registerDefaultTypes(cls): """Registers the default available types for prototyping.""" @@ -53,8 +73,8 @@ def registerDefaultTypes(cls): cls.registerType("int*", ctypes.POINTER(ctypes.c_int)) cls.registerType("size_t", ctypes.c_size_t) cls.registerType("size_t*", ctypes.POINTER(ctypes.c_size_t)) - cls.registerType("bool", ctypes.c_int) - cls.registerType("bool*", ctypes.POINTER(ctypes.c_int)) + cls.registerType("bool", ctypes.c_bool) + cls.registerType("bool*", ctypes.POINTER(ctypes.c_bool)) cls.registerType("long", ctypes.c_long) cls.registerType("long*", ctypes.POINTER(ctypes.c_long)) cls.registerType("char", ctypes.c_char) @@ -70,7 +90,7 @@ def __parseType(self, type_name): """Convert a prototype definition type from string to a ctypes legal type.""" type_name = type_name.strip() - if CWrapper.registered_types.has_key(type_name): + if type_name in CWrapper.registered_types: return CWrapper.registered_types[type_name] else: return getattr(ctypes, type_name) @@ -107,16 +127,22 @@ def prototype(self, prototype, lib=None): match = re.match(CWrapper.pattern, prototype) if not match: - sys.stderr.write("Illegal prototype definition: %s\n" % (prototype)) + sys.stderr.write("Illegal prototype definition: %s\n" % prototype) return None else: restype = match.groupdict()["return"] function_name = match.groupdict()["function"] arguments = match.groupdict()["arguments"].split(",") - func = getattr(self.lib, function_name) + func = getattr(self.__lib, function_name) return_type = self.__parseType(restype) + + if inspect.isclass(return_type) and issubclass(return_type, BaseCClass): + sys.stderr.write("BaseCClass can not be used as a return type in prototype definition: %s\n" % prototype) + sys.stderr.write(" Correct return type may be: %s_ref or %s_obj" % (restype, restype)) + return None + func.restype = return_type if hasattr(return_type, "__call__"): @@ -129,6 +155,13 @@ def returnFunction(result, func, arguments): func.errcheck = returnFunction + elif issubclass(return_type, BaseCValue): + func.restype = return_type.type() + + def returnFunction(result, func, arguments): + return return_type(result) + + func.errcheck = returnFunction if len(arguments) == 1 and arguments[0].strip() == "": func.argtypes = [] @@ -140,16 +173,8 @@ def returnFunction(result, func, arguments): return func - def safe_prototype(self, pattern, lib=None): - try: - func = self.prototype(pattern, lib) - except AttributeError: - func = None - sys.stderr.write("****Defunct function call: %s\n" % pattern) - return func - - def print_types(self): + def printTypes(self): for ctype in self.registered_types.keys(): print "%16s -> %s" % (ctype, self.registered_types[ctype]) diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/ecl/CMakeLists.txt index c88f0c1c1b..4864f70634 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/CMakeLists.txt @@ -8,6 +8,7 @@ set(PYTHON_SOURCES ecl_grav_calc.py ecl_grid.py ecl_kw.py + ecl_npv.py ecl_queue.py ecl_region.py ecl_rft.py @@ -33,8 +34,11 @@ if (EXISTS ${ECL_LOCAL_TARGET}) endif() EXECUTE_PROCESS( COMMAND ${CMAKE_COMMAND} -E create_symlink "${ECL_LOCAL_TARGET}" "${CMAKE_CURRENT_SOURCE_DIR}/ecl_local.py") + message(STATUS "Linking ${CMAKE_CURRENT_SOURCE_DIR}/ecl_local.py -> ${ECL_LOCAL_TARGET}") endif() if (EXISTS "${CMAKE_CURRENT_SOURCE_DIR}/ecl_local.py") add_python_package( "Python ert.ecl.ecl_local" ${PYTHON_INSTALL_PREFIX}/ert/ecl "ecl_local.py" True) endif() + +add_subdirectory(faults) diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py b/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py index d56d96410e..4ae8117193 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py @@ -76,7 +76,7 @@ -ECL_LIB = clib.ert_load("libecl.so") +ECL_LIB = clib.ert_load("libecl") from .ecl_sum import EclSum #, EclSumVector, EclSumNode, EclSMSPECNode from .ecl_util import EclFileEnum, EclFileFlagEnum, EclPhaseEnum, EclTypeEnum, EclUtil @@ -90,9 +90,9 @@ from .ecl_region import EclRegion from .ecl_subsidence import EclSubsidence from .ecl_grav_calc import phase_deltag, deltag -from .ecl_queue import EclQueue from .ecl_sum_node import EclSumNode from .ecl_sum_vector import EclSumVector +from .ecl_npv import EclNPV , NPVPriceVector #from .ecl_queue import diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_case.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_case.py index 9afa6cb2fb..d49c01d141 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_case.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_case.py @@ -21,7 +21,8 @@ """ import os import warnings -from ert.ecl import EclRFTFile, EclGrid, EclSum, EclUtil, EclDefault, EclQueue +from ert.ecl import EclRFTFile, EclGrid, EclSum, EclUtil, EclDefault +from ert.ecl.ecl_queue import EclQueue @@ -225,4 +226,4 @@ def submit( self , queue ): @type queue: EclQueue """ - queue.submitDatafile( self.datafile ) + queue.submitDataFile( self.datafile ) diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_file.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_file.py index 64fa5e7bdd..707c83b25a 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_file.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_file.py @@ -40,7 +40,7 @@ import datetime from ert.cwrap import CClass, CWrapper, CWrapperNameSpace from ert.ecl import EclKW, ECL_LIB -from ert.util import ctime +from ert.util import CTime class EclFile(CClass): @@ -66,7 +66,7 @@ class method it is possible to load only one report obj = EclFile( filename ) if dtime: - OK = cfunc.restart_block_time( obj , ctime( dtime )) + OK = cfunc.restart_block_time( obj , CTime( dtime )) elif not report_step is None: OK = cfunc.restart_block_step( obj , report_step ) else: @@ -273,7 +273,7 @@ def select_restart_section( self, index = None , report_step = None , sim_time = if report_step: OK = cfunc.restart_block_step( self , report_step ) elif sim_time: - OK = cfunc.restart_block_time( self , ctime( sim_time ) ) + OK = cfunc.restart_block_time( self , CTime( sim_time ) ) elif index: OK = cfunc.restart_block_iselect( self, index ) else: @@ -439,18 +439,20 @@ def iget_named_kw( self , kw_name , index , copy = False): [1]: For working with summary data you are probably better off using the EclSum class. """ - kw_c_ptr = cfunc.iget_named_kw( self , kw_name , index ) - ecl_kw = EclKW.wrap( kw_c_ptr , parent = self , data_owner = False) + if index < self.num_named_kw( kw_name ): + kw_c_ptr = cfunc.iget_named_kw( self , kw_name , index ) + ecl_kw = EclKW.wrap( kw_c_ptr , parent = self , data_owner = False) - if copy: - return EclKW.copy( ecl_kw ) + if copy: + return EclKW.copy( ecl_kw ) + else: + return ecl_kw else: - return ecl_kw + raise KeyError("Asked for occurence:%d of keyword:%s - max:%d" % (index , kw_name , self.num_named_kw( kw_name ))) def restart_get_kw( self , kw_name , dtime , copy = False): - """ - Will return EclKW @kw_name from restart file at time @dtime. + """Will return EclKW @kw_name from restart file at time @dtime. This function assumes that the current EclFile instance represents a restart file. It will then look for keyword @@ -466,18 +468,25 @@ def restart_get_kw( self , kw_name , dtime , copy = False): out of scope. If the optional argument @copy is True the returned kw will be a true copy. - If the file does not have the keyword at the specified time the - function will return None. + If the file does not have the keyword at the specified time + the function will raise IndexError(); if the file does not + have the keyword at all - KeyError will be raised. """ - index = cfunc.get_restart_index( self , ctime( dtime ) ) + index = cfunc.get_restart_index( self , CTime( dtime ) ) if index >= 0: - kw = self.iget_named_kw( kw_name , index ) - if copy: - return EclKW.copy( kw ) + if self.num_named_kw(kw_name) > index: + kw = self.iget_named_kw( kw_name , index ) + if copy: + return EclKW.copy( kw ) + else: + return kw else: - return kw + if self.has_kw(kw_name): + raise IndexError("Does not have keyword:%s at time:%s" % (kw_name , dtime)) + else: + raise KeyError("Key:%s not recognized" % kw_name) else: - return None + raise IndexError("Does not have keyword:%s at time:%s" % (kw_name , dtime)) def replace_kw( self , old_kw , new_kw): @@ -657,7 +666,7 @@ def has_sim_time( self , dtime ): keyword(s), but is still not a restart file. The @dtime argument should be a normal python datetime instance. """ - return cfunc.has_sim_time( self , ctime(dtime) ) + return cfunc.has_sim_time( self , CTime(dtime) ) def iget_restart_sim_time( self , index ): @@ -665,8 +674,8 @@ def iget_restart_sim_time( self , index ): Will locate restart block nr @index and return the true time as a datetime instance. """ - ctime = cfunc.iget_restart_time( self , index ) - return ctime.datetime() + ct = CTime(cfunc.iget_restart_time( self , index )) + return ct.datetime() def iget_restart_sim_days( self , index ): diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_grid.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_grid.py index c2822f8832..b3794c03f5 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_grid.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_grid.py @@ -27,6 +27,7 @@ import numpy import sys +import warnings from ert.cwrap import CClass, CFILE, CWrapper, CWrapperNameSpace from ert.ecl import EclTypeEnum, EclKW, ECL_LIB @@ -93,13 +94,13 @@ def __new__(cls , filename , lgr = None , parent = None): raise IOError("Loading grid from:%s failed" % filename) - def equal(self , other , include_lgr = True , verbose = False): + def equal(self , other , include_lgr = True , include_nnc = False , verbose = False): """ Compare the current grid with the other grid. """ if not isinstance(other , EclGrid): raise TypeError("The other argument must be an EclGrid instance") - return cfunc.equal( self , other , include_lgr , verbose) + return cfunc.equal( self , other , include_lgr , include_nnc , verbose) @property def dual_grid( self ): @@ -125,7 +126,7 @@ def nz( self ): @property def size( self ): """The total number of cells in the grid, i.e. nx*ny*nz.""" - return cfunc.get_nx( self ) * cfunc.get_ny( self ) * cfunc.get_nz( self ) + return cfunc.get_global_size( self ) @property def nactive( self ): @@ -146,6 +147,46 @@ def dims( self ): cfunc.get_nz( self ) , cfunc.get_active( self ) ) + def getNX(self): + """ The number of elements in the x direction""" + return cfunc.get_nx( self ) + + def getNY(self): + """ The number of elements in the y direction""" + return cfunc.get_ny( self ) + + def getNZ(self): + """ The number of elements in the z direction""" + return cfunc.get_nz( self ) + + def getGlobalSize(self): + """Returns the total number of cells in this grid""" + return cfunc.get_global_size( self ) + + def getBoundingBox2D(self , layer = 0): + if 0 <= layer <= self.getNZ(): + x = ctypes.c_double() + y = ctypes.c_double() + z = ctypes.c_double() + + cfunc.get_corner_xyz( self , 0 , 0 , layer , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z) ) + p0 = (x.value , y.value ) + + cfunc.get_corner_xyz( self , self.getNX() , 0 , layer , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z) ) + p1 = (x.value , y.value ) + + cfunc.get_corner_xyz( self , self.getNX() , self.getNY() , layer , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z) ) + p2 = (x.value , y.value ) + + cfunc.get_corner_xyz( self , 0 , self.getNY() , layer , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z) ) + p3 = (x.value , y.value ) + + return (p0,p1,p2,p3) + else: + raise ValueError("Invalid layer value:%d Valid range: [0,%d]" % (layer , self.getNZ())) + + + @property def name( self ): """ @@ -193,8 +234,24 @@ def __global_index( self , active_index = None , global_index = None , ijk = Non if not active_index is None: global_index = cfunc.get_global_index1A( self , active_index ) elif ijk: + nx = self.getNX() + ny = self.getNY() + nz = self.getNZ() + + + if not 0 <= ijk[0] < nx: + raise IndexError("Invalid value i:%d Range: [%d,%d)" % (ijk[0] , 0 , nx)) + + if not 0 <= ijk[1] < ny: + raise IndexError("Invalid value j:%d Range: [%d,%d)" % (ijk[1] , 0 , ny)) + + if not 0 <= ijk[2] < nz: + raise IndexError("Invalid value k:%d Range: [%d,%d)" % (ijk[2] , 0 , nz)) + global_index = cfunc.get_global_index3( self , ijk[0] , ijk[1] , ijk[2]) - + else: + if not 0 <= global_index < self.size: + raise IndexError("Invalid value global_index:%d Range: [%d,%d)" % (global_index , 0 , self.size)) return global_index @@ -323,8 +380,37 @@ def get_xyz( self, active_index = None , global_index = None , ijk = None): return (x.value , y.value , z.value) + def getNodePos(self , i , j , k): + """Will return the (x,y,z) for the node given by (i,j,k). - def get_corner_xyz(self, corner_nr , active_index = None , global_index = None , ijk = None): + Observe that this method does not consider cells, but the + nodes in the grid. This means that the valid input range for + i,j and k are are upper end inclusive. To get the four + bounding points of the lower layer of the grid: + + p0 = grid.getNodePos(0 , 0 , 0) + p1 = grid.getNodePos(grid.getNX() , 0 , 0) + p2 = grid.getNodePos(0 , grid.getNY() , 0) + p3 = grid.getNodePos(grid.getNX() , grid.getNY() , 0) + + """ + if not 0 <= i <= self.getNX(): + raise IndexError("Invalid I value:%d - valid range: [0,%d]" % (i , self.getNX())) + + if not 0 <= j <= self.getNY(): + raise IndexError("Invalid J value:%d - valid range: [0,%d]" % (j , self.getNY())) + + if not 0 <= k <= self.getNZ(): + raise IndexError("Invalid K value:%d - valid range: [0,%d]" % (k , self.getNZ())) + + x = ctypes.c_double() + y = ctypes.c_double() + z = ctypes.c_double() + cfunc.get_corner_xyz( self , i,j,k , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z)) + return (x.value , y.value , z.value) + + + def getCellCorner(self , corner_nr , active_index = None , global_index = None , ijk = None): """ Will look up xyz of corner nr @corner_nr @@ -340,10 +426,43 @@ def get_corner_xyz(self, corner_nr , active_index = None , global_index = None , x = ctypes.c_double() y = ctypes.c_double() z = ctypes.c_double() - cfunc.get_xyz1_corner( self , gi , corner_nr , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z)) + cfunc.get_cell_corner_xyz1( self , gi , corner_nr , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z)) return (x.value , y.value , z.value) + def get_corner_xyz(self, corner_nr , active_index = None , global_index = None , ijk = None): + warnings.warn("The get_corner_xyz() method has been renamed: getCellCorner()" , DeprecationWarning) + return self.getCellCorner(corner_nr , active_index , global_index , ijk) + + + def getLayerXYZ(self , xy_corner , layer): + nx = self.getNX() + ny = self.getNY() + nz = self.getNZ() + + (j , i) = divmod(xy_corner , nx + 1) + k = layer + corner = 0 + + if i == nx: + i -= 1 + corner += 1 + + if j == ny: + j -= 1 + corner += 2 + + if k == nz: + k -= 1 + corner += 4 + + if cfunc.ijk_valid( self , i , j , k): + return self.get_corner_xyz( corner , global_index = i + j*nx + k*nx*ny ) + else: + raise IndexError("Invalid coordinates: (%d,%d,%d) " % (i,j,k)) + + + def distance( self , global_index1 , global_index2): dx = ctypes.c_double() dy = ctypes.c_double() @@ -432,6 +551,19 @@ def cell_contains( self , x , y , z , active_index = None , global_index = None return cfunc.cell_contains( self , gi , x,y,z) + def cell_regular(self, active_index = None , global_index = None , ijk = None): + """ + The ECLIPSE grid models often contain various degenerate cells, + which are twisted, have overlapping corners or what not. This + function gives a moderate sanity check on a cell, essentially + what the function does is to check if the cell contains it's + own centerpoint - which is actually not as trivial as it + sounds. + """ + gi = self.__global_index( ijk = ijk , active_index = active_index , global_index = global_index) + return cfunc.cell_regular( self , gi ) + + def cell_volume( self, active_index = None , global_index = None , ijk = None): """ Calculate the volume of a cell. @@ -734,9 +866,11 @@ def write_grdecl( self , ecl_kw , pyfile , special_header = None , default_value cfunc.get_nx = cwrapper.prototype("int ecl_grid_get_nx( ecl_grid )") cfunc.get_ny = cwrapper.prototype("int ecl_grid_get_ny( ecl_grid )") cfunc.get_nz = cwrapper.prototype("int ecl_grid_get_nz( ecl_grid )") +cfunc.get_global_size = cwrapper.prototype("int ecl_grid_get_global_size( ecl_grid )") cfunc.get_active = cwrapper.prototype("int ecl_grid_get_active_size( ecl_grid )") cfunc.get_active_fracture = cwrapper.prototype("int ecl_grid_get_nactive_fracture( ecl_grid )") cfunc.get_name = cwrapper.prototype("char* ecl_grid_get_name( ecl_grid )") +cfunc.ijk_valid = cwrapper.prototype("bool ecl_grid_ijk_valid(ecl_grid , int , int , int)") cfunc.get_active_index3 = cwrapper.prototype("int ecl_grid_get_active_index3( ecl_grid , int , int , int)") cfunc.get_global_index3 = cwrapper.prototype("int ecl_grid_get_global_index3( ecl_grid , int , int , int)") cfunc.get_active_index1 = cwrapper.prototype("int ecl_grid_get_active_index1( ecl_grid , int )") @@ -747,10 +881,12 @@ def write_grdecl( self , ecl_kw , pyfile , special_header = None , default_value cfunc.get_ijk1A = cwrapper.prototype("void ecl_grid_get_ijk1A( ecl_grid , int , int* , int* , int*)") cfunc.get_xyz3 = cwrapper.prototype("void ecl_grid_get_xyz3( ecl_grid , int , int , int , double* , double* , double*)") cfunc.get_xyz1 = cwrapper.prototype("void ecl_grid_get_xyz1( ecl_grid , int , double* , double* , double*)") -cfunc.get_xyz1_corner = cwrapper.prototype("void ecl_grid_get_corner_xyz1( ecl_grid , int , int , double* , double* , double*)") +cfunc.get_cell_corner_xyz1 = cwrapper.prototype("void ecl_grid_get_cell_corner_xyz1( ecl_grid , int , int , double* , double* , double*)") +cfunc.get_corner_xyz = cwrapper.prototype("void ecl_grid_get_corner_xyz( ecl_grid , int , int , int, double* , double* , double*)") cfunc.get_xyz1A = cwrapper.prototype("void ecl_grid_get_xyz1A( ecl_grid , int , double* , double* , double*)") cfunc.get_ijk_xyz = cwrapper.prototype("int ecl_grid_get_global_index_from_xyz( ecl_grid , double , double , double , int)") cfunc.cell_contains = cwrapper.prototype("bool ecl_grid_cell_contains_xyz1( ecl_grid , int , double , double , double )") +cfunc.cell_regular = cwrapper.prototype("bool ecl_grid_cell_regular1( ecl_grid , int)") cfunc.num_lgr = cwrapper.prototype("int ecl_grid_get_num_lgr( ecl_grid )") cfunc.has_lgr = cwrapper.prototype("bool ecl_grid_has_lgr( ecl_grid , char* )") cfunc.grid_value = cwrapper.prototype("double ecl_grid_get_property( ecl_grid , ecl_kw , int , int , int)") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py index 613cd9e383..70744f1338 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py @@ -71,7 +71,7 @@ class EclKW(CClass): limit the operation to a part of the EclKW. """ - int_kw_set = set( ["PVTNUM" , "FIPNUM" , "EQLNUM" , "FLUXNUM" , "MULTNUM" , "ACTNUM" , "SPECGRID"] ) + int_kw_set = set( ["PVTNUM" , "FIPNUM" , "EQLNUM" , "FLUXNUM" , "MULTNUM" , "ACTNUM" , "SPECGRID" , "REGIONS"] ) @classmethod def add_int_kw(cls , kw): @@ -542,6 +542,30 @@ def __div__(self , factor): # No __rdiv__() + def sum(self): + """ + Will calculate the sum of all the elements in the keyword. + + String: Raise ValueError exception. + Bool: The number of true values + """ + if self.ecl_type == EclTypeEnum.ECL_CHAR_TYPE: + raise ValueError("The keyword:%s is of string type - sum is not implemented" % self.get_name()) + elif self.ecl_type == EclTypeEnum.ECL_INT_TYPE: + return cfunc.int_sum( self ) + elif self.ecl_type == EclTypeEnum.ECL_FLOAT_TYPE: + return cfunc.float_sum( self ) + elif self.ecl_type == EclTypeEnum.ECL_DOUBLE_TYPE: + return cfunc.float_sum( self ) + elif self.ecl_type == EclTypeEnum.ECL_BOOL_TYPE: + sum = 0 + for elm in self: + if elm: + sum += 1 + return sum + + + def assert_binary( self , other ): """ Utility function to assert that keywords @self and @other can @@ -746,22 +770,6 @@ def get_name( self ): name = property( get_name , set_name ) - @property - def type( self ): - # enum ecl_type_enum from ecl_util.h - if self.ecl_type == EclTypeEnum.ECL_CHAR_TYPE: - return "CHAR" - if self.ecl_type == EclTypeEnum.ECL_FLOAT_TYPE: - return "REAL" - if self.ecl_type == EclTypeEnum.ECL_DOUBLE_TYPE: - return "DOUB" - if self.ecl_type == EclTypeEnum.ECL_INT_TYPE: - return "INTE" - if self.ecl_type == EclTypeEnum.ECL_BOOL_TYPE: - return "BOOL" - if self.ecl_type == EclTypeEnum.ECL_MESS_TYPE: - return "MESS" - @property def min_max( self ): @@ -811,11 +819,18 @@ def numeric(self): @property def type( self ): - return self.ecl_type + return self.getEclType() @property def type_name( self ): + return self.typeName( ) + + def typeName(self): return EclUtil.type_name( self.ecl_type ) + + def getEclType(self): + return self.ecl_type + @property def header( self ): @@ -994,6 +1009,8 @@ def fprintf_data( self , file , fmt = None): cfunc.get_header = cwrapper.prototype("char* ecl_kw_get_header ( ecl_kw )") cfunc.set_header = cwrapper.prototype("void ecl_kw_set_header_name ( ecl_kw , char*)") +cfunc.int_sum = cwrapper.prototype("int ecl_kw_element_sum_int( ecl_kw )") +cfunc.float_sum = cwrapper.prototype("double ecl_kw_element_sum_float( ecl_kw )") cfunc.iadd = cwrapper.prototype("void ecl_kw_inplace_add( ecl_kw , ecl_kw )") cfunc.imul = cwrapper.prototype("void ecl_kw_inplace_mul( ecl_kw , ecl_kw )") cfunc.idiv = cwrapper.prototype("void ecl_kw_inplace_div( ecl_kw , ecl_kw )") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_npv.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_npv.py new file mode 100644 index 0000000000..95232fe158 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_npv.py @@ -0,0 +1,206 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'ecl_npv.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import re +import datetime +import numbers +from ert.ecl import EclSum + + +class NPVParseKey(object): + def __init__(self , eclNPV): + self.baseCase = eclNPV.baseCase + self.NPV = eclNPV + + + def __call__(self , matchObject): + key = matchObject.group(1) + smspecNode = self.baseCase.smspec_node( key ) + if smspecNode.is_total: + var = key.replace(":" , "_") + self.NPV.addKey( key , var ) + return var + "[i]" + else: + raise ValueError("Sorry - the key: %s is not a total key - aborting" % key) + + +class NPVPriceVector(object): + def __init__(self, argList): + self.dateList = [] + if isinstance(argList , list): + for item in argList: + if isinstance(item , tuple) and len(item) == 2: + self.addItem(item) + else: + raise ValueError("Each element in list must be tuple with two elements") + else: + raise ValueError("Constructor argument must be list") + + + + def addItem(self , item): + dateItem = item[0] + try: + year = dateItem.year + month = dateItem.month + day = dateItem.day + date = datetime.date( year , month , day ) + except AttributeError: + try: + tmp = re.split("[ .-/]" , dateItem) + day = int(tmp[0]) + month = int(tmp[1]) + year = int(tmp[2]) + + date = datetime.date( year , month , day) + except Exception: + raise ValueError("First element was invalid date item") + + + if len(self.dateList): + prevItem = self.dateList[-1] + if prevItem[0] >= date: + raise ValueError("The dates must be in a strictly increasing order") + + value = item[1] + if isinstance(value , numbers.Real) or callable(value): + self.dateList.append( (date , value) ) + else: + raise ValueError("The value argument must be a scalar number or callable") + + @classmethod + def assertDate(cls , date): + try: + year = date.year + month = date.month + day = date.day + date = datetime.date( year , month , day ) + + return date + except AttributeError: + return date.date() + + + + def evalDate(self , dateItem , date): + value = dateItem[1] + if callable(value): + td = date - dateItem[0] + return value(td.days) + else: + return value + + + def eval(self , date): + date = self.assertDate( date ) + startDate = self.dateList[0][0] + if date >= startDate: + endDate = self.dateList[-1][0] + if date >= endDate: + return self.evalDate( self.dateList[-1] , date) + else: + index1 = 0 + index2 = len(self.dateList) - 1 + while True: + if (index2 - index1) == 1: + index = index1 + break + + index = (index1 + index2) >> 1 + item = self.dateList[index] + if date >= item[0]: + index1 = index + else: + index2 = index + return self.evalDate( self.dateList[index] , date) + else: + raise ValueError("Input date:%s before start of vector" % date) + + + + + +class EclNPV(object): + sumKeyRE = re.compile("[[]([\w:,]+)[]]") + + + def __init__(self , baseCase): + sum = EclSum( baseCase ) + if sum: + self.baseCase = sum + else: + raise Error("Failed to open ECLIPSE sumamry case:%s" % baseCase) + self.expression = None + self.keyList = {} + self.start = None + self.end = None + self.interval = "1Y" + + + def eval(self): + if self.expression is None: + raise ValueError("Can not eval with an expression to evaluate") + pass + + + def getExpression(self): + return self.expression + + + def setExpression(self , expression): + self.compiled_expr = self.compile( expression ) + self.expression = expression + + + def getKeyList(self): + return self.keyList.keys() + + + def addKey(self , key , var): + self.keyList[key] = var + + + def parseExpression(self , expression): + self.keyList = {} + if expression.count("[") != expression.count("]"): + raise ValueError("Expression:%s invalid - not matching [ and ]" % expression) + + replaceKey = NPVParseKey( self ) + parsedExpression = self.sumKeyRE.sub( replaceKey , expression ) + return parsedExpression + + + def compile(self , expression): + parsedExpression = self.parseExpression( expression ) + self.code = "trange = self.baseCase.timeRange( self.start , self.end , self.interval)\n" + for (key,var) in self.keyList.items(): + self.code += "%s = self.baseCase.blockedProduction( \"%s\" , trange )\n" % (var , key) + + self.code += "npv = 0\n" + self.code += """ +for i in range(len(trange) - 1): + npv += %s +varDict[\"npv\"] = npv +""" % parsedExpression + + + + def evalNPV(self): + byteCode = compile( self.code , "" , 'exec') + varDict = {} + eval(byteCode) + return varDict["npv"] + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_region.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_region.py index 57a4b2ff78..b7bc88fe10 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_region.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_region.py @@ -92,6 +92,9 @@ def __init__(self , grid , preselect , c_ptr = None): self.init_cobj( c_ptr , cfunc.free ) + def __eq__(self , other): + return cfunc.equal(self , other) + def __deep_copy__(self , memo): """ @@ -632,7 +635,7 @@ def deselect_above_plane( self , n , p): See method 'select_above_plane' for further documentation. """ - (n_vec , p_vec) = self.__init_plane_deselect( n , p ) + (n_vec , p_vec) = self.__init_plane_select( n , p ) cfunc.deselect_above_plane( self , n_vec , p_vec ) def deselect_below_plane( self , n , p): @@ -641,7 +644,7 @@ def deselect_below_plane( self , n , p): See method 'select_above_plane' for further documentation. """ - (n_vec , p_vec) = self.__init_plane_deselect( n , p ) + (n_vec , p_vec) = self.__init_plane_select( n , p ) cfunc.deselect_below_plane( self , n_vec , p_vec ) @select_method @@ -656,7 +659,7 @@ def select_inside_polygon( self , points , intersect = False): (100,100) the @points list should be: points = [(0,0) , (0,100) , (100,100) , (100,0)] - + The elements in the points list should be (utm_x, utm_y) values. These values will be compared with the centerpoints of the cells in the grid. The selection is based the top k=0 @@ -675,7 +678,7 @@ def select_outside_polygon( self , points , intersect = False): """ cfunc.select_outside_polygon( self , GeoPolygon( points )) - def deselect_outside_polygon( self , points ): + def deselect_inside_polygon( self , points ): """ Will select all points outside polygon. @@ -802,27 +805,34 @@ def ecl_region_instance( self ): """ return True - + + def getActiveList(self): + active_list = cfunc.get_active_list(self) + active_list.setParent(self) + return active_list + + + def getGlobalList(self): + global_list = cfunc.get_global_list(self) + global_list.setParent(self) + return global_list + @property def active_list(self): """ IntVector instance with active indices in the region. """ - c_ptr = cfunc.get_active_list( self ) - active_list = IntVector.asPythonReference( c_ptr , self ) - return active_list + return self.getActiveList() + @property def global_list(self): """ IntVector instance with global indices in the region. """ - # c_ptr = cfunc.get_global_list( self ) - # global_list = IntVector.asPythonReference( c_ptr , self ) - global_list = cfunc.get_global_list(self) - global_list.setParent(self) - return global_list + return self.getGlobalList() + @property def active_size( self ): @@ -863,7 +873,7 @@ def contains_active( self , active_index): def kw_index_list(self , ecl_kw , force_active): c_ptr = cfunc.get_kw_index_list( self , ecl_kw , force_active) - index_list = IntVector.asPythonReference( c_ptr , self ) + index_list = IntVector.createCReference( c_ptr, self ) return index_list @@ -917,6 +927,7 @@ def get_name( self ): cfunc.scale_kw_double = cwrapper.prototype("void ecl_region_scale_kw_double( ecl_region , ecl_kw , double , bool) ") cfunc.select_box = cwrapper.prototype("void ecl_region_select_from_ijkbox(ecl_region , int , int , int , int , int , int)") +cfunc.deselect_box = cwrapper.prototype("void ecl_region_deselect_from_ijkbox(ecl_region , int , int , int , int , int , int)") cfunc.imul_kw = cwrapper.prototype("void ecl_region_kw_imul( ecl_region , ecl_kw , ecl_kw , bool)") cfunc.idiv_kw = cwrapper.prototype("void ecl_region_kw_idiv( ecl_region , ecl_kw , ecl_kw , bool)") @@ -931,7 +942,7 @@ def get_name( self ): cfunc.xor = cwrapper.prototype("void ecl_region_xor( ecl_region , ecl_region )") cfunc.get_kw_index_list = cwrapper.prototype("c_void_p ecl_region_get_kw_index_list( ecl_region , ecl_kw , bool )") -cfunc.get_active_list = cwrapper.prototype("c_void_p ecl_region_get_active_list( ecl_region )") +cfunc.get_active_list = cwrapper.prototype("int_vector_ref ecl_region_get_active_list( ecl_region )") cfunc.get_global_list = cwrapper.prototype("int_vector_ref ecl_region_get_global_list( ecl_region )") cfunc.get_active_global = cwrapper.prototype("c_void_p ecl_region_get_global_active_list( ecl_region )") @@ -972,10 +983,10 @@ def get_name( self ): cfunc.deselect_above_plane = cwrapper.prototype("void ecl_region_deselect_above_plane( ecl_region, double* , double* )") cfunc.deselect_below_plane = cwrapper.prototype("void ecl_region_deselect_below_plane( ecl_region, double* , double* )") -cfunc.select_inside_polygon = cwrapper.prototype("void ecl_region_select_inside_polygon( ecl_region , double* , double* , int )") -cfunc.select_outside_polygon = cwrapper.prototype("void ecl_region_select_outside_polygon( ecl_region , double* , double* , int )") -cfunc.deselect_inside_polygon = cwrapper.prototype("void ecl_region_deselect_inside_polygon( ecl_region , double* , double* , int )") -cfunc.deselect_outside_polygon = cwrapper.prototype("void ecl_region_deselect_outside_polygon( ecl_region , double* , double* , int )") +cfunc.select_inside_polygon = cwrapper.prototype("void ecl_region_select_inside_polygon( ecl_region , geo_polygon)") +cfunc.select_outside_polygon = cwrapper.prototype("void ecl_region_select_outside_polygon( ecl_region , geo_polygon)") +cfunc.deselect_inside_polygon = cwrapper.prototype("void ecl_region_deselect_inside_polygon( ecl_region , geo_polygon)") +cfunc.deselect_outside_polygon = cwrapper.prototype("void ecl_region_deselect_outside_polygon( ecl_region , geo_polygon)") cfunc.set_name = cwrapper.prototype("void ecl_region_set_name( ecl_region , char*)") cfunc.get_name = cwrapper.prototype("char* ecl_region_get_name( ecl_region )") @@ -984,3 +995,4 @@ def get_name( self ): cfunc.contains_global = cwrapper.prototype("void ecl_region_contains_global( ecl_region, int )") cfunc.contains_active = cwrapper.prototype("void ecl_region_contains_active( ecl_region , int )") +cfunc.equal = cwrapper.prototype("bool ecl_region_equal( ecl_region , ecl_region )") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_rft.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_rft.py index 1544a1b96d..465f757fc4 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_rft.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_rft.py @@ -21,7 +21,7 @@ import warnings from ert.cwrap import CClass, CWrapper, CWrapperNameSpace from ert.ecl import EclRFTCell, EclPLTCell, ECL_LIB -from ert.util import ctime +from ert.util import CTime class EclRFTFile(CClass): @@ -50,21 +50,20 @@ def __new__( cls , case ): def __len__(self): - return cfunc_file.get_size( self , None , -1) + return cfunc_file.get_size( self , None , CTime(-1)) - def __getitem__(self , index): - if isinstance( index , types.IntType): - length = self.__len__() - if index < 0 or index >= length: - raise IndexError + def __getitem__(self, index): + if isinstance(index, int): + if 0 <= index < len(self): + return EclRFT( cfunc_file.iget(self, index), self) else: - return EclRFT( cfunc_file.iget( self , index ) , self ) + raise IndexError("Index '%d' must be in range: [0, %d]" % (index, len(self) - 1)) else: - raise TypeError("Index should be integer type") + raise TypeError("Index must be integer type") - def size( self , well = None , date = None): + def size(self, well=None, date=None): """ The number of elements in EclRFTFile container. @@ -81,9 +80,9 @@ def size( self , well = None , date = None): """ if date: - cdate = ctime( date ) + cdate = CTime( date ) else: - cdate = -1 + cdate = CTime( -1 ) return cfunc_file.get_size( self , well , cdate) @@ -101,7 +100,7 @@ def headers(self): Returns a list of two tuples (well_name , date) for the whole file. """ header_list = [] - for i in (range(cfunc_file.get_size( self , None , -1))): + for i in (range(cfunc_file.get_size( self , None , CTime(-1)))): rft = self.iget( i ) header_list.append( (rft.well , rft.date) ) return header_list @@ -120,7 +119,7 @@ def get(self , well_name , date ): Returns None if no matching RFT can be found. """ - c_ptr = cfunc_file.get_rft( self , well_name , ctime( date )) + c_ptr = cfunc_file.get_rft( self , well_name , CTime( date )) if c_ptr: return EclRFT( c_ptr , self) else: @@ -207,7 +206,8 @@ def date(self): """ The date when this RFT/PLT/... was recorded. """ - return cfunc_rft.get_date( self ) + ct = CTime(cfunc_rft.get_date( self )) + return ct.date() @property def size(self): diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py index 3fc033aefd..2ccb8a7238 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py @@ -21,6 +21,10 @@ libecl/src directory. """ + +import numpy +import datetime + # Observe that there is some convention conflict with the C code # regarding order of arguments: The C code generally takes the time # index as the first argument and the key/key_index as second @@ -28,10 +32,9 @@ from ert.cwrap import BaseCClass, CWrapper from ert.ecl.ecl_sum_vector import EclSumVector from ert.ecl.ecl_smspec_node import EclSMSPECNode -from ert.util import StringList, ctime, DoubleVector, TimeVector +from ert.util import StringList, CTime, DoubleVector, TimeVector, IntVector from ert.ecl import ECL_LIB -import numpy #import ert.ecl_plot.sum_plot as sum_plot @@ -42,7 +45,6 @@ # implementation could be replaced with: # # from matplotlib.dates import date2num -from ert.util.tvector import TimeVector HOURS_PER_DAY = 24.0 @@ -95,10 +97,28 @@ def __init__(self, load_case , join_string = ":" , include_restart = True): try to load summary results also from the restarted case. """ c_pointer = EclSum.cNamespace().fread_alloc( load_case , join_string , include_restart) - assert c_pointer is not None - super(EclSum, self).__init__(c_pointer) + if c_pointer is None: + raise AssertionError("Failed to create summary instance from argument:%s" % load_case) + else: + super(EclSum, self).__init__(c_pointer) + self._initialize() - self._initialize() + + @staticmethod + def writer(case , start_time , nx,ny,nz , fmt_output = False , unified = True , key_join_string = ":"): + """ + The writer is not generally usable. + """ + return EclSum.cNamespace().create_writer( case , fmt_output , unified , key_join_string , CTime(start_time) , nx , ny , nz) + + + def addVariable(self , variable , wgname = None , num = 0 , unit = "None" , default_value = 0): + EclSum.cNamespace().add_variable(self , variable , wgname , num , unit , default_value) + + + def addTStep(self , report_step , sim_days): + tstep = EclSum.cNamespace().add_tstep( self , report_step , sim_days ) + return tstep def _initialize(self): @@ -112,26 +132,37 @@ def _initialize(self): for i in range(length): self.__days[i] = EclSum.cNamespace().iget_sim_days(self, i) - self.__dates[i] = EclSum.cNamespace().iget_sim_time(self, i).datetime() + self.__dates[i] = self.iget_date( i ) self.__report_step[i] = EclSum.cNamespace().iget_report_step(self, i) self.__mini_step[i] = EclSum.cNamespace().iget_mini_step(self, i) self.__mpl_dates[i] = date2num(self.__dates[i]) index_list = self.report_index_list() - length = len(index_list) + + length = len(index_list) - index_list.count(-1) self.__datesR = [0] * length self.__report_stepR = numpy.zeros(length, dtype=numpy.int32) self.__mini_stepR = numpy.zeros(length, dtype=numpy.int32) self.__daysR = numpy.zeros(length) self.__mpl_datesR = numpy.zeros(length) - for i in range(length): - time_index = index_list[i] - self.__daysR[i] = EclSum.cNamespace().iget_sim_days(self, time_index) - self.__datesR[i] = EclSum.cNamespace().iget_sim_time(self, time_index).datetime() - self.__report_stepR[i] = EclSum.cNamespace().iget_report_step(self, time_index) - self.__mini_stepR[i] = EclSum.cNamespace().iget_mini_step(self, time_index) - self.__mpl_datesR[i] = date2num(self.__datesR[i]) + # Slightly hysterical heuristics to accomoate for the + # situation where there are holes in the report steps series; + # when a report step is completely missing there will be -1 + # entries in the index_list. + i1 = 0 + for i0 in range(length): + while True: + time_index = index_list[i1] + if time_index >= 0: + break + i1 += 1 + + self.__daysR[i0] = EclSum.cNamespace().iget_sim_days(self, time_index) + self.__datesR[i0] = self.iget_date(time_index) + self.__report_stepR[i0] = EclSum.cNamespace().iget_report_step(self, time_index) + self.__mini_stepR[i0] = EclSum.cNamespace().iget_mini_step(self, time_index) + self.__mpl_datesR[i0] = date2num(self.__datesR[i0]) def get_vector( self , key , report_only = False): @@ -141,10 +172,11 @@ def get_vector( self , key , report_only = False): Will raise exception KeyError if the summary object does not have @key. """ - if self.has_key( key ): - return EclSumVector( self , key , report_only ) + self.assertKeyValid(key) + if report_only: + return EclSumVector( self , key, report_only = True) else: - raise KeyError("Summary object does not have key: %s" % key) + return EclSumVector( self , key) def report_index_list( self ): @@ -153,7 +185,7 @@ def report_index_list( self ): """ first_report = self.first_report last_report = self.last_report - index_list = [] + index_list = IntVector() for report_step in range( first_report , last_report + 1): time_index = EclSum.cNamespace().get_report_end( self , report_step ) index_list.append( time_index ) @@ -261,7 +293,7 @@ def get_last( self , key ): return self[key].last - def iiget(self , key_index , time_index): + def iiget(self , time_index , key_index): """ Lookup a summary value based on naive @time_index and @key_index. @@ -295,6 +327,25 @@ def iget(self , key , time_index): return EclSum.cNamespace().get_general_var( self , time_index , key ) + def __len__(self): + """ + The number of timesteps in the dataset; the return when evaluating + len(case). + + """ + return EclSum.cNamespace().data_length( self ) + + + def __contains__(self , key): + if EclSum.cNamespace().has_key( self, key ): + return True + else: + return False + + def assertKeyValid(self , key): + if not key in self: + raise KeyError("The summary key:%s was not recognized" % key) + def __getitem__(self , key): """ Implements [] operator - @key should be a summary key. @@ -308,7 +359,7 @@ def check_sim_time( self , date): """ Will check if the input date is in the time span [sim_start , sim_end]. """ - return EclSum.cNamespace().check_sim_time( self , ctime(date) ) + return EclSum.cNamespace().check_sim_time( self , CTime(date) ) def get_interp( self , key , days = None , date = None): @@ -325,22 +376,89 @@ def get_interp( self , key , days = None , date = None): Also available as method get_interp() on the EclSumVector class. """ - if days: - if date: - raise ValueError("Must supply either days or date") - else: - if EclSum.cNamespace().check_sim_days( self , days ): - return EclSum.cNamespace().get_general_var_from_sim_days( self , days , key ) - else: - raise ValueError("days:%s is outside range of simulation: [%g,%g]" % (days , self.first_day , self.sim_length)) - elif date: + self.assertKeyValid( key ) + if days is None and date is None: + raise ValueError("Must supply either days or date") + + if days is None: if self.check_sim_time( date ): - return EclSum.cNamespace().get_general_var_from_sim_time( self , ctime(date) , key ) + return EclSum.cNamespace().get_general_var_from_sim_time( self , CTime(date) , key ) else: raise ValueError("date:%s is outside range of simulation data" % date) + elif date is None: + if EclSum.cNamespace().check_sim_days( self , days ): + return EclSum.cNamespace().get_general_var_from_sim_days( self , days , key ) + else: + raise ValueError("days:%s is outside range of simulation: [%g,%g]" % (days , self.first_day , self.sim_length)) else: raise ValueError("Must supply either days or date") + + def timeRange(self , start = None , end = None , interval = "1Y"): + (num , timeUnit) = TimeVector.parseTimeUnit( interval ) + + if start is None: + start = self.start_time + if isinstance(start , datetime.date): + start = datetime.datetime( start.year , start.month , start.day , 0 , 0 , 0 ) + + if end is None: + end = self.end_time + if isinstance(end , datetime.date): + end = datetime.datetime( end.year , end.month , end.day , 0 , 0 , 0 ) + + if end < start: + raise ValueError("Invalid time interval start after end") + + + if not timeUnit == "d": + year1 = start.year + year2 = end.year + month1 = start.month + month2 = end.month + day1 = start.day + day2 = end.day + + if timeUnit == 'm': + if day2 > 1: + month2 += 1 + if month2 == 13: + year2 += 1 + month2 = 1 + elif timeUnit == "y": + month1 = 1 + if year2 > 1 or day2 > 1: + year2 += 1 + month2 = 1 + day1 = 1 + day2 = 1 + start = datetime.date( year1, month1 , day1) + end = datetime.date(year2 , month2 , day2) + + trange = TimeVector.createRegular(start , end , interval) + if trange[-1] < end: + trange.appendTime( num , timeUnit ) + return trange + + + + def blockedProduction(self , totalKey , timeRange): + node = self.smspec_node(totalKey) + if node.is_total: + total = DoubleVector() + for t in timeRange: + if t < CTime(self.start_time): + total.append( 0 ) + elif t >= CTime( self.end_time): + total.append( self.get_last_value( totalKey )) + else: + total.append( self.get_interp( totalKey , date = t )) + tmp = total << 1 + total.pop() + return tmp - total + else: + raise TypeError("The blockedProduction method must be called with one of the TOTAL keys like e.g. FOPT or GWIT") + def get_report( self , date = None , days = None): """ @@ -353,7 +471,7 @@ def get_report( self , date = None , days = None): if date: if days: raise ValueError("Must supply either days or date") - step = EclSum.cNamespace().get_report_step_from_time( self , ctime(date)) + step = EclSum.cNamespace().get_report_step_from_time( self , CTime(date)) elif days: step = EclSum.cNamespace().get_report_step_from_days( self , days) @@ -364,8 +482,7 @@ def get_report_time( self , report): """ Will return the datetime corresponding to the report_step @report. """ - ctime = EclSum.cNamespace().get_report_time( self , report ) - return ctime.date() + return CTime( EclSum.cNamespace().get_report_time( self , report ) ).date() def get_interp_vector( self , key , days_list = None , date_list = None): @@ -382,6 +499,7 @@ def get_interp_vector( self , key , days_list = None , date_list = None): Also available as method get_interp_vector() on the EclSumVector class. """ + self.assertKeyValid(key) if days_list: if date_list: raise ValueError("Must supply either days_list or date_list") @@ -401,9 +519,11 @@ def get_interp_vector( self , key , days_list = None , date_list = None): end_time = self.end_date vector = numpy.zeros( len(date_list )) index = 0 + for date in date_list: - if (date >= start_time) and (date <= end_time): - vector[index] = EclSum.cNamespace().get_general_var_from_sim_time( self , ctime(date) , key) + ct = CTime(date) + if start_time <= ct <= end_time: + vector[index] = EclSum.cNamespace().get_general_var_from_sim_time( self , ct , key) else: raise ValueError("Invalid date value") index += 1 @@ -424,7 +544,7 @@ def has_key( self , key): """ Check if summary object has key @key. """ - return EclSum.cNamespace().has_key( self, key ) + return key in self def smspec_node( self , key ): @@ -624,9 +744,13 @@ def iget_days(self , time_index): def iget_date(self , time_index): """ - Returns the simulation date for element nr @time_index. + Returns the simulation date for element nr @t +ime_index. """ - return EclSum.cNamespace().iget_sim_time( self , time_index ).datetime() + long_time = EclSum.cNamespace().iget_sim_time( self , time_index ) + ct = CTime(long_time) + return ct.datetime() + def iget_report( self , time_index ): """ @@ -671,24 +795,25 @@ def start_date(self): returned start_date might be different from the datetime of the first (loaded) timestep. """ - ctime = EclSum.cNamespace().get_start_date( self ) - return ctime.date() + ct = EclSum.cNamespace().get_start_date( self ) + return CTime(ct).date() + @property def end_date(self): """ The date of the last (loaded) time step. """ - ctime = EclSum.cNamespace().get_end_date( self ) - return ctime.date() + return CTime( EclSum.cNamespace().get_end_date( self ) ).date() + + @property def data_start(self): """ The first date we have data for. """ - ctime = EclSum.cNamespace().get_data_start( self ) - return ctime.date() + return CTime( EclSum.cNamespace().get_data_start( self ) ).datetime() @property @@ -698,16 +823,14 @@ def start_time(self): See start_date() for further details. """ - ctime = EclSum.cNamespace().get_start_date( self ) - return ctime.datetime() + return CTime( EclSum.cNamespace().get_start_date( self ) ).datetime() @property def end_time(self): """ The time of the last (loaded) time step. """ - ctime = EclSum.cNamespace().get_end_date( self ) - return ctime.datetime() + return CTime(EclSum.cNamespace().get_end_date( self )).datetime() @property def last_report(self): @@ -862,3 +985,6 @@ def createPythonObject(cls, c_pointer): EclSum.cNamespace().create_well_list = cwrapper.prototype("stringlist_obj ecl_sum_alloc_well_list( ecl_sum , char* )") EclSum.cNamespace().create_group_list = cwrapper.prototype("stringlist_obj ecl_sum_alloc_group_list( ecl_sum , char* )") +EclSum.cNamespace().create_writer = cwrapper.prototype("ecl_sum_obj ecl_sum_alloc_writer( char* , bool , bool , char* , time_t , int , int , int)") +EclSum.cNamespace().add_variable = cwrapper.prototype("void ecl_sum_add_var(ecl_sum , char* , char* , int , char*, double)") +EclSum.cNamespace().add_tstep = cwrapper.prototype("c_void_p ecl_sum_add_tstep(ecl_sum , int , double)") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum_vector.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum_vector.py index 6dd570b9b3..ea7173ac15 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum_vector.py @@ -1,8 +1,9 @@ +import warnings from ert.ecl.ecl_sum_node import EclSumNode class EclSumVector: - def __init__(self, parent, key, report_only): + def __init__(self, parent, key, report_only = False): """ A summary vector with a vector of values and time. @@ -22,6 +23,9 @@ def __init__(self, parent, key, report_only): self.parent = parent self.key = key self.report_only = report_only + + if report_only: + warnings.warn("The report_only flag to the EclSumVector will be removed" , DeprecationWarning) self.__dates = parent.get_dates(report_only) self.__days = parent.get_days(report_only) diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/CMakeLists.txt new file mode 100644 index 0000000000..c073c435cc --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/CMakeLists.txt @@ -0,0 +1,13 @@ +set(PYTHON_SOURCES + __init__.py + fault_block.py + fault_block_layer.py + fault_collection.py + fault.py + fault_line.py + fault_segments.py + region_definition.py + layer.py +) + +add_python_package("python.ert.ecl.faults" ${PYTHON_INSTALL_PREFIX}/ert/ecl/faults "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/__init__.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/__init__.py new file mode 100644 index 0000000000..afa4256198 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/__init__.py @@ -0,0 +1,8 @@ +from .layer import Layer +from .fault_collection import FaultCollection +from .fault import Fault +from .fault_line import FaultLine +from .fault_segments import FaultSegment , SegmentMap +from .fault_block import FaultBlock , FaultBlockCell +from .fault_block_layer import FaultBlockLayer +from .region_definition import RegionDefinition diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault.py new file mode 100644 index 0000000000..1e60834720 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault.py @@ -0,0 +1,199 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from .fault_line import FaultLine +from .fault_segments import FaultSegment , SegmentMap +from ert.ecl import EclTypeEnum + +class Layer(object): + def __init__(self, grid , K): + self.__grid = grid + self.__K = K + self.__fault_lines = [] + self.__segment_map = SegmentMap() + self.__processed = False + + + def addSegment(self , segment): + self.__segment_map.addSegment( segment ) + self.__processed = False + + def __len__(self): + self.processSegments() + return len(self.__fault_lines) + + def __iter__(self): + self.processSegments() + return iter(self.__fault_lines) + + def __getitem__(self , index): + self.processSegments() + return self.__fault_lines[index] + + def getK(self): + return self.__K + + + def getNeighborCells(self): + neighbor_cells = [] + for fl in self: + neighbor_cells += fl.getNeighborCells() + return neighbor_cells + + + def processSegments(self): + if self.__processed: + return + + while self.__segment_map: + fault_line = FaultLine(self.__grid , self.__K) + self.__fault_lines.append( fault_line ) + + current_segment = self.__segment_map.popStart() + while current_segment: + append = fault_line.tryAppend(current_segment) + if not append: + fault_line = FaultLine(self.__grid , self.__K) + self.__fault_lines.append( fault_line ) + fault_line.tryAppend(current_segment) + + current_segment.next_segment = self.__segment_map.popNext( current_segment ) + current_segment = current_segment.next_segment + + self.__processed = True + + +################################################################# + + +class Fault(object): + allowed_faces = ["X","Y","Z","I","J","K","X-","Y-","Z-","I-","J-","K-"] + + def __init__(self, grid , name): + self.__grid = grid + self.__name = name + self.__layer_map = {} + self.__layer_list = [] + (self.nx , self.ny , self.nz , nactive) = grid.dims + + + def __str__(self): + return "Fault:%s" % self.__name + + def __getitem__(self , K): + layer = self.__layer_map[K] + return layer + + def __len__(self): + return len(self.__layer_map) + + + def __iter__(self): + for layer in self.__layer_list: + yield layer + + + def hasLayer(self , K): + return self.__layer_map.has_key( K ) + + + def addLayer(self , K): + layer = Layer(self.__grid , K) + self.__layer_map[K] = layer + self.__layer_list.append( layer ) + + + def createSegment(self , I1 , I2 , J1 , J2 , face): + if face in ["X" , "I"]: + C1 = I1 + 1 + J1*(self.nx + 1) + C2 = C1 + (1 + J2 - J1) * (self.nx + 1) + elif face in ["X-" , "I-"]: + C1 = I1 + J1*(self.nx + 1) + C2 = C1 + (1 + J2 - J1) * (self.nx + 1) + elif face in ["Y" , "J"]: + C1 = I1 + (J1 + 1) * (self.nx + 1) + C2 = C1 + (1 + I2 - I1) + elif face in ["Y-" , "J-"]: + C1 = I1 + J1 * (self.nx + 1) + C2 = C1 + (1 + I2 - I1) + else: + raise Exception("Can only handle X,Y faces") + + return FaultSegment(C1,C2) + + + + def addRecord(self , I1 , I2 , J1 , J2 , K1 , K2 , face): + if not face in Fault.allowed_faces: + raise ValueError("Invalid face:%s" % face) + + if I1 > I2: + raise ValueError("Invalid I1 I2 indices") + + if J1 > J2: + raise ValueError("Invalid J1 J2 indices") + + if K1 > K2: + raise ValueError("Invalid K1 K2 indices") + + if I1 < 0 or I1 >= self.nx: + raise ValueError("Invalid I1:%d" % I1) + if I2 < 0 or I2 >= self.nx: + raise ValueError("Invalid I2:%d" % I2) + + if J1 < 0 or J1 >= self.ny: + raise ValueError("Invalid J1:%d" % J1) + if J2 < 0 or J2 >= self.ny: + raise ValueError("Invalid J2:%d" % J2) + + if K1 < 0 or K1 >= self.nz: + raise ValueError("Invalid K1:%d" % K1) + if K2 < 0 or K2 >= self.nz: + raise ValueError("Invalid K2:%d" % K2) + + if face in ["X","I"]: + if I1 != I2: + raise ValueError("For face:%s we must have I1 == I2" % face) + + if face in ["Y","J"]: + if J1 != J2: + raise ValueError("For face:%s we must have J1 == J2" % face) + + if face in ["Z","K"]: + if K1 != K2: + raise ValueError("For face:%s we must have K1 == K2" % face) + + #----------------------------------------------------------------- + + for K in range(K1,K2+1): + if not self.hasLayer(K): + self.addLayer(K) + layer = self.__layer_map[K] + segment = self.createSegment(I1,I2,J1,J2,face) + layer.addSegment( segment ) + + + def getName(self): + return self.__name + + + def getNeighborCells(self): + neighbor_cells = [] + for layer in self: + neighbor_cells += layer.getNeighborCells() + return neighbor_cells + + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block.py new file mode 100644 index 0000000000..84a5536f09 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block.py @@ -0,0 +1,170 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_block.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import ctypes +from ert.cwrap import BaseCClass, CWrapper +from ert.geo import Polyline, GeometryTools +from ert.util import DoubleVector , IntVector +from ert.ecl import ECL_LIB + + +class FaultBlockCell(object): + def __init__(self , i,j,k ,x,y,z): + + self.i = i + self.j = j + self.k = k + + self.x = x + self.y = y + self.z = z + + + def __str__(self): + return "(%d,%d)" % (self.i , self.j) + + + +class FaultBlock(BaseCClass): + + def __init__(self , *args , **kwargs): + raise NotImplementedError("Class can not be instantiated directly!") + + + def __getitem__(self , index): + if isinstance(index, int): + if index < 0: + index += len(self) + + if 0 <= index < len(self): + x = ctypes.c_double() + y = ctypes.c_double() + z = ctypes.c_double() + + i = ctypes.c_int() + j = ctypes.c_int() + k = ctypes.c_int() + + self.cNamespace().export_cell(self , index , ctypes.byref(i) , ctypes.byref(j) , ctypes.byref(k) , ctypes.byref(x) , ctypes.byref(y) , ctypes.byref(z)) + return FaultBlockCell( i.value , j.value , k.value , x.value , y.value , z.value ) + else: + raise IndexError("Index:%d out of range: [0,%d)" % (index , len(self))) + else: + raise TypeError("Index:%s wrong type - integer expected") + + def __str__(self): + return "Block ID: %d" % self.getBlockID() + + + def __len__(self): + return self.cNamespace().get_size( self ) + + def free(self): + self.cNamespace().free(self) + + def getCentroid(self): + xc = self.cNamespace().get_xc( self ) + yc = self.cNamespace().get_yc( self ) + return (xc,yc) + + + def countInside(self , polygon): + """ + Will count the number of points in block which are inside polygon. + """ + inside = 0 + for p in self: + if GeometryTools.pointInPolygon( (p.x , p.y) , polygon ): + inside += 1 + + return inside + + + def getBlockID(self): + return self.cNamespace().get_block_id(self) + + + def assignToRegion(self , region_id): + self.cNamespace().assign_to_region(self , region_id) + + + def getRegionList(self): + regionList = self.cNamespace().get_region_list(self) + return regionList.copy() + + def addCell(self, i , j): + self.cNamespace().add_cell( self , i , j ) + + def getGlobalIndexList(self): + return self.cNamespace().get_global_index_list( self ) + + + def getEdgePolygon(self): + x_list = DoubleVector() + y_list = DoubleVector() + self.cNamespace().trace_edge( self , x_list , y_list ) + p = Polyline() + for (x,y) in zip(x_list , y_list): + p.addPoint(x,y) + return p + + + def containsPolyline(self, polyline): + """ + Will return true if at least one point from the polyline is inside the block. + """ + edge_polyline = self.getEdgePolygon() + for p in polyline: + if GeometryTools.pointInPolygon( p , edge_polyline ): + return True + return False + + + def getNeighbours(self): + """ + Will return a list of FaultBlock instances which are in direct + contact with this block. + """ + neighbour_id_list = IntVector() + self.cNamespace().get_neighbours( self , neighbour_id_list ) + + parent_layer = self.getParentLayer() + neighbour_list = [] + for id in neighbour_id_list: + neighbour_list.append( parent_layer.getBlock( id )) + return neighbour_list + + + def getParentLayer(self): + return self.parent() + + + +cwrapper = CWrapper(ECL_LIB) +CWrapper.registerObjectType("fault_block", FaultBlock) + +FaultBlock.cNamespace().get_xc = cwrapper.prototype("double fault_block_get_xc(fault_block)") +FaultBlock.cNamespace().get_yc = cwrapper.prototype("double fault_block_get_yc(fault_block)") +FaultBlock.cNamespace().get_block_id = cwrapper.prototype("int fault_block_get_id(fault_block)") +FaultBlock.cNamespace().get_size = cwrapper.prototype("int fault_block_get_size(fault_block)") +FaultBlock.cNamespace().export_cell = cwrapper.prototype("void fault_block_export_cell(fault_block , int , int* , int* , int* , double* , double* , double*)") +FaultBlock.cNamespace().assign_to_region = cwrapper.prototype("void fault_block_assign_to_region(fault_block , int)") +FaultBlock.cNamespace().get_region_list = cwrapper.prototype("int_vector_ref fault_block_get_region_list(fault_block)") +FaultBlock.cNamespace().add_cell = cwrapper.prototype("void fault_block_add_cell(fault_block, int , int)") +FaultBlock.cNamespace().get_global_index_list = cwrapper.prototype("int_vector_ref fault_block_get_global_index_list(fault_block)") +FaultBlock.cNamespace().trace_edge = cwrapper.prototype("void fault_block_trace_edge( fault_block, double_vector , double_vector)") +FaultBlock.cNamespace().get_neighbours = cwrapper.prototype("void fault_block_list_neighbours( fault_block , int_vector)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_collection.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_collection.py new file mode 100644 index 0000000000..5ad5b4976e --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_collection.py @@ -0,0 +1,80 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_block_collection.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + + +from ert.cwrap import BaseCClass, CWrapper +from ert.ecl import ECL_LIB + + +class FaultBlockCollection(BaseCClass): + + def __init__(self , grid): + c_pointer = self.cNamespace().alloc( grid) + if c_pointer: + super(FaultBlockCollection, self).__init__(c_pointer) + else: + raise ValueError("Invalid input - failed to create FaultBlockCollection") + + # The underlying C implementation uses lazy evaluation and + # needs to hold on to the grid reference. We therefor take + # references to it here, to protect against premature garbage + # collection. + self.grid_ref = grid + + + def __len__(self): + return self.cNamespace().num_layers(self) + + + def __getitem__(self , index): + """ + @rtype: FaultBlockLayer + """ + if isinstance(index, int): + if 0 <= index < len(self): + return self.cNamespace().get_layer( self , index ).setParent(self) + else: + raise IndexError("Index:%d out of range [0,%d)" % (index , len(self))) + else: + raise TypeError("Index should be integer type") + + + def getLayer(self , k): + """ + @rtype: FaultBlockLayer + """ + return self[k] + + def free(self): + self.cNamespace().free(self) + + + def scanKeyword(self , fault_block_kw): + ok = self.cNamespace().scan_keyword( self , fault_block_kw ) + if not ok: + raise ValueError("The fault block keyword had wrong type/size") + + + +cwrapper = CWrapper(ECL_LIB) +CWrapper.registerObjectType("fault_block_collection", FaultBlockCollection) + + +FaultBlockCollection.cNamespace().alloc = cwrapper.prototype("c_void_p fault_block_collection_alloc(ecl_grid )") +FaultBlockCollection.cNamespace().free = cwrapper.prototype("void fault_block_collection_free(fault_block_collection)") +FaultBlockCollection.cNamespace().num_layers = cwrapper.prototype("int fault_block_collection_num_layers(fault_block_collection)") +FaultBlockCollection.cNamespace().get_layer = cwrapper.prototype("fault_block_layer_ref fault_block_collection_get_layer(fault_block_collection, int)") +FaultBlockCollection.cNamespace().scan_keyword = cwrapper.prototype("bool fault_block_collection_scan_kw(fault_block_collection, ecl_kw)") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_layer.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_layer.py new file mode 100644 index 0000000000..1e5c2a98ec --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_block_layer.py @@ -0,0 +1,151 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_block_layer.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + + +from ert.cwrap import BaseCClass, CWrapper +from ert.ecl import ECL_LIB +from ert.ecl import EclTypeEnum + +class FaultBlockLayer(BaseCClass): + + def __init__(self , grid , k): + c_pointer = self.cNamespace().alloc( grid , k) + if c_pointer: + super(FaultBlockLayer, self).__init__(c_pointer) + else: + raise ValueError("Invalid input - failed to create FaultBlockLayer") + + # The underlying C implementation uses lazy evaluation and + # needs to hold on to the grid reference. We therefor take + # references to it here, to protect against premature garbage + # collection. + self.grid_ref = grid + + + def __len__(self): + return self.cNamespace().size(self) + + + def __getitem__(self , index): + """ + @rtype: FaultBlock + """ + if isinstance(index, int): + if index < 0: + index += len(self) + + if 0 <= index < len(self): + return self.cNamespace().iget_block( self , index ).setParent(self) + else: + raise IndexError("Index:%d out of range: [0,%d)" % (index , len(self))) + else: + raise TypeError("Index should be integer type") + + def __contains__(self , block_id): + return self.cNamespace().has_block( self , block_id) + + + def scanKeyword(self , fault_block_kw): + """ + Will reorder the block ids, and ensure single connectedness. Assign block_id to zero blocks. + """ + ok = self.cNamespace().scan_keyword( self , fault_block_kw ) + if not ok: + raise ValueError("The fault block keyword had wrong type/size: type:%s size:%d grid_size:%d" % (fault_block_kw.typeName() , len(fault_block_kw) , self.grid_ref.getGlobalSize())) + + + def loadKeyword(self , fault_block_kw): + """ + Will load directly from keyword - without reorder; ignoring zero. + """ + ok = self.cNamespace().load_keyword( self , fault_block_kw ) + if not ok: + raise ValueError("The fault block keyword had wrong type/size: type:%s size:%d grid_size:%d" % (fault_block_kw.typeName() , len(fault_block_kw) , self.grid_ref.getGlobalSize())) + + + def getBlock(self , block_id): + """ + @rtype: FaultBlock + """ + if block_id in self: + return self.cNamespace().get_block( self , block_id).setParent(self) + else: + raise KeyError("No blocks with ID:%d in this layer" % block_id) + + + def deleteBlock(self , block_id): + if block_id in self: + self.cNamespace().del_block( self , block_id) + else: + raise KeyError("No blocks with ID:%d in this layer" % block_id) + + def addBlock(self , block_id = None): + if block_id is None: + block_id = self.getNextID() + + if block_id in self: + raise KeyError("Layer already contains block with ID:%s" % block_id) + else: + return self.cNamespace().add_block( self , block_id).setParent(self) + + def getNextID(self): + return self.cNamespace().get_next_id( self ) + + + def getK(self): + return self.cNamespace().getK( self ) + + + def free(self): + self.cNamespace().free(self) + + + def scanLayer( self , layer): + self.cNamespace().scan_layer(self , layer) + + + def insertBlockContent(self , block): + self.cNamespace().insert_block_content(self , block) + + def exportKeyword(self , kw): + if len(kw) != self.grid_ref.getGlobalSize(): + raise ValueError("The size of the target keyword must be equal to the size of the grid. Got:%d Expected:%d" % (len(kw) , self.grid_ref.getGlobalSize())) + + if kw.getEclType() != EclTypeEnum.ECL_INT_TYPE: + raise TypeError("The target kewyord must be of integer type") + + self.cNamespace().export_kw( self , kw ) + + +cwrapper = CWrapper(ECL_LIB) +CWrapper.registerObjectType("fault_block_layer", FaultBlockLayer) + + +FaultBlockLayer.cNamespace().alloc = cwrapper.prototype("c_void_p fault_block_layer_alloc(ecl_grid , int)") +FaultBlockLayer.cNamespace().free = cwrapper.prototype("void fault_block_layer_free(fault_block_layer)") +FaultBlockLayer.cNamespace().size = cwrapper.prototype("int fault_block_layer_get_size(fault_block_layer)") +FaultBlockLayer.cNamespace().iget_block = cwrapper.prototype("fault_block_ref fault_block_layer_iget_block(fault_block_layer, int)") +FaultBlockLayer.cNamespace().add_block = cwrapper.prototype("fault_block_ref fault_block_layer_add_block(fault_block_layer, int)") +FaultBlockLayer.cNamespace().get_block = cwrapper.prototype("fault_block_ref fault_block_layer_get_block(fault_block_layer, int)") +FaultBlockLayer.cNamespace().del_block = cwrapper.prototype("void fault_block_layer_del_block(fault_block_layer, int)") +FaultBlockLayer.cNamespace().has_block = cwrapper.prototype("bool fault_block_layer_has_block(fault_block_layer, int)") +FaultBlockLayer.cNamespace().scan_keyword = cwrapper.prototype("bool fault_block_layer_scan_kw(fault_block_layer, ecl_kw)") +FaultBlockLayer.cNamespace().load_keyword = cwrapper.prototype("bool fault_block_layer_load_kw(fault_block_layer, ecl_kw)") +FaultBlockLayer.cNamespace().getK = cwrapper.prototype("int fault_block_layer_get_k(fault_block_layer)") +FaultBlockLayer.cNamespace().get_next_id = cwrapper.prototype("int fault_block_layer_get_next_id(fault_block_layer)") +FaultBlockLayer.cNamespace().scan_layer = cwrapper.prototype("void fault_block_layer_scan_layer( fault_block_layer , layer)") +FaultBlockLayer.cNamespace().insert_block_content = cwrapper.prototype("void fault_block_layer_insert_block_content( fault_block_layer , fault_block)") +FaultBlockLayer.cNamespace().export_kw = cwrapper.prototype("bool fault_block_layer_export( fault_block_layer , ecl_kw )") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_collection.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_collection.py new file mode 100644 index 0000000000..ac4f74224b --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_collection.py @@ -0,0 +1,116 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_collection.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import re +from .fault import Fault + +comment_regexp = re.compile("--.*") + +def dequote(s): + if s[0] in ["'" , '"']: + if s[0] == s[-1]: + return s[1:-1] + else: + raise ValueError("Quote fuckup") + else: + return s + + +class FaultCollection(object): + def __init__(self , grid , *file_list): + self.__fault_list = [] + self.__fault_map = {} + self.__grid = grid + + for file in file_list: + self.load(file) + + + def __len__(self): + return len(self.__fault_list) + + + def __getitem__(self , index): + if isinstance(index , str): + return self.__fault_map[index] + elif isinstance(index , int): + return self.__fault_list[index] + else: + raise TypeError("Argument must be fault name or number") + + def __iter__(self): + return iter(self.__fault_list) + + + def getGrid(self): + return self.__grid + + + def getFault(self , name): + return self.__getitem__(name) + + + def hasFault(self , fault_name): + return self.__fault_map.has_key( fault_name ) + + + def addFault(self, fault_name): + new_fault = Fault(self.__grid , fault_name) + self.__fault_map[fault_name] = new_fault + self.__fault_list.append( new_fault ) + + + def splitLine(self , line): + tmp = line.split() + if not tmp[-1] == "/": + raise ValueError("Line:%s does not end with /" % line) + + if len(tmp) != 9: + raise ValueError("Line:%s not correct number of items" % line) + + fault_name = dequote(tmp[0]) + I1 = int(tmp[1]) - 1 + I2 = int(tmp[2]) - 1 + J1 = int(tmp[3]) - 1 + J2 = int(tmp[4]) - 1 + K1 = int(tmp[5]) - 1 + K2 = int(tmp[6]) - 1 + face = dequote(tmp[7]) + + return (fault_name , I1,I2,J1,J2,K1,K2 , face) + + + + def loadFaults(self , fileH): + for line in fileH: + line = comment_regexp.sub("" , line) + line = line.strip() + if line == "/": + break + + if line: + (name , I1 , I2 , J1 , J2 , K1 , K2 , face) = self.splitLine( line ) + if not self.hasFault(name): + self.addFault(name) + fault = self.getFault(name) + fault.addRecord(I1 , I2 , J1 , J2 , K1 , K2 , face) + + + def load(self , file_name): + with open(file_name) as fileH: + for line in fileH: + if line.startswith("FAULTS"): + self.loadFaults(fileH) + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_line.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_line.py new file mode 100644 index 0000000000..5e40715f12 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_line.py @@ -0,0 +1,173 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_line.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + + + +import sys +from ert.geo import Polyline + + + + +def cmpIndexPair(p1,p2): + if p1[0] == p2[0]: + return cmp(p1[1] , p2[1]) + else: + return cmp(p1[0] , p2[0]) + + + +class FaultLine(object): + def __init__(self , grid , k): + self.__grid = grid + self.__k = k + self.__segment_list = [] + self.__polyline = None + self.__neighborCells = None + + def __len__(self): + return len(self.__segment_list) + + + def __getitem__(self , index): + return self.__segment_list[index] + + def __iter__(self): + return iter(self.__segment_list) + + + def verify(self): + if len(self.__segment_list) > 1: + current = self.__segment_list[0] + for next_segment in self.__segment_list[1:]: + if not current.getC2( ) == next_segment.getC1( ): + sys.stdout.write("Current: %d ---- %d \n" % (current.getC1() , current.getC2())) + sys.stdout.write("Next : %d ---- %d \n" % (next_segment.getC1() , next_segment.getC2())) + assert current.getC2( ) == next_segment.getC1( ) + current = next_segment + + + def tryAppend(self , segment): + if len(self.__segment_list) > 0: + tail = self.__segment_list[-1] + if tail.getC2() != segment.getC1(): + if len(self.__segment_list) == 1: + if tail.getC2() == segment.getC2(): + segment.swap() + else: + tail.swap() + if tail.getC2() == segment.getC2(): + segment.swap() + else: + segment.swap() + + if not tail.getC2( ) == segment.getC1( ): + return False + + self.__segment_list.append( segment ) + self.__polyline = None + return True + + + def getK(self): + return self.__k + + + def __initPolyline(self): + pl = Polyline() + for segment in self: + (x,y,z) = self.__grid.getLayerXYZ( segment.getC1( ) , self.__k ) + pl.addPoint( x,y,z ) + + segment = self[-1] + (x,y,z) = self.__grid.getLayerXYZ( segment.getC2( ) , self.__k ) + pl.addPoint( x,y,z ) + self.__polyline = pl + + + def getPolyline(self): + if self.__polyline is None: + self.__initPolyline() + return self.__polyline + + + def __initNeighborCells(self): + self.__neighborCells = [] + nx = self.__grid.getNX() + ny = self.__grid.getNY() + k = self.__k + + for segment in self: + (j1,i1) = divmod(segment.getC1() , (nx + 1 )) + (j2,i2) = divmod(segment.getC2() , (nx + 1 )) + + if j1 > j2: + j1,j2 = j2,j1 + + if i1 > i2: + i1,i2 = i2,i1 + + + if i1 == i2: + i = i1 + for j in range(j1 , j2): + g2 = i + j * nx + k * nx*ny + if i == 0: + g1 = -1 + else: + g1 = g2 - 1 + + if i == nx: + g2 = -1 + + self.__neighborCells.append( (g1,g2) ) + elif j1 == j2: + j = j1 + for i in range(i1,i2): + g2 = i + j * nx + k * nx*ny + if j == 0: + g1 = -1 + else: + g1 = g2 - nx + + if j == ny: + g2 = -1 + + self.__neighborCells.append( (g1,g2) ) + else: + raise Exception("Internal error: found fault segment with variation in two directions") + self.__neighborCells.sort( cmpIndexPair ) + + + def getNeighborCells(self): + if self.__neighborCells is None: + self.__initNeighborCells() + + return self.__neighborCells + + + + def dump(self): + print "-----------------------------------------------------------------" + for segment in self: + C1 = segment.getC1() + C2 = segment.getC2() + (J1 , I1) = divmod(C1 , self.__grid.getNX() + 1) + (J2 , I2) = divmod(C2 , self.__grid.getNX() + 1) + print "[Corner:%5d IJ:(%3d,%d)] -> [Corner:%5d IJ:(%3d,%d)]" % (C1 , I1, J1 ,C2 , I2 , J2) + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_segments.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_segments.py new file mode 100644 index 0000000000..bdea5ddbd0 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/fault_segments.py @@ -0,0 +1,150 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'fault_line.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +class FaultSegment(object): + def __init__(self , C1 , C2 ): + self.__C1 = C1 + self.__C2 = C2 + self.__next_segment = None + + + def __eq__(self , other): + if self.__C1 == other.__C1 and self.__C2 == other.__C2: + return True + elif self.__C1 == other.__C2 and self.__C2 == other.__C1: + return True + else: + return False + + def getCorners(self): + return (self.__C1 , self.__C2) + + def joins(self , other): + if self.__C1 == other.__C1: + return True + if self.__C1 == other.__C2: + return True + if self.__C2 == other.__C1: + return True + if self.__C2 == other.__C2: + return True + + return False + + def getC1(self): + return self.__C1 + + def getC2(self): + return self.__C2 + + def swap(self): + C1 = self.__C1 + self.__C1 = self.__C2 + self.__C2 = C1 + + + def __str__(self): + return "%d -> %d" % (self.__C1 , self.__C2) + + + +class SegmentMap(object): + def __init__(self): + self.__segment_map = {} + self.__count_map = {} + + def __len__(self): + return len(self.__segment_map) + + + def __str__(self): + return self.__segment_map.__str__() + + def verify(self): + for (C, count) in self.__count_map.iteritems(): + if count > 0: + d = self.__segment_map[C] + if len(d) != count: + print "CornerPoint:%d count:%d len(d):%d map:%s" % (C , count , len(d) , d) + assert len(d) == count + else: + assert self.__segment_map.get(C) is None + + + + + def addSegment(self , segment): + (C1,C2) = segment.getCorners() + if not self.__segment_map.has_key(C1): + self.__segment_map[C1] = {} + self.__count_map[C1] = 0 + if not self.__segment_map.has_key(C2): + self.__segment_map[C2] = {} + self.__count_map[C2] = 0 + + if not self.__segment_map[C1].has_key(C2): + self.__segment_map[C1][C2] = segment + self.__count_map[C1] += 1 + + if not self.__segment_map[C2].has_key(C1): + self.__segment_map[C2][C1] = segment + self.__count_map[C2] += 1 + + + + def delSegment(self , segment): + (C1,C2) = segment.getCorners() + self.__count_map[C1] -= 1 + self.__count_map[C2] -= 1 + del self.__segment_map[C1][C2] + del self.__segment_map[C2][C1] + + if len(self.__segment_map[C1]) == 0: + del self.__segment_map[C1] + + if len(self.__segment_map[C2]) == 0: + del self.__segment_map[C2] + + + def popStart(self): + end_segments = [] + for (C, count) in self.__count_map.iteritems(): + if count == 1: + end_segments.append(self.__segment_map[C].values()[0]) + + start_segment = end_segments[0] + self.delSegment( start_segment ) + return start_segment + + + def popNext(self , segment): + (C1,C2) = segment.getCorners() + if self.__count_map[C1] >= 1: + next_segment = self.__segment_map[C1].values()[0] + elif self.__count_map[C2] >= 1: + next_segment = self.__segment_map[C2].values()[0] + else: + next_segment = None + + if next_segment: + self.delSegment( next_segment ) + return next_segment + + + def printContent(self): + for d in self.__segment_map.values(): + for (C,S) in d.iteritems(): + print S diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/layer.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/layer.py new file mode 100644 index 0000000000..f0072160e4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/layer.py @@ -0,0 +1,77 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'layer.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import ctypes +from ert.cwrap import BaseCClass, CWrapper +from ert.ecl import ECL_LIB + +class Layer(BaseCClass): + + def __init__(self , nx , ny): + c_pointer = self.cNamespace().alloc( nx , ny ) + if c_pointer: + super( Layer , self).__init__(c_pointer) + else: + raise ValueError("Invalid input - no Layer object created") + + + def __unpackIndex(self , index): + try: + (i,j) = index + except TypeError: + raise ValueError("Index:%s is invalid - must have two integers" % str(index)) + + if i < 0 or i >= self.getNX(): + raise ValueError("Invalid layer i:%d" % i) + + if j < 0 or j >= self.getNY(): + raise ValueError("Invalid layer j:%d" % j) + + return (i,j) + + + + def __setitem__(self , index , value): + (i,j) = self.__unpackIndex(index) + self.cNamespace().set_cell(self , i , j , value ) + + + def __getitem__(self , index): + (i,j) = self.__unpackIndex(index) + return self.cNamespace().get_cell(self , i , j) + + + def getNX(self): + return self.cNamespace().get_nx(self) + + def getNY(self): + return self.cNamespace().get_ny(self) + + def free(self): + self.cNamespace().free(self) + + + + + +cwrapper = CWrapper(ECL_LIB) +CWrapper.registerObjectType("layer", Layer) +Layer.cNamespace().alloc = cwrapper.prototype("c_void_p layer_alloc(int, int)") +Layer.cNamespace().free = cwrapper.prototype("void layer_free(layer)") +Layer.cNamespace().get_nx = cwrapper.prototype("int layer_get_nx(layer)") +Layer.cNamespace().get_ny = cwrapper.prototype("int layer_get_ny(layer)") +Layer.cNamespace().set_cell = cwrapper.prototype("void layer_iset_cell_value(layer , int , int , int)") +Layer.cNamespace().get_cell = cwrapper.prototype("int layer_iget_cell_value(layer , int , int )") diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/faults/region_definition.py b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/region_definition.py new file mode 100644 index 0000000000..8f2a115e43 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/faults/region_definition.py @@ -0,0 +1,171 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'region_definition.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import collections +import os.path + +from ert.geo import Polyline , XYZIo, GeometryTools +from ert.ecl.faults import Fault, FaultBlockLayer , Layer +from ert.ecl import EclKW, EclTypeEnum + +class RegionDefinition(object): + + def __init__(self , region_id): + if not isinstance(region_id , int): + raise TypeError("The region_id input argument must be integer. region_id:%s - invalid" % region_id) + + self.region_id = region_id + self.edges = [] + self.__has_polygon = False + + + + @staticmethod + def create(region_id , faults , edge_names): + regionDef = RegionDefinition( region_id ) + + for edge_name in edge_names: + if isinstance(edge_name , str): + if faults.hasFault( edge_name ): + regionDef.addEdge( faults[ edge_name ] ) + elif os.path.exists( edge_name ): + regionDef.addEdge( XYZIo.readXYZFile( edge_name ) ) + else: + raise ValueError("The elements in edge_list must be strings with either name of faults or filename with polygon. %s: invalid" % edge_name) + else: + raise ValueError("The elements in edge_list must be strings with either name of faults or filename with polygon. %s: invalid" % edge_name) + + return regionDef + + + def getRegionID(self): + return self.region_id + + + def addEdge(self , edge): + if isinstance(edge , Polyline): + self.edges.append( edge ) + self.__has_polygon = True + elif isinstance(edge , Fault): + self.edges.append( edge ) + else: + raise TypeError("Tried to add edge of wrong type; must be Fault or Polyline") + + + + def __convexHull(self , k): + point_list = [] + + if len(self.edges) == 0: + raise Exception("You must add Fault / Polyline edges first") + + for edge in self.edges: + if isinstance(edge , Fault): + fault = edge + layer = fault[k] + for line in layer: + for p in line.getPolyline(): + point_list.append( (p[0] , p[1]) ) + else: + poly_line = edge + for p in poly_line: + point_list.append( (p[0] , p[1]) ) + + return GeometryTools.convexHull( point_list ) + + + def findInternalBlocks(self , grid , fault_block_layer): + block_list = [] + raise NotImplementedError + return block_list + + + def hasPolygon(self): + return self.__has_polygon + + + @staticmethod + def splitFaultBlockClosedPolygon( grid , fault_blocks , polygon ): + """ + Special case code when the region is limited only by one polygon. + """ + new_fault_blocks = FaultBlockLayer( grid , fault_blocks.getK() ) + new_block = new_fault_blocks.addBlock() + + for block in fault_blocks: + for p in block: + if GeometryTools.pointInPolygon( (p.x , p.y) , polygon ): + new_block.addCell(p.i , p.j) + + return new_fault_blocks + + + + + def splitFaultBlocks(self , grid , fault_blocks ): + boundingPolygon = Polyline(init_points = grid.getBoundingBox2D()) + boundingPolygon.assertClosed() + if self.hasPolygon(): + if len(self.edges) == 1: + return self.splitFaultBlockClosedPolygon( grid , fault_blocks , self.edges[0] ) + else: + current_fault_block_layer = fault_blocks + k = fault_blocks.getK() + for edge in self.edges: + if isinstance(edge , Polyline): + # Start on a brand new fault block layer. + next_fault_block_layer = FaultBlockLayer( grid , k ) + for block in current_fault_block_layer: + if block.containsPolyline(edge): + print "Block %d is split due to edge:%s" % (block.getBlockID() , edge.name()) + sliced = GeometryTools.slicePolygon( boundingPolygon , edge ) + inside_list = [] + outside_list = [] + for p in block: + if GeometryTools.pointInPolygon( (p.x , p.y) , sliced ): + inside_list.append( p ) + else: + outside_list.append( p ) + + if len(inside_list) * len(outside_list) == 0: + new_block = next_fault_block_layer.addBlock( ) + for p in inside_list: + new_block.addCell(p.i , p.j) + + for p in outside_list: + new_block.addCell(p.i , p.j) + else: + layer = Layer( grid.getNX() , grid.getNY() ) + for p in inside_list: + layer[p.i , p.j] = 1 + + for p in outside_list: + layer[p.i , p.j] = 2 + + next_fault_block_layer.scanLayer( layer ) + else: + next_fault_block_layer.insertBlockContent( block ) + + current_fault_block_layer = next_fault_block_layer + return current_fault_block_layer + else: + return fault_blocks + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py b/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py index 03f5dafdac..b7bd988b38 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py @@ -36,122 +36,93 @@ support passing of FortIO handles to the underlying C functions. A more extensive wrapping of the fortio implementation would be easy. """ -from ert.cwrap import CClass, CWrapper, CWrapperNameSpace, CFILE +import ctypes +import os +import sys +from ert.cwrap import BaseCClass, CWrapper from ert.ecl import ECL_LIB -class FortIO(CClass): - """ - Class to support binary IO of files created by the Fortran runtime. - - The FortIO class is a thin wrapper around the C struct fortio. The - FortIO class is created to facilitate reading and writing binary - fortran files. The python implementation (currently) only supports - instantiation and subsequent use in a C function, but it would be - simple to wrap the low level read/write functions for Python - access as well. - """ - - #def __init__(self , filename , mode , fmt_file = False , endian_flip = True): - # """ - # Create a FortIO handle connected to file @filename. @mode as in fopen() - # - # Will create a FortIO handle connected to the file - # @filename. The @mode flag is passed directly to the final - # fopen() call and should be "r" to open the file for reading - # and "w" for writing. - # - # The point of the FortIO class is to work with binary files, - # but you can set the @fmt_file parameter to True if you want to - # read/write formatted ECLIPSE files in restart format. - # - # By default the FortIO instances will be opened with - # endian_flip set to True (this is the correct behaviour for the - # ECLIPSE/x86 combination) - but other values are in principle - # possible. Observe that the endian flipping only applies to the - # header/footer inserted by the Fortran runtime, the actual data - # is not touched by the FortIO instance. - # """ - - - # The fundamental open functions use a normal Python open() call - # and pass the filehandle to the C layer, instead of letting the C - # layer open the file. This way normal Python exception handling - # will be invoked if there are problems with opening the file. - - @classmethod - def __wrap(cls , filename, pyfile , fmt_file , endian_flip ): - obj = cls( ) - - obj.pyfile = pyfile - c_ptr = cfunc.fortio_wrap_FILE( filename , endian_flip , fmt_file , CFILE(obj.pyfile)) - obj.init_cobj( c_ptr , None ) - return obj - - - @classmethod - def open(cls , filename, mode = "r" , fmt_file = False , endian_flip = True): - """ - Will open of FortIO instance. - """ - pyfile = open( filename , mode) - return cls.__wrap( filename , pyfile , fmt_file , endian_flip ) - - - @classmethod - def reader(cls , filename , fmt_file = False , endian_flip = True): - """ - Will open a FortIO handle for reading. - """ - return cls.open( filename , "r" , fmt_file , endian_flip ) - +class FortIO(BaseCClass): + READ_MODE = 1 + WRITE_MODE = 2 + READ_AND_WRITE_MODE = 3 + APPEND_MODE = 4 - @classmethod - def writer(cls , filename , fmt_file = False , endian_flip = True): - """ - Will open a FortIO handle for writing. - """ - return cls.open( filename , "w" , fmt_file , endian_flip ) + def __init__(self, file_name, mode=READ_MODE, fmt_file=False, endian_flip_header=True): + if mode == FortIO.READ_MODE or mode == FortIO.APPEND_MODE or mode == FortIO.READ_AND_WRITE_MODE: + if not os.path.exists(file_name): + raise IOError("File '%s' does not exist!" % file_name) - # Implements normal Python semantics - close on delete. - # Because the __del__() operator, i.e. the close(), involves - # more than just a cfree() function we must override the - # __del__ operator of the base class. - def __del__(self): - """ - Desctructor - will close the filehandle. - """ - if self.c_ptr: - self.close( ) + if mode == FortIO.READ_MODE: + c_pointer = FortIO.cNamespace().open_reader(file_name, fmt_file, endian_flip_header) + elif mode == FortIO.WRITE_MODE: + c_pointer = FortIO.cNamespace().open_writer(file_name, fmt_file, endian_flip_header) + elif mode == FortIO.READ_AND_WRITE_MODE: + c_pointer = FortIO.cNamespace().open_readwrite(file_name, fmt_file, endian_flip_header) + elif mode == FortIO.APPEND_MODE: + c_pointer = FortIO.cNamespace().open_append(file_name, fmt_file, endian_flip_header) + else: + raise UserWarning("Unknown mode: %d" % mode) + + self.__mode = mode + + super(FortIO, self).__init__(c_pointer) + self.__open = True + def close(self): + if self.__open: + FortIO.cNamespace().close(self) + self.__open = False - def close( self ): + def writeRecord(self, data): """ - Close the filehandle. + Not a good way of implementing this. ;-) + @type data: bytearray """ + buffer = (ctypes.c_char * len(data)).from_buffer(data) + FortIO.cNamespace().write_record(self, buffer, len(data)) - # Seems Python itself allows close() calls on already closed file handles, - # so we take care to ensure that also the FortIO class supports that. - if self.pyfile: - self.pyfile.close() - cfunc.free_wrapper( self ) - self.pyfile = None - self.c_ptr = None + def readRecordAsString(self, record_size): + """ @rtype: str """ + chars = ctypes.create_string_buffer(record_size) + count = FortIO.cNamespace().read_record(self, chars) + return ctypes.string_at(chars, count) + + + def getPosition(self): + """ @rtype: long """ + return FortIO.cNamespace().get_position(self) + + def seek(self, position): + # SEEK_SET = 0 + # SEEK_CUR = 1 + # SEEK_END = 2 + FortIO.cNamespace().seek(self, position, 0) + + + def free(self): + self.close() -# 2. Creating a wrapper object around the libecl library, -# registering the type map : fortio <-> FortIO cwrapper = CWrapper(ECL_LIB) -cwrapper.registerType("fortio" , FortIO ) +cwrapper.registerObjectType("fortio", FortIO) + +FortIO.cNamespace().open_reader = cwrapper.prototype("c_void_p fortio_open_reader(char*, bool, bool)") +FortIO.cNamespace().open_writer = cwrapper.prototype("c_void_p fortio_open_writer(char*, bool, bool)") +FortIO.cNamespace().open_readwrite = cwrapper.prototype("c_void_p fortio_open_readwrite(char*, bool, bool)") +FortIO.cNamespace().open_append = cwrapper.prototype("c_void_p fortio_open_append(char*, bool, bool)") + +FortIO.cNamespace().write_record = cwrapper.prototype("void fortio_fwrite_record(fortio, char*, int)") +FortIO.cNamespace().read_record = cwrapper.prototype("int fortio_fread_record(fortio, char*)") + +FortIO.cNamespace().get_position = cwrapper.prototype("long fortio_ftell(fortio)") +FortIO.cNamespace().seek = cwrapper.prototype("void fortio_fseek(fortio, int)") + +FortIO.cNamespace().close = cwrapper.prototype("bool fortio_fclose(fortio)") -# 3. Installing the c-functions used to manipulate fortio instances. -# These functions are used when implementing the FortIO class, not -# used outside this scope. -cfunc = CWrapperNameSpace("fortio") -cfunc.fortio_wrap_FILE = cwrapper.prototype("c_void_p fortio_alloc_FILE_wrapper( char* , bool , bool , FILE )") -cfunc.free_wrapper = cwrapper.prototype("void fortio_free_FILE_wrapper( fortio )") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt index cb51db354b..d8c21ba399 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt @@ -2,21 +2,29 @@ set(PYTHON_SOURCES __init__.py analysis_config.py analysis_iter_config.py - block_obs.py ecl_config.py enkf_fs.py enkf_fs_manager.py + enkf_linalg.py enkf_main.py enkf_obs.py enkf_simulation_runner.py enkf_state.py ens_config.py + ert_log.py ert_template.py ert_templates.py ert_workflow_list.py + gen_data.py local_config.py + local_obsdata.py + local_obsdata_node.py + meas_data.py model_config.py + node_id.py + obs_data.py plot_config.py + post_simulation_hook.py site_config.py state_map.py ) @@ -24,8 +32,8 @@ set(PYTHON_SOURCES add_python_package("python.ert.enkf" ${PYTHON_INSTALL_PREFIX}/ert/enkf "${PYTHON_SOURCES}" True) add_subdirectory(data) -add_subdirectory(ensemble_data) add_subdirectory(enums) add_subdirectory(observations) add_subdirectory(plot) +add_subdirectory(plot_data) add_subdirectory(util) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py index c28d992798..5577ad7874 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py @@ -17,23 +17,33 @@ import ert.cwrap.clib as clib -import ert.analysis -ENKF_LIB = clib.ert_load("libenkf.so") +ENKF_LIB = clib.ert_load("libenkf") -from .enums import EnkfStateType, EnkfVarType, EnkfRunEnum, LoadFailTypeEnum, EnkfObservationImplementationType +from .enums import * +from .node_id import NodeId + +from .gen_data import GenData +from .enkf_linalg import EnkfLinalg from .util import TimeMap +from .state_map import StateMap from .enkf_fs import EnkfFs from .ert_workflow_list import ErtWorkflowList from .observations import SummaryObservation, ObsVector +from .local_obsdata_node import LocalObsdataNode +from .local_obsdata import LocalObsdata +from .obs_data import ObsData +from .meas_data import MeasData + from .analysis_iter_config import AnalysisIterConfig from .analysis_config import AnalysisConfig -from .block_obs import BlockObs from .ecl_config import EclConfig +from .data import * + from .enkf_obs import EnkfObs from .enkf_state import EnKFState from .ens_config import EnsConfig @@ -43,11 +53,13 @@ from .model_config import ModelConfig from .plot_config import PlotConfig from .site_config import SiteConfig -from .state_map import StateMap +from .post_simulation_hook import PostSimulationHook + from .enkf_simulation_runner import EnkfSimulationRunner from .enkf_fs_manager import EnkfFsManager from .enkf_main import EnKFMain +from .ert_log import ErtLog -from .data import EnkfConfigNode, EnkfNode, GenDataConfig, GenKwConfig, FieldConfig, Field +from ert.job_queue import ErtScript as ErtScript \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_config.py index 6a3b67c066..0d4afcefec 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_config.py @@ -16,6 +16,7 @@ from ert.cwrap import BaseCClass, CWrapper from ert.enkf import ENKF_LIB from ert.enkf import AnalysisIterConfig +from ert.analysis import AnalysisModule class AnalysisConfig(BaseCClass): @@ -58,7 +59,7 @@ def getAnalysisIterConfig(self): """ @rtype: AnalysisIterConfig """ return AnalysisConfig.cNamespace().get_iter_config(self).setParent(self) - def get_min_realisations(self): + def getMinRealisations(self): """ @rtype: int """ return AnalysisConfig.cNamespace().get_min_realisations( self ) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_iter_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_iter_config.py index f24ebb0d68..21473884e6 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_iter_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/analysis_iter_config.py @@ -19,7 +19,8 @@ class AnalysisIterConfig(BaseCClass): def __init__(self): - raise NotImplementedError("Class can not be instantiated directly!") + c_ptr = AnalysisIterConfig.cNamespace().alloc() + super(AnalysisIterConfig , self).__init__(c_ptr) def getNumIterations(self): """ @rtype: int """ @@ -28,6 +29,13 @@ def getNumIterations(self): def setNumIterations(self, num_iterations): AnalysisIterConfig.cNamespace().set_num_iterations(self, num_iterations) + def numIterationsSet(self): + return AnalysisIterConfig.cNamespace().num_iterations_set(self) + + def getNumRetries(self): + """ @rtype: int """ + return AnalysisIterConfig.cNamespace().get_num_retries(self) + def getCaseFormat(self): """ @rtype: str """ return AnalysisIterConfig.cNamespace().get_case_fmt(self) @@ -35,25 +43,22 @@ def getCaseFormat(self): def setCaseFormat(self, case_fmt): AnalysisIterConfig.cNamespace().set_case_fmt(self, case_fmt) - def getRunpathFormat(self): - """ @rtype: str """ - return AnalysisIterConfig.cNamespace().get_runpath_fmt(self) - - def setRunpathFormat(self, runpath_fmt): - AnalysisIterConfig.cNamespace().set_runpath_fmt(self, runpath_fmt) + def caseFormatSet(self): + return AnalysisIterConfig.cNamespace().case_fmt_set(self) - ################################################################## + def free(self): + AnalysisIterConfig.cNamespace().free(self) cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("analysis_iter_config", AnalysisIterConfig) -cwrapper.registerType("analysis_iter_config_obj", AnalysisIterConfig.createPythonObject) -cwrapper.registerType("analysis_iter_config_ref", AnalysisIterConfig.createCReference) +cwrapper.registerObjectType("analysis_iter_config", AnalysisIterConfig) +AnalysisIterConfig.cNamespace().alloc = cwrapper.prototype("c_void_p analysis_iter_config_alloc( )") AnalysisIterConfig.cNamespace().free = cwrapper.prototype("void analysis_iter_config_free( analysis_iter_config )") AnalysisIterConfig.cNamespace().set_num_iterations = cwrapper.prototype("void analysis_iter_config_set_num_iterations(analysis_iter_config, int)") AnalysisIterConfig.cNamespace().get_num_iterations = cwrapper.prototype("int analysis_iter_config_get_num_iterations(analysis_iter_config)") +AnalysisIterConfig.cNamespace().get_num_retries = cwrapper.prototype("int analysis_iter_config_get_num_retries_per_iteration(analysis_iter_config)") +AnalysisIterConfig.cNamespace().num_iterations_set = cwrapper.prototype("bool analysis_iter_config_num_iterations_set(analysis_iter_config)") AnalysisIterConfig.cNamespace().set_case_fmt = cwrapper.prototype("void analysis_iter_config_set_case_fmt( analysis_iter_config , char* )") AnalysisIterConfig.cNamespace().get_case_fmt = cwrapper.prototype("char* analysis_iter_config_get_case_fmt( analysis_iter_config)") -AnalysisIterConfig.cNamespace().set_runpath_fmt = cwrapper.prototype("void analysis_iter_config_set_runpath_fmt( analysis_iter_config , char*)"); -AnalysisIterConfig.cNamespace().get_runpath_fmt = cwrapper.prototype("char* analysis_iter_config_get_runpath_fmt( analysis_iter_config)") +AnalysisIterConfig.cNamespace().case_fmt_set = cwrapper.prototype("bool analysis_iter_config_case_fmt_set(analysis_iter_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/block_obs.py b/ThirdParty/Ert/devel/python/python/ert/enkf/block_obs.py deleted file mode 100644 index f7eccd3067..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/block_obs.py +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright (C) 2012 Statoil ASA, Norway. -# -# The file 'block_obs.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. -from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import ENKF_LIB - - -class BlockObs(BaseCClass): - def __init__(self): - raise NotImplementedError("Class can not be instantiated directly!") - - def iget_i(self, index): - return BlockObs.cNamespace().iget_i(self, index) - - def iget_j(self, index): - return BlockObs.cNamespace().iget_j(self, index) - - def iget_k(self, index): - return BlockObs.cNamespace().iget_k(self, index) - - def get_size(self): - return BlockObs.cNamespace().get_size(self) - - def iget(self, index, value, std): - return BlockObs.cNamespace().iget(self, index, value, std) - - def free(self): - BlockObs.cNamespace().free(self) - -################################################################## - -cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("block_obs", BlockObs) -cwrapper.registerType("block_obs_obj", BlockObs.createPythonObject) -cwrapper.registerType("block_obs_ref", BlockObs.createCReference) - -BlockObs.cNamespace().free = cwrapper.prototype("void block_obs_free( block_obs )") -BlockObs.cNamespace().iget_i = cwrapper.prototype("int block_obs_iget_i(block_obs, int)") -BlockObs.cNamespace().iget_j = cwrapper.prototype("int block_obs_iget_j( block_obs, int)") -BlockObs.cNamespace().iget_k = cwrapper.prototype("int block_obs_iget_k( block_obs , int)") -BlockObs.cNamespace().get_size = cwrapper.prototype("int block_obs_get_size( block_obs )") -BlockObs.cNamespace().iget = cwrapper.prototype("void block_obs_iget( block_obs, int, double*, double*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt index c621f13145..2be976e287 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt @@ -2,6 +2,7 @@ set(PYTHON_SOURCES __init__.py enkf_config_node.py enkf_node.py + gen_kw.py field.py field_config.py gen_data_config.py diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py index 045e7a3c29..32882e45c9 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py @@ -2,7 +2,17 @@ from .gen_kw_config import GenKwConfig from .field_config import FieldConfig from .summary_config import SummaryConfig +from .field import Field -from .enkf_node import EnkfNode from .enkf_config_node import EnkfConfigNode -from .field import Field \ No newline at end of file +from .enkf_node import EnkfNode +from .gen_kw import GenKw + +__all__ = ["GenDataConfig", + "GenKwConfig", + "FieldConfig", + "SummaryConfig", + "Field", + "EnkfConfigNode", + "EnkfNode", + "GenKw"] diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_config_node.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_config_node.py index 62f841c51c..acb4d22aa2 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_config_node.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_config_node.py @@ -15,8 +15,10 @@ # for more details. from ert.cwrap import BaseCClass, CWrapper from ert.enkf import ENKF_LIB -from ert.enkf.data import FieldConfig, GenDataConfig, GenKwConfig, EnkfNode, SummaryConfig -from ert.enkf.enums.load_fail_type_enum import LoadFailTypeEnum +from ert.enkf.data import FieldConfig, GenDataConfig, GenKwConfig, SummaryConfig +from ert.enkf.enums import EnkfTruncationType, ErtImplType, LoadFailTypeEnum, EnkfVarType +from ert.ecl import EclGrid + class EnkfConfigNode(BaseCClass): @@ -29,42 +31,50 @@ def __init__(self): raise NotImplementedError("Class can not be instantiated directly!") def getImplementationType( self ): + """ @rtype: ErtImplType """ return EnkfConfigNode.cNamespace().get_impl_type(self) - def get_var_type( self ): - return EnkfConfigNode.cNamespace().get_var_type(self) + def getVariableType( self ): + return EnkfConfigNode.cNamespace().get_var_type(self) def getPointerReference(self): return EnkfConfigNode.cNamespace().get_ref(self) - def get_min_std_file(self): - return EnkfConfigNode.cNamespace().get_min_std_file(self) + # def get_min_std_file(self): + # return EnkfConfigNode.cNamespace().get_min_std_file(self) - def get_enkf_outfile(self): - return EnkfConfigNode.cNamespace().get_enkf_outfile(self) + # def get_enkf_outfile(self): + # return EnkfConfigNode.cNamespace().get_enkf_outfile(self) def getFieldModelConfig(self): + """ @rtype: FieldConfig """ return FieldConfig.createCReference(EnkfConfigNode.cNamespace().get_ref(self), parent=self) def getDataModelConfig(self): + """ @rtype: GenDataConfig """ return GenDataConfig.createCReference(EnkfConfigNode.cNamespace().get_ref(self), parent=self) def getKeywordModelConfig(self): + """ @rtype: GenKWConfig """ return GenKwConfig.createCReference(EnkfConfigNode.cNamespace().get_ref(self), parent=self) - def get_enkf_infile(self): - return EnkfConfigNode.cNamespace().get_enkf_infile(self) + # def get_enkf_infile(self): + # return EnkfConfigNode.cNamespace().get_enkf_infile(self) - def alloc_node(self): - return EnkfNode(self) + # def alloc_node(self): + # return EnkfNode(self) - def get_init_file_fmt(self): - return EnkfConfigNode.cNamespace().get_init_file_fmt(self) + # def get_init_file_fmt(self): + # return EnkfConfigNode.cNamespace().get_init_file_fmt(self) def getObservationKeys(self): """ @rtype: StringList """ return EnkfConfigNode.cNamespace().get_obs_keys(self).setParent(self) + def updateStateField(self, truncation, value_min, value_max): + assert isinstance(truncation, EnkfTruncationType) + EnkfConfigNode.cNamespace().update_state_field(self, truncation, value_min, value_max) + @classmethod def createSummaryConfigNode(cls, key, load_fail_type): """ @@ -76,6 +86,14 @@ def createSummaryConfigNode(cls, key, load_fail_type): assert isinstance(load_fail_type, LoadFailTypeEnum) return EnkfConfigNode.cNamespace().alloc_summary_node(key, load_fail_type) + @classmethod + def createFieldConfigNode(cls, key, grid, trans_table = None, forward_init = False): + """ + @type grid: EclGrid + @rtype: EnkfConfigNode + """ + return EnkfConfigNode.cNamespace().alloc_field_node(key, grid, trans_table, forward_init) + def free(self): EnkfConfigNode.cNamespace().free(self) @@ -97,17 +115,18 @@ def getModelConfig(self): cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("enkf_config_node", EnkfConfigNode) -cwrapper.registerType("enkf_config_node_obj", EnkfConfigNode.createPythonObject) -cwrapper.registerType("enkf_config_node_ref", EnkfConfigNode.createCReference) +cwrapper.registerObjectType("enkf_config_node", EnkfConfigNode) -EnkfConfigNode.cNamespace().free = cwrapper.prototype("void enkf_config_node_free( enkf_config_node )") +EnkfConfigNode.cNamespace().free = cwrapper.prototype("void enkf_config_node_free(enkf_config_node)") EnkfConfigNode.cNamespace().get_ref = cwrapper.prototype("c_void_p enkf_config_node_get_ref(enkf_config_node)") #todo: fix return type -EnkfConfigNode.cNamespace().get_impl_type = cwrapper.prototype("int enkf_config_node_get_impl_type(enkf_config_node)") #todo: fix return type as enum +EnkfConfigNode.cNamespace().get_impl_type = cwrapper.prototype("ert_impl_type_enum enkf_config_node_get_impl_type(enkf_config_node)") + EnkfConfigNode.cNamespace().get_enkf_outfile = cwrapper.prototype("char* enkf_config_node_get_enkf_outfile(enkf_config_node)") EnkfConfigNode.cNamespace().get_min_std_file = cwrapper.prototype("char* enkf_config_node_get_min_std_file(enkf_config_node)") EnkfConfigNode.cNamespace().get_enkf_infile = cwrapper.prototype("char* enkf_config_node_get_enkf_infile(enkf_config_node)") EnkfConfigNode.cNamespace().get_init_file_fmt = cwrapper.prototype("char* enkf_config_node_get_init_file_fmt(enkf_config_node)") -EnkfConfigNode.cNamespace().get_var_type = cwrapper.prototype("c_void_p enkf_config_node_get_var_type(enkf_config_node)") #todo: fix return type as enum +EnkfConfigNode.cNamespace().get_var_type = cwrapper.prototype("enkf_var_type_enum enkf_config_node_get_var_type(enkf_config_node)") #todo: fix return type as enum EnkfConfigNode.cNamespace().get_obs_keys = cwrapper.prototype("stringlist_ref enkf_config_node_get_obs_keys(enkf_config_node)") EnkfConfigNode.cNamespace().alloc_summary_node = cwrapper.prototype("enkf_config_node_obj enkf_config_node_alloc_summary(char*, load_fail_type)") +EnkfConfigNode.cNamespace().alloc_field_node = cwrapper.prototype("enkf_config_node_obj enkf_config_node_alloc_field(char*, ecl_grid, c_void_p, bool)") +EnkfConfigNode.cNamespace().update_state_field = cwrapper.prototype("void enkf_config_node_update_state_field(enkf_config_node, enkf_truncation_type_enum, double, double)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py index 60a18e7b0d..267d1aee89 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py @@ -14,53 +14,81 @@ # See the GNU General Public License at # for more details. from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import ENKF_LIB -import ert +from ert.enkf import ENKF_LIB, EnkfFs, NodeId, GenData +from ert.enkf.data import EnkfConfigNode +from ert.enkf.data.gen_data_config import GenDataConfig +from ert.enkf.enums import EnkfStateType +from ert.enkf.enums.ert_impl_type_enum import ErtImplType class EnkfNode(BaseCClass): - def __init__(self, config_node): - assert isinstance(config_node, ert.enkf.data.EnkfConfigNode) + def __init__(self, config_node, private=False): + assert isinstance(config_node, EnkfConfigNode) + + if private: + c_pointer = EnkfNode.cNamespace().alloc_private(config_node) + else: + c_pointer = EnkfNode.cNamespace().alloc(config_node) - c_pointer = EnkfNode.cNamespace().alloc(config_node) super(EnkfNode, self).__init__(c_pointer, config_node, True) - def user_get(self, fs, key, report_step, iens, state, value): - return EnkfNode.cNamespace().user_get(self, fs, key, report_step, iens, state, value) + # def user_get(self, fs, key, report_step, iens, state, value): + # return EnkfNode.cNamespace().user_get(self, fs, key, report_step, iens, state, value) + # + # def user_get_vector( self, fs, key, iens, state, vector): + # return EnkfNode.cNamespace().user_get_vector(self, fs, key, iens, state, vector) - def user_get_vector( self, fs, key, iens, state, vector): - return EnkfNode.cNamespace().user_get_vector(self, fs, key, iens, state, vector) - def value_ptr(self): + def valuePointer(self): return EnkfNode.cNamespace().value_ptr(self) - def vector_storage(self): - return EnkfNode.cNamespace().vector_storage(self) + def asGenData(self): + """ @rtype: GenData """ + impl_type = EnkfNode.cNamespace().get_impl_type(self) + assert impl_type == ErtImplType.GEN_DATA + + return GenData.createCReference(self.valuePointer(), self) + + + # def vector_storage(self): + # return EnkfNode.cNamespace().vector_storage(self) + + # def getConfig(self): + # """ @rtype: EnkfConfigNode """ + # #todo: fix this!!!! wrong return type in prototype! + # return EnkfNode.cNamespace().get_config(self).setParent(self) + + + def tryLoad(self, fs, node_id): + """ + @type fs: EnkfFS + @type node_id: NodeId + @rtype: bool + """ + assert isinstance(fs, EnkfFs) + assert isinstance(node_id, NodeId) + + return EnkfNode.cNamespace().try_load(self, fs, node_id) - def getConfig(self): - """ @rtype: EnkfConfigNode """ - #todo: fix this!!!! wrong return type in prototype! - return EnkfNode.cNamespace().get_config(self).setParent(self) def free(self): EnkfNode.cNamespace().free(self) -cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("enkf_node", EnkfNode) -cwrapper.registerType("enkf_node_obj", EnkfNode.createPythonObject) -cwrapper.registerType("enkf_node_ref", EnkfNode.createCReference) - -# 3. Installing the c-functions used to manipulate ecl_kw instances. -# These functions are used when implementing the EclKW class, not -# used outside this scope. +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("enkf_node", EnkfNode) EnkfNode.cNamespace().free = cwrapper.prototype("void enkf_node_free( enkf_node )") -EnkfNode.cNamespace().alloc = cwrapper.prototype("c_void_p enkf_node_alloc( enkf_node)") -EnkfNode.cNamespace().user_get = cwrapper.prototype("bool enkf_node_user_get_no_id(enkf_node , enkf_fs , char* , int, int , c_uint, double*)") -EnkfNode.cNamespace().user_get_vector = cwrapper.prototype("bool enkf_node_user_get_vector( enkf_node , enkf_fs , char*, int, c_uint, double_vector)") +EnkfNode.cNamespace().alloc = cwrapper.prototype("c_void_p enkf_node_alloc(enkf_node)") +EnkfNode.cNamespace().alloc_private = cwrapper.prototype("c_void_p enkf_node_alloc_private_container(enkf_node)") + +# EnkfNode.cNamespace().user_get = cwrapper.prototype("bool enkf_node_user_get_no_id(enkf_node , enkf_fs , char* , int, int , c_uint, double*)") +# EnkfNode.cNamespace().user_get_vector = cwrapper.prototype("bool enkf_node_user_get_vector( enkf_node , enkf_fs , char*, int, c_uint, double_vector)") EnkfNode.cNamespace().value_ptr = cwrapper.prototype("c_void_p enkf_node_value_ptr(enkf_node)") -EnkfNode.cNamespace().vector_storage = cwrapper.prototype("bool enkf_node_vector_storage(enkf_node)") +# EnkfNode.cNamespace().vector_storage = cwrapper.prototype("bool enkf_node_vector_storage(enkf_node)") + +EnkfNode.cNamespace().try_load = cwrapper.prototype("bool enkf_node_try_load(enkf_node, enkf_fs, node_id)") +EnkfNode.cNamespace().get_impl_type = cwrapper.prototype("ert_impl_type_enum enkf_node_get_impl_type(enkf_node)") #todo fix this -EnkfNode.cNamespace().get_config = cwrapper.prototype("c_void_p enkf_node_get_config(enkf_node)") +# EnkfNode.cNamespace().get_config = cwrapper.prototype("c_void_p enkf_node_get_config(enkf_node)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data_config.py index 769e04b68d..86d0f089d1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data_config.py @@ -30,10 +30,10 @@ def get_template_key(self): def get_initial_size(self): return GenDataConfig.cNamespace().get_initial_size(self) - def get_output_format(self): + def getOutputFormat(self): return GenDataConfig.cNamespace().get_output_format(self) - def get_input_format(self): + def getInputFormat(self): return GenDataConfig.cNamespace().get_input_format(self) def free(self): @@ -50,8 +50,8 @@ def free(self): # used outside this scope. GenDataConfig.cNamespace().free = cwrapper.prototype("void gen_data_config_free( gen_data_config )") -GenDataConfig.cNamespace().get_output_format = cwrapper.prototype("c_void_p gen_data_config_get_output_format(gen_data_config)") #todo: fix return type -GenDataConfig.cNamespace().get_input_format = cwrapper.prototype("c_void_p gen_data_config_get_input_format(gen_data_config)") #todo: fix return type +GenDataConfig.cNamespace().get_output_format = cwrapper.prototype("gen_data_file_format_type gen_data_config_get_output_format(gen_data_config)") +GenDataConfig.cNamespace().get_input_format = cwrapper.prototype("gen_data_file_format_type gen_data_config_get_input_format(gen_data_config)") GenDataConfig.cNamespace().get_template_file = cwrapper.prototype("char* gen_data_config_get_template_file(gen_data_config)") GenDataConfig.cNamespace().get_template_key = cwrapper.prototype("char* gen_data_config_get_template_key(gen_data_config)") GenDataConfig.cNamespace().get_initial_size = cwrapper.prototype("int gen_data_config_get_initial_size(gen_data_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py new file mode 100644 index 0000000000..c6e59c8f32 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py @@ -0,0 +1,102 @@ +# Copyright (C) 2012 Statoil ASA, Norway. +# +# The file 'gen_kw.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCClass, CWrapper, CFILE +from ert.enkf import ENKF_LIB +from ert.enkf.data import GenKwConfig + + +class GenKw(BaseCClass): + def __init__(self, gen_kw_config): + """ + @type gen_kw_config: GenKwConfig + """ + c_ptr = GenKw.cNamespace().alloc(gen_kw_config) + super(GenKw, self).__init__(c_ptr) + + def exportParameters(self, file_name): + """ @type: str """ + with open(file_name , "w") as py_file: + cfile = CFILE( py_file ) + GenKw.cNamespace().export_parameters(self, cfile) + + + def exportTemplate(self, file_name): + """ @type: str """ + GenKw.cNamespace().export_template(self, file_name) + + + def __getitem__(self, key): + """ + @type key: int or str + @rtype: float + """ + do_transform = False + if isinstance(key, str): + if not key in self: + raise KeyError("Key %s does not exist" % (key)) + return GenKw.cNamespace().data_get(self, key, do_transform) + elif isinstance(key, int): + if not 0 <= key < len(self): + raise IndexError("Index out of range 0 <= %d < %d" % (key, len(self))) + return GenKw.cNamespace().data_iget(self, key, do_transform) + else: + raise TypeError("Illegal type for indexing, must be int or str, got: %s" % (key)) + + + def __setitem__(self, key, value): + """ + @type key: int or str + @type value: float + """ + if isinstance(key, str): + if not key in self: + raise KeyError("Key %s does not exist" % (key)) + GenKw.cNamespace().data_set(self, key, value) + elif isinstance(key, int): + if not 0 <= key < len(self): + raise IndexError("Index out of range 0 <= %d < %d" % (key, len(self))) + GenKw.cNamespace().data_iset(self, key, value) + else: + raise TypeError("Illegal type for indexing, must be int or str, got: %s" % (key)) + + + def __len__(self): + """ @rtype: int """ + return GenKw.cNamespace().size(self) + + def __contains__(self, item): + return GenKw.cNamespace().has_key(self, item) + + + def free(self): + GenKw.cNamespace().free(self) + + + ################################################################## + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("gen_kw", GenKw) + +GenKw.cNamespace().free = cwrapper.prototype("void gen_kw_free(gen_kw_config)") +GenKw.cNamespace().alloc = cwrapper.prototype("c_void_p gen_kw_alloc(gen_kw_config)") +GenKw.cNamespace().export_parameters = cwrapper.prototype("void gen_kw_write_export_file(gen_kw , FILE)") +GenKw.cNamespace().export_template = cwrapper.prototype("void gen_kw_ecl_write_template(gen_kw , char* )") +GenKw.cNamespace().data_iget = cwrapper.prototype("double gen_kw_data_iget(gen_kw, int, bool)") +GenKw.cNamespace().data_iset = cwrapper.prototype("void gen_kw_data_iset(gen_kw, int, double)") +GenKw.cNamespace().data_get = cwrapper.prototype("double gen_kw_data_get(gen_kw, char*, bool)") +GenKw.cNamespace().data_set = cwrapper.prototype("void gen_kw_data_set(gen_kw, char*, double)") +GenKw.cNamespace().size = cwrapper.prototype("int gen_kw_data_size(gen_kw)") +GenKw.cNamespace().has_key = cwrapper.prototype("bool gen_kw_data_has_key(gen_kw, char*)") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py index 10d885f859..1a963bdce5 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py @@ -19,17 +19,33 @@ class GenKwConfig(BaseCClass): - def __init__(self): - raise NotImplementedError("Class can not be instantiated directly!") + def __init__(self, key, tag_fmt, parameter_file=None): + """ + @type key: str + @type tag_fmt: str + """ + c_ptr = GenKwConfig.cNamespace().alloc_empty(key, tag_fmt) + super(GenKwConfig, self).__init__(c_ptr) - def get_template_file(self): + if parameter_file is not None: + self.setParameterFile(parameter_file) + + def getTemplateFile(self): return GenKwConfig.cNamespace().get_template_file(self) - def get_parameter_file(self): + def getParameterFile(self): return GenKwConfig.cNamespace().get_parameter_file(self) - def alloc_name_list(self): - return GenKwConfig.cNamespace().alloc_name_list(self).setParent(self) + def setParameterFile(self, parameter_file): + GenKwConfig.cNamespace().set_parameter_file(self, parameter_file) + + def getKeyWords(self): + """ @rtype: StringList """ + return GenKwConfig.cNamespace().alloc_name_list(self) + + def shouldUseLogScale(self, index): + """ @rtype: bool """ + return GenKwConfig.cNamespace().should_use_log_scale(self, index) def free(self): GenKwConfig.cNamespace().free(self) @@ -42,6 +58,9 @@ def free(self): cwrapper.registerType("gen_kw_config_ref", GenKwConfig.createCReference) GenKwConfig.cNamespace().free = cwrapper.prototype("void gen_kw_config_free( gen_kw_config )") +GenKwConfig.cNamespace().alloc_empty = cwrapper.prototype("c_void_p gen_kw_config_alloc_empty( char*, char* )") GenKwConfig.cNamespace().get_template_file = cwrapper.prototype("char* gen_kw_config_get_template_file(gen_kw_config)") GenKwConfig.cNamespace().get_parameter_file = cwrapper.prototype("char* gen_kw_config_get_parameter_file(gen_kw_config)") -GenKwConfig.cNamespace().alloc_name_list = cwrapper.prototype("stringlist_ref gen_kw_config_alloc_name_list(gen_kw_config)") +GenKwConfig.cNamespace().set_parameter_file = cwrapper.prototype("void gen_kw_config_set_parameter_file( gen_kw_config, char* )") +GenKwConfig.cNamespace().alloc_name_list = cwrapper.prototype("stringlist_obj gen_kw_config_alloc_name_list(gen_kw_config)") +GenKwConfig.cNamespace().should_use_log_scale = cwrapper.prototype("bool gen_kw_config_should_use_log_scale(gen_kw_config, int)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py index bf8ea64756..08b1ea39c1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py @@ -126,6 +126,14 @@ def clear_static_kw(self): def add_static_kw(self, kw): EclConfig.cNamespace().add_static_kw(self, kw) + #----------------------------------------------------------------- + + def getDepthUnit(self): + return EclConfig.cNamespace().get_depth_unit(self) + + def getPressureUnit(self): + return EclConfig.cNamespace().get_pressure_unit(self) + cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("ecl_config", EclConfig) @@ -168,3 +176,5 @@ def add_static_kw(self, kw): EclConfig.cNamespace().clear_static_kw = cwrapper.prototype("void ecl_config_clear_static_kw(ecl_config)") EclConfig.cNamespace().add_static_kw = cwrapper.prototype("void ecl_config_add_static_kw(ecl_config, char*)") +EclConfig.cNamespace().get_depth_unit = cwrapper.prototype("char* ecl_config_get_depth_unit(ecl_config)") +EclConfig.cNamespace().get_pressure_unit = cwrapper.prototype("char* ecl_config_get_pressure_unit(ecl_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py index 0b29ad137f..6d69928062 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py @@ -14,47 +14,88 @@ # See the GNU General Public License at # for more details. from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import ENKF_LIB, TimeMap -from ert.util import Buffer +from ert.enkf import ENKF_LIB, TimeMap, StateMap +from ert.enkf.enums import EnKFFSType class EnkfFs(BaseCClass): - def __init__(self): - raise NotImplementedError("Class can not be instantiated directly!") + def __init__(self, mount_point): + c_ptr = EnkfFs.cNamespace().mount(mount_point) + super(EnkfFs, self).__init__(c_ptr) - def has_node(self, node_key, var_type, report_step, iens, state): - return EnkfFs.cNamespace().has_node(self, node_key, var_type, report_step, iens, state) + self.__umounted = False # Keep track of umounting so we only do it once - def has_vector(self, node_key, var_type, iens, state): - return EnkfFs.cNamespace().has_vector(self, node_key, var_type, iens, state) - - def fread_node(self, key, type, step, member, value): - buffer = Buffer(100) - EnkfFs.cNamespace().fread_node(self, buffer, key, type, step, member, value) - - def fread_vector(self, key, type, member, value): - buffer = Buffer(100) - EnkfFs.cNamespace().fread_vector(self, buffer, key, type, member, value) - - def get_time_map(self): + @classmethod + def createCReference(cls, c_pointer, parent=None): + obj = super(EnkfFs, cls).createCReference(c_pointer, parent) + obj.__umounted = False + return obj + + + # def has_node(self, node_key, var_type, report_step, iens, state): + # return EnkfFs.cNamespace().has_node(self, node_key, var_type, report_step, iens, state) + # + # def has_vector(self, node_key, var_type, iens, state): + # return EnkfFs.cNamespace().has_vector(self, node_key, var_type, iens, state) + # + # + # def fread_node(self, key, type, step, member, value): + # buffer = Buffer(100) + # EnkfFs.cNamespace().fread_node(self, buffer, key, type, step, member, value) + # + # def fread_vector(self, key, type, member, value): + # buffer = Buffer(100) + # EnkfFs.cNamespace().fread_vector(self, buffer, key, type, member, value) + + def getTimeMap(self): + """ @rtype: TimeMap """ + self.__checkIfUmounted() return EnkfFs.cNamespace().get_time_map(self).setParent(self) + def getStateMap(self): + """ @rtype: StateMap """ + self.__checkIfUmounted() + return EnkfFs.cNamespace().get_state_map(self).setParent(self) + def getCaseName(self): """ @rtype: str """ + self.__checkIfUmounted() return EnkfFs.cNamespace().get_case_name(self) def isReadOnly(self): """ @rtype: bool """ + self.__checkIfUmounted() return EnkfFs.cNamespace().is_read_only(self) + + def refCount(self): + self.__checkIfUmounted() + return self.cNamespace().get_refcount(self) + + @classmethod def exists(cls, path): return cls.cNamespace().exists(path) - def free(self): - EnkfFs.cNamespace().umount(self) + @classmethod + def createFileSystem(cls, path, fs_type, arg=None): + assert isinstance(path, str) + assert isinstance(fs_type, EnKFFSType) + cls.cNamespace().create(path, fs_type, arg) + + def __checkIfUmounted(self): + if self.__umounted: + raise AssertionError("The EnkfFs instance has been umounted!") + + def umount(self): + if not self.__umounted: + EnkfFs.cNamespace().decref(self) + self.__umounted = True + + def free(self): + self.umount() cwrapper = CWrapper(ENKF_LIB) @@ -62,12 +103,16 @@ def free(self): cwrapper.registerType("enkf_fs_obj", EnkfFs.createPythonObject) cwrapper.registerType("enkf_fs_ref", EnkfFs.createCReference) -EnkfFs.cNamespace().umount = cwrapper.prototype("void enkf_fs_umount(enkf_fs)") +EnkfFs.cNamespace().mount = cwrapper.prototype("c_void_p enkf_fs_mount(char* )") +EnkfFs.cNamespace().create = cwrapper.prototype("void enkf_fs_create_fs(char* , enkf_fs_type_enum , c_void_p)") +EnkfFs.cNamespace().decref = cwrapper.prototype("int enkf_fs_decref(enkf_fs)") +EnkfFs.cNamespace().get_refcount = cwrapper.prototype("int enkf_fs_get_refcount(enkf_fs)") EnkfFs.cNamespace().has_node = cwrapper.prototype("bool enkf_fs_has_node(enkf_fs, char*, c_uint, int, int, c_uint)") EnkfFs.cNamespace().has_vector = cwrapper.prototype("bool enkf_fs_has_vector(enkf_fs, char*, c_uint, int, c_uint)") EnkfFs.cNamespace().fread_node = cwrapper.prototype("void enkf_fs_fread_node(enkf_fs, buffer, char*, c_uint, int, int, c_uint)") EnkfFs.cNamespace().fread_vector = cwrapper.prototype("void enkf_fs_fread_vector(enkf_fs, buffer, char*, c_uint, int, c_uint)") EnkfFs.cNamespace().get_time_map = cwrapper.prototype("time_map_ref enkf_fs_get_time_map(enkf_fs)") +EnkfFs.cNamespace().get_state_map = cwrapper.prototype("state_map_ref enkf_fs_get_state_map(enkf_fs)") EnkfFs.cNamespace().exists = cwrapper.prototype("bool enkf_fs_exists(char*)") EnkfFs.cNamespace().get_case_name = cwrapper.prototype("char* enkf_fs_get_case_name(enkf_fs)") EnkfFs.cNamespace().is_read_only = cwrapper.prototype("bool enkf_fs_is_read_only(enkf_fs)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs_manager.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs_manager.py index cb66000f34..5b550d9921 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs_manager.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs_manager.py @@ -1,106 +1,210 @@ +import os.path from ert.cwrap import CWrapper, BaseCClass -from ert.enkf import ENKF_LIB, EnkfFs, EnkfStateType, StateMap +from ert.enkf import ENKF_LIB, EnkfFs, EnkfStateType, StateMap, TimeMap from ert.util import StringList +class FileSystemRotator(object): + def __init__(self, capacity): + super(FileSystemRotator, self).__init__() + self.__capacity = capacity + """:type: int""" + self.__fs_list = [] + """:type: list of str""" + self.__fs_map = {} + """:type: dict[str, EnkfFs]""" + + def __len__(self): + return len(self.__fs_list) + + def addFileSystem(self, file_system, full_name): + if self.atCapacity(): + self.dropOldestFileSystem() + + self.__fs_list.append(full_name) + self.__fs_map[full_name] = file_system + + def dropOldestFileSystem(self): + if len(self.__fs_list) > 0: + case_name = self.__fs_list[0] + fs = self.__fs_map[case_name] + fs.umount() + del self.__fs_list[0] + del self.__fs_map[case_name] + + print("Dropped filesystem: %s" % case_name) + + def atCapacity(self): + return len(self.__fs_list) == self.__capacity + + def __contains__(self, full_case_name): + return full_case_name in self.__fs_list + + def __getitem__(self, case): + """ @rtype: EnkfFs """ + if isinstance(case, str): + return self.__fs_map[case] + elif isinstance(case, int) and 0 <= case < len(self): + case_name = self.__fs_list[case] + return self.__fs_map[case_name] + else: + raise IndexError("Value '%s' is not a proper index or case name." % case) + + + def umountAll(self): + while len(self.__fs_list) > 0: + self.dropOldestFileSystem() + + + +# For normal use from ert all filesystems will be located in the same +# folder in the filesystem - corresponding to the ENSPATH setting in +# the config file; in this implementation that setting is stored in +# the @mount_root field. Currently @mount_root is fixed to the value +# returned by EnKFMain.getMountPoint(), but in principle a different +# path could be sent as the the optional second argument to the +# getFS() method. + class EnkfFsManager(BaseCClass): + DEFAULT_CAPACITY = 5 - def __init__(self, enkf_main): + def __init__(self, enkf_main, capacity=DEFAULT_CAPACITY): assert isinstance(enkf_main, BaseCClass) super(EnkfFsManager, self).__init__(enkf_main.from_param(enkf_main).value, parent=enkf_main, is_reference=True) - self.__cached_file_systems = {} - """ @type: dict of (str, EnkfFs) """ + self.__fs_rotator = FileSystemRotator(capacity) + self.__mount_root = enkf_main.getMountPoint() - def isCaseInitialized(self, case): - return EnkfFsManager.cNamespace().is_case_initialized(self, case, None) + self.__fs_type = enkf_main.getModelConfig().getFSType() + self.__fs_arg = None + + self.getCurrentFileSystem() + + def __createFullCaseName(self, mount_root, case_name): + return os.path.join(mount_root, case_name) + + + def getFileSystem(self, case_name, mount_root=None): + """ + @rtype: EnkfFs + """ + if mount_root is None: + mount_root = self.__mount_root + + full_case_name = self.__createFullCaseName(mount_root, case_name) + + if not full_case_name in self.__fs_rotator: + if not EnkfFs.exists(full_case_name): + if self.__fs_rotator.atCapacity(): + self.__fs_rotator.dropOldestFileSystem() + + EnkfFs.createFileSystem(full_case_name, self.__fs_type, self.__fs_arg) + + new_fs = EnkfFs(full_case_name) + self.__fs_rotator.addFileSystem(new_fs, full_case_name) - def selectFileSystem(self, path): - EnkfFsManager.cNamespace().select_fs(self, path) + fs = self.__fs_rotator[full_case_name] - # def fs_exists(self, case): - # """ @rtype: bool """ - # return EnkfFsManager.cNamespace().fs_exists(self, case) - # - # def get_alt_fs(self, fs, read_only, create): - # """ @rtype: EnkfFs """ - # return EnkfFsManager.cNamespace().get_alt_fs(self, fs, read_only, create).setParent(self) + return fs + + + def getCurrentFileSystem(self): + """ Returns the currently selected file system + @rtype: EnkfFs + """ + current_fs = EnkfFsManager.cNamespace().get_current_fs(self) + case_name = current_fs.getCaseName() + full_name = self.__createFullCaseName(self.__mount_root, case_name) + + if not full_name in self.__fs_rotator: + self.__fs_rotator.addFileSystem(current_fs, full_name) + else: + current_fs.umount() + + return self.getFileSystem(case_name, self.__mount_root) + + + def umount(self): + self.__fs_rotator.umountAll() + + + def getFileSystemCount(self): + return len(self.__fs_rotator) + + + def switchFileSystem(self, file_system): + assert isinstance(file_system, EnkfFs) + EnkfFsManager.cNamespace().switch_fs(self, file_system, None) + + + def isCaseInitialized(self, case): + return EnkfFsManager.cNamespace().is_case_initialized(self, case, None) def isInitialized(self): """ @rtype: bool """ return EnkfFsManager.cNamespace().is_initialized(self, None) # what is the bool_vector mask??? - def getFileSystem(self): - """ @rtype: EnkfFs """ - return EnkfFsManager.cNamespace().get_fs(self).setParent(self) def getCaseList(self): """ @rtype: StringList """ return EnkfFsManager.cNamespace().alloc_caselist(self) - # def getCurrentFileSystem(self): - # """ @rtype: str """ - # return EnkfFsManager.cNamespace().get_current_fs(self) - def userSelectFileSystem(self, input_case): - EnkfFsManager.cNamespace().user_select_fs(self, input_case) + def customInitializeCurrentFromExistingCase(self, source_case, source_report_step, source_state, member_mask, + node_list): + assert isinstance(source_state, EnkfStateType) + source_case_fs = self.getFileSystem(source_case) + EnkfFsManager.cNamespace().custom_initialize_from_existing(self, source_case_fs, source_report_step, + source_state, node_list, member_mask) + def initializeCurrentCaseFromExisting(self, source_fs, source_report_step, source_state): + assert isinstance(source_state, EnkfStateType) + assert isinstance(source_fs, EnkfFs); + EnkfFsManager.cNamespace().initialize_current_case_from_existing(self, source_fs, source_report_step, + source_state) - def initializeFromExistingCase(self, source_case, source_report_step, source_state, member_mask, ranking_key, node_list): + def initializeCaseFromExisting(self, source_fs, source_report_step, source_state, target_fs): assert isinstance(source_state, EnkfStateType) - EnkfFsManager.cNamespace().initialize_from_existing(self, source_case, source_report_step, source_state, member_mask, ranking_key, node_list) + assert isinstance(source_fs, EnkfFs); + assert isinstance(target_fs, EnkfFs); + EnkfFsManager.cNamespace().initialize_case_from_existing(self, source_fs, source_report_step, source_state, + target_fs) def initializeFromScratch(self, parameter_list, iens1, iens2, force_init=True): EnkfFsManager.cNamespace().initialize_from_scratch(self, parameter_list, iens1, iens2, force_init) - # def set_case_table(self, case_table_file): - # EnkfFsManager.cNamespace().set_case_table(self, case_table_file) - def mountAlternativeFileSystem(self, case, read_only, create): - """ @rtype: EnkfFs """ - assert isinstance(case, str) - assert isinstance(read_only, bool) - assert isinstance(create, bool) + def isCaseMounted(self, case_name, mount_root=None): + if mount_root is None: + mount_root = self.__mount_root - if case in self.__cached_file_systems and not read_only: - fs = self.__cached_file_systems[case] + full_case_name = self.__createFullCaseName(mount_root, case_name) - if fs.isReadOnly(): - print("Removed a read only file system from cache: %s" % case) - del self.__cached_file_systems[case] - - if not case in self.__cached_file_systems: - print("Added a file system to cache: %s" % case) - self.__cached_file_systems[case] = EnkfFsManager.cNamespace().mount_alt_fs(self, case, read_only, create) - else: - print("Provided a file system from cache: %s" % case) - - return self.__cached_file_systems[case] - - - def switchFileSystem(self, files_system): - assert isinstance(files_system, EnkfFs) - EnkfFsManager.cNamespace().switch_fs(self, files_system, None) + return full_case_name in self.__fs_rotator def getStateMapForCase(self, case): """ @rtype: StateMap """ assert isinstance(case, str) - return EnkfFsManager.cNamespace().alloc_readonly_state_map(self, case) + if self.isCaseMounted(case): + fs = self.getFileSystem(case) + return fs.getStateMap() + else: + return EnkfFsManager.cNamespace().alloc_readonly_state_map(self, case) + def getTimeMapForCase(self, case): + """ @rtype: TimeMap """ + assert isinstance(case, str) + return EnkfFsManager.cNamespace().alloc_readonly_time_map(self, case) cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("enkf_fs_manager", EnkfFsManager) -EnkfFsManager.cNamespace().get_fs = cwrapper.prototype("enkf_fs_ref enkf_main_get_fs(enkf_fs_manager)") -EnkfFsManager.cNamespace().mount_alt_fs = cwrapper.prototype("enkf_fs_ref enkf_main_mount_alt_fs(enkf_fs_manager, char*, bool, bool)") +EnkfFsManager.cNamespace().get_current_fs = cwrapper.prototype("enkf_fs_ref enkf_main_get_fs_ref(enkf_fs_manager)") EnkfFsManager.cNamespace().switch_fs = cwrapper.prototype("void enkf_main_set_fs(enkf_fs_manager, enkf_fs, char*)") -EnkfFsManager.cNamespace().user_select_fs = cwrapper.prototype("void enkf_main_user_select_fs(enkf_fs_manager, char*)") -# EnkfFsManager.cNamespace().get_current_fs = cwrapper.prototype("char* enkf_main_get_current_fs(enkf_fs_manager)") -EnkfFsManager.cNamespace().select_fs = cwrapper.prototype("void enkf_main_select_fs(enkf_fs_manager, char*)") EnkfFsManager.cNamespace().fs_exists = cwrapper.prototype("bool enkf_main_fs_exists(enkf_fs_manager, char*)") EnkfFsManager.cNamespace().alloc_caselist = cwrapper.prototype("stringlist_obj enkf_main_alloc_caselist(enkf_fs_manager)") EnkfFsManager.cNamespace().set_case_table = cwrapper.prototype("void enkf_main_set_case_table(enkf_fs_manager, char*)") @@ -108,7 +212,10 @@ def getStateMapForCase(self, case): EnkfFsManager.cNamespace().initialize_from_scratch = cwrapper.prototype("void enkf_main_initialize_from_scratch(enkf_fs_manager, stringlist, int, int, bool)") EnkfFsManager.cNamespace().is_initialized = cwrapper.prototype("bool enkf_main_is_initialized(enkf_fs_manager, bool_vector)") EnkfFsManager.cNamespace().is_case_initialized = cwrapper.prototype("bool enkf_main_case_is_initialized(enkf_fs_manager, char*, bool_vector)") -EnkfFsManager.cNamespace().initialize_from_existing = cwrapper.prototype("void enkf_main_initialize_from_existing__(enkf_fs_manager, char*, int, enkf_state_type_enum, bool_vector, char*, stringlist)") +EnkfFsManager.cNamespace().initialize_current_case_from_existing = cwrapper.prototype("void enkf_main_init_current_case_from_existing(enkf_fs_manager, enkf_fs, int, enkf_state_type_enum)") +EnkfFsManager.cNamespace().initialize_case_from_existing = cwrapper.prototype("void enkf_main_init_case_from_existing(enkf_fs_manager, enkf_fs, int, enkf_state_type_enum, enkf_fs)") +EnkfFsManager.cNamespace().custom_initialize_from_existing = cwrapper.prototype("void enkf_main_init_current_case_from_existing_custom(enkf_fs_manager, enkf_fs, int, enkf_state_type_enum, stringlist, bool_vector)") EnkfFsManager.cNamespace().alloc_readonly_state_map = cwrapper.prototype("state_map_obj enkf_main_alloc_readonly_state_map(enkf_fs_manager, char*)") +EnkfFsManager.cNamespace().alloc_readonly_time_map = cwrapper.prototype("time_map_obj enkf_main_alloc_readonly_time_map(enkf_fs_manager, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_linalg.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_linalg.py new file mode 100644 index 0000000000..d016cc2f68 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_linalg.py @@ -0,0 +1,32 @@ +from ert.cwrap import CWrapper, CNamespace +from ert.enkf import ENKF_LIB +from ert.util import Matrix , DoubleVector + + +class EnkfLinalg(object): + __namespace = CNamespace("EnkfLinalg") + + @classmethod + def calculatePrincipalComponents(cls, S0, D_obs, truncation, ncomp, PC, PC_obs, singular_values): + assert isinstance(S0, Matrix) + assert isinstance(D_obs, Matrix) + assert isinstance(truncation, (float, int)) + assert isinstance(ncomp, int) + assert isinstance(PC, Matrix) + assert isinstance(PC_obs, Matrix) + assert isinstance(singular_values , DoubleVector) + + EnkfLinalg.cNamespace().get_PC(S0, D_obs, truncation, ncomp, PC, PC_obs , singular_values) + + @classmethod + def cNamespace(cls): + return EnkfLinalg.__namespace + + + +cwrapper = CWrapper(ENKF_LIB) + +EnkfLinalg.cNamespace().get_PC = cwrapper.prototype("void enkf_linalg_get_PC(matrix, matrix, double, int, matrix, matrix, double_vector)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py index 9a7793c4af..81cce4598e 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py @@ -15,7 +15,7 @@ # for more details. from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import AnalysisConfig, EclConfig, EnkfObs, EnKFState, LocalConfig, ModelConfig, EnsConfig, PlotConfig, SiteConfig, ENKF_LIB, EnkfSimulationRunner, EnkfFsManager, ErtWorkflowList +from ert.enkf import AnalysisConfig, EclConfig, EnkfObs, EnKFState, LocalConfig, ModelConfig, EnsConfig, PlotConfig, SiteConfig, ENKF_LIB, EnkfSimulationRunner, EnkfFsManager, ErtWorkflowList, PostSimulationHook from ert.util import SubstitutionList, Log @@ -28,13 +28,29 @@ def __init__(self, model_config, site_config, strict=True): self.__fs_manager = EnkfFsManager(self) + @classmethod + def createCReference(cls, c_pointer, parent=None): + obj = super(EnKFMain, cls).createCReference(c_pointer, parent) + obj.__simulation_runner = EnkfSimulationRunner(obj) + obj.__fs_manager = EnkfFsManager(obj) + return obj + + + @staticmethod + def createNewConfig(config_file, storage_path, case_name, dbase_type, num_realizations): + EnKFMain.cNamespace().create_new_config(config_file, storage_path, case_name, dbase_type, num_realizations) + def set_eclbase(self, eclbase): EnKFMain.cNamespace().set_eclbase(self, eclbase) + def umount(self): + self.__fs_manager.umount() + def free(self): + self.umount() EnKFMain.cNamespace().free(self) - def getEnsembleSize( self ): + def getEnsembleSize(self): """ @rtype: int """ return EnKFMain.cNamespace().get_ensemble_size(self) @@ -69,13 +85,10 @@ def eclConfig(self): """ @rtype: EclConfig """ return EnKFMain.cNamespace().get_ecl_config(self).setParent(self) - def plot_config(self): + def plotConfig(self): """ @rtype: PlotConfig """ return EnKFMain.cNamespace().get_plot_config(self).setParent(self) - def set_eclbase(self, eclbase): - EnKFMain.cNamespace().set_eclbase(self, eclbase) - def set_datafile(self, datafile): EnKFMain.cNamespace().set_datafile(self, datafile) @@ -97,6 +110,8 @@ def addDataKW(self, key, value): EnKFMain.cNamespace().add_data_kw(self, key, value) + def getMountPoint(self): + return EnKFMain.cNamespace().get_mount_point(self) def del_node(self, key): @@ -134,17 +149,15 @@ def get_site_config_file(self): site_conf_file = EnKFMain.cNamespace().get_site_config_file(self) return site_conf_file + def getUserConfigFile(self): + """ @rtype: str """ + config_file = EnKFMain.cNamespace().get_user_config_file(self) + return config_file + def getHistoryLength(self): return EnKFMain.cNamespace().get_history_length(self) - - def copy_ensemble(self, source_case, source_report_step, source_state, target_case, target_report_step, - target_state, member_mask, ranking_key, node_list): - EnKFMain.cNamespace().copy_ensemble(self, source_case, source_report_step, source_state, target_case, target_report_step, - target_state, member_mask, ranking_key, node_list) - - def getMemberRunningState(self, ensemble_member): """ @rtype: EnKFState """ return EnKFMain.cNamespace().iget_state(self, ensemble_member).setParent(self) @@ -155,11 +168,6 @@ def get_observations(self, user_key, obs_count, obs_x, obs_y, obs_std): def get_observation_count(self, user_key): return EnKFMain.cNamespace().get_observation_count(self, user_key) - - def createNewConfig(self, storage_path, case_name, dbase_type, num_realizations): - EnKFMain.cNamespace().create_new_config(self, storage_path, case_name, dbase_type, num_realizations) - - def getEnkfSimulationRunner(self): """ @rtype: EnkfSimulationRunner """ return self.__simulation_runner @@ -172,10 +180,34 @@ def getWorkflowList(self): """ @rtype: ErtWorkflowList """ return EnKFMain.cNamespace().get_workflow_list(self).setParent(self) + def getPostSimulationHook(self): + """ @rtype: PostSimulationHook """ + return EnKFMain.cNamespace().get_qc_module(self) + + + def exportField(self, keyword, path, iactive, file_type, report_step, state, enkfFs): + """ + @type keyword: str + @type path: str + @type iactive: BoolVector + @type file_type: EnkfFieldFileFormatEnum + @type report_step: int + @type state: EnkfStateType + @type enkfFs: EnkfFs + + """ + assert isinstance(keyword, str) + return EnKFMain.cNamespace().export_field_with_fs(self, keyword, path, iactive, file_type, report_step, state, enkfFs) + + def loadFromForwardModel(self, realization, iteration, fs): + EnKFMain.cNamespace().load_from_forward_model(self, iteration, realization, fs) + + ################################################################## cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("enkf_main", EnKFMain) +cwrapper.registerType("enkf_main_ref", EnKFMain.createCReference) EnKFMain.cNamespace().bootstrap = cwrapper.prototype("c_void_p enkf_main_bootstrap(char*, char*, bool, bool)") @@ -212,18 +244,22 @@ def getWorkflowList(self): EnKFMain.cNamespace().get_site_config_file = cwrapper.prototype("char* enkf_main_get_site_config_file(enkf_main)") EnKFMain.cNamespace().get_history_length = cwrapper.prototype("int enkf_main_get_history_length(enkf_main)") -EnKFMain.cNamespace().copy_ensemble = cwrapper.prototype("void enkf_main_copy_ensemble(enkf_main, char*, int, int, char*, int, int, bool_vector, char*, stringlist)") EnKFMain.cNamespace().get_observations = cwrapper.prototype("void enkf_main_get_observations(enkf_main, char*, int, long*, double*, double*)") EnKFMain.cNamespace().get_observation_count = cwrapper.prototype("int enkf_main_get_observation_count(enkf_main, char*)") EnKFMain.cNamespace().iget_state = cwrapper.prototype("enkf_state_ref enkf_main_iget_state(enkf_main, int)") -EnKFMain.cNamespace().get_logh = cwrapper.prototype("log_ref enkf_main_get_logh( enkf_main )") - EnKFMain.cNamespace().get_workflow_list = cwrapper.prototype("ert_workflow_list_ref enkf_main_get_workflow_list(enkf_main)") +EnKFMain.cNamespace().get_qc_module = cwrapper.prototype("qc_module_ref enkf_main_get_qc_module(enkf_main)") EnKFMain.cNamespace().fprintf_config = cwrapper.prototype("void enkf_main_fprintf_config(enkf_main)") EnKFMain.cNamespace().create_new_config = cwrapper.prototype("void enkf_main_create_new_config(char* , char*, char* , char* , int)") +EnKFMain.cNamespace().get_user_config_file = cwrapper.prototype("char* enkf_main_get_user_config_file(enkf_main)") +EnKFMain.cNamespace().get_mount_point = cwrapper.prototype("char* enkf_main_get_mount_root( enkf_main )") + +EnKFMain.cNamespace().export_field = cwrapper.prototype("bool enkf_main_export_field(enkf_main, char*, char*, bool_vector, enkf_field_file_format_enum, int, enkf_state_type_enum)") +EnKFMain.cNamespace().export_field_with_fs = cwrapper.prototype("bool enkf_main_export_field_with_fs(enkf_main, char*, char*, bool_vector, enkf_field_file_format_enum, int, enkf_state_type_enum, enkf_fs_manager)") +EnKFMain.cNamespace().load_from_forward_model = cwrapper.prototype("void enkf_main_load_from_forward_model_from_gui(enkf_main, int, bool_vector, enkf_fs)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_obs.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_obs.py index 76098d448d..ebdee60999 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_obs.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_obs.py @@ -1,4 +1,4 @@ -# Copyright (C) 2012 Statoil ASA, Norway. +# Copyright (C) 2012 Statoil ASA, Norway. # # The file 'enkf_obs.py' is part of ERT - Ensemble based Reservoir Tool. # @@ -14,17 +14,45 @@ # See the GNU General Public License at # for more details. from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import ENKF_LIB +from ert.enkf import ENKF_LIB, EnkfFs, LocalObsdata, MeasData, ObsData +from ert.enkf.enums import EnkfStateType -from ert.util import StringList from ert.enkf.observations import ObsVector +from ert.util import StringList, IntVector class EnkfObs(BaseCClass): - def __init__(self): raise NotImplementedError("Class can not be instantiated directly!") + + def __len__(self): + return EnkfObs.cNamespace().get_size(self) + + + def __iter__(self): + iobs = 0 + while iobs < len(self): + vector = self[iobs] + yield vector + iobs += 1 + + + def __getitem__(self, key_or_index): + """ @rtype: ObsVector """ + if isinstance(key_or_index, str): + if self.hasKey(key_or_index): + return EnkfObs.cNamespace().get_vector(self, key_or_index).setParent(self) + else: + raise KeyError("Unknown key: %s" % key_or_index) + elif isinstance(key_or_index, int): + if 0 <= key_or_index < len(self): + return EnkfObs.cNamespace().iget_vector(self, key_or_index).setParent(self) + else: + raise IndexError("Index must be in range: 0 <= %d < %d" % (key_or_index, len(self))) + else: + raise TypeError("Key or index must be of type str or int") + def get_config_file(self): """ @rtype: Str """ return EnkfObs.cNamespace().get_config_file(self) @@ -40,15 +68,12 @@ def hasKey(self, key): """ @rtype: bool """ return EnkfObs.cNamespace().has_key(self, key) - def getObservationsVector(self, key): - """ @rtype: ObsVector """ - assert isinstance(key, str) - return EnkfObs.cNamespace().get_vector(self, key).setParent(self) def getObservationTime(self, index): - """ @rtype: ctime """ + """ @rtype: CTime """ return EnkfObs.cNamespace().iget_obs_time(self, index) + def addObservationVector(self, observation_key, observation_vector): assert isinstance(observation_key, str) assert isinstance(observation_vector, ObsVector) @@ -57,6 +82,17 @@ def addObservationVector(self, observation_key, observation_vector): EnkfObs.cNamespace().add_obs_vector(self, observation_key, observation_vector) + def getObservationAndMeasureData(self, fs, local_obsdata, state, active_list, meas_data, obs_data): + assert isinstance(fs, EnkfFs) + assert isinstance(local_obsdata, LocalObsdata) + assert isinstance(state, EnkfStateType) + assert isinstance(active_list, IntVector) + assert isinstance(meas_data, MeasData) + assert isinstance(obs_data, ObsData) + + EnkfObs.cNamespace().get_obs_and_measure_data(self, fs, local_obsdata, state, active_list, meas_data, obs_data) + + def free(self): EnkfObs.cNamespace().free(self) @@ -66,10 +102,14 @@ def free(self): cwrapper.registerType("enkf_obs_obj", EnkfObs.createPythonObject) cwrapper.registerType("enkf_obs_ref", EnkfObs.createCReference) -EnkfObs.cNamespace().free = cwrapper.prototype("void enkf_obs_free( enkf_obs )") -EnkfObs.cNamespace().get_config_file = cwrapper.prototype("char* enkf_obs_get_config_file( enkf_obs )") +EnkfObs.cNamespace().free = cwrapper.prototype("void enkf_obs_free( enkf_obs )") +EnkfObs.cNamespace().get_size = cwrapper.prototype("int enkf_obs_get_size( enkf_obs )") +EnkfObs.cNamespace().get_config_file = cwrapper.prototype("char* enkf_obs_get_config_file( enkf_obs )") EnkfObs.cNamespace().alloc_typed_keylist = cwrapper.prototype("stringlist_obj enkf_obs_alloc_typed_keylist(enkf_obs, enkf_obs_impl_type)") -EnkfObs.cNamespace().has_key = cwrapper.prototype("bool enkf_obs_has_key(enkf_obs, char*)") -EnkfObs.cNamespace().get_vector = cwrapper.prototype("obs_vector_ref enkf_obs_get_vector(enkf_obs, char*)") -EnkfObs.cNamespace().iget_obs_time = cwrapper.prototype("time_t enkf_obs_iget_obs_time(enkf_obs, int)") -EnkfObs.cNamespace().add_obs_vector = cwrapper.prototype("void enkf_obs_add_obs_vector(enkf_obs, char*, obs_vector)") +EnkfObs.cNamespace().has_key = cwrapper.prototype("bool enkf_obs_has_key(enkf_obs, char*)") +EnkfObs.cNamespace().get_vector = cwrapper.prototype("obs_vector_ref enkf_obs_get_vector(enkf_obs, char*)") +EnkfObs.cNamespace().iget_vector = cwrapper.prototype("obs_vector_ref enkf_obs_iget_vector(enkf_obs, int)") +EnkfObs.cNamespace().iget_obs_time = cwrapper.prototype("time_t enkf_obs_iget_obs_time(enkf_obs, int)") +EnkfObs.cNamespace().add_obs_vector = cwrapper.prototype("void enkf_obs_add_obs_vector(enkf_obs, char*, obs_vector)") + +EnkfObs.cNamespace().get_obs_and_measure_data = cwrapper.prototype("void enkf_obs_get_obs_and_measure_data(enkf_obs, enkf_fs, local_obsdata, enkf_state_type_enum, int_vector, meas_data, obs_data)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_simulation_runner.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_simulation_runner.py index 793f52912d..a7de1da1f2 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_simulation_runner.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_simulation_runner.py @@ -1,5 +1,5 @@ from ert.cwrap import CWrapper, BaseCClass -from ert.enkf import ENKF_LIB, EnkfStateType, EnkfFs +from ert.enkf import ENKF_LIB, EnkfFs from ert.enkf.enums import EnkfInitModeEnum from ert.util import BoolVector @@ -9,25 +9,29 @@ class EnkfSimulationRunner(BaseCClass): def __init__(self, enkf_main): assert isinstance(enkf_main, BaseCClass) super(EnkfSimulationRunner, self).__init__(enkf_main.from_param(enkf_main).value, parent=enkf_main, is_reference=True) + self.ert = enkf_main + """:type: EnKFMain """ - def runSimpleStep(self, active_realization_mask, initialization_mode): + def runSimpleStep(self, active_realization_mask, initialization_mode, iter_nr): """ @rtype: bool """ assert isinstance(active_realization_mask, BoolVector) assert isinstance(initialization_mode, EnkfInitModeEnum) - return EnkfSimulationRunner.cNamespace().run_simple_step(self, active_realization_mask, initialization_mode) + return EnkfSimulationRunner.cNamespace().run_simple_step(self, active_realization_mask, initialization_mode , iter_nr) + - def iterateSmoother(self, iteration_number, target_case_name, active_realization_mask): - """ @rtype: bool """ - assert isinstance(active_realization_mask, BoolVector) - return EnkfSimulationRunner.cNamespace().iterate_smoother(self , iteration_number , target_case_name , active_realization_mask) - - def runEnsembleExperiment(self, active_realization_mask): """ @rtype: bool """ - return self.runSimpleStep(active_realization_mask , EnkfInitModeEnum.INIT_CONDITIONAL) + iter_nr = 0 + return self.runSimpleStep(active_realization_mask, EnkfInitModeEnum.INIT_CONDITIONAL, iter_nr) + def runPostWorkflow(self): - EnkfSimulationRunner.cNamespace().run_post_workflow(self) + post_simulation_hook = self.ert.getPostSimulationHook() + if post_simulation_hook.hasWorkflow(): + post_simulation_hook.checkRunpathListFile() + workflow = post_simulation_hook.getWorkflow() + workflow_list = self.ert.getWorkflowList() + workflow.run(self.ert, context=workflow_list.getContext()) def smootherUpdate(self, target_fs): @@ -36,27 +40,6 @@ def smootherUpdate(self, target_fs): return EnkfSimulationRunner.cNamespace().smoother_update(self, target_fs) - # def run(self, boolPtr, init_step_parameter, simFrom, state, mode): - # #{"ENKF_ASSIMILATION" : 1, "ENSEMBLE_EXPERIMENT" : 2, "ENSEMBLE_PREDICTION" : 3, "INIT_ONLY" : 4, "SMOOTHER" : 5} - # if mode == 1: - # EnKFMain.cNamespace().run_assimilation(self, boolPtr, init_step_parameter, simFrom, state) - # - # if mode == 2: - # EnKFMain.cNamespace().run_exp(self, boolPtr, True, init_step_parameter, simFrom, state, True) - # - # if mode == 4: - # EnKFMain.cNamespace().run_exp(self, boolPtr, False, init_step_parameter, simFrom, state , True) - # - # if mode == 5: - # EnKFMain.cNamespace().run_smoother(self, "AUTOSMOOTHER", True) - - # def runIteratedEnsembleSmoother(self, last_report_step): - # #warn: Remember to select correct analysis module RML - # EnKFMain.cNamespace().run_iterated_ensemble_smoother(self, last_report_step) - # - # def runOneMoreIteration(self, last_report_step): - # #warn: need some way of validating that the case has run - # EnKFMain.cNamespace().run_one_more_iteration(self, last_report_step) cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("enkf_simulation_runner", EnkfSimulationRunner) @@ -64,7 +47,5 @@ def smootherUpdate(self, target_fs): EnkfSimulationRunner.cNamespace().run_assimilation = cwrapper.prototype("void enkf_main_run_assimilation(enkf_simulation_runner, bool_vector, int, int, int)") EnkfSimulationRunner.cNamespace().run_smoother = cwrapper.prototype("void enkf_main_run_smoother(enkf_simulation_runner, char*, bool)") -EnkfSimulationRunner.cNamespace().run_simple_step = cwrapper.prototype("bool enkf_main_run_simple_step(enkf_simulation_runner, bool_vector, enkf_init_mode_enum)") +EnkfSimulationRunner.cNamespace().run_simple_step = cwrapper.prototype("bool enkf_main_run_simple_step(enkf_simulation_runner, bool_vector, enkf_init_mode_enum, int)") EnkfSimulationRunner.cNamespace().smoother_update = cwrapper.prototype("bool enkf_main_smoother_update(enkf_simulation_runner, enkf_fs)") -EnkfSimulationRunner.cNamespace().run_post_workflow = cwrapper.prototype("void enkf_main_run_post_workflow(enkf_simulation_runner)") -EnkfSimulationRunner.cNamespace().iterate_smoother = cwrapper.prototype("bool enkf_main_iterate_smoother(enkf_simulation_runner, int, char*, bool_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ens_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ens_config.py index 0a4eb9ea3e..d73c428946 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ens_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ens_config.py @@ -44,9 +44,12 @@ def add_gen_kw(self, key): """ @rtype: EnkfConfigNode """ return EnsConfig.cNamespace().add_gen_kw(self, key).setParent(self) - def add_gen_data(self, key): - """ @rtype: EnkfConfigNode """ - return EnsConfig.cNamespace().add_gen_data(self, key).setParent(self) + + def addNode(self , config_node): + assert isinstance(config_node , EnkfConfigNode) + EnsConfig.cNamespace().add_node( self , config_node ) + config_node.setParent( self ) + def add_field(self, key, eclipse_grid): """ @rtype: EnkfConfigNode """ @@ -66,6 +69,7 @@ def free(self): EnsConfig.cNamespace().free(self) + cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("ens_config", EnsConfig) cwrapper.registerType("ens_config_obj", EnsConfig.createPythonObject) @@ -77,7 +81,7 @@ def free(self): EnsConfig.cNamespace().alloc_keylist = cwrapper.prototype("stringlist_obj ensemble_config_alloc_keylist( ens_config )") EnsConfig.cNamespace().add_summary = cwrapper.prototype("enkf_config_node_ref ensemble_config_add_summary( ens_config, char*, int)") EnsConfig.cNamespace().add_gen_kw = cwrapper.prototype("enkf_config_node_ref ensemble_config_add_gen_kw( ens_config, char*)") -EnsConfig.cNamespace().add_gen_data = cwrapper.prototype("enkf_config_node_ref ensemble_config_add_gen_data( ens_config, char*)") EnsConfig.cNamespace().add_field = cwrapper.prototype("enkf_config_node_ref ensemble_config_add_field( ens_config, char*, ecl_grid)") EnsConfig.cNamespace().alloc_keylist_from_var_type = cwrapper.prototype("stringlist_obj ensemble_config_alloc_keylist_from_var_type(ens_config, enkf_var_type_enum)") EnsConfig.cNamespace().alloc_keylist_from_impl_type = cwrapper.prototype("stringlist_obj ensemble_config_alloc_keylist_from_impl_type(ens_config, ert_impl_type_enum)") +EnsConfig.cNamespace().add_node = cwrapper.prototype("void ensemble_config_add_node( ens_config , enkf_config_node )") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/CMakeLists.txt deleted file mode 100644 index dfbd5392ea..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/CMakeLists.txt +++ /dev/null @@ -1,8 +0,0 @@ -set(PYTHON_SOURCES - __init__.py - ensemble_plot_data.py - ensemble_plot_data_vector.py -) - -add_python_package("python.ert.enkf.ensemble_data" ${PYTHON_INSTALL_PREFIX}/ert/enkf/ensemble_data "${PYTHON_SOURCES}" True) - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/__init__.py deleted file mode 100644 index f12c455e2b..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/__init__.py +++ /dev/null @@ -1,2 +0,0 @@ -from .ensemble_plot_data_vector import EnsemblePlotDataVector -from .ensemble_plot_data import EnsemblePlotData \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/CMakeLists.txt index b78946fe4c..a28fb4e9fb 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/CMakeLists.txt @@ -1,14 +1,17 @@ set(PYTHON_SOURCES __init__.py + enkf_field_file_format_enum.py + enkf_fs_type_enum.py enkf_init_modes_enum.py enkf_obs_impl_type_enum.py enkf_run_enum.py enkf_state_type_enum.py + enkf_truncation_type.py enkf_var_type_enum.py ert_impl_type_enum.py load_fail_type_enum.py realization_state_enum.py + gen_data_file_type_enum.py ) add_python_package("python.ert.enkf.enums" ${PYTHON_INSTALL_PREFIX}/ert/enkf/enums "${PYTHON_SOURCES}" True) - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py index f32e8ebca2..381706348d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py @@ -1,3 +1,4 @@ +from .enkf_field_file_format_enum import EnkfFieldFileFormatEnum from .load_fail_type_enum import LoadFailTypeEnum from .enkf_var_type_enum import EnkfVarType from .enkf_state_type_enum import EnkfStateType @@ -6,3 +7,19 @@ from .ert_impl_type_enum import ErtImplType from .enkf_init_modes_enum import EnkfInitModeEnum from .realization_state_enum import RealizationStateEnum +from .enkf_truncation_type import EnkfTruncationType +from .enkf_fs_type_enum import EnKFFSType +from .gen_data_file_type_enum import GenDataFileType + +__all__ = ["EnkfFieldFileFormatEnum", + "LoadFailTypeEnum", + "EnkfVarType", + "EnkfStateType", + "EnkfRunEnum", + "EnkfObservationImplementationType", + "ErtImplType", + "EnkfInitModeEnum", + "RealizationStateEnum", + "EnkfTruncationType", + "EnKFFSType", + "GenDataFileType"] \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_field_file_format_enum.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_field_file_format_enum.py new file mode 100644 index 0000000000..bffb267816 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_field_file_format_enum.py @@ -0,0 +1,39 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'enkf_field_file_format_enum.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCEnum +from ert.enkf import ENKF_LIB + + +class EnkfFieldFileFormatEnum(BaseCEnum): + UNDEFINED_FORMAT = None + RMS_ROFF_FILE = None + ECL_KW_FILE = None + ECL_KW_FILE_ACTIVE_CELLS = None + ECL_KW_FILE_ALL_CELLS = None + ECL_GRDECL_FILE = None + ECL_FILE = None + FILE_FORMAT_NULL = None + +EnkfFieldFileFormatEnum.addEnum("UNDEFINED_FORMAT", 0) +EnkfFieldFileFormatEnum.addEnum("RMS_ROFF_FILE", 1) +EnkfFieldFileFormatEnum.addEnum("ECL_KW_FILE", 2) +EnkfFieldFileFormatEnum.addEnum("ECL_KW_FILE_ACTIVE_CELLS", 3) +EnkfFieldFileFormatEnum.addEnum("ECL_KW_FILE_ALL_CELLS", 4) +EnkfFieldFileFormatEnum.addEnum("ECL_GRDECL_FILE", 5) +EnkfFieldFileFormatEnum.addEnum("ECL_FILE", 6) +EnkfFieldFileFormatEnum.addEnum("FILE_FORMAT_NULL", 7) + +EnkfFieldFileFormatEnum.registerEnum(ENKF_LIB, "enkf_field_file_format_enum") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_fs_type_enum.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_fs_type_enum.py new file mode 100644 index 0000000000..b301fb1afe --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_fs_type_enum.py @@ -0,0 +1,32 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'enkf_fs_type_enum.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCEnum +from ert.enkf import ENKF_LIB + + +class EnKFFSType(BaseCEnum): + INVALID_DRIVER_ID = None + PLAIN_DRIVER_ID = None + BLOCK_FS_DRIVER_ID = None + + +EnKFFSType.addEnum("INVALID_DRIVER_ID", 0) +EnKFFSType.addEnum("PLAIN_DRIVER_ID", 1005) +EnKFFSType.addEnum("BLOCK_FS_DRIVER_ID", 3001) +EnKFFSType.registerEnum(ENKF_LIB, "enkf_fs_type_enum") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_truncation_type.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_truncation_type.py new file mode 100644 index 0000000000..9a4af73221 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_truncation_type.py @@ -0,0 +1,33 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'content_type_enum.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCEnum +from ert.enkf import ENKF_LIB + + +class EnkfTruncationType(BaseCEnum): + TRUNCATE_NONE = None + TRUNCATE_MIN = None + TRUNCATE_MAX = None + +EnkfTruncationType.addEnum("TRUNCATE_NONE", 0) +EnkfTruncationType.addEnum("TRUNCATE_MIN", 1) +EnkfTruncationType.addEnum("TRUNCATE_MAX", 2) + +EnkfTruncationType.registerEnum(ENKF_LIB, "enkf_truncation_type_enum") + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/gen_data_file_type_enum.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/gen_data_file_type_enum.py new file mode 100644 index 0000000000..d484cbc8e4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/gen_data_file_type_enum.py @@ -0,0 +1,38 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'gen_data_file_type_enum.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCEnum +from ert.enkf import ENKF_LIB + + +class GenDataFileType(BaseCEnum): + GEN_DATA_UNDEFINED = None + ASCII = None # The file is ASCII file with a vector of numbers formatted with "%g" + ASCII_TEMPLATE = None # The data is inserted into a user defined template file. + BINARY_DOUBLE = None # The data is in a binary file with doubles. + BINARY_FLOAT = None # The data is in a binary file with floats. + + +GenDataFileType.addEnum("GEN_DATA_UNDEFINED", 0) +GenDataFileType.addEnum("ASCII", 1) +GenDataFileType.addEnum("ASCII_TEMPLATE", 2) +GenDataFileType.addEnum("BINARY_DOUBLE", 3) +GenDataFileType.addEnum("BINARY_FLOAT", 4) +GenDataFileType.registerEnum(ENKF_LIB, "gen_data_file_format_type") + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ert_log.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_log.py new file mode 100644 index 0000000000..a5110b4fae --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_log.py @@ -0,0 +1,17 @@ +from ert.cwrap import CWrapper, CNamespace +from ert.enkf import ENKF_LIB + + +class ErtLog(object): + cnamespace = None + + @staticmethod + def log(log_level, message ): + ErtLog.cnamespace.write_log(log_level, message) + +ErtLog.cnamespace = CNamespace("ErtLog") + +cwrapper = CWrapper(ENKF_LIB) + +ErtLog.cnamespace.init = cwrapper.prototype("void ert_log_init_log(int, char*, char*, bool)") +ErtLog.cnamespace.write_log = cwrapper.prototype("void ert_log_add_message_py(int, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ert_workflow_list.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_workflow_list.py index d159769870..48aeba2c4b 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ert_workflow_list.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_workflow_list.py @@ -1,7 +1,7 @@ -from ert.config import ConfigError from ert.cwrap import BaseCClass, CWrapper from ert.enkf import ENKF_LIB -from ert.util import StringList +from ert.util import StringList, SubstitutionList +from ert.job_queue import Workflow, WorkflowJob class ErtWorkflowList(BaseCClass): @@ -12,37 +12,53 @@ def getWorkflowNames(self): """ @rtype: StringList """ return ErtWorkflowList.cNamespace().alloc_namelist(self) - def runWorkflow(self, workflow_name): - """ @rtype: bool """ - pointer = self.parent().from_param(self.parent()) - return ErtWorkflowList.cNamespace().run_workflow(self, workflow_name, pointer) - def __contains__(self, workflow_name): assert isinstance(workflow_name, str) return ErtWorkflowList.cNamespace().has_workflow(self, workflow_name) - def setVerbose(self, verbose): - ErtWorkflowList.cNamespace().set_verbose(self, verbose) + def __getitem__(self, item): + """ @rtype: Workflow """ + if not item in self: + raise KeyError("Item '%s' is not in the list of available workflows." % item) + + return ErtWorkflowList.cNamespace().get_workflow(self, item).setParent(self) - def getLastError(self): - """ @rtype: ConfigError """ - return ErtWorkflowList.cNamespace().get_last_error(self).setParent(self) + def getContext(self): + """ @rtype: SubstitutionList """ + return ErtWorkflowList.cNamespace().get_context(self) def free(self): ErtWorkflowList.cNamespace().free(self) + def addJob(self, job_name, job_path): + """ + @type job_name: str + @type job_path: str + """ + ErtWorkflowList.cNamespace().add_job(self, job_name, job_path) + + def hasJob(self, job_name): + """ + @type job_name: str + @rtype: bool + """ + return ErtWorkflowList.cNamespace().has_job(self, job_name) + + def getJob(self, job_name): + """ @rtype: WorkflowJob """ + return ErtWorkflowList.cNamespace().get_job(self, job_name) cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("ert_workflow_list", ErtWorkflowList) -cwrapper.registerType("ert_workflow_list_ref", ErtWorkflowList.createCReference) -cwrapper.registerType("ert_workflow_list_obj", ErtWorkflowList.createPythonObject) +cwrapper.registerObjectType("ert_workflow_list", ErtWorkflowList) ErtWorkflowList.cNamespace().free = cwrapper.prototype("void ert_workflow_list_free(ert_workflow_list)") - ErtWorkflowList.cNamespace().alloc_namelist = cwrapper.prototype("stringlist_obj ert_workflow_list_alloc_namelist(ert_workflow_list)") -ErtWorkflowList.cNamespace().run_workflow = cwrapper.prototype("bool ert_workflow_list_run_workflow(ert_workflow_list, char*, c_void_p)") ErtWorkflowList.cNamespace().has_workflow = cwrapper.prototype("bool ert_workflow_list_has_workflow(ert_workflow_list, char*)") -ErtWorkflowList.cNamespace().set_verbose = cwrapper.prototype("void ert_workflow_list_set_verbose(ert_workflow_list, bool)") -ErtWorkflowList.cNamespace().get_last_error = cwrapper.prototype("config_error_ref ert_workflow_list_get_last_error(ert_workflow_list)") \ No newline at end of file +ErtWorkflowList.cNamespace().get_workflow = cwrapper.prototype("workflow_ref ert_workflow_list_get_workflow(ert_workflow_list, char*)") +ErtWorkflowList.cNamespace().get_context = cwrapper.prototype("subst_list_ref ert_workflow_list_get_context(ert_workflow_list)") + +ErtWorkflowList.cNamespace().add_job = cwrapper.prototype("void ert_workflow_list_add_job(ert_workflow_list, char*, char*)") +ErtWorkflowList.cNamespace().has_job = cwrapper.prototype("bool ert_workflow_list_has_job(ert_workflow_list, char*)") +ErtWorkflowList.cNamespace().get_job = cwrapper.prototype("workflow_job_ref ert_workflow_list_get_job(ert_workflow_list, char*)") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py new file mode 100644 index 0000000000..a428071cca --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py @@ -0,0 +1,39 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.ecl import FortIO +from ert.enkf import ENKF_LIB + + + +class GenData(BaseCClass): + + def __init__(self): + c_pointer = GenData.cNamespace().alloc() + super(GenData, self).__init__(c_pointer) + + def __len__(self): + """ @rtype: int """ + return GenData.cNamespace().size(self) + + def free(self): + GenData.cNamespace().free(self) + + def export(self, file_name, file_format_type, fortio): + """ + @type: str + @type: GenDataFileType + @type: FortIO + """ + GenData.cNamespace().export(self, file_name, file_format_type, fortio) + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("gen_data", GenData) + +GenData.cNamespace().alloc = cwrapper.prototype("c_void_p gen_data_alloc()") +GenData.cNamespace().free = cwrapper.prototype("void gen_data_free(gen_data)") +GenData.cNamespace().size = cwrapper.prototype("int gen_data_get_size(gen_data)") + +GenData.cNamespace().export = cwrapper.prototype("void gen_data_export(gen_data , char*, gen_data_file_format_type, fortio)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata.py b/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata.py new file mode 100644 index 0000000000..2c85ac31aa --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata.py @@ -0,0 +1,68 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB, LocalObsdataNode + + +class LocalObsdata(BaseCClass): + + def __init__(self, name): + assert isinstance(name, str) + + c_pointer = LocalObsdata.cNamespace().alloc(name) + super(LocalObsdata, self).__init__(c_pointer) + + def __len__(self): + """ @rtype: int """ + return LocalObsdata.cNamespace().size(self) + + + def __getitem__(self, index): + """ @rtype: LocalObsdataNode """ + assert isinstance(index, int) + return LocalObsdata.cNamespace().get_node(self, index).setParent(self) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def addNode(self, node): + """ @rtype: bool """ + assert isinstance(node, LocalObsdataNode) + node.convertToCReference(self) + already_exists_node_for_key = LocalObsdata.cNamespace().add_node(self, node) + return already_exists_node_for_key + + def __contains__(self, item): + """ @rtype: bool """ + if isinstance(item, str): + return LocalObsdata.cNamespace().has_node(self, item) + elif isinstance(item, LocalObsdataNode): + return LocalObsdata.cNamespace().has_node(self, item.getKey()) + + return False + + def getName(self): + """ @rtype: str """ + return LocalObsdata.cNamespace().name(self) + + def free(self): + LocalObsdata.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("local_obsdata", LocalObsdata) +cwrapper.registerType("local_obsdata_obj", LocalObsdata.createPythonObject) +cwrapper.registerType("local_obsdata_ref", LocalObsdata.createCReference) + +LocalObsdata.cNamespace().alloc = cwrapper.prototype("c_void_p local_obsdata_alloc(char*)") +LocalObsdata.cNamespace().free = cwrapper.prototype("void local_obsdata_free(local_obsdata)") +LocalObsdata.cNamespace().size = cwrapper.prototype("int local_obsdata_get_size(local_obsdata)") +LocalObsdata.cNamespace().has_node = cwrapper.prototype("bool local_obsdata_has_node(local_obsdata, char*)") +LocalObsdata.cNamespace().add_node = cwrapper.prototype("bool local_obsdata_add_node(local_obsdata, local_obsdata_node)") +LocalObsdata.cNamespace().get_node = cwrapper.prototype("local_obsdata_node_ref local_obsdata_iget(local_obsdata, int)") +LocalObsdata.cNamespace().name = cwrapper.prototype("char* local_obsdata_get_name(local_obsdata)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata_node.py b/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata_node.py new file mode 100644 index 0000000000..28a46c0495 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/local_obsdata_node.py @@ -0,0 +1,36 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB + +class LocalObsdataNode(BaseCClass): + + def __init__(self, obs_key): + assert isinstance(obs_key, str) + + c_pointer = LocalObsdataNode.cNamespace().alloc(obs_key) + super(LocalObsdataNode, self).__init__(c_pointer) + + def getKey(self): + return LocalObsdataNode.cNamespace().get_key(self) + + def addRange(self, step_1, step_2): + assert isinstance(step_1, int) + assert isinstance(step_2, int) + LocalObsdataNode.cNamespace().add_range(self, step_1, step_2) + + def free(self): + LocalObsdataNode.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("local_obsdata_node", LocalObsdataNode) +cwrapper.registerType("local_obsdata_node_obj", LocalObsdataNode.createPythonObject) +cwrapper.registerType("local_obsdata_node_ref", LocalObsdataNode.createCReference) + +LocalObsdataNode.cNamespace().alloc = cwrapper.prototype("c_void_p local_obsdata_node_alloc(char*)") +LocalObsdataNode.cNamespace().free = cwrapper.prototype("void local_obsdata_node_free(local_obsdata_node)") +LocalObsdataNode.cNamespace().get_key = cwrapper.prototype("char* local_obsdata_node_get_key(local_obsdata_node)") +LocalObsdataNode.cNamespace().add_range = cwrapper.prototype("void local_obsdata_node_add_range(local_obsdata_node, int, int)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/meas_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/meas_data.py new file mode 100644 index 0000000000..5ff0e4312d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/meas_data.py @@ -0,0 +1,42 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.enkf.obs_data import ObsData +from ert.util import Matrix, IntVector + + +class MeasData(BaseCClass): + + def __init__(self, active_list): + assert isinstance(active_list, IntVector) + c_pointer = MeasData.cNamespace().alloc(active_list) + super(MeasData, self).__init__(c_pointer) + + + def createS(self, size): + """ @rtype: Matrix """ + assert isinstance(size, int) + return MeasData.cNamespace().allocS(self, size) + + def deactivateZeroStdSamples(self, obs_data): + assert isinstance(obs_data, ObsData) + self.cNamespace().deactivate_outliers(obs_data, self) + + + def free(self): + MeasData.cNamespace().free(self) + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("meas_data", MeasData) +cwrapper.registerType("meas_data_obj", MeasData.createPythonObject) +cwrapper.registerType("meas_data_ref", MeasData.createCReference) + +MeasData.cNamespace().alloc = cwrapper.prototype("c_void_p meas_data_alloc(int_vector)") +MeasData.cNamespace().free = cwrapper.prototype("void meas_data_free(meas_data)") + +MeasData.cNamespace().allocS = cwrapper.prototype("matrix_obj meas_data_allocS(meas_data, int)") + +MeasData.cNamespace().deactivate_outliers = cwrapper.prototype("void enkf_analysis_deactivate_std_zero(obs_data, meas_data)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/model_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/model_config.py index cd745c8ff1..0318c39f6a 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/model_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/model_config.py @@ -58,7 +58,7 @@ def get_max_internal_submit(self): def set_max_internal_submit(self, max_value): ModelConfig.cNamespace().get_max_internal_submit(self, max_value) - def get_forward_model(self): + def getForwardModel(self): """ @rtype: ForwardModel """ return ModelConfig.cNamespace().get_forward_model(self).setParent(self) @@ -80,6 +80,9 @@ def setRunpath(self, path_format): def free(self): ModelConfig.cNamespace().free(self) + def getFSType(self): + return ModelConfig.cNamespace().get_fs_type( self ) + ################################################################## cwrapper = CWrapper(ENKF_LIB) @@ -98,6 +101,7 @@ def free(self): ModelConfig.cNamespace().get_runpath_as_char = cwrapper.prototype("char* model_config_get_runpath_as_char(model_config)") ModelConfig.cNamespace().select_runpath = cwrapper.prototype("bool model_config_select_runpath(model_config, char*)") ModelConfig.cNamespace().set_runpath = cwrapper.prototype("void model_config_set_runpath(model_config, char*)") +ModelConfig.cNamespace().get_fs_type = cwrapper.prototype("enkf_fs_type_enum model_config_get_dbase_type(model_config)") ModelConfig.cNamespace().get_history = cwrapper.prototype("history_ref model_config_get_history(model_config)") ModelConfig.cNamespace().get_history_source = cwrapper.prototype("history_source_enum model_config_get_history_source(model_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/node_id.py b/ThirdParty/Ert/devel/python/python/ert/enkf/node_id.py new file mode 100644 index 0000000000..43a3704e31 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/node_id.py @@ -0,0 +1,23 @@ +from ctypes import Structure, c_int +from ert.cwrap import CWrapper +from ert.enkf.enums import EnkfStateType + +class NodeId(Structure): + """ + NodeId is specified in enkf_types.h + """ + _fields_ = [("report_step", c_int), + ("iens", c_int), + ("state", c_int)] + + def __init__(self, report_step, realization_number, state): + """ + @type report_step: int + @type realization_number: int + @type state: EnkfStateType + """ + super(NodeId, self).__init__(report_step, realization_number, state) + + +CWrapper.registerType("node_id", NodeId) + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/obs_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/obs_data.py new file mode 100644 index 0000000000..5884e6aa68 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/obs_data.py @@ -0,0 +1,48 @@ +from types import NoneType +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.util import Matrix + + +class ObsData(BaseCClass): + + def __init__(self): + c_pointer = ObsData.cNamespace().alloc() + super(ObsData, self).__init__(c_pointer) + + def __len__(self): + """ @rtype: int """ + return ObsData.cNamespace().active_size(self) + + def createDobs(self, size): + """ @rtype: Matrix """ + assert isinstance(size, int) + return ObsData.cNamespace().allocdObs(self, size) + + def scale(self, S, E=None, D=None, R=None, D_obs=None): + assert isinstance(S, Matrix) + assert isinstance(E, (Matrix, NoneType)) + assert isinstance(D, (Matrix, NoneType)) + assert isinstance(R, (Matrix, NoneType)) + assert isinstance(D_obs, (Matrix, NoneType)) + ObsData.cNamespace().scale(self, S, E, D, R, D_obs) + + def free(self): + ObsData.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("obs_data", ObsData) +cwrapper.registerType("obs_data_obj", ObsData.createPythonObject) +cwrapper.registerType("obs_data_ref", ObsData.createCReference) + +ObsData.cNamespace().alloc = cwrapper.prototype("c_void_p obs_data_alloc()") +ObsData.cNamespace().free = cwrapper.prototype("void obs_data_free(obs_data)") +ObsData.cNamespace().active_size = cwrapper.prototype("int obs_data_get_active_size(obs_data)") + +ObsData.cNamespace().allocdObs = cwrapper.prototype("matrix_obj obs_data_allocdObs(obs_data, int)") +ObsData.cNamespace().scale = cwrapper.prototype("void obs_data_scale(obs_data, matrix, matrix, matrix, matrix, matrix)") + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/CMakeLists.txt index 030df05295..f11169271f 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/CMakeLists.txt @@ -1,5 +1,7 @@ set(PYTHON_SOURCES __init__.py + block_observation.py + gen_observation.py obs_vector.py summary_observation.py ) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/__init__.py index 045ac7f225..063f1f88c0 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/__init__.py @@ -1,2 +1,4 @@ from .summary_observation import SummaryObservation -from .obs_vector import ObsVector \ No newline at end of file +from .block_observation import BlockObservation +from .gen_observation import GenObservation +from .obs_vector import ObsVector diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/block_observation.py b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/block_observation.py new file mode 100644 index 0000000000..77fdfb114a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/block_observation.py @@ -0,0 +1,82 @@ +# Copyright (C) 2012 Statoil ASA, Norway. +# +# The file 'block_obs.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB, NodeId + + +class BlockObservation(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def getCoordinate(self, index): + """ @rtype: tuple of (int, int, int) """ + i = BlockObservation.cNamespace().iget_i(self, index) + j = BlockObservation.cNamespace().iget_j(self, index) + k = BlockObservation.cNamespace().iget_k(self, index) + return i, j, k + + def __len__(self): + """ @rtype: int """ + return BlockObservation.cNamespace().get_size(self) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield cur + cur += 1 + + def getValue(self, index): + """ @rtype: float """ + return BlockObservation.cNamespace().get_value(self, index) + + def getStd(self, index): + """ @rtype: float """ + return BlockObservation.cNamespace().get_std(self, index) + + def getDepth(self, index): + """ @rtype: float """ + return BlockObservation.cNamespace().get_depth(self, index) + + def getData(self, state, obs_index, node_id): + """ + @type state: c_void_p + @type obs_index: int + @type node_id: NodeId + @rtype: float """ + + return BlockObservation.cNamespace().iget_data(self, state, obs_index, node_id) + + + def free(self): + BlockObservation.cNamespace().free(self) + +################################################################## + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("block_obs", BlockObservation) + +BlockObservation.cNamespace().free = cwrapper.prototype("void block_obs_free( block_obs )") +BlockObservation.cNamespace().iget_i = cwrapper.prototype("int block_obs_iget_i(block_obs, int)") +BlockObservation.cNamespace().iget_j = cwrapper.prototype("int block_obs_iget_j( block_obs, int)") +BlockObservation.cNamespace().iget_k = cwrapper.prototype("int block_obs_iget_k( block_obs , int)") +BlockObservation.cNamespace().get_size = cwrapper.prototype("int block_obs_get_size( block_obs )") +BlockObservation.cNamespace().get_std = cwrapper.prototype("double block_obs_iget_std( block_obs, int )") +BlockObservation.cNamespace().get_value = cwrapper.prototype("double block_obs_iget_value( block_obs, int)") +BlockObservation.cNamespace().get_depth = cwrapper.prototype("double block_obs_iget_depth( block_obs, int)") + +BlockObservation.cNamespace().iget_data = cwrapper.prototype("double block_obs_iget_data(block_obs, c_void_p, int, node_id)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/gen_observation.py b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/gen_observation.py new file mode 100644 index 0000000000..ec861862ce --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/gen_observation.py @@ -0,0 +1,56 @@ +# Copyright (C) 2012 Statoil ASA, Norway. +# +# The file 'gen_observation.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB + + +class GenObservation(BaseCClass): + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def getValue(self, index): + """ @rtype: float """ + return GenObservation.cNamespace().get_data(self, index) + + def getStandardDeviation(self, index): + """ @rtype: float """ + return GenObservation.cNamespace().get_std(self, index) + + def getSize(self): + """ @rtype: float """ + return GenObservation.cNamespace().get_size(self) + + def getIndex(self, index): + """ @rtype: int """ + return GenObservation.cNamespace().get_index(self, index) + + + + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("gen_obs", GenObservation) +cwrapper.registerType("gen_obs_obj", GenObservation.createPythonObject) +cwrapper.registerType("gen_obs_ref", GenObservation.createCReference) + +GenObservation.cNamespace().get_value = cwrapper.prototype("double summary_obs_get_value(summary_obs)") +GenObservation.cNamespace().get_std = cwrapper.prototype("double gen_obs_iget_std(gen_obs, int)") +GenObservation.cNamespace().get_data = cwrapper.prototype("double gen_obs_iget_data(gen_obs, int)") +GenObservation.cNamespace().get_size = cwrapper.prototype("int gen_obs_get_size(gen_obs)") +GenObservation.cNamespace().get_index = cwrapper.prototype("int gen_obs_get_obs_index(gen_obs, int)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/obs_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/obs_vector.py index 0ce4598fd9..9c04c3bbeb 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/observations/obs_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/observations/obs_vector.py @@ -17,8 +17,7 @@ from ert.enkf import ENKF_LIB from ert.enkf.data import EnkfConfigNode from ert.enkf.enums import EnkfObservationImplementationType -from ert.enkf.observations.summary_observation import SummaryObservation - +from ert.enkf.observations import BlockObservation, SummaryObservation, GenObservation class ObsVector(BaseCClass): @@ -36,16 +35,23 @@ def __init__(self, observation_type, observation_key, config_node, num_reports): pointer = ObsVector.cNamespace().alloc(observation_type, observation_key, config_node, num_reports) super(ObsVector, self).__init__(pointer) - def get_state_kw(self): + + def getDataKey(self): """ @rtype: str """ return ObsVector.cNamespace().get_state_kw(self) def getNode(self, index): + """ @rtype: SummaryObservation or BlockObservation or GenObservation""" + pointer = ObsVector.cNamespace().iget_node(self, index) node_type = self.getImplementationType() if node_type == EnkfObservationImplementationType.SUMMARY_OBS: return SummaryObservation.createCReference(pointer, self) + elif node_type == EnkfObservationImplementationType.BLOCK_OBS: + return BlockObservation.createCReference(pointer, self) + elif node_type == EnkfObservationImplementationType.GEN_OBS: + return GenObservation.createCReference(pointer, self) else: raise AssertionError("Node type '%s' currently not supported!" % node_type) @@ -57,6 +63,10 @@ def isActive(self, index): """ @rtype: bool """ return ObsVector.cNamespace().iget_active(self, index) + def getNextActiveStep(self, previous_step=-1): + """ @rtype: int """ + return ObsVector.cNamespace().get_next_active_step(self, previous_step) + def getImplementationType(self): """ @rtype: EnkfObservationImplementationType """ return ObsVector.cNamespace().get_impl_type(self) @@ -66,14 +76,32 @@ def installNode(self, index, node): node.convertToCReference(self) ObsVector.cNamespace().install_node(self, index, node.from_param(node)) + def getConfigNode(self): + """ @rtype: EnkfConfigNode """ + return ObsVector.cNamespace().get_config_node(self).setParent(self) + + def __iter__(self): + """ Iterate over active report steps. """ + cur = -1 + run = True + while run: + report_step = self.getNextActiveStep(cur) + if report_step >= 0: + cur = report_step + yield cur + else: + run = False + + def hasData(self, active_mask, fs): + """ @rtype: bool """ + return ObsVector.cNamespace().has_data(self, active_mask, fs) + def free(self): ObsVector.cNamespace().free(self) cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("obs_vector", ObsVector) -cwrapper.registerType("obs_vector_obj", ObsVector.createPythonObject) -cwrapper.registerType("obs_vector_ref", ObsVector.createCReference) +cwrapper.registerObjectType("obs_vector", ObsVector) ObsVector.cNamespace().alloc = cwrapper.prototype("c_void_p obs_vector_alloc(enkf_obs_impl_type, char*, enkf_config_node, int)") ObsVector.cNamespace().free = cwrapper.prototype("void obs_vector_free( obs_vector )") @@ -83,3 +111,6 @@ def free(self): ObsVector.cNamespace().iget_active = cwrapper.prototype("bool obs_vector_iget_active( obs_vector, int)") ObsVector.cNamespace().get_impl_type = cwrapper.prototype("enkf_obs_impl_type obs_vector_get_impl_type( obs_vector)") ObsVector.cNamespace().install_node = cwrapper.prototype("void obs_vector_install_node(obs_vector, int, c_void_p)") +ObsVector.cNamespace().get_next_active_step = cwrapper.prototype("int obs_vector_get_next_active_step(obs_vector, int)") +ObsVector.cNamespace().has_data = cwrapper.prototype("bool obs_vector_has_data(obs_vector , bool_vector , enkf_fs)") +ObsVector.cNamespace().get_config_node = cwrapper.prototype("enkf_config_node_ref obs_vector_get_config_node(obs_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/CMakeLists.txt index dcbb2524ec..4ce39c00f6 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/CMakeLists.txt @@ -1,12 +1,16 @@ set(PYTHON_SOURCES __init__.py + block_observation_data_fetcher.py data_fetcher.py + ensemble_block_data_fetcher.py ensemble_data_fetcher.py + ensemble_gen_data_fetcher.py + ensemble_gen_kw_fetcher.py observation_data_fetcher.py - plot_data_fetcher.py + observation_gen_data_fetcher.py + pca_fetcher.py refcase_data_fetcher.py ) add_python_package("python.ert.enkf.plot" ${PYTHON_INSTALL_PREFIX}/ert/enkf/plot "${PYTHON_SOURCES}" True) -add_subdirectory(data) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/__init__.py index f83558a257..75ecfa73b1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/__init__.py @@ -1,6 +1,10 @@ -from .data import DictProperty, Sample, SimpleSample, SampleStatistics, SampleList, SampleListCollection, PlotData - from .data_fetcher import DataFetcher from .observation_data_fetcher import ObservationDataFetcher from .refcase_data_fetcher import RefcaseDataFetcher -from .plot_data_fetcher import PlotDataFetcher \ No newline at end of file +from .ensemble_data_fetcher import EnsembleDataFetcher +from .ensemble_block_data_fetcher import EnsembleBlockDataFetcher +from .block_observation_data_fetcher import BlockObservationDataFetcher +from .ensemble_gen_kw_fetcher import EnsembleGenKWFetcher +from .ensemble_gen_data_fetcher import EnsembleGenDataFetcher +from .observation_gen_data_fetcher import ObservationGenDataFetcher +from .pca_fetcher import PcaDataFetcher \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/block_observation_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/block_observation_data_fetcher.py new file mode 100644 index 0000000000..a5ea24e4ee --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/block_observation_data_fetcher.py @@ -0,0 +1,107 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'block_observation_data_fetcher.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.enkf import EnkfObservationImplementationType +from ert.enkf.observations import BlockObservation +from ert.enkf.plot import DataFetcher + + +class BlockObservationDataFetcher(DataFetcher): + def __init__(self, ert): + super(BlockObservationDataFetcher, self).__init__(ert) + self.__selected_report_step_index = None + + def setSelectedReportStepIndex(self, index): + self.__selected_report_step_index = index + + def fetchSupportedKeys(self): + observations = self.ert().getObservations() + string_list = observations.getTypedKeylist(EnkfObservationImplementationType.BLOCK_OBS) + return [key for key in string_list] + + def __fetchObservationData(self, block_observation): + assert isinstance(block_observation, BlockObservation) + + data = { + "continuous": False, + "x": [], + "y": [], + "std": [], + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None + } + + for index in block_observation: + std = block_observation.getStd(index) + y = block_observation.getDepth(index) + x = block_observation.getValue(index) + + data["std"].append(std) + data["y"].append(y) + data["x"].append(x) + + adjusted_x = self.adjustX(x, std) + + if data["min_x"] is None or data["min_x"] > adjusted_x: + data["min_x"] = adjusted_x + + if data["max_x"] is None or data["max_x"] < x + std: + data["max_x"] = x + std + + + if data["min_y"] is None or data["min_y"] > y: + data["min_y"] = y + + if data["max_y"] is None or data["max_y"] < y: + data["max_y"] = y + + return data + + @staticmethod + def adjustX(x, std): + if x >= 0: + return max(0, x - std) + + return x - std + + def hasData(self, key): + """ @rtype: bool """ + observations = self.ert().getObservations() + if not observations.hasKey(key): + return False + + return observations[key].getActiveCount() > 0 + + def fetchData(self, key, case=None): + observations = self.ert().getObservations() + assert observations.hasKey(key) + + observation_vector = observations[key] + + report_step_data = [] + for report_step in observation_vector: + block_observation = observation_vector.getNode(report_step) + data = self.__fetchObservationData(block_observation) + data["report_step"] = report_step + report_step_data.append(data) + + + if self.__selected_report_step_index is not None: + return report_step_data[self.__selected_report_step_index] + else: + return report_step_data + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/CMakeLists.txt deleted file mode 100644 index 369045ee78..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/CMakeLists.txt +++ /dev/null @@ -1,12 +0,0 @@ -set(PYTHON_SOURCES - __init__.py - dict_property.py - plot_data.py - sample.py - sample_list.py - sample_list_collection.py - sample_statistics.py -) - -add_python_package("python.ert.enkf.plot.data" ${PYTHON_INSTALL_PREFIX}/ert/enkf/plot/data "${PYTHON_SOURCES}" True) - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/__init__.py deleted file mode 100644 index 4a331c352d..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/__init__.py +++ /dev/null @@ -1,8 +0,0 @@ -from .dict_property import DictProperty - -from .sample import SimpleSample, Sample -from .sample_statistics import SampleStatistics -from .sample_list import SampleList -from .sample_list_collection import SampleListCollection - -from .plot_data import PlotData \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/dict_property.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/dict_property.py deleted file mode 100644 index b44a03213e..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/dict_property.py +++ /dev/null @@ -1,16 +0,0 @@ -class DictProperty(object): - def __init__(self, name): - super(DictProperty, self).__init__() - self.__property_name = name - - def __set__(self, instance, value): - instance[self.__property_name] = value - - def __get__(self, instance, owner): - if not self.__property_name in instance: - raise AttributeError("The dictionary property: '%s' has not been initialized!" % self.__property_name) - - if not owner.__dict__.has_key(self.__property_name): - raise AttributeError("The dictionary property: '%s' does not have an associated attribute!" % self.__property_name) - - return instance[self.__property_name] \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/plot_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/plot_data.py deleted file mode 100644 index 2cfc2d0ebc..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/plot_data.py +++ /dev/null @@ -1,147 +0,0 @@ -from ert.enkf.plot.data import DictProperty, SampleList - - -class PlotData(dict): - observations = DictProperty("observations") - refcase = DictProperty("refcase") - ensemble = DictProperty("ensemble") - ensemble_names = DictProperty("ensemble_names") - ensemble_statistics = DictProperty("ensemble_statistics") - name = DictProperty("name") - - min_x = DictProperty("min_x") - max_x = DictProperty("max_x") - min_y = DictProperty("min_y") - max_y = DictProperty("max_y") - - def __init__(self): - super(PlotData, self).__init__() - - self.observations = None - self.refcase = None - self.ensemble = None - self.ensemble_names = [] - self.ensemble_statistics = [] - self.name = None - - self.min_x = None - self.max_x = None - self.min_y = None - self.max_y = None - - - def setRefcase(self, refcase): - assert isinstance(refcase, SampleList) - - self.refcase = refcase - - if self.min_x is None: - self.min_x = refcase.min_x - else: - self.min_x = min(self.min_x, refcase.min_x) - - if self.max_x is None: - self.max_x = refcase.max_x - else: - self.max_x = max(self.max_x, refcase.max_x) - - if self.min_y is None: - self.min_y = refcase.statistics.min_y - else: - self.min_y = min(self.min_y, refcase.statistics.min_y) - - if self.max_y is None: - self.max_y = refcase.statistics.max_y - else: - self.max_y = max(self.max_y, refcase.statistics.max_y) - - - def setObservations(self, observations): - assert isinstance(observations, SampleList) - - self.observations = observations - - if self.min_x is None: - self.min_x = observations.min_x - else: - self.min_x = min(self.min_x, observations.min_x) - - if self.max_x is None: - self.max_x = observations.max_x - else: - self.max_x = max(self.max_x, observations.max_x) - - if self.min_y is None: - self.min_y = self.adjustMinValue(observations.statistics.min_y, observations.statistics.min_y_with_std) - else: - mv = self.adjustMinValue(observations.statistics.min_y, observations.statistics.min_y_with_std) - self.min_y = min(self.min_y, mv) - - if self.max_y is None: - self.max_y = observations.statistics.max_y_with_std - else: - self.max_y = max(self.max_y, observations.statistics.max_y_with_std) - - - def adjustMinValue(self, value, value_with_std): - if value >= 0: - return max(0, value_with_std) - - return value_with_std - - - - # def setEnsemble(self, ensemble): - # self.ensemble = ensemble - # - # for realization in ensemble: - # if self.min_x is None: - # self.min_x = realization.min_x - # else: - # self.min_x = min(self.min_x, realization.min_x) - # - # if self.max_x is None: - # self.max_x = realization.max_x - # else: - # self.max_x = max(self.max_x, realization.max_x) - # - # if self.min_y is None: - # self.min_y = realization.statistics.min_y - # else: - # self.min_y = min(self.min_y, realization.statistics.min_y) - # - # if self.max_y is None: - # self.max_y = realization.statistics.max_y - # else: - # self.max_y = max(self.max_y, realization.statistics.max_y) - - def addEnsemble(self, case, ensemble, ensemble_statistics): - if self.ensemble is None: - self.ensemble = [] - - self.ensemble.append(ensemble) - self.ensemble_names.append(case) - self.ensemble_statistics.append(ensemble_statistics) - - for realization in ensemble: - if self.min_x is None: - self.min_x = realization.min_x - else: - self.min_x = min(self.min_x, realization.min_x) - - if self.max_x is None: - self.max_x = realization.max_x - else: - self.max_x = max(self.max_x, realization.max_x) - - if self.min_y is None: - self.min_y = realization.statistics.min_y - else: - self.min_y = min(self.min_y, realization.statistics.min_y) - - if self.max_y is None: - self.max_y = realization.statistics.max_y - else: - self.max_y = max(self.max_y, realization.statistics.max_y) - - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample.py deleted file mode 100644 index 2abe68bd4b..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample.py +++ /dev/null @@ -1,36 +0,0 @@ -from ert.enkf.plot.data import DictProperty - - -class SimpleSample(dict): - x = DictProperty("x") - y = DictProperty("y") - - def __init__(self): - super(SimpleSample, self).__init__() - - self.x = 0.0 - self.y = 0.0 - - -class Sample(dict): - index = DictProperty("index") - x = DictProperty("x") - y = DictProperty("y") - std = DictProperty("std") - - group = DictProperty("group") - name = DictProperty("name") - single_point = DictProperty("single_point") - - def __init__(self): - super(Sample, self).__init__() - - self.index = None - self.x = 0.0 - self.y = 0.0 - self.std = 0.0 - - self.group = None - self.name = None - - self.single_point = False \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list.py deleted file mode 100644 index bd0c0f2416..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list.py +++ /dev/null @@ -1,31 +0,0 @@ -from ert.enkf.plot.data import DictProperty, Sample, SimpleSample, SampleStatistics - - -class SampleList(dict): - min_x = DictProperty("min_x") - max_x = DictProperty("max_x") - group = DictProperty("group") - samples = DictProperty("samples") - statistics = DictProperty("statistics") - continuous_line = DictProperty("continuous_line") - - - def __init__(self): - super(SampleList, self).__init__() - - self.min_x = None - self.max_x = None - self.group = None - self.samples = [] - self.statistics = SampleStatistics() - self.continuous_line = True - - def addSample(self, sample): - assert isinstance(sample, Sample) or isinstance(sample, SimpleSample) - - self.samples.append(sample) - self.statistics.addSample(sample) - - if isinstance(sample, Sample): - if sample.single_point: - self.continuous_line = False \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list_collection.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list_collection.py deleted file mode 100644 index 71266ca7d6..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_list_collection.py +++ /dev/null @@ -1,26 +0,0 @@ -from ert.enkf.plot.data import DictProperty, SampleList - - -class SampleListCollection(dict): - # sample_lists = DictProperty("sample_lists") - sample_lists_keys = DictProperty("sample_lists_keys") - - def __init__(self): - super(SampleListCollection, self).__init__() - - # self.sample_lists = [] - self.sample_lists_keys = [] - - def addSampleList(self, sample_list): - assert isinstance(sample_list, SampleList) - - if sample_list.group in self: - raise ValueError("Already exists a list for group with name: %s" % sample_list.group) - - # self.sample_lists.append(sample_list) - - self.sample_lists_keys.append(sample_list.group) - self.sample_lists_keys.sort() - self[sample_list.group] = sample_list - - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_statistics.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_statistics.py deleted file mode 100644 index eceb27085a..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data/sample_statistics.py +++ /dev/null @@ -1,68 +0,0 @@ -from ert.enkf.plot.data import DictProperty, Sample, SimpleSample - - -class SampleStatistics(dict): - min_x = DictProperty("min_x") - max_x = DictProperty("max_x") - - min_y = DictProperty("min_y") - max_y = DictProperty("max_y") - - min_y_with_std = DictProperty("min_y_with_std") - max_y_with_std = DictProperty("max_y_with_std") - - def __init__(self): - super(SampleStatistics, self).__init__() - - self.min_x = None - self.max_x = None - - self.min_y = None - self.max_y = None - - self.min_y_with_std = None - self.max_y_with_std = None - - - def addSample(self, sample): - assert isinstance(sample, Sample) or isinstance(sample, SimpleSample) - - if self.min_x is None: - self.min_x = sample.x - - if self.max_x is None: - self.max_x = sample.x - - if self.min_y is None: - self.min_y = sample.y - - if self.max_y is None: - self.max_y = sample.y - - - if isinstance(sample, Sample): - if self.min_y_with_std is None: - self.min_y_with_std = sample.y - sample.std - - if self.max_y_with_std is None: - self.max_y_with_std = sample.y + sample.std - - self.min_y_with_std = min(self.min_y_with_std, sample.y - sample.std) - self.max_y_with_std = max(self.max_y_with_std, sample.y + sample.std) - else: - if self.min_y_with_std is None: - self.min_y_with_std = sample.y - - if self.max_y_with_std is None: - self.max_y_with_std = sample.y - - self.min_y_with_std = min(self.min_y_with_std, sample.y) - self.max_y_with_std = max(self.max_y_with_std, sample.y) - - - self.min_x = min(self.min_x, sample.x) - self.max_x = max(self.max_x, sample.x) - - self.min_y = min(self.min_y, sample.y) - self.max_y = max(self.max_y, sample.y) - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data_fetcher.py index 7ded8dad02..b67769f2dc 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data_fetcher.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/data_fetcher.py @@ -6,14 +6,25 @@ def __init__(self, ert): super(DataFetcher, self).__init__() assert isinstance(ert, EnKFMain) self.__ert = ert + self.__supported_keys = None - - def fetchData(self): + def fetchData(self, key, case=None): raise NotImplementedError() def ert(self): return self.__ert + def fetchSupportedKeys(self): + raise NotImplementedError() + + def getSupportedKeys(self): + if self.__supported_keys is None: + self.__supported_keys = self.fetchSupportedKeys() + return self.__supported_keys + + def supportsKey(self, key): + return key in self.getSupportedKeys() + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_block_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_block_data_fetcher.py new file mode 100644 index 0000000000..6b9e763088 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_block_data_fetcher.py @@ -0,0 +1,109 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'ensemble_block_data_fetcher.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.enkf.enums import ErtImplType +from ert.enkf.plot import DataFetcher +from ert.enkf.plot_data import PlotBlockDataLoader, PlotBlockData + + +class EnsembleBlockDataFetcher(DataFetcher): + def __init__(self, ert): + super(EnsembleBlockDataFetcher, self).__init__(ert) + self.__selected_report_step_index = None + + def __fetchSimulationData(self, block_data): + """ + @type block_data: PlotBlockData + @rtype dict + """ + data = { + "x": [], + "y": [], + "min_x_values": [], + "max_x_values": [], + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None + } + + depth_vector = block_data.getDepth() + + for depth in depth_vector: + data["y"].append(depth) + data["min_x_values"].append(None) + data["max_x_values"].append(None) + + + min_y = min(data["y"]) + max_y = max(data["y"]) + + if data["min_y"] is None or data["min_y"] > min_y: + data["min_y"] = min_y + + if data["max_y"] is None or data["max_y"] < max_y: + data["max_y"] = max_y + + for block_vector in block_data: + x = [] + data["x"].append(x) + + for index in range(len(block_vector)): + value = block_vector[index] + x.append(value) + if data["min_x"] is None or data["min_x"] > value: + data["min_x"] = value + + if data["max_x"] is None or data["max_x"] < value: + data["max_x"] = value + + if data["min_x_values"][index] is None or data["min_x_values"][index] > value: + data["min_x_values"][index] = value + + if data["max_x_values"][index] is None or data["max_x_values"][index] < value: + data["max_x_values"][index] = value + + return data + + def fetchData(self, key, case=None): + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(case) + observations = self.ert().getObservations() + assert observations.hasKey(key) + + observation_vector = observations[key] + + loader = PlotBlockDataLoader(observation_vector) + + report_step_data = [] + for report_step in observation_vector: + block_data = loader.load(enkf_fs, report_step) + data = self.__fetchSimulationData(block_data) + data["report_step"] = report_step + + report_step_data.append(data) + + if self.__selected_report_step_index is not None: + return report_step_data[self.__selected_report_step_index] + else: + return report_step_data + + def fetchSupportedKeys(self): + string_list = self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.SUMMARY) + return [key for key in string_list] + + def setSelectedReportStepIndex(self, index): + self.__selected_report_step_index = index + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_data_fetcher.py index 142f53637a..f033dd5fdd 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_data_fetcher.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_data_fetcher.py @@ -1,24 +1,16 @@ from ert.enkf import EnsConfig -from ert.enkf.ensemble_data import EnsemblePlotData, EnsemblePlotDataVector +from ert.enkf.plot_data import EnsemblePlotData from ert.enkf.enums import ErtImplType -from ert.enkf.plot import SimpleSample, SampleListCollection, SampleList -from ert.enkf.plot.data.sample_statistics import SampleStatistics from ert.enkf.plot.data_fetcher import DataFetcher class EnsembleDataFetcher(DataFetcher): def __init__(self, ert): super(EnsembleDataFetcher, self).__init__(ert) - self.report_times = {} - - def fetchData(self): - """ @rtype: SampleListCollection """ - return self.getEnsembleData() - - def getSummaryKeys(self): - """ @rtype: StringList """ - return self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.SUMMARY) + def fetchSupportedKeys(self): + """ @rtype: list of str """ + return [key for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.SUMMARY)] def getEnsembleConfigNode(self, key): @@ -27,79 +19,55 @@ def getEnsembleConfigNode(self, key): assert ensemble_config.hasKey(key) return ensemble_config.getNode(key) - def getRealizationData(self, key, ensemble_plot_data_vector): - """ @rtype: SampleList """ - assert isinstance(ensemble_plot_data_vector, EnsemblePlotDataVector) - - samples = SampleList() - samples.group = key - active_count = 0 - for index in range(len(ensemble_plot_data_vector)): - if ensemble_plot_data_vector.isActive(index): - sample = SimpleSample() - sample.y = ensemble_plot_data_vector.getValue(index) - sample.x = ensemble_plot_data_vector.getTime(index).ctime() - - samples.addSample(sample) - active_count += 1 - - samples.min_x = samples.statistics.min_x - samples.max_x = samples.statistics.max_x - return samples - - - - def getEnsembleDataForKey(self, key): - """ @rtype: list of SampleList """ + def fetchData(self, key, case=None): ensemble_config_node = self.getEnsembleConfigNode(key) - enkf_fs = self.ert().getEnkfFsManager().getFileSystem() - enkf_plot_data = EnsemblePlotData(ensemble_config_node, enkf_fs) - - result = [] - for index in range(len(enkf_plot_data)): - result.append(self.getRealizationData(key, enkf_plot_data[index])) - - - return result - - - def getEnsembleData(self): - keys = self.getSummaryKeys() - - result = {} - for key in keys: - result[key] = self.getEnsembleDataForKey(key) - - return result - - - def getEnsembleDataForKeyAndCase(self, key, case): - """ @rtype: list of SampleList """ - ensemble_config_node = self.getEnsembleConfigNode(key) - enkf_fs = self.ert().getEnkfFsManager().mountAlternativeFileSystem(case, True, False) + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(case) ensemble_plot_data = EnsemblePlotData(ensemble_config_node, enkf_fs) - statistics = [] - result = [] - for index in range(len(ensemble_plot_data)): - sample_list = self.getRealizationData(key, ensemble_plot_data[index]) - result.append(sample_list) - - for index in range(len(sample_list.samples)): - if index == len(statistics): - statistics.append(SampleStatistics()) - statistics[index].addSample(sample_list.samples[index]) + data = { + "x": [], + "y": [], + "min_y_values": [], + "max_y_values": [], + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None + } + time_map = enkf_fs.getTimeMap() - return result, statistics + for index in range(1, len(time_map)): + data["x"].append(time_map[index].ctime()) + data["min_y_values"].append(None) + data["max_y_values"].append(None) + data["min_x"] = data["x"][0] + data["max_x"] = data["x"][len(data["x"]) - 1] + for vector in ensemble_plot_data: + y = [] + data["y"].append(y) + # skip index 0 (not a valid simulation value...) + for index in range(len(vector) - 1): + if vector.isActive(index + 1): + y_value = vector.getValue(index + 1) + y.append(y_value) + if data["min_y"] is None or data["min_y"] > y_value: + data["min_y"] = y_value + if data["max_y"] is None or data["max_y"] < y_value: + data["max_y"] = y_value + if data["min_y_values"][index] is None or data["min_y_values"][index] > y_value: + data["min_y_values"][index] = y_value + if data["max_y_values"][index] is None or data["max_y_values"][index] < y_value: + data["max_y_values"][index] = y_value + return data diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_data_fetcher.py new file mode 100644 index 0000000000..484f0038c3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_data_fetcher.py @@ -0,0 +1,71 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_gen_data_fetcher.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.enkf.plot_data import EnsemblePlotGenData +from ert.enkf.plot import DataFetcher + + +class EnsembleGenDataFetcher(DataFetcher): + def __init__(self, ert): + super(EnsembleGenDataFetcher, self).__init__(ert) + + def fetchSupportedKeys(self): + gen_data_list = [] + + return gen_data_list + + def getEnsembleConfigNode(self, key): + """ @rtype: EnsConfig """ + ensemble_config = self.ert().ensembleConfig() + assert ensemble_config.hasKey(key) + return ensemble_config.getNode(key) + + def fetchData(self, key, case=None): + key, report_step = key.split("@") + report_step = int(report_step) + + ensemble_config_node = self.getEnsembleConfigNode(key) + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(case) + ensemble_plot_gen_data = EnsemblePlotGenData(ensemble_config_node, enkf_fs, report_step) + + data = {"x": [], + "y": [], + "min_y_values": [value for value in ensemble_plot_gen_data.getMinValues()], + "max_y_values": [value for value in ensemble_plot_gen_data.getMaxValues()], + "min_y": None, + "max_y": None, + "min_x": 0, + "max_x": None} + + data["x"] = [index for index in range(len(data["min_y_values"]))] + data["max_x"] = len(data["min_y_values"]) - 1 + + for vector in ensemble_plot_gen_data: + y = [] + data["y"].append(y) + + for value in vector: + y.append(value) + + if data["min_y"] is None or data["min_y"] > value: + data["min_y"] = value + + if data["max_y"] is None or data["max_y"] < value: + data["max_y"] = value + + + + return data + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_kw_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_kw_fetcher.py new file mode 100644 index 0000000000..8d04782b82 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/ensemble_gen_kw_fetcher.py @@ -0,0 +1,80 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_gen_kw_fetcher.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.enkf.data.gen_kw_config import GenKwConfig +from ert.enkf.plot_data import EnsemblePlotGenKW +from ert.enkf.enums.ert_impl_type_enum import ErtImplType +from ert.enkf.plot import DataFetcher + + +class EnsembleGenKWFetcher(DataFetcher): + def __init__(self, ert): + super(EnsembleGenKWFetcher, self).__init__(ert) + + def fetchSupportedKeys(self): + gen_kw_keys = self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.GEN_KW) + gen_kw_list = [] + for key in gen_kw_keys: + enkf_config_node = self.ert().ensembleConfig().getNode(key) + model_config = enkf_config_node.getModelConfig() + assert isinstance(model_config, GenKwConfig) + + model_keys = model_config.getKeyWords() + for key_word in model_keys: + gen_kw_list.append("%s:%s" % (key, key_word)) + + return gen_kw_list + + + def getEnsembleConfigNode(self, key): + """ @rtype: EnsConfig """ + ensemble_config = self.ert().ensembleConfig() + assert ensemble_config.hasKey(key) + return ensemble_config.getNode(key) + + + def fetchData(self, key, case=None): + key, keyword = key.split(":") + ensemble_config_node = self.getEnsembleConfigNode(key) + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(case) + ensemble_plot_gen_kw = EnsemblePlotGenKW(ensemble_config_node, enkf_fs) + keyword_index = ensemble_plot_gen_kw.getIndexForKeyword(keyword) + + use_log_scale = ensemble_plot_gen_kw.shouldUseLogScale(keyword_index) + + data = {"x": [0], + "y": [], + "min_y": None, + "max_y": None, + "min_x": 0, + "max_x": 0, + "use_log_scale": use_log_scale} + + for vector in ensemble_plot_gen_kw: + y = [] + data["y"].append(y) + + if len(vector) > keyword_index: + value = vector.getValue(keyword_index) + y.append(value) + + if data["min_y"] is None or data["min_y"] > value: + data["min_y"] = value + + if data["max_y"] is None or data["max_y"] < value: + data["max_y"] = value + + return data + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_data_fetcher.py index 3a65a42439..c6e4830e81 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_data_fetcher.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_data_fetcher.py @@ -1,99 +1,91 @@ from ert.enkf import EnkfObservationImplementationType -from ert.enkf.plot import DataFetcher, Sample, SampleListCollection, SampleList +from ert.enkf.enums import ErtImplType +from ert.enkf.plot import DataFetcher class ObservationDataFetcher(DataFetcher): def __init__(self, ert): super(ObservationDataFetcher, self).__init__(ert) - def getObservationKeys(self): observations = self.ert().getObservations() keys = observations.getTypedKeylist(EnkfObservationImplementationType.SUMMARY_OBS) keys = sorted(keys) return keys - def getFirstReportStep(self): - return self.ert().getObservations().getObservationTime(0).ctime() - - def getLastReportStep(self): - history_length = self.ert().getHistoryLength() - return self.ert().getObservations().getObservationTime(history_length - 1).ctime() - - - def getObservationsForKey(self, key): - """ @rtype: SampleList """ - obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() - - if len(obs_keys) == 0: - return None - - sample_list = SampleList() - sample_list.group = key - sample_list.min_x = self.getFirstReportStep() - sample_list.max_x = self.getLastReportStep() - - for obs_key in obs_keys: - observations = self.getObservations(obs_key) - - for observation in observations: - sample_list.addSample(observation) - - return sample_list + def fetchSupportedKeys(self): + """ @rtype: list of str """ + return sorted([key for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.SUMMARY)]) - - def getObservations(self, key): - """ @rtype: list of Sample """ + def __getObservationData(self, key, data): observations = self.ert().getObservations() assert observations.hasKey(key) - observation_data = observations.getObservationsVector(key) + + observation_data = observations[key] active_count = observation_data.getActiveCount() - result = [] history_length = self.ert().getHistoryLength() for index in range(0, history_length): if observation_data.isActive(index): - sample = Sample() - sample.index = index - sample.x = observations.getObservationTime(index).ctime() + x_value = int(observations.getObservationTime(index).ctime()) + data["x"].append(x_value) #: :type: SummaryObservation node = observation_data.getNode(index) - sample.y = node.getValue() - sample.std = node.getStandardDeviation() - sample.group = node.getSummaryKey() - sample.name = key + y_value = node.getValue() + std = node.getStandardDeviation() + data["y"].append(float(y_value)) + data["std"].append(float(std)) - if active_count == 1: - sample.single_point = True + if data["min_x"] is None or data["min_x"] > x_value: + data["min_x"] = x_value + + if data["max_x"] is None or data["max_x"] < x_value: + data["max_x"] = x_value + + + adjusted_y = self.adjustY(y_value, std) - result.append(sample) + if data["min_y"] is None or data["min_y"] > adjusted_y: + data["min_y"] = adjusted_y - return result + if data["max_y"] is None or data["max_y"] < y_value + std: + data["max_y"] = y_value + std - def getAllObservations(self): - keys = self.getObservationKeys() + if active_count == 1: + data["continuous"] = False + + @staticmethod + def adjustY(y, std): + if y >= 0: + return max(0, y - std) - result = SampleListCollection() + return y - std - for key in keys: - observations = self.getObservations(key) - for observation in observations: - if not observation.group in result: - sample_list = SampleList() - sample_list.group = observation.group - sample_list.min_x = self.getFirstReportStep() - sample_list.max_x = self.getLastReportStep() + def fetchData(self, key, case=None): + obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() + history_length = self.ert().getHistoryLength() - result.addSampleList(sample_list) + data = {"continuous": True, + "x": None, + "y": None, + "std": None, + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None} - result[observation.group].addSample(observation) + if len(obs_keys) == 0: + return data - return result + data["x"] = [] + data["y"] = [] + data["std"] = [] - def fetchData(self): - return self.getAllObservations() + for obs_key in obs_keys: + self.__getObservationData(obs_key, data) + return data diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_gen_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_gen_data_fetcher.py new file mode 100644 index 0000000000..53f7d5b7f8 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/observation_gen_data_fetcher.py @@ -0,0 +1,115 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'observation_gen_data_fetcher.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.enkf.enums.ert_impl_type_enum import ErtImplType +from ert.enkf.plot import DataFetcher + + +class ObservationGenDataFetcher(DataFetcher): + def __init__(self, ert): + super(ObservationGenDataFetcher, self).__init__(ert) + + def fetchSupportedKeys(self): + gen_data_keys = self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.GEN_DATA) + gen_data_list = [] + for key in gen_data_keys: + obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() + for obs_key in obs_keys: + obs_vector = self.ert().getObservations()[obs_key] + for report_step in obs_vector: + gen_data_list.append("%s@%d" % (key, report_step)) + + return gen_data_list + + def __getObservationData(self, key, report_step): + data = {"continuous": True, + "x": [], + "y": [], + "std": [], + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None} + + observations = self.ert().getObservations() + assert observations.hasKey(key) + + gen_obs = observations[key].getNode(report_step) + + size = gen_obs.getSize() + + data["min_x"] = 0 + data["max_x"] = size - 1 + for index in range(0, size): + std = gen_obs.getStandardDeviation(index) + data["std"].append(std) + y_value = gen_obs.getValue(index) + data["y"].append(y_value) + + adjusted_y = self.adjustY(y_value, std) + + if data["min_y"] is None or data["min_y"] > adjusted_y: + data["min_y"] = adjusted_y + + if data["max_y"] is None or data["max_y"] < y_value + std: + data["max_y"] = y_value + std + + obs_index = gen_obs.getIndex(index) + data["x"].append(obs_index) + + return data + + + def getObsKeyForKey(self, key, key_report_step): + obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() + for obs_key in obs_keys: + obs_vector = self.ert().getObservations()[obs_key] + for report_step in obs_vector: + if report_step == key_report_step: + return obs_key + + raise UserWarning("Observation key for key '%s' not found!" % key) + + + def getAllObsKeysForKey(self, key): + key, report_step = key.split("@") + return self.ert().ensembleConfig().getNode(key).getObservationKeys() + + + def hasData(self, key): + """ @rtype: bool """ + key, report_step = key.split("@") + observations = self.ert().getObservations() + obs_key = self.getObsKeyForKey(key, int(report_step)) + if not observations.hasKey(obs_key): + return False + + return observations[obs_key].getActiveCount() > 0 + + def fetchData(self, key, case=None): + key, report_step = key.split("@") + + key_report_step = int(report_step) + obs_key = self.getObsKeyForKey(key, key_report_step) + + return self.__getObservationData(obs_key, key_report_step) + + + @staticmethod + def adjustY(y, std): + if y >= 0: + return max(0, y - std) + + return y - std \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/pca_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/pca_fetcher.py new file mode 100644 index 0000000000..e004696b22 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/pca_fetcher.py @@ -0,0 +1,183 @@ +from ert.enkf.plot import DataFetcher, ObservationGenDataFetcher, BlockObservationDataFetcher, EnsembleDataFetcher +from ert.enkf.plot_data import PcaPlotData +from ert.enkf.enums import EnkfStateType, RealizationStateEnum, EnkfObservationImplementationType +from ert.enkf import LocalObsdata, LocalObsdataNode, EnkfLinalg, MeasData, ObsData +from ert.util import Matrix, BoolVector, DoubleVector + + +class PcaDataFetcher(DataFetcher): + def __init__(self, ert): + super(PcaDataFetcher, self).__init__(ert) + self.__prior_singular_values = None + + def fetchSupportedKeys(self): + summary_keys = EnsembleDataFetcher(self.ert()).getSupportedKeys() + + keys = [] + for key in summary_keys: + obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() + if len(obs_keys) > 0: + keys.append(key) + + keys += BlockObservationDataFetcher(self.ert()).getSupportedKeys() + keys += ObservationGenDataFetcher(self.ert()).getSupportedKeys() + + return keys + + + def truncationOrNumberOfComponents(self, truncation_or_ncomp): + """ @rtype: (float, int) """ + truncation = -1 + ncomp = -1 + + if truncation_or_ncomp < 1: + truncation = truncation_or_ncomp + else: + ncomp = int(truncation_or_ncomp) + + return truncation, ncomp + + + def calculatePrincipalComponent(self, fs, local_obsdata, truncation_or_ncomp=3): + pc = Matrix(1, 1) + pc_obs = Matrix(1, 1) + singular_values = DoubleVector() + + state_map = fs.getStateMap() + ens_mask = BoolVector(False, self.ert().getEnsembleSize()) + state_map.selectMatching(ens_mask, RealizationStateEnum.STATE_HAS_DATA) + active_list = BoolVector.createActiveList(ens_mask) + + if len(active_list) > 0: + state = EnkfStateType.FORECAST + meas_data = MeasData(active_list) + obs_data = ObsData() + + self.ert().getObservations().getObservationAndMeasureData(fs, local_obsdata, state, active_list, meas_data, obs_data) + + meas_data.deactivateZeroStdSamples(obs_data) + + active_size = len(obs_data) + + if active_size > 0: + S = meas_data.createS(active_size) + D_obs = obs_data.createDobs(active_size) + + truncation, ncomp = self.truncationOrNumberOfComponents(truncation_or_ncomp) + + obs_data.scale(S, D_obs=D_obs) + EnkfLinalg.calculatePrincipalComponents(S, D_obs, truncation, ncomp, pc, pc_obs, singular_values) + if self.__prior_singular_values is None: + self.__prior_singular_values = singular_values + else: + for row in range(pc.rows()): + factor = singular_values[row]/self.__prior_singular_values[row] + pc.scaleRow( row , factor ) + pc_obs.scaleRow( row , factor ) + + + return PcaPlotData(local_obsdata.getName(), pc , pc_obs , singular_values) + return None + + + + def getAllObsKeys(self): + observations = self.ert().getObservations() + summary_obs_keys = observations.getTypedKeylist(EnkfObservationImplementationType.SUMMARY_OBS) + gen_data_obs_keys = observations.getTypedKeylist(EnkfObservationImplementationType.GEN_OBS) + block_obs_keys = observations.getTypedKeylist(EnkfObservationImplementationType.BLOCK_OBS) + + summary_obs_keys = [key for key in summary_obs_keys] + gen_data_obs_keys = [key for key in gen_data_obs_keys] + block_obs_keys = [key for key in block_obs_keys] + + return summary_obs_keys + gen_data_obs_keys + block_obs_keys + + + def getObsKeys(self, data_key): + ensemble_data_fetcher = EnsembleDataFetcher(self.ert()) + block_observation_data_fetcher = BlockObservationDataFetcher(self.ert()) + gen_data_observation_data_fetcher = ObservationGenDataFetcher(self.ert()) + + if ensemble_data_fetcher.supportsKey(data_key): + return self.ert().ensembleConfig().getNode(data_key).getObservationKeys() + elif block_observation_data_fetcher.supportsKey(data_key): + return [data_key] + elif gen_data_observation_data_fetcher.supportsKey(data_key): + return gen_data_observation_data_fetcher.getAllObsKeysForKey(data_key) + + + def filterObsKeys(self, obs_keys, fs): + active_mask = BoolVector(True, self.ert().getEnsembleSize()) + ert_obs = self.ert().getObservations() + + result = [] + for obs_key in obs_keys: + obsVector = ert_obs[obs_key] + if obsVector.hasData(active_mask, fs): + result.append(obs_key) + return result + + + def fetchData(self, obs_keys, case=None): + data = {"x": None, + "y": None, + "obs_y": None, + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None} + + fs = self.ert().getEnkfFsManager().getFileSystem(case) + obs_keys = self.filterObsKeys(obs_keys, fs) + + step_1 = 0 + step_2 = self.ert().getHistoryLength() + + local_obsdata = LocalObsdata("PCA Observations %s" % case) + + for obs_key in obs_keys: + if not obs_key in local_obsdata: + obs_node = LocalObsdataNode(obs_key) + obs_node.addRange(step_1, step_2) + local_obsdata.addNode(obs_node) + + if len(local_obsdata) > 0: + pca_data = self.calculatePrincipalComponent(fs, local_obsdata) + + if pca_data is not None: + data["x"] = [] + data["y"] = [] + data["obs_y"] = [] + + data["min_x"] = 1 + data["max_x"] = len(pca_data) + + component_number = 0 + for pca_vector in pca_data: + component_number += 1 + data["x"].append(component_number) + + obs_y = pca_vector.getObservation() + + if data["min_y"] is None or data["min_y"] > obs_y: + data["min_y"] = obs_y + + if data["max_y"] is None or data["max_y"] < obs_y: + data["max_y"] = obs_y + + data["obs_y"].append(obs_y) + for index, value in enumerate(pca_vector): + if len(data["y"]) == index: + data["y"].append([]) + + y = data["y"][index] + y.append(value) + + if data["min_y"] is None or data["min_y"] > value: + data["min_y"] = value + + if data["max_y"] is None or data["max_y"] < value: + data["max_y"] = value + + return data diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/plot_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/plot_data_fetcher.py deleted file mode 100644 index 39e80897c6..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/plot_data_fetcher.py +++ /dev/null @@ -1,103 +0,0 @@ -import time -from ert.enkf.plot import DataFetcher, PlotData, SampleListCollection, ObservationDataFetcher, RefcaseDataFetcher -from ert.enkf.plot.ensemble_data_fetcher import EnsembleDataFetcher - - -class PlotDataFetcher(DataFetcher): - def __init__(self, ert): - super(PlotDataFetcher, self).__init__(ert) - - - def fetchData(self): - observations = ObservationDataFetcher(self.ert()).fetchData() - refcase = RefcaseDataFetcher(self.ert()).fetchData() - ensemble_plot_data = EnsembleDataFetcher(self.ert()).fetchData() - - result = {} - result["keys"] = [] - result["observation_keys"] = [] - """ @type: dict of (str, PlotData) """ - - for key in refcase.sample_lists_keys: - sample_list = refcase[key] - """ @type: SampleList """ - - if not key in result: - result[key] = PlotData() - result[key].name = key - result["keys"].append(key) - - result[key].setRefcase(sample_list) - - - sorted_keys = sorted(ensemble_plot_data.keys()) - for key in sorted_keys: - if not key in result: - result[key] = PlotData() - result[key].name = key - result["keys"].append(key) - - result[key].setEnsemble(ensemble_plot_data[key]) - - - for key in observations.sample_lists_keys: - sample_list = observations[key] - """ @type: SampleList """ - - if not key in result: - result[key] = PlotData() - result[key].name = key - result["keys"].append(key) - - result["observation_keys"].append(key) - result[key].setObservations(sample_list) - - - result["keys"] = sorted(result["keys"]) - result["observation_keys"] = sorted(result["observation_keys"]) - - return result - - def fetchDataForKey(self, key): - """ @rtype: PlotData """ - plot_data = PlotData() - plot_data.name = key - - observations = ObservationDataFetcher(self.ert()).getObservationsForKey(key) - refcase = RefcaseDataFetcher(self.ert()).getRefcaseDataForKey(key) - ensemble_plot_data = EnsembleDataFetcher(self.ert()).getEnsembleDataForKey(key) - - if not observations is None: - plot_data.setObservations(observations) - - if not refcase is None: - plot_data.setRefcase(refcase) - - if len(ensemble_plot_data) > 0: - plot_data.setEnsemble(ensemble_plot_data) - - return plot_data - - def fetchDataForKeyAndCases(self, key, cases): - plot_data = PlotData() - plot_data.name = key - - observations = ObservationDataFetcher(self.ert()).getObservationsForKey(key) - refcase = RefcaseDataFetcher(self.ert()).getRefcaseDataForKey(key) - - if not observations is None: - plot_data.setObservations(observations) - - if not refcase is None: - plot_data.setRefcase(refcase) - - for case in cases: - ensemble_plot_data, ensemble_statistics = EnsembleDataFetcher(self.ert()).getEnsembleDataForKeyAndCase(key, case) - if len(ensemble_plot_data) > 0: - plot_data.addEnsemble(case, ensemble_plot_data, ensemble_statistics) - - return plot_data - - - - diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/refcase_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/refcase_data_fetcher.py index 64df6c019b..cc4d1ce158 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot/refcase_data_fetcher.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot/refcase_data_fetcher.py @@ -1,6 +1,5 @@ from ert.ecl import EclSum, EclSumVector, EclSumNode from ert.enkf.enums import ErtImplType -from ert.enkf.plot import Sample, SampleListCollection, SampleList from ert.enkf.plot.data_fetcher import DataFetcher @@ -10,10 +9,6 @@ def __init__(self, ert): self.report_times = {} - def fetchData(self): - """ @rtype: SampleListCollection """ - return self.getRefcaseData() - def hasRefcase(self): """ @rtype: bool """ return self.ert().eclConfig().hasRefcase() @@ -26,81 +21,53 @@ def getSummaryKeys(self): """ @rtype: StringList """ return self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.SUMMARY) - def __getRefcaseDataForKey(self, key): - """ @rtype: list of Sample """ - refcase = self.getRefCase() - vector = refcase.get_vector(key, report_only=True) - - result = [] - index = 0 - for node in vector: - assert isinstance(node, EclSumNode) - - sample = Sample() - sample.y = node.value - sample.group = key - sample.name = key - sample.index = index - sample.x = self.getReportStepTime(node.report_step) - result.append(sample) - - index += 1 - return result + def fetchData(self, key, case=None): + data = {"x": None, + "y": None, + "min_y": None, + "max_y": None, + "min_x": None, + "max_x": None} - def getRefcaseDataForKey(self, key): - """ @rtype: SampleList """ if not self.hasRefcase(): - return None + return data - sample_list = SampleList() - sample_list.min_x = self.getFirstReportStepTime() - sample_list.max_x = self.getLastReportStepTime() - data = self.__getRefcaseDataForKey(key) - - for sample_point in data: - sample_list.group = sample_point.group - sample_list.addSample(sample_point) - - return sample_list + refcase = self.getRefCase() + vector = refcase.get_vector(key, report_only=False) + data["x"] = [] + data["y"] = [] + for index in range(1, len(vector)): + node = vector[index] - def getRefcaseData(self): - if not self.hasRefcase(): - return SampleListCollection() + x_value = self.getReportStepTimeFromRefcase(refcase, node.report_step) + data["x"].append(int(x_value)) - keys = self.getSummaryKeys() - first_report_step_time = self.getFirstReportStepTime() - last_report_step_time = self.getLastReportStepTime() + if data["min_x"] is None or data["min_x"] > x_value: + data["min_x"] = x_value - result = SampleListCollection() - for key in keys: - data = self.__getRefcaseDataForKey(key) + if data["max_x"] is None or data["max_x"] < x_value: + data["max_x"] = x_value - for sample_point in data: - if not sample_point.group in result: - sample_list = SampleList() - sample_list.group = sample_point.group - sample_list.min_x = first_report_step_time - sample_list.max_x = last_report_step_time - result.addSampleList(sample_list) + value = node.value + data["y"].append(float(value)) - result[sample_point.group].addSample(sample_point) + if data["min_y"] is None or data["min_y"] > value: + data["min_y"] = value - return result + if data["max_y"] is None or data["max_y"] < value: + data["max_y"] = value - def getFirstReportStepTime(self): - return self.getReportStepTime(self.getRefCase().first_report) + return data - def getLastReportStepTime(self): - return self.getReportStepTime(self.getRefCase().last_report) - def getReportStepTime(self, report_step): + def getReportStepTimeFromRefcase(self, refcase, report_step): if not report_step in self.report_times: - self.report_times[report_step] = EclSum.cNamespace().get_report_time(self.getRefCase(), report_step).ctime() + self.report_times[report_step] = EclSum.cNamespace().get_report_time(refcase, report_step).ctime() return self.report_times[report_step] diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_config.py index 2508051d1c..9231832392 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_config.py @@ -21,7 +21,7 @@ class PlotConfig(BaseCClass): def __init__(self): raise NotImplementedError("Class can not be instantiated directly!") - def get_path(self): + def getPath(self): """ @rtype: str """ return PlotConfig.cNamespace().get_path(self) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/CMakeLists.txt new file mode 100644 index 0000000000..b56289400e --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/CMakeLists.txt @@ -0,0 +1,17 @@ +set(PYTHON_SOURCES + __init__.py + ensemble_plot_data.py + ensemble_plot_data_vector.py + ensemble_plot_gen_data.py + ensemble_plot_gen_data_vector.py + ensemble_plot_gen_kw.py + ensemble_plot_gen_kw_vector.py + pca_plot_data.py + pca_plot_vector.py + plot_block_data.py + plot_block_data_loader.py + plot_block_vector.py +) + +add_python_package("python.ert.enkf.plot_data" ${PYTHON_INSTALL_PREFIX}/ert/enkf/plot_data "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/__init__.py new file mode 100644 index 0000000000..5e957583af --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/__init__.py @@ -0,0 +1,12 @@ +from .ensemble_plot_data_vector import EnsemblePlotDataVector +from .ensemble_plot_data import EnsemblePlotData +from .plot_block_vector import PlotBlockVector +from .plot_block_data import PlotBlockData +from .plot_block_data_loader import PlotBlockDataLoader +from .ensemble_plot_gen_data_vector import EnsemblePlotGenDataVector +from .ensemble_plot_gen_data import EnsemblePlotGenData +from .ensemble_plot_gen_kw_vector import EnsemblePlotGenKWVector +from .ensemble_plot_gen_kw import EnsemblePlotGenKW +from .pca_plot_vector import PcaPlotVector +from .pca_plot_data import PcaPlotData + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data.py similarity index 94% rename from ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data.py rename to ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data.py index 719bfd6996..c0c84b27ca 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data.py @@ -33,6 +33,12 @@ def __getitem__(self, index): """ @rtype: EnsemblePlotDataVector """ return EnsemblePlotData.cNamespace().get(self, index) + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + def free(self): EnsemblePlotData.cNamespace().free(self) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data_vector.py similarity index 96% rename from ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data_vector.py rename to ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data_vector.py index 7808ed3d60..c141df5207 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ensemble_data/ensemble_plot_data_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_data_vector.py @@ -1,6 +1,6 @@ from ert.cwrap import BaseCClass, CWrapper from ert.enkf import ENKF_LIB -from ert.util import ctime +from ert.util import CTime @@ -17,7 +17,7 @@ def getValue(self, index): return EnsemblePlotDataVector.cNamespace().get_value(self, index) def getTime(self, index): - """ @rtype: ctime """ + """ @rtype: CTime """ return EnsemblePlotDataVector.cNamespace().get_time(self, index) def isActive(self, index): diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data.py new file mode 100644 index 0000000000..34f4183da7 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data.py @@ -0,0 +1,90 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_plot_gen_data.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.enkf.data import EnkfConfigNode +from ert.enkf.enkf_fs import EnkfFs +from ert.enkf.enums.enkf_state_type_enum import EnkfStateType +from ert.enkf.enums.ert_impl_type_enum import ErtImplType +from ert.util import BoolVector, DoubleVector + + +class EnsemblePlotGenData(BaseCClass): + def __init__(self, ensemble_config_node, file_system, report_step, state=EnkfStateType.FORECAST, input_mask=None): + assert isinstance(ensemble_config_node, EnkfConfigNode) + assert ensemble_config_node.getImplementationType() == ErtImplType.GEN_DATA + + c_pointer = EnsemblePlotGenData.cNamespace().alloc(ensemble_config_node) + super(EnsemblePlotGenData, self).__init__(c_pointer) + + self.__load(file_system, report_step, state, input_mask) + + + def __load(self, file_system, report_step, state=EnkfStateType.FORECAST, input_mask=None): + assert isinstance(file_system, EnkfFs) + assert isinstance(state, EnkfStateType) + if not input_mask is None: + assert isinstance(input_mask, BoolVector) + + EnsemblePlotGenData.cNamespace().load(self, file_system, report_step, state, input_mask) + + def __len__(self): + """ @rtype: int """ + return EnsemblePlotGenData.cNamespace().size(self) + + def __getitem__(self, index): + """ @rtype: EnsemblePlotGenDataVector """ + return EnsemblePlotGenData.cNamespace().get(self, index) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + + def getMaxValues(self): + """ @rtype: DoubleVector """ + return EnsemblePlotGenData.cNamespace().max_values(self).setParent(self) + + def getMinValues(self): + """ @rtype: DoubleVector """ + return EnsemblePlotGenData.cNamespace().min_values(self).setParent(self) + + def free(self): + EnsemblePlotGenData.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("ensemble_plot_gen_data", EnsemblePlotGenData) +cwrapper.registerType("ensemble_plot_gen_data_obj", EnsemblePlotGenData.createPythonObject) +cwrapper.registerType("ensemble_plot_gen_data_ref", EnsemblePlotGenData.createCReference) + +EnsemblePlotGenData.cNamespace().free = cwrapper.prototype("void enkf_plot_gendata_free(ensemble_plot_gen_data)") +EnsemblePlotGenData.cNamespace().alloc = cwrapper.prototype("c_void_p enkf_plot_gendata_alloc(enkf_config_node)") + +EnsemblePlotGenData.cNamespace().size = cwrapper.prototype("int enkf_plot_gendata_get_size(ensemble_plot_gen_data)") +EnsemblePlotGenData.cNamespace().load = cwrapper.prototype("void enkf_plot_gendata_load(ensemble_plot_gen_data, enkf_fs, int, enkf_state_type_enum, bool_vector)") +EnsemblePlotGenData.cNamespace().get = cwrapper.prototype("ensemble_plot_gen_data_vector_ref enkf_plot_gendata_iget(ensemble_plot_gen_data, int)") + +EnsemblePlotGenData.cNamespace().min_values = cwrapper.prototype("double_vector_ref enkf_plot_gendata_get_min_values(ensemble_plot_gen_data)") +EnsemblePlotGenData.cNamespace().max_values = cwrapper.prototype("double_vector_ref enkf_plot_gendata_get_max_values(ensemble_plot_gen_data)") + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data_vector.py new file mode 100644 index 0000000000..4cdd08c9fc --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_data_vector.py @@ -0,0 +1,52 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_plot_gen_data_vector.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB + +class EnsemblePlotGenDataVector(BaseCClass): + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def __len__(self): + """ @rtype: int """ + return EnsemblePlotGenDataVector.cNamespace().size(self) + + def getValue(self, index): + """ @rtype: float """ + return self[index] + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def __getitem__(self, index): + """ @rtype: float """ + return EnsemblePlotGenDataVector.cNamespace().get_value(self, index) + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("ensemble_plot_gen_data_vector", EnsemblePlotGenDataVector) +cwrapper.registerType("ensemble_plot_gen_data_vector_obj", EnsemblePlotGenDataVector.createPythonObject) +cwrapper.registerType("ensemble_plot_gen_data_vector_ref", EnsemblePlotGenDataVector.createCReference) + +EnsemblePlotGenDataVector.cNamespace().size = cwrapper.prototype("int enkf_plot_genvector_get_size(ensemble_plot_gen_data_vector)") +EnsemblePlotGenDataVector.cNamespace().get_value = cwrapper.prototype("double enkf_plot_genvector_iget(ensemble_plot_gen_data_vector, int)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw.py new file mode 100644 index 0000000000..07d7c6ee00 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw.py @@ -0,0 +1,105 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_plot_gen_kw.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.enkf.data import EnkfConfigNode +from ert.enkf.enkf_fs import EnkfFs +from ert.enkf.enums.enkf_state_type_enum import EnkfStateType +from ert.enkf.enums.ert_impl_type_enum import ErtImplType +from ert.util import BoolVector +from ert.enkf.plot_data import EnsemblePlotGenKWVector + + +class EnsemblePlotGenKW(BaseCClass): + def __init__(self, ensemble_config_node, file_system, state=EnkfStateType.FORECAST, input_mask=None): + assert isinstance(ensemble_config_node, EnkfConfigNode) + assert ensemble_config_node.getImplementationType() == ErtImplType.GEN_KW + + c_pointer = EnsemblePlotGenKW.cNamespace().alloc(ensemble_config_node) + super(EnsemblePlotGenKW, self).__init__(c_pointer) + + self.__load(file_system, state, input_mask) + + + def __load(self, file_system, state=EnkfStateType.FORECAST, input_mask=None): + assert isinstance(file_system, EnkfFs) + assert isinstance(state, EnkfStateType) + if not input_mask is None: + assert isinstance(input_mask, BoolVector) + + EnsemblePlotGenKW.cNamespace().load(self, file_system, True, 0, state, input_mask) + + def __len__(self): + """ @rtype: int """ + return EnsemblePlotGenKW.cNamespace().size(self) + + def __getitem__(self, index): + """ @rtype: EnsemblePlotGenKWVector """ + return EnsemblePlotGenKW.cNamespace().get(self, index) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def getKeyWordCount(self): + """ @rtype: int """ + return EnsemblePlotGenKW.cNamespace().get_keyword_count(self) + + def getKeyWordForIndex(self, index): + """ @rtype: str """ + return EnsemblePlotGenKW.cNamespace().iget_key(self, index) + + def getIndexForKeyword(self, keyword): + """ @rtype: int """ + for index in range(self.getKeyWordCount()): + kw = self.getKeyWordForIndex(index) + if kw == keyword: + return index + return None + + def shouldUseLogScale(self, index): + """ @rtype: bool """ + return bool(EnsemblePlotGenKW.cNamespace().should_use_log_scale(self, index)) + + def free(self): + EnsemblePlotGenKW.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("ensemble_plot_gen_kw", EnsemblePlotGenKW) +cwrapper.registerType("ensemble_plot_gen_kw_obj", EnsemblePlotGenKW.createPythonObject) +cwrapper.registerType("ensemble_plot_gen_kw_ref", EnsemblePlotGenKW.createCReference) + +EnsemblePlotGenKW.cNamespace().free = cwrapper.prototype("void enkf_plot_gen_kw_free(ensemble_plot_gen_kw)") +EnsemblePlotGenKW.cNamespace().alloc = cwrapper.prototype("c_void_p enkf_plot_gen_kw_alloc(enkf_config_node)") + +EnsemblePlotGenKW.cNamespace().size = cwrapper.prototype("int enkf_plot_gen_kw_get_size(ensemble_plot_gen_kw)") +EnsemblePlotGenKW.cNamespace().load = cwrapper.prototype("void enkf_plot_gen_kw_load(ensemble_plot_gen_kw, enkf_fs, bool, int, enkf_state_type_enum, bool_vector)") +EnsemblePlotGenKW.cNamespace().get = cwrapper.prototype("ensemble_plot_gen_kw_vector_ref enkf_plot_gen_kw_iget(ensemble_plot_gen_kw, int)") +EnsemblePlotGenKW.cNamespace().iget_key = cwrapper.prototype("char* enkf_plot_gen_kw_iget_key(ensemble_plot_gen_kw, int)") +EnsemblePlotGenKW.cNamespace().get_keyword_count = cwrapper.prototype("int enkf_plot_gen_kw_get_keyword_count(ensemble_plot_gen_kw)") +EnsemblePlotGenKW.cNamespace().should_use_log_scale = cwrapper.prototype("bool enkf_plot_gen_kw_should_use_log_scale(ensemble_plot_gen_kw, int)") + + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw_vector.py new file mode 100644 index 0000000000..e081d6add8 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/ensemble_plot_gen_kw_vector.py @@ -0,0 +1,52 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ensemble_plot_gen_kw_vector.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB + +class EnsemblePlotGenKWVector(BaseCClass): + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def __len__(self): + """ @rtype: int """ + return EnsemblePlotGenKWVector.cNamespace().size(self) + + def getValue(self, index): + """ @rtype: float """ + return self[index] + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def __getitem__(self, index): + """ @rtype: float """ + return EnsemblePlotGenKWVector.cNamespace().get_value(self, index) + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("ensemble_plot_gen_kw_vector", EnsemblePlotGenKWVector) +cwrapper.registerType("ensemble_plot_gen_kw_vector_obj", EnsemblePlotGenKWVector.createPythonObject) +cwrapper.registerType("ensemble_plot_gen_kw_vector_ref", EnsemblePlotGenKWVector.createCReference) + +EnsemblePlotGenKWVector.cNamespace().size = cwrapper.prototype("int enkf_plot_gen_kw_vector_get_size(ensemble_plot_gen_kw_vector)") +EnsemblePlotGenKWVector.cNamespace().get_value = cwrapper.prototype("double enkf_plot_gen_kw_vector_iget(ensemble_plot_gen_kw_vector, int)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_data.py new file mode 100644 index 0000000000..5379cca556 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_data.py @@ -0,0 +1,55 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.util import Matrix +from ert.enkf.plot_data import PcaPlotVector + + +class PcaPlotData(BaseCClass): + + def __init__(self, name, principal_component_matrix, observation_principal_component_matrix, singular_values): + assert isinstance(name, str) + assert isinstance(principal_component_matrix, Matrix) + assert isinstance(observation_principal_component_matrix, Matrix) + + c_pointer = PcaPlotData.cNamespace().alloc(name, principal_component_matrix, observation_principal_component_matrix , singular_values) + super(PcaPlotData, self).__init__(c_pointer) + + + def __len__(self): + """ @rtype: int """ + return PcaPlotData.cNamespace().component_count(self) + + + def __getitem__(self, index): + """ @rtype: PcaPlotVector """ + assert isinstance(index, int) + return PcaPlotData.cNamespace().get(self, index).setParent(self) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def getSingularValues(self): + """ @rtype: DoubleVector """ + return PcaPlotData.cNamespace().get_singular_values(self).setParent(self) + + def free(self): + PcaPlotData.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("pca_plot_data", PcaPlotData) +cwrapper.registerType("pca_plot_data_obj", PcaPlotData.createPythonObject) +cwrapper.registerType("pca_plot_data_ref", PcaPlotData.createCReference) + +PcaPlotData.cNamespace().alloc = cwrapper.prototype("c_void_p pca_plot_data_alloc(char*, matrix, matrix , double_vector)") +PcaPlotData.cNamespace().free = cwrapper.prototype("void pca_plot_data_free(pca_plot_data)") + +PcaPlotData.cNamespace().component_count = cwrapper.prototype("int pca_plot_data_get_size(pca_plot_data)") +PcaPlotData.cNamespace().realization_count = cwrapper.prototype("int pca_plot_data_get_ens_size(pca_plot_data)") +PcaPlotData.cNamespace().get = cwrapper.prototype("pca_plot_vector_ref pca_plot_data_iget_vector(pca_plot_data, int)") +PcaPlotData.cNamespace().get_name = cwrapper.prototype("char* pca_plot_data_get_name(pca_plot_data)") +PcaPlotData.cNamespace().get_singular_values = cwrapper.prototype("double_vector_ref pca_plot_data_get_singular_values(pca_plot_data)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_vector.py new file mode 100644 index 0000000000..ead9b62696 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/pca_plot_vector.py @@ -0,0 +1,62 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.util import Matrix + + +class PcaPlotVector(BaseCClass): + + def __init__(self, component, principal_component_matrix, observation_principal_component_matrix): + assert isinstance(component, int) + assert isinstance(principal_component_matrix, Matrix) + assert isinstance(observation_principal_component_matrix, Matrix) + + c_pointer = PcaPlotVector.cNamespace().alloc(component, principal_component_matrix, observation_principal_component_matrix) + super(PcaPlotVector, self).__init__(c_pointer) + + + def __len__(self): + """ @rtype: int """ + return PcaPlotVector.cNamespace().size(self) + + + def __getitem__(self, index): + """ + @type index: int + @rtype: float + """ + assert isinstance(index, int) + return PcaPlotVector.cNamespace().get(self, index) + + def __iter__(self): + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + def getObservation(self): + """ @rtype: float """ + return PcaPlotVector.cNamespace().get_obs(self) + + def getSingularValue(self): + """ @rtype: float """ + return PcaPlotVector.cNamespace().get_singular_value(self) + + + def free(self): + PcaPlotVector.cNamespace().free(self) + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerType("pca_plot_vector", PcaPlotVector) +cwrapper.registerType("pca_plot_vector_obj", PcaPlotVector.createPythonObject) +cwrapper.registerType("pca_plot_vector_ref", PcaPlotVector.createCReference) + +PcaPlotVector.cNamespace().alloc = cwrapper.prototype("c_void_p pca_plot_vector_alloc(int, matrix, matrix)") +PcaPlotVector.cNamespace().free = cwrapper.prototype("void pca_plot_vector_free(pca_plot_vector)") +PcaPlotVector.cNamespace().size = cwrapper.prototype("int pca_plot_vector_get_size(pca_plot_vector)") +PcaPlotVector.cNamespace().get = cwrapper.prototype("double pca_plot_vector_iget_sim_value(pca_plot_vector, int)") +PcaPlotVector.cNamespace().get_obs = cwrapper.prototype("double pca_plot_vector_get_obs_value(pca_plot_vector)") +PcaPlotVector.cNamespace().get_singular_value = cwrapper.prototype("double pca_plot_vector_get_singular_value(pca_plot_vector)") + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data.py new file mode 100644 index 0000000000..1e270aa954 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data.py @@ -0,0 +1,44 @@ +from ert.enkf.plot_data import PlotBlockVector +from ert.util import DoubleVector + + +class PlotBlockData(object): + + def __init__(self, depth_vector): + """ + @type depth_vector: DoubleVector + """ + assert isinstance(depth_vector, DoubleVector) + self.__depth_vector = depth_vector + self.__plot_block_vectors = {} + + + def __len__(self): + """ @rtype: int """ + return len(self.__plot_block_vectors) + + + def __getitem__(self, index): + """ + @type index: int + @rtype: PlotBlockVector + """ + return self.__plot_block_vectors[index] + + def __iter__(self): + cur = 0 + keys = sorted(self.__plot_block_vectors.keys()) + while cur < len(keys): + yield self[keys[cur]] + cur += 1 + + def getDepth(self): + """ @rtype: DoubleVector """ + return self.__depth_vector + + + def addPlotBlockVector(self, vector): + """ + @type vector: PlotBlockVector + """ + self.__plot_block_vectors[vector.getRealizationNumber()] = vector diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data_loader.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data_loader.py new file mode 100644 index 0000000000..5103226c27 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_data_loader.py @@ -0,0 +1,98 @@ +from ert.enkf import EnkfStateType, RealizationStateEnum, EnkfNode, ErtImplType, NodeId +from ert.enkf.plot_data import PlotBlockData, PlotBlockVector +from ert.util import DoubleVector, BoolVector, ThreadPool + + +class PlotBlockDataLoader(object): + + def __init__(self, obs_vector): + """ + @type obs_vector: ObsVector + """ + super(PlotBlockDataLoader, self).__init__() + self.__obs_vector = obs_vector + self.__permutation_vector = None + + + def getBlockObservation(self, report_step): + """ @rtype: BlockObservation """ + return self.__obs_vector.getNode(report_step) + + + def getDepthValues(self, report_step): + """ @rtype: DoubleVector """ + block_obs = self.getBlockObservation(report_step) + + depth = DoubleVector() + for index in block_obs: + value = block_obs.getDepth(index) + depth.append(value) + + return depth + + + def load(self, fs, report_step, state=EnkfStateType.FORECAST, input_mask=None): + """ + @type fs: EnkfFs + @type report_step: int + @type state: EnkfStateType + @type input_mask: BoolVector + @rtype: PlotBlockData + """ + + state_map = fs.getStateMap() + ensemble_size = len(state_map) + + if not input_mask is None: + mask = BoolVector.copy(input_mask) + else: + mask = BoolVector(False, ensemble_size) + + state_map.selectMatching(mask, RealizationStateEnum.STATE_HAS_DATA) + + depth = self.getDepthValues(report_step) + + self.__permutation_vector = depth.permutationSort() + depth.permute(self.__permutation_vector) + + plot_block_data = PlotBlockData(depth) + + thread_pool = ThreadPool() + for index in range(ensemble_size): + if mask[index]: + thread_pool.addTask(self.loadVector, plot_block_data, fs, report_step, index, state) + + thread_pool.nonBlockingStart() + thread_pool.join() + + return plot_block_data + + + def loadVector(self, plot_block_data, fs, report_step, realization_number, state=EnkfStateType.FORECAST): + """ + @type plot_block_data: PlotBlockData + @type fs: EnkfFs + @type report_step: int + @type realization_number: int + @type state: EnkfStateType + @rtype PlotBlockVector + """ + config_node = self.__obs_vector.getConfigNode() + + is_private_container = config_node.getImplementationType() == ErtImplType.CONTAINER + data_node = EnkfNode(config_node, private=is_private_container) + + node_id = NodeId(report_step, realization_number, state) + + if data_node.tryLoad(fs, node_id): + block_obs = self.getBlockObservation(report_step) + + data = DoubleVector() + for index in range(len(block_obs)): + value = block_obs.getData(data_node.valuePointer(), index, node_id) + data.append(value) + data.permute(self.__permutation_vector) + + plot_block_vector = PlotBlockVector(realization_number, data) + plot_block_data.addPlotBlockVector(plot_block_vector) + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_vector.py b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_vector.py new file mode 100644 index 0000000000..855bdbb8a1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/plot_data/plot_block_vector.py @@ -0,0 +1,39 @@ +from ert.util import DoubleVector + + +class PlotBlockVector(object): + def __init__(self, realization_number, data): + """ + @type realization_number: int + @type data: DoubleVector + """ + super(PlotBlockVector, self).__init__() + + assert isinstance(data, DoubleVector) + + self.__realization_number = realization_number + self.__data = data + + def __len__(self): + """ @rtype: int """ + return len(self.__data) + + + def __getitem__(self, index): + """ @rtype: float """ + assert isinstance(index, int) + return self.__data[index] + + + def __iter__(self): + """ @rtype: float """ + cur = 0 + while cur < len(self): + yield self[cur] + cur += 1 + + + def getRealizationNumber(self): + """ @rtype: int """ + return self.__realization_number + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/post_simulation_hook.py b/ThirdParty/Ert/devel/python/python/ert/enkf/post_simulation_hook.py new file mode 100644 index 0000000000..daa18e082d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/post_simulation_hook.py @@ -0,0 +1,36 @@ +import os +import sys +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB +from ert.job_queue import Workflow + + +class PostSimulationHook(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def hasWorkflow(self): + """ @rtype: bool """ + return PostSimulationHook.cNamespace().has_workflow(self) + + def getWorkflow(self): + """ @rtype: Workflow """ + return PostSimulationHook.cNamespace().get_workflow(self) + + def checkRunpathListFile(self): + """ @rtype: bool """ + runpath_list_file = PostSimulationHook.cNamespace().get_runpath_list_file(self) + + if not os.path.exists(runpath_list_file): + sys.stderr.write("** Warning: the file: %s with a list of runpath directories was not found - QC workflow wil probably fail.\n" % runpath_list_file) + + +cwrapper = CWrapper(ENKF_LIB) + +cwrapper.registerObjectType("qc_module", PostSimulationHook) + +PostSimulationHook.cNamespace().has_workflow = cwrapper.prototype("bool qc_module_has_workflow(qc_module)") +PostSimulationHook.cNamespace().get_workflow = cwrapper.prototype("workflow_ref qc_module_get_workflow(qc_module)") +PostSimulationHook.cNamespace().get_runpath_list_file = cwrapper.prototype("char* qc_module_get_runpath_list_file(qc_module)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/state_map.py b/ThirdParty/Ert/devel/python/python/ert/enkf/state_map.py index acea16e614..f4422d727c 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/state_map.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/state_map.py @@ -16,12 +16,16 @@ from ert.cwrap import BaseCClass, CWrapper from ert.enkf import ENKF_LIB from ert.enkf.enums import RealizationStateEnum +from ert.util import BoolVector class StateMap(BaseCClass): - def __init__(self): + def __init__(self , filename = None): c_ptr = StateMap.cNamespace().alloc() super(StateMap, self).__init__(c_ptr) + if filename: + self.load(filename) + def __len__(self): """ @rtype: int """ @@ -35,6 +39,10 @@ def __iter__(self): yield self[index] index += 1 + def __eq__(self , other): + return self.cNamespace().equal(self, other) + + def __getitem__(self, index): """ @rtype: RealizationStateEnum """ if not isinstance(index, int): @@ -76,20 +84,44 @@ def isReadOnly(self): """ @rtype: bool """ return StateMap.cNamespace().is_read_only(self) + def selectMatching(self, select_target, select_mask): + """ + @type select_target: BoolVector + @type select_mask: RealizationStateEnum + """ + assert isinstance(select_target, BoolVector) + assert isinstance(select_mask, RealizationStateEnum) + + StateMap.cNamespace().select_matching(self, select_target, select_mask) + def free(self): StateMap.cNamespace().free(self) + + def load(self,filename): + if not self.cNamespace().fread( self , filename): + raise IOError("Failed to load state map from:%s" % filename) + + + def save(self,filename): + self.cNamespace().fwrite( self , filename) + + cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("state_map", StateMap) -cwrapper.registerType("state_map_obj", StateMap.createPythonObject) -cwrapper.registerType("state_map_ref", StateMap.createCReference) - -StateMap.cNamespace().alloc = cwrapper.prototype("c_void_p state_map_alloc()") -StateMap.cNamespace().free = cwrapper.prototype("void state_map_free(state_map)") -StateMap.cNamespace().size = cwrapper.prototype("int state_map_get_size(state_map)") -StateMap.cNamespace().iget = cwrapper.prototype("realisation_state_enum state_map_iget(state_map, int)") -StateMap.cNamespace().iset = cwrapper.prototype("void state_map_iset(state_map, int, realisation_state_enum)") -StateMap.cNamespace().is_read_only = cwrapper.prototype("bool state_map_is_readonly(state_map)") +cwrapper.registerObjectType("state_map", StateMap) + +StateMap.cNamespace().alloc = cwrapper.prototype("c_void_p state_map_alloc()") +StateMap.cNamespace().fread = cwrapper.prototype("bool state_map_fread(state_map , char*)") +StateMap.cNamespace().fwrite = cwrapper.prototype("void state_map_fwrite(state_map , char*)") +StateMap.cNamespace().equal = cwrapper.prototype("bool state_map_equal(state_map , state_map)") +StateMap.cNamespace().free = cwrapper.prototype("void state_map_free(state_map)") +StateMap.cNamespace().size = cwrapper.prototype("int state_map_get_size(state_map)") +StateMap.cNamespace().iget = cwrapper.prototype("realisation_state_enum state_map_iget(state_map, int)") +StateMap.cNamespace().iset = cwrapper.prototype("void state_map_iset(state_map, int, realisation_state_enum)") +StateMap.cNamespace().select_matching = cwrapper.prototype("void state_map_select_matching(state_map, bool_vector, realisation_state_enum)") +StateMap.cNamespace().is_read_only = cwrapper.prototype("bool state_map_is_readonly(state_map)") StateMap.cNamespace().is_legal_transition = cwrapper.prototype("bool state_map_legal_transition(realisation_state_enum, realisation_state_enum)") + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/util/time_map.py b/ThirdParty/Ert/devel/python/python/ert/enkf/util/time_map.py index 9e2ea3a966..9363392914 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/util/time_map.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/util/time_map.py @@ -13,23 +13,139 @@ # # See the GNU General Public License at # for more details. +import os +import errno + from ert.cwrap import CWrapper, BaseCClass from ert.enkf import ENKF_LIB +from ert.util import CTime class TimeMap(BaseCClass): - def __init__(self): - raise NotImplementedError("Class can not be instantiated directly!") + def __init__(self, filename = None): + c_ptr = TimeMap.cNamespace().alloc() + super(TimeMap, self).__init__(c_ptr) + if filename: + self.load(filename) + + + def load(self, filename): + if os.path.isfile( filename ): + TimeMap.cNamespace().load(self , filename) + else: + raise IOError(( errno.ENOENT , "File not found: %s" % filename)) + + + def fload(self , filename): + """ + Will load a timemap as a formatted file consisting of a list of dates: DD/MM/YYYY + """ + if os.path.isfile( filename ): + OK = TimeMap.cNamespace().fload(self , filename) + if not OK: + raise Exception("Error occured when loading timemap from:%s" % filename) + else: + raise IOError(( errno.ENOENT , "File not found: %s" % filename)) + + + + def isStrict(self): + return TimeMap.cNamespace().is_strict( self ) + + + def setStrict(self , strict): + return TimeMap.cNamespace().set_strict( self , strict) + + + def getSimulationDays(self, step): + """ @rtype: double """ + if not isinstance(step, int): + raise TypeError("Expected an integer") + + size = len(self) + if step < 0 or step >= size: + raise IndexError("Index out of range: 0 <= %d < %d" % (step, size)) - def iget_sim_days(self, step): return TimeMap.cNamespace().iget_sim_days(self, step) - def iget(self, step): - return TimeMap.cNamespace().iget(self, step) + + def __getitem__(self, index): + """ @rtype: CTime """ + if not isinstance(index, int): + raise TypeError("Expected an integer") + + size = len(self) + if index < 0 or index >= size: + raise IndexError("Index out of range: 0 <= %d < %d" % (index, size)) + + return TimeMap.cNamespace().iget(self, index) + + def __setitem__(self , index , time): + self.update( index , time ) + + + def update(self , index , time): + if TimeMap.cNamespace().try_update(self , index , CTime(time)): + return True + else: + if self.isStrict(): + raise Exception("Tried to update with inconsistent value") + else: + return False + + + + def __iter__(self): + cur = 0 + + while cur < len(self): + yield self[cur] + cur += 1 + + def __contains__(self , time): + index = TimeMap.cNamespace().lookup_time(self , CTime(time)) + if index >= 0: + return True + else: + return False + + + def lookupTime(self , time): + index = TimeMap.cNamespace().lookup_time(self , CTime(time)) + if index >= 0: + return index + else: + raise ValueError("The time:%s was not found in the time_map instance" % time) + + + def lookupDays(self , days): + index = TimeMap.cNamespace().lookup_days(self , days) + if index >= 0: + return index + else: + raise ValueError("The days: %s was not found in the time_map instance" % days) + + + def __len__(self): + """ @rtype: int """ + return TimeMap.cNamespace().size(self) def free(self): TimeMap.cNamespace().free(self) + + def dump(self): + """ + Will return a list of tuples (step , CTime , days). + """ + step_list = [] + for step,t in enumerate(self): + step_list.append( (step , t , self.getSimulationDays( step )) ) + return step_list + + + + ################################################################## cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("time_map", TimeMap) @@ -41,5 +157,15 @@ def free(self): ################################################################## TimeMap.cNamespace().free = cwrapper.prototype("void time_map_free( time_map )") +TimeMap.cNamespace().fread_alloc_readonly = cwrapper.prototype("c_void_p time_map_fread_alloc_readonly(char*)") +TimeMap.cNamespace().alloc = cwrapper.prototype("c_void_p time_map_alloc()") +TimeMap.cNamespace().load = cwrapper.prototype("bool time_map_fread(time_map , char*)") +TimeMap.cNamespace().fload = cwrapper.prototype("bool time_map_fscanf(time_map , char*)") TimeMap.cNamespace().iget_sim_days = cwrapper.prototype("double time_map_iget_sim_days(time_map, int)") -TimeMap.cNamespace().iget = cwrapper.prototype("int time_map_iget(time_map, int)") +TimeMap.cNamespace().iget = cwrapper.prototype("time_t time_map_iget(time_map, int)") +TimeMap.cNamespace().size = cwrapper.prototype("int time_map_get_size(time_map)") +TimeMap.cNamespace().try_update = cwrapper.prototype("bool time_map_try_update(time_map , int , time_t)") +TimeMap.cNamespace().is_strict = cwrapper.prototype("bool time_map_is_strict( time_map )") +TimeMap.cNamespace().set_strict = cwrapper.prototype("void time_map_set_strict( time_map , bool)") +TimeMap.cNamespace().lookup_time = cwrapper.prototype("int time_map_lookup_time( time_map , time_t)") +TimeMap.cNamespace().lookup_days = cwrapper.prototype("int time_map_lookup_days( time_map , double)") diff --git a/ThirdParty/Ert/devel/python/python/ert/geo/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/geo/CMakeLists.txt index e991e0eb3d..16d6dba465 100644 --- a/ThirdParty/Ert/devel/python/python/ert/geo/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/geo/CMakeLists.txt @@ -1,6 +1,9 @@ set(PYTHON_SOURCES __init__.py geo_polygon.py + geometry_tools.py + polyline.py + xyz_io.py ) add_python_package("python.ert.geo" ${PYTHON_INSTALL_PREFIX}/ert/geo "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/geo/__init__.py b/ThirdParty/Ert/devel/python/python/ert/geo/__init__.py index 133eca3906..3501dbf962 100644 --- a/ThirdParty/Ert/devel/python/python/ert/geo/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/geo/__init__.py @@ -21,7 +21,10 @@ import ert.util -ERT_GEOMETRY_LIB = clib.ert_load("libert_geometry.so") +ERT_GEOMETRY_LIB = clib.ert_load("libert_geometry") from .geo_polygon import GeoPolygon +from .polyline import Polyline +from .xyz_io import XYZIo +from .geometry_tools import GeometryTools diff --git a/ThirdParty/Ert/devel/python/python/ert/geo/geometry_tools.py b/ThirdParty/Ert/devel/python/python/ert/geo/geometry_tools.py new file mode 100644 index 0000000000..3feb25ce3c --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/geo/geometry_tools.py @@ -0,0 +1,265 @@ +from math import sqrt + + +class GeometryTools(object): + EPSILON = 0.000001 + + @staticmethod + def lineIntersection(p1, p2, p3, p4): + """ + Finds intersection between line segments. Returns None if no intersection found. + Algorithm provided by Paul Bourke + + @type p1: tuple of (float, float) + @type p2: tuple of (float, float) + @type p3: tuple of (float, float) + @type p4: tuple of (float, float) + @rtype: tuple of (float, float) + """ + + denominator = (p4[1] - p3[1]) * (p2[0] - p1[0]) - (p4[0] - p3[0]) * (p2[1] - p1[1]) + numerator_a = (p4[0] - p3[0]) * (p1[1] - p3[1]) - (p4[1] - p3[1]) * (p1[0] - p3[0]) + numerator_b = (p2[0] - p1[0]) * (p1[1] - p3[1]) - (p2[1] - p1[1]) * (p1[0] - p3[0]) + + # coincident? + if abs(numerator_a) < GeometryTools.EPSILON and abs(numerator_b) < GeometryTools.EPSILON and abs(denominator) < GeometryTools.EPSILON: + x = (p1[0] + p2[0]) / 2.0 + y = (p1[1] + p2[1]) / 2.0 + return x, y + + # parallel? + if abs(denominator) < GeometryTools.EPSILON: + return None + + + # intersection along the segments? + mua = numerator_a / denominator + mub = numerator_b / denominator + + if mua < 0.0 or mua > 1.0 or mub < 0.0 or mub > 1.0: + return None + + x = p1[0] + mua * (p2[0] - p1[0]) + y = p1[1] + mua * (p2[1] - p1[1]) + return x, y + + @staticmethod + def polylinesIntersect(polyline1 , polyline2): + """Test if the polylines polyline1 and polyline2 intersect. + + The input arguments must be either Polyline instances[1], or a + list of (float,float) tuples. The method performs a super + naive n^2 check and should not be used for large polyline objects. + + @type polyline1: Polyline or list of tuple of (float, float) + @type polyline2: Polyline or list of tuple of (float, float) + + [1]: The z - coordinate will be ignored. + + """ + + for index1 in range(len(polyline1) - 1): + p1 = polyline1[index1] + p2 = polyline1[index1 + 1] + for index2 in range(len(polyline2) - 1): + p3 = polyline2[index2] + p4 = polyline2[index2 + 1] + + if GeometryTools.lineIntersection(p1,p2,p3,p4): + return True + + return False + + + + + @staticmethod + def ccw(p1, p2, p3): + """ + Three points are a counter-clockwise turn if ccw > 0, clockwise if + ccw < 0, and collinear if ccw = 0 because ccw is a determinant that + gives the signed area of the triangle formed by p1, p2 and p3. + + @type p1: tuple of (float, float) + @type p2: tuple of (float, float) + @type p3: tuple of (float, float) + @rtype: float + """ + return (p2[0] - p1[0]) * (p3[1] - p1[1]) - (p2[1] - p1[1]) * (p3[0] - p1[0]) + + + @staticmethod + def convexHull(points): + """ + Given a list of points finds the convex hull + @type points: list of tuple of (float, float) + @rtype: list of tuple of (float, float) + """ + points = sorted(points) + + def keepLeft(hull, r): + while len(hull) > 1 and GeometryTools.ccw(hull[-2], hull[-1], r) > 0: + hull.pop() + + if len(hull) == 0 or hull[-1] != r: + hull.append(r) + + return hull + + l = reduce(keepLeft, points, []) + u = reduce(keepLeft, reversed(points), []) + l.extend([u[i] for i in xrange(1, len(u) - 1)]) + + return l + + + @staticmethod + def pointInPolygon(p, polygon): + """ + Finds out if a point is inside a polygon or not + @type p: tuple of (float, float) + @type polygon: Polyline or list of tuple of (float, float) + @rtype: bool + """ + x = p[0] + y = p[1] + n = len(polygon) + + inside = False + + p1x, p1y = polygon[0][0:2] + for index in range(n + 1): + p2x, p2y = polygon[index % n][0:2] + + if min(p1y, p2y) < y <= max(p1y, p2y): + if x <= max(p1x, p2x): + if p1y != p2y: + xints = (y - p1y) * (p2x - p1x) / (p2y - p1y) + p1x + + if p1x == p2x or x <= xints: + inside = not inside + + p1x, p1y = p2x, p2y + + return inside + + + + + @staticmethod + def slicePolygon(bounding_polygon, poly_line): + """ + This algorithm extends the end-points of the line and find intersections between the line + and the enclosing polygon. The result is a polygon sliced by the extended line. + + The enclosing polygon must be convex, closed and completely enclose the line. + + @type bounding_polygon: Polyline or list of tuple of (float, float) + @type poly_line: Polyline or list of tuple of (float, float) + @rtype: list of tuple of (float, float) + """ + + p1 = poly_line[0] + ray1 = GeometryTools.lineToRay(poly_line[1], poly_line[0]) + intersection1 = GeometryTools.rayPolygonIntersections(p1, ray1, bounding_polygon)[0] # assume convex + + p2 = poly_line[-1] + ray2 = GeometryTools.lineToRay(poly_line[-2], poly_line[-1]) + intersection2 = GeometryTools.rayPolygonIntersections(p2, ray2, bounding_polygon)[0] # assume convex + + + if intersection2[0] < intersection1[0]: + intersection1, intersection2 = intersection2, intersection1 + poly_line = list(reversed(poly_line)) + + result = [intersection1[1]] + + for index in range(intersection1[0] + 1, intersection2[0] + 1): + result.append(bounding_polygon[index]) + + result.append(intersection2[1]) + + for point in reversed(poly_line): + result.append(point) + + result.append(intersection1[1]) + + return result + + + + @staticmethod + def lineToRay(p0, p1): + """ + Converts a line segment to a unit vector starting at p0 pointing towards p1. + @type p0: tuple of (float, float) + @type p1: tuple of (float, float) + @rtype: tuple of (float, float) + """ + + x = p1[0] - p0[0] + y = p1[1] - p0[1] + + length = sqrt(x * x + y * y) + + return x / length, y / length + + + @staticmethod + def rayLineIntersection(point, ray, p1, p2): + """ + Finds the intersection between the ray starting at point and the line [p1, p2]. + @type point: tuple of (float, float) + @type ray: tuple of (float, float) + @type p1: tuple of (float, float) + @type p2: tuple of (float, float) + @rtype: tuple of (float, float) or None + """ + denominator = ray[1] * (p2[0] - p1[0]) - ray[0] * (p2[1] - p1[1]) + numerator_a = ray[0] * (p1[1] - point[1]) - ray[1] * (p1[0] - point[0]) + numerator_b = (p2[0] - p1[0]) * (p1[1] - point[1]) - (p2[1] - p1[1]) * (p1[0] - point[0]) + + # coincident? + if abs(numerator_a) < GeometryTools.EPSILON and abs(numerator_b) < GeometryTools.EPSILON and abs(denominator) < GeometryTools.EPSILON: + x = (p1[0] + p2[0]) / 2.0 + y = (p1[1] + p2[1]) / 2.0 + return x, y + + # parallel? + if abs(denominator) < GeometryTools.EPSILON: + return None + + + # intersection along the segments? + mua = numerator_a / denominator + mub = numerator_b / denominator + + # for rays mub can be larger than 1.0 + if mua < 0.0 or mua > 1.0 or mub < 0.0: + return None + + x = p1[0] + mua * (p2[0] - p1[0]) + y = p1[1] + mua * (p2[1] - p1[1]) + return x, y + + @staticmethod + def rayPolygonIntersections(point, ray, polygon): + """ + Finds all intersections along the ray with the polygon. + The returned value is a tuple containing the line segment in the polygon and the intersection coordinate. + + @type point: tuple of (float, float) + @type ray: tuple of (float, float) + @type polygon: Polyline or [tuple of (float, float)] + @rtype: list of tuple of (int, tuple of (float, float)) + """ + results = [] + for index in range(len(polygon) - 1): + lp1 = polygon[index] + lp2 = polygon[index + 1] + + intersection = GeometryTools.rayLineIntersection(point, ray, lp1, lp2) + if intersection is not None: + results.append((index, intersection)) + + return results diff --git a/ThirdParty/Ert/devel/python/python/ert/geo/polyline.py b/ThirdParty/Ert/devel/python/python/ert/geo/polyline.py new file mode 100644 index 0000000000..e1ddac9375 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/geo/polyline.py @@ -0,0 +1,132 @@ +import collections +from .geometry_tools import GeometryTools + +class Polyline(object): + def __init__(self, name="Unnamed" , init_points = None): + super(Polyline, self).__init__() + self.__name = name + self.__points = [] + if init_points: + self.loadPoints( init_points ) + + def __str__(self): + s = "Polyline:[ " + for p in self: + s += "(%s,%s) " % (p[0],p[1]) + s += "]" + return s + + def name(self): + """ @rtype: str """ + return self.__name + + + def __eq__(self, other): + if len(self) != len(other): + return False + + for (p1,p2) in zip(self , other): + if p1 != p2: + return False + + return True + + + + def __len__(self): + return len(self.__points) + + def addPoint(self, x, y, z=None): + if z is None: + p = (x, y) + else: + p = (x, y, z) + self.__points.append(p) + + def __getitem__(self, index): + """ @rtype: tuple of (float, float, float) """ + if index < 0: + index += len(self) + + if not 0 <= index < len(self): + raise IndexError("Index:%d invalid must be in range: [0, %d]" % (index, (len(self) - 1))) + return self.__points[index] + + def isClosed(self): + first = self[0] + last = self[-1] + + return first == last + + + def assertClosed(self): + if not self.isClosed(): + first_point = self[0] + + x = first_point[0] + y = first_point[1] + try: + z = first_point[2] + self.addPoint(x,y,z) + except IndexError: + self.addPoint(x,y) + + + + + + def loadPoints(self , points): + if not isinstance( points , collections.Iterable ): + raise TypeError("The input argument points must be iterable") + + for point in points: + x = point[0] + y = point[1] + try: + z = point[2] + except IndexError: + z = None + + self.addPoint(x,y,z) + + def intersects(self, other_polyline): + """ + Test if instances intersects with other polyline. + + @type other_polyline: Polyline or list of tuple of (float, float) + @rtype: bool + """ + return GeometryTools.polylinesIntersect( self , other_polyline ) + + + def __iter__(self): + index = 0 + + while index < len(self): + yield self[index] + index += 1 + + + + def unzip(self): + first_point = self[0] + x = [] + y = [] + + try: + z = first_point[2] + z = [] + for p in self: + x.append(p[0]) + y.append(p[1]) + z.append(p[2]) + + return (x,y,z) + except IndexError: + for p in self: + x.append(p[0]) + y.append(p[1]) + + return (x,y) + + diff --git a/ThirdParty/Ert/devel/python/python/ert/geo/xyz_io.py b/ThirdParty/Ert/devel/python/python/ert/geo/xyz_io.py new file mode 100644 index 0000000000..db394d7bed --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/geo/xyz_io.py @@ -0,0 +1,62 @@ +import os +from .polyline import Polyline + +class XYZIo(object): + + @staticmethod + def readXYZFile(path): + """ @rtype: Polyline """ + + if not os.path.exists(path): + raise ValueError("Path does not exist '%s'!" % path) + + name = os.path.basename(path) + + polyline = Polyline(name=name) + + with open(path, "r") as f: + for line in f: + line = line.strip() + if line: + x, y, z = map(float, line.split()) + + if x != 999.000000 and y != 999.000000 and z != 999.000000: + polyline.addPoint(x, y, z) + else: + break + else: + break + + return polyline + + + @staticmethod + def readXYFile(path): + """ @rtype: Polyline """ + + if not os.path.exists(path): + raise ValueError("Path does not exist '%s'!" % path) + + name = os.path.basename(path) + + polyline = Polyline(name=name) + + with open(path, "r") as f: + for line in f: + x, y= map(float, line.split()) + polyline.addPoint(x, y) + + return polyline + + + @staticmethod + def saveXYFile(polyline , filename): + """ + @type polyline: Polyline or list of tuple of (float, float) + """ + with open(filename , "w") as fileH: + for p in polyline: + fileH.write("%g %g\n" % (p[0] , p[1])) + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt index a6424e679b..0a46bdafeb 100644 --- a/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt @@ -1,12 +1,19 @@ set(PYTHON_SOURCES __init__.py driver.py + ert_script.py ext_job.py ext_joblist.py + external_ert_script.py forward_model.py + function_ert_script.py job.py job_status_type_enum.py queue.py + workflow.py + workflow_job.py + workflow_joblist.py + workflow_runner.py ) add_python_package("python.ert.job_queue" ${PYTHON_INSTALL_PREFIX}/ert/job_queue "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py index 11a1b66d2e..cff0c2d0bc 100644 --- a/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py @@ -71,7 +71,7 @@ def setenv( var, value): setenv("LSF_SERVERDIR", "%s/etc" % LSF_HOME) setenv("LSF_ENVDIR", "%s/conf" % LSF_HOME) # This is wrong: Statoil: /prog/LSF/conf -JOB_QUEUE_LIB = clib.ert_load("libjob_queue.so") +JOB_QUEUE_LIB = clib.ert_load("libjob_queue") from .job_status_type_enum import JobStatusType from .job import Job @@ -80,3 +80,12 @@ def setenv( var, value): from .ext_job import ExtJob from .ext_joblist import ExtJoblist from .forward_model import ForwardModel + +from .ert_script import ErtScript +from .function_ert_script import FunctionErtScript +from .external_ert_script import ExternalErtScript + +from .workflow_job import WorkflowJob +from .workflow_joblist import WorkflowJoblist +from .workflow import Workflow +from .workflow_runner import WorkflowRunner diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/ert_script.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/ert_script.py new file mode 100644 index 0000000000..5f339c1478 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/ert_script.py @@ -0,0 +1,83 @@ +import inspect +import imp +import sys +import traceback + +class ErtScript(object): + + def __init__(self, ert): + """ + @type ert: EnKFMain + """ + super(ErtScript, self).__init__() + + if not hasattr(self, "run"): + raise UserWarning("ErtScript implementations must provide a method run(self, ert, ...)") + + self.__verbose = False + self.__ert = ert + + self.__is_cancelled = False + + def isVerbose(self): + return self.__verbose + + def ert(self): + """ @rtype: EnKFMain """ + return self.__ert + + def isCancelled(self): + """ @rtype: bool """ + return self.__is_cancelled + + def cancel(self): + self.__is_cancelled = True + + def initializeAndRun(self, argument_types, argument_values, verbose=False): + """ + @type argument_types: list of type + @type argument_values: list of string + @type verbose: bool + @rtype: unknown + """ + self.__verbose = verbose + + arguments = [] + + + for index, arg_value in enumerate(argument_values): + if index < len(argument_types): + arg_type = argument_types[index] + else: + arg_type = str + + arguments.append(arg_type(arg_value)) + + return self.run(*arguments) + + __module_count = 0 # Need to have unique modules in case of identical object naming in scripts + + @staticmethod + def loadScriptFromFile(path): + """ @rtype: type ErtScript """ + try: + m = imp.load_source("ErtScriptModule_%d" % ErtScript.__module_count, path) + ErtScript.__module_count += 1 + return ErtScript.__findErtScriptImplementations(m) + except Exception as e: + sys.stderr.write("The script '%s' caused an error during load:\n" % path) + traceback.print_exception(sys.exc_type, sys.exc_value, None) + return None + + @staticmethod + def __findErtScriptImplementations(module): + """ @rtype: ErtScript """ + result = [] + for name, obj in inspect.getmembers(module): + if hasattr(obj, "__bases__") and ErtScript in obj.__bases__: + result.append(obj) + + if len(result) != 1: + raise UserWarning("Must have (only) one implementation of ErtScript in a module!") + + return result[0] \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/external_ert_script.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/external_ert_script.py new file mode 100644 index 0000000000..6757115868 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/external_ert_script.py @@ -0,0 +1,25 @@ +from subprocess import Popen +from ert.job_queue import ErtScript + + +class ExternalErtScript(ErtScript): + + def __init__(self, ert, executable): + super(ExternalErtScript, self).__init__(ert) + + self.__executable = executable + self.__job = None + + def run(self, *args): + command = [self.__executable] + command.extend([str(arg) for arg in args]) + self.__job = Popen(command) + self.__job.wait() # This should not be here? + return None + + def cancel(self): + super(ExternalErtScript, self).cancel() + if self.__job is not None: + self.__job.terminate() + + self.__job.kill() diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/function_ert_script.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/function_ert_script.py new file mode 100644 index 0000000000..65d7076a38 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/function_ert_script.py @@ -0,0 +1,58 @@ +from ert.cwrap import clib, CWrapper +from ert.job_queue import ErtScript +from ert.util.stringlist import StringList + + +class FunctionErtScript(ErtScript): + + def __init__(self, ert, function_name, argument_types, argument_count): + super(FunctionErtScript, self).__init__(ert) + + lib = clib.ert_load(None) + wrapper = CWrapper(lib) + + parsed_argument_types = [] + + if ert is not None: + self.__function = wrapper.prototype("c_void_p %s(c_void_p, stringlist)" % function_name) + + else: + for arg in argument_types: + if arg is bool: + parsed_argument_types.append("bool") + elif arg is str: + parsed_argument_types.append("char*") + elif arg is int: + parsed_argument_types.append("int") + elif arg is float: + parsed_argument_types.append("float") + else: + raise TypeError("Unknown type: %s" % arg) + + self.__function = wrapper.prototype("c_void_p %s(%s)" % (function_name, ", ".join(parsed_argument_types[:argument_count]))) + + + def run(self, *args): + ert = self.ert() + if ert is None: + # This is usually used for testing purposes without an ert instance + return self.__function(*args) + else: + str_args = StringList() + for arg in args: + str_args.append(arg) + + if hasattr(ert, "from_param"): + pointer = ert.from_param(ert) + else: + pointer = ert # ... + + return self.__function(pointer, str_args) + + def cancel(self): + # job is not cancellable and will just ignore the call + pass + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/queue.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/queue.py index 1f9a64282a..efed10d231 100644 --- a/ThirdParty/Ert/devel/python/python/ert/job_queue/queue.py +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/queue.py @@ -300,7 +300,7 @@ def getJobStatus(self, job_number): JobQueue.cNamespace().is_running = cwrapper.prototype("int job_queue_is_running( job_queue )") JobQueue.cNamespace().submit_complete = cwrapper.prototype("void job_queue_submit_complete( job_queue )") JobQueue.cNamespace().get_job_ptr = cwrapper.prototype("c_void_p job_queue_iget_job( job_queue , int)") #warn fix return type -JobQueue.cNamespace().iget_sim_start = cwrapper.prototype("int job_queue_iget_sim_start( job_queue , int)") +JobQueue.cNamespace().iget_sim_start = cwrapper.prototype("time_t job_queue_iget_sim_start( job_queue , int)") JobQueue.cNamespace().get_active_size = cwrapper.prototype("int job_queue_get_active_size( job_queue )") JobQueue.cNamespace().get_pause = cwrapper.prototype("bool job_queue_get_pause(job_queue)") JobQueue.cNamespace().set_pause_on = cwrapper.prototype("void job_queue_set_pause_on(job_queue)") diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow.py new file mode 100644 index 0000000000..98fe8feead --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow.py @@ -0,0 +1,102 @@ +import time +from ert.config import ConfigError +from ert.cwrap import BaseCClass, CWrapper +from ert.job_queue import JOB_QUEUE_LIB, WorkflowJoblist, WorkflowJob +from ert.util import SubstitutionList + +class Workflow(BaseCClass): + + def __init__(self, src_file, job_list): + """ + @type src_file: str + @type job_list: WorkflowJoblist + """ + c_ptr = Workflow.cNamespace().alloc(src_file, job_list) + super(Workflow, self).__init__(c_ptr) + + self.__running = False + self.__cancelled = False + self.__current_job = None + + def __len__(self): + return Workflow.cNamespace().count(self) + + def __getitem__(self, index): + """ + @type index: int + @rtype: tuple of (WorkflowJob, arguments) + """ + job = Workflow.cNamespace().iget_job(self, index) + args = Workflow.cNamespace().iget_args(self, index) + return job, args + + def __iter__(self): + for index in range(len(self)): + yield self[index] + + def run(self, ert, verbose=False, context=None): + """ + @type ert: ert.enkf.enkf_main.EnKFMain + @type verbose: bool + @type context: SubstitutionList + @rtype: bool + """ + self.__running = True + success = Workflow.cNamespace().try_compile(self, context) + + if success: + for job, args in self: + self.__current_job = job + if not self.__cancelled: + return_value = job.run(ert, args, verbose) + #todo store results? + + self.__current_job = None + self.__running = False + return success + + + def free(self): + Workflow.cNamespace().free(self) + + def isRunning(self): + return self.__running + + def cancel(self): + if self.__current_job is not None: + self.__current_job.cancel() + + self.__cancelled = True + + def isCancelled(self): + return self.__cancelled + + def wait(self): + while self.isRunning(): + time.sleep(1) + + def getLastError(self): + """ @rtype: ConfigError """ + return Workflow.cNamespace().get_last_error(self) + + @classmethod + def createCReference(cls, c_pointer, parent=None): + workflow = super(Workflow, cls).createCReference(c_pointer, parent) + workflow.__running = False + workflow.__cancelled = False + workflow.__current_job = None + return workflow + + +CWrapper.registerObjectType("workflow", Workflow) + +cwrapper = CWrapper(JOB_QUEUE_LIB) + +Workflow.cNamespace().alloc = cwrapper.prototype("c_void_p workflow_alloc(char*, workflow_joblist)") +Workflow.cNamespace().free = cwrapper.prototype("void workflow_free(workflow)") +Workflow.cNamespace().count = cwrapper.prototype("int workflow_size(workflow)") +Workflow.cNamespace().iget_job = cwrapper.prototype("workflow_job_ref workflow_iget_job(workflow, int)") +Workflow.cNamespace().iget_args = cwrapper.prototype("stringlist_ref workflow_iget_arguments(workflow, int)") + +Workflow.cNamespace().try_compile = cwrapper.prototype("bool workflow_try_compile(workflow, subst_list)") +Workflow.cNamespace().get_last_error = cwrapper.prototype("config_error_ref workflow_get_last_error(workflow)") diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_job.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_job.py new file mode 100644 index 0000000000..df414273e8 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_job.py @@ -0,0 +1,130 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.job_queue import JOB_QUEUE_LIB, ErtScript, FunctionErtScript +from ert.config import ContentTypeEnum +from ert.job_queue.external_ert_script import ExternalErtScript + + +class WorkflowJob(BaseCClass): + + def __init__(self, name, internal=True): + c_ptr = WorkflowJob.cNamespace().alloc(name, internal) + super(WorkflowJob, self).__init__(c_ptr) + + self.__script = None + """ :type: ErtScript """ + + def isInternal(self): + """ @rtype: bool """ + return WorkflowJob.cNamespace().internal(self) + + def name(self): + """ @rtype: str """ + return WorkflowJob.cNamespace().name(self) + + def minimumArgumentCount(self): + """ @rtype: int """ + return WorkflowJob.cNamespace().min_arg(self) + + def maximumArgumentCount(self): + """ @rtype: int """ + return WorkflowJob.cNamespace().max_arg(self) + + def functionName(self): + """ @rtype: str """ + return WorkflowJob.cNamespace().get_function(self) + + def module(self): + """ @rtype: str """ + return WorkflowJob.cNamespace().get_module(self) + + def executable(self): + """ @rtype: str """ + return WorkflowJob.cNamespace().get_executable(self) + + def isInternalScript(self): + """ @rtype: bool """ + return WorkflowJob.cNamespace().is_internal_script(self) + + def getInternalScriptPath(self): + """ @rtype: str """ + return WorkflowJob.cNamespace().get_internal_script(self) + + def argumentTypes(self): + """ @rtype: list of type """ + + result = [] + for index in range(self.maximumArgumentCount()): + t = WorkflowJob.cNamespace().arg_type(self, index) + if t == ContentTypeEnum.CONFIG_BOOL: + result.append(bool) + elif t == ContentTypeEnum.CONFIG_FLOAT: + result.append(float) + elif t == ContentTypeEnum.CONFIG_INT: + result.append(int) + elif t == ContentTypeEnum.CONFIG_STRING: + result.append(str) + else: + result.append(None) + + return result + + + def run(self, ert, arguments, verbose=False): + """ + @type ert: ert.enkf.enkf_main.EnKFMain + @type arguments: list of str + @type verbose: bool + @rtype: ctypes.c_void_p + """ + + min_arg = self.minimumArgumentCount() + if min_arg > 0 and len(arguments) < min_arg: + raise UserWarning("The job: %s requires at least %d arguments, %d given." % (self.name(), min_arg, len(arguments))) + + max_arg = self.maximumArgumentCount() + if 0 < max_arg < len(arguments): + raise UserWarning("The job: %s can only have %d arguments, %d given." % (self.name(), max_arg, len(arguments))) + + + if self.isInternalScript(): + script_obj = ErtScript.loadScriptFromFile(self.getInternalScriptPath()) + self.__script = script_obj(ert) + return self.__script.initializeAndRun(self.argumentTypes(), arguments, verbose=verbose) + + elif self.isInternal() and not self.isInternalScript(): + self.__script = FunctionErtScript(ert, self.functionName(), self.argumentTypes(), argument_count=len(arguments)) + return self.__script.initializeAndRun(self.argumentTypes(), arguments, verbose=verbose) + + elif not self.isInternal(): + self.__script = ExternalErtScript(ert, self.executable()) + return self.__script.initializeAndRun(self.argumentTypes(), arguments, verbose=verbose) + + else: + raise UserWarning("Unknown script type!") + + def cancel(self): + if self.__script is not None: + self.__script.cancel() + + def free(self): + WorkflowJob.cNamespace().free(self) + + +CWrapper.registerObjectType("workflow_job", WorkflowJob) + +cwrapper = CWrapper(JOB_QUEUE_LIB) + +WorkflowJob.cNamespace().alloc = cwrapper.prototype("c_void_p workflow_job_alloc(char*, bool)") +WorkflowJob.cNamespace().free = cwrapper.prototype("void workflow_job_free(workflow_job)") +WorkflowJob.cNamespace().name = cwrapper.prototype("char* workflow_job_get_name(workflow_job)") +WorkflowJob.cNamespace().internal = cwrapper.prototype("bool workflow_job_internal(workflow_job)") +WorkflowJob.cNamespace().is_internal_script = cwrapper.prototype("bool workflow_job_is_internal_script(workflow_job)") +WorkflowJob.cNamespace().get_internal_script = cwrapper.prototype("char* workflow_job_get_internal_script_path(workflow_job)") +WorkflowJob.cNamespace().get_function = cwrapper.prototype("char* workflow_job_get_function(workflow_job)") +WorkflowJob.cNamespace().get_module = cwrapper.prototype("char* workflow_job_get_module(workflow_job)") +WorkflowJob.cNamespace().get_executable = cwrapper.prototype("char* workflow_job_get_executable(workflow_job)") + +WorkflowJob.cNamespace().min_arg = cwrapper.prototype("int workflow_job_get_min_arg(workflow_job)") +WorkflowJob.cNamespace().max_arg = cwrapper.prototype("int workflow_job_get_max_arg(workflow_job)") +WorkflowJob.cNamespace().arg_type = cwrapper.prototype("config_content_type_enum workflow_job_iget_argtype(workflow_job, int)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_joblist.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_joblist.py new file mode 100644 index 0000000000..9f2081d9eb --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_joblist.py @@ -0,0 +1,68 @@ +import os +from ert.cwrap import BaseCClass, CWrapper +from ert.job_queue import JOB_QUEUE_LIB, WorkflowJob + + +class WorkflowJoblist(BaseCClass): + + def __init__(self): + c_ptr = WorkflowJoblist.cNamespace().alloc() + super(WorkflowJoblist, self).__init__(c_ptr) + + + def addJob(self, job): + """ @type job: WorkflowJob """ + job.convertToCReference(self) + WorkflowJoblist.cNamespace().add_job(self, job) + + def addJobFromFile(self, name, filepath): + """ + @type name: str + @type filepath: str + @rtype: bool + """ + if not os.path.exists(filepath): + raise UserWarning("Job file '%s' does not exist!" % filepath) + + return WorkflowJoblist.cNamespace().add_job_from_file(self, name, filepath) + + def __contains__(self, item): + """ + @type item: str or WorkflowJob + @rtype: bool + """ + + if isinstance(item, WorkflowJob): + item = item.name() + + return WorkflowJoblist.cNamespace().has_job(self, item) + + + def __getitem__(self, item): + """ + @type item: str + @rtype: WorkflowJob + """ + + if not item in self: + return None + + return WorkflowJoblist.cNamespace().get_job(self, item) + + + def free(self): + WorkflowJoblist.cNamespace().free(self) + + +CWrapper.registerObjectType("workflow_joblist", WorkflowJoblist) + +cwrapper = CWrapper(JOB_QUEUE_LIB) + +WorkflowJoblist.cNamespace().alloc = cwrapper.prototype("c_void_p workflow_joblist_alloc()") +WorkflowJoblist.cNamespace().free = cwrapper.prototype("void workflow_joblist_free(workflow_joblist)") + +WorkflowJoblist.cNamespace().add_job = cwrapper.prototype("void workflow_joblist_add_job(workflow_joblist, workflow_job)") +WorkflowJoblist.cNamespace().add_job_from_file = cwrapper.prototype("bool workflow_joblist_add_job_from_file(workflow_joblist, char*, char*)") +WorkflowJoblist.cNamespace().has_job = cwrapper.prototype("bool workflow_joblist_has_job(workflow_joblist, char*)") +WorkflowJoblist.cNamespace().get_job = cwrapper.prototype("workflow_job_ref workflow_joblist_get_job(workflow_joblist, char*)") +WorkflowJoblist.cNamespace().count = cwrapper.prototype("workflow_job_ref workflow_joblist_get_job(workflow_joblist, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_runner.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_runner.py new file mode 100644 index 0000000000..a281c0d738 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/workflow_runner.py @@ -0,0 +1,63 @@ +from threading import Thread +from ert.job_queue import Workflow +from ert.util.substitution_list import SubstitutionList + + +class WorkflowRunner(object): + def __init__(self, workflow, ert=None, context=None): + """ + @type workflow: Workflow + @type ert: ert.enkf.EnKFMain + @type context: SubstitutionList + """ + super(WorkflowRunner, self).__init__() + + self.__workflow = workflow + self.__ert = ert + + if context is None: + context = SubstitutionList() + + self.__context = context + self.__workflow_result = None + + def run(self): + workflow_thread = Thread(name="ert_gui_workflow_thread") + workflow_thread.setDaemon(True) + workflow_thread.run = self.__runWorkflow + workflow_thread.start() + + def __runWorkflow(self): + self.__workflow_result = self.__workflow.run(self.__ert, context=self.__context) + + def isRunning(self): + """ @rtype: bool """ + return self.__workflow.isRunning() + + def isCancelled(self): + """ @rtype: bool """ + return self.__workflow.isCancelled() + + def cancel(self): + if self.isRunning(): + self.__workflow.cancel() + + def wait(self): + self.__workflow.wait() + + def workflowResult(self): + """ @rtype: bool or None """ + return self.__workflow_result + + def workflowError(self): + """ @rtype: str """ + error = self.__workflow.getLastError() + + error_message = "" + + for error_line in error: + error_message += error_line + "\n" + + return error_message + + diff --git a/ThirdParty/Ert/devel/python/python/ert/rms/__init__.py b/ThirdParty/Ert/devel/python/python/ert/rms/__init__.py index e69de29bb2..f80a3dffa6 100644 --- a/ThirdParty/Ert/devel/python/python/ert/rms/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/rms/__init__.py @@ -0,0 +1,4 @@ +from ert.cwrap import clib + + +RMS_LIB = clib.ert_load("librms") diff --git a/ThirdParty/Ert/devel/python/python/ert/rms/librms.py b/ThirdParty/Ert/devel/python/python/ert/rms/librms.py index ef020f15f0..e69de29bb2 100644 --- a/ThirdParty/Ert/devel/python/python/ert/rms/librms.py +++ b/ThirdParty/Ert/devel/python/python/ert/rms/librms.py @@ -1,22 +0,0 @@ -# Copyright (C) 2011 Statoil ASA, Norway. -# -# The file 'librms.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. - - -import ert.cwrap.clib as clib -from ert.ecl import ECL_LIB - -lib = clib.ert_load("librms.so") - diff --git a/ThirdParty/Ert/devel/python/python/ert/sched/__init__.py b/ThirdParty/Ert/devel/python/python/ert/sched/__init__.py index 55bcc4477e..d82bd8a47d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/sched/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/sched/__init__.py @@ -19,9 +19,9 @@ import ert.util import ert.geo -SCHED_LIB = clib.ert_load("libsched.so") +SCHED_LIB = clib.ert_load("libsched") from .sched_file import SchedFile from .history_source_enum import HistorySourceEnum -from .history import History \ No newline at end of file +from .history import History diff --git a/ThirdParty/Ert/devel/python/python/ert/sched/sched_file.py b/ThirdParty/Ert/devel/python/python/ert/sched/sched_file.py index 722b5fe11c..bbe5e16e34 100644 --- a/ThirdParty/Ert/devel/python/python/ert/sched/sched_file.py +++ b/ThirdParty/Ert/devel/python/python/ert/sched/sched_file.py @@ -15,12 +15,12 @@ # for more details. from ert.cwrap import BaseCClass, CWrapper from ert.sched import SCHED_LIB -from ert.util import ctime +from ert.util import CTime class SchedFile(BaseCClass): def __init__(self, filename, start_time): - c_ptr = SchedFile.cNamespace().parse(filename, ctime(start_time)) + c_ptr = SchedFile.cNamespace().parse(filename, CTime(start_time)) super(SchedFile, self).__init__(c_ptr) @property diff --git a/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt new file mode 100644 index 0000000000..da5f21f1c2 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt @@ -0,0 +1,8 @@ +set(PYTHON_SOURCES + __init__.py + ert_server.py + ert_socket.py + ) + +add_python_package("python.ert.server" ${PYTHON_INSTALL_PREFIX}/ert/server "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert/server/__init__.py b/ThirdParty/Ert/devel/python/python/ert/server/__init__.py new file mode 100644 index 0000000000..58c29cce39 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/server/__init__.py @@ -0,0 +1,3 @@ +from .ert_server import ErtServer +from .ert_socket import ErtSocket + diff --git a/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py b/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py new file mode 100644 index 0000000000..897c374486 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py @@ -0,0 +1,66 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ert_server.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import sys +import threading +import json +import os + +from ert.enkf import EnKFMain + +class ErtServer(object): + site_config = None + + def __init__(self , config_file = None): + self.ert_handle = None + if config_file: + if os.path.exists(config_file): + self.open( config_file ) + else: + raise IOError("The config file:%s does not exist" % config_file) + + + def open(self , config_file): + self.config_file = config_file + self.ert_handle = EnKFMain( config_file , ErtServer.site_config ) + + + + def close(self): + # More cleanup first ... + self.ert_handle = None + + + def isConnected(self): + if self.ert_handle: + return True + else: + return False + + + def __del__(self): + if self.isConnected(): + self.close() + + + + def evalCmd(self , cmd_expr): + cmd = cmd_expr[0] + if cmd == "STATUS": + if self.isConnected(): + return ["OPEN"] + else: + return ["CLOSED"] diff --git a/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py b/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py new file mode 100644 index 0000000000..1f4e4c8a07 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py @@ -0,0 +1,88 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'ert_socket.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import SocketServer +import time +import sys +import threading +import json + +from ert.server import ErtServer + +class ErtHandler(SocketServer.StreamRequestHandler): + ert_server = None + config_file = None + + + def handle(self): + data = self.rfile.readline().strip() + try: + json_data = json.loads( data ) + if json_data[0] == "QUIT": + self.handleQuit() + else: + self.evalJson( json_data ) + except Exception,e: + self.handleInvalidJSON(data , e) + + + + def evalJson(self , json_data): + cmd = json_data[0] + if cmd == "ECHO": + self.wfile.write( json.dumps( json_data[1:] )) + else: + result = self.ert_server.evalCmd( json_data ) + self.wfile.write( json.dumps( result )) + + + + def handleInvalidJSON(self , data , e): + json_string = json.dumps({"ERROR" : "%s" % e , "input" : "%s" % data}) + self.wfile.write( json_string ) + + + + def handleQuit(self): + print "Handling QUIT - shutting down ert server" + self.wfile.write(json.dumps(["QUIT"])) + shutdown_thread = threading.Thread( target = self.server.shutdown ) + shutdown_thread.start() + + + + +class ErtSocket(object): + + def __init__(self , config_file , port , host = "localhost"): + self.open(config_file) + self.server = SocketServer.TCPServer((host , port) , ErtHandler) + + def open(self , config_file): + try: + ert_server = ErtServer( config_file ) + except Exception: + ert_server = ErtServer( ) + ErtHandler.ert_server = ert_server + + + def evalCmd(self , cmd): + return ErtHandler.ert_server.evalCmd( cmd ) + + + def listen(self): + self.server.serve_forever( ) + diff --git a/ThirdParty/Ert/devel/python/python/ert/test/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/test/CMakeLists.txt new file mode 100644 index 0000000000..62ac811f64 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/test/CMakeLists.txt @@ -0,0 +1,12 @@ +set(PYTHON_SOURCES + __init__.py + ert_test_context.py + ert_test_runner.py + extended_testcase.py + test_run.py + source_enumerator.py + test_area.py +) + +add_python_package("python.ert.test" ${PYTHON_INSTALL_PREFIX}/ert/test "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert/test/__init__.py b/ThirdParty/Ert/devel/python/python/ert/test/__init__.py new file mode 100644 index 0000000000..7463d32523 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/test/__init__.py @@ -0,0 +1,7 @@ +from .test_run import TestRun +from .test_run import path_exists +from .extended_testcase import ExtendedTestCase +from .source_enumerator import SourceEnumerator +from .test_area import TestArea , TestAreaContext +from .ert_test_context import ErtTestContext, ErtTest +from .ert_test_runner import ErtTestRunner diff --git a/ThirdParty/Ert/devel/python/python/ert/test/ert_test_context.py b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_context.py new file mode 100644 index 0000000000..3ade33f250 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_context.py @@ -0,0 +1,120 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'test_work_area.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import os.path + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB, EnKFMain + +class ErtTest(BaseCClass): + + def __init__(self, test_name, model_config, site_config=None, store_area=False): + if not os.path.exists(model_config): + raise IOError("The configuration file: %s does not exist" % model_config) + else: + c_ptr = ErtTest.cNamespace().alloc(test_name, model_config, site_config) + super(ErtTest, self).__init__(c_ptr) + self.setStore(store_area) + + self.__ert = None + + def setStore(self, store): + ErtTest.cNamespace().set_store(self, store) + + def getErt(self): + """ @rtype: EnKFMain """ + if self.__ert is None: + self.__ert = ErtTest.cNamespace().get_enkf_main(self) + + return self.__ert + + def free(self): + ErtTest.cNamespace().free(self) + + def installWorkflowJob(self, job_name, job_path): + """ @rtype: bool """ + if os.path.exists(job_path) and os.path.isfile(job_path): + ert = self.getErt() + workflow_list = ert.getWorkflowList() + + workflow_list.addJob(job_name, job_path) + return workflow_list.hasJob(job_name) + else: + return False + + def runWorkflowJob(self, job_name, *arguments): + """ @rtype: bool """ + ert = self.getErt() + workflow_list = ert.getWorkflowList() + + if workflow_list.hasJob(job_name): + job = workflow_list.getJob(job_name) + job.run(ert, [arg for arg in arguments]) + return True + else: + return False + + + def getCwd(self): + """ + Returns the current working directory of this context. + @rtype: string + """ + return ErtTest.cNamespace().get_cwd( self ) + + + +class ErtTestContext(object): + def __init__(self, test_name, model_config, site_config=None, store_area=False): + self.__test_name = test_name + self.__model_config = model_config + self.__site_config = site_config + self.__store_area = store_area + self.__test_context = ErtTest(self.__test_name, self.__model_config, site_config=self.__site_config, store_area=self.__store_area) + + + def __enter__(self): + """ @rtype: ErtTest """ + return self.__test_context + + + def __exit__(self, exc_type, exc_val, exc_tb): + del self.__test_context + return False + + + def getErt(self): + return self.__test_context.getErt() + + + def getCwd(self): + """ + Returns the current working directory of this context. + @rtype: string + """ + return self.__test_context.getCwd() + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("ert_test", ErtTest) + +ErtTest.cNamespace().alloc = cwrapper.prototype("c_void_p ert_test_context_alloc_python( char* , char* , char*)") +ErtTest.cNamespace().set_store = cwrapper.prototype("c_void_p ert_test_context_set_store( ert_test , bool)") +ErtTest.cNamespace().free = cwrapper.prototype("void ert_test_context_free( ert_test )") +ErtTest.cNamespace().get_enkf_main = cwrapper.prototype("enkf_main_ref ert_test_context_get_main( ert_test )") +ErtTest.cNamespace().get_cwd = cwrapper.prototype("char* ert_test_context_get_cwd( ert_test )") + diff --git a/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py new file mode 100644 index 0000000000..c4c93d8f3c --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py @@ -0,0 +1,57 @@ +import os + +try: + from unittest2 import TestLoader, TextTestRunner +except ImportError: + from unittest import TestLoader, TextTestRunner + + +class ErtTestRunner(object): + + @staticmethod + def findTestsInDirectory(path, recursive=True): + loader = TestLoader() + tests = loader.discover(path) + + for (root, dirnames, filenames) in os.walk( path ): + for directory in dirnames: + tests.addTests(ErtTestRunner.findTestsInDirectory(os.path.join(root, directory), recursive)) + + return tests + + + @staticmethod + def runTestsInDirectory(path=".", recursive=True, test_verbosity=3): + tests = ErtTestRunner.findTestsInDirectory(path, recursive) + if tests.countTestCases() > 0: + print("Running %d tests in %s" % (tests.countTestCases(), path)) + + test_runner = TextTestRunner(verbosity=test_verbosity) + result = test_runner.run(tests) + + return result.wasSuccessful() + + + @staticmethod + def runTestsInClass(classpath, test_verbosity=3): + klass = ErtTestRunner.importClass(classpath) + loader = TestLoader() + tests = loader.loadTestsFromTestCase(klass) + testRunner = TextTestRunner(verbosity=test_verbosity) + testRunner.run(tests) + + + @staticmethod + def importClass(classpath): + dot = classpath.rfind(".") + class_name = classpath[dot + 1:len(classpath)] + m = __import__(classpath[0:dot], globals(), locals(), [class_name]) + return getattr(m, class_name) + + + @staticmethod + def getTestsFromTestClass(test_class_path, argv=None): + klass = ErtTestRunner.importClass(test_class_path) + klass.argv = argv + loader = TestLoader() + return loader.loadTestsFromTestCase(klass) diff --git a/ThirdParty/Ert/devel/python/python/ert/test/extended_testcase.py b/ThirdParty/Ert/devel/python/python/ert/test/extended_testcase.py new file mode 100644 index 0000000000..f22745f988 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/test/extended_testcase.py @@ -0,0 +1,169 @@ +import numbers +import os +import os.path +import traceback + +try: + from unittest2 import TestCase +except ImportError: + from unittest import TestCase + +from .source_enumerator import SourceEnumerator + + +""" +This class provides some extra functionality for testing values that are almost equal. +""" +class ExtendedTestCase(TestCase): + def __init__(self , *args , **kwargs): + self.__testdata_root = None + self.__share_root = None + super(ExtendedTestCase , self).__init__(*args , **kwargs) + + + def assertFloatEqual(self, first, second, msg=None): + + if msg is None: + msg = "Value %f and %f are not almost equal!" % (first, second) + + if isinstance(first, numbers.Number) and isinstance(second, numbers.Number): + tolerance = 1e-6 + diff = abs(first - second) + scale = max(1, abs(first) + abs(second)) + + self.assertTrue(diff < tolerance * scale, msg=msg) + else: + self.fail("Elements not comparable as float: %s and %s" % (first, second)) + + + def assertAlmostEqualList(self, first, second, msg=None): + if len(first) != len(second): + self.fail("Lists are not of same length!") + + for index in range(len(first)): + self.assertFloatEqual(first[index], second[index], msg=msg) + + + def assertImportable(self, module_name): + try: + __import__(module_name) + except ImportError: + tb = traceback.format_exc() + self.fail("Module %s not found!\n\nTrace:\n%s" % (module_name, str(tb))) + except Exception: + tb = traceback.format_exc() + self.fail("Import of module %s caused errors!\n\nTrace:\n%s" % (module_name, str(tb))) + + + def assertFilesAreEqual(self, first, second): + if not self.__filesAreEqual(first, second): + self.fail("Buffer contents of files are not identical!") + + + def assertFilesAreNotEqual(self, first, second): + if self.__filesAreEqual(first, second): + self.fail("Buffer contents of files are identical!") + + def assertFileExists(self, path): + if not os.path.exists(path) or not os.path.isfile(path): + self.fail("The file: %s does not exist!" % path) + + def assertDirectoryExists(self, path): + if not os.path.exists(path) or not os.path.isdir(path): + self.fail("The directory: %s does not exist!" % path) + + def assertFileDoesNotExist(self, path): + if os.path.exists(path) and os.path.isfile(path): + self.fail("The file: %s exists!" % path) + + def assertDirectoryDoesNotExist(self, path): + if os.path.exists(path) and os.path.isdir(path): + self.fail("The directory: %s exists!" % path) + + def __filesAreEqual(self, first, second): + buffer1 = open(first).read() + buffer2 = open(second).read() + + return buffer1 == buffer2 + + def assertEnumIsFullyDefined(self, enum_class, enum_name, source_path, verbose=False): + enum_values = SourceEnumerator.findEnumerators(enum_name, source_path) + + for identifier, value in enum_values: + if verbose: + print("%s = %d" % (identifier, value)) + + self.assertTrue(enum_class.__dict__.has_key(identifier), "Enum does not have identifier: %s" % identifier) + class_value = enum_class.__dict__[identifier] + self.assertEqual(class_value, value, "Enum value for identifier: %s does not match: %s != %s" % (identifier, class_value, value)) + + + def setTestDataRoot(self, testdata_root): + self.__testdata_root = testdata_root + if not os.path.exists(self.__testdata_root): + raise IOError("Path:%s not found" % self.__testdata_root) + + def setShareRoot(self, share_root): + self.__share_root = share_root + if not os.path.exists(self.__share_root): + raise IOError("Path: %s not found" % self.__share_root) + + + def createTestPath(self, path, testdata_root=None): + if testdata_root is None and self.__testdata_root is None: + file_path = os.path.realpath(__file__) + build_root = os.path.realpath(os.path.join(os.path.dirname(file_path), "../../../../devel/test-data/")) + src_root = os.path.realpath(os.path.join(os.path.dirname(file_path), "../../../../test-data/")) + + if os.path.exists( build_root ): + root = os.path.realpath( os.environ.get("ERT_TEST_ROOT_PATH", build_root) ) + elif os.path.exists( src_root ): + root = os.path.realpath( os.environ.get("ERT_TEST_ROOT_PATH", src_root) ) + else: + root = None + + self.setTestDataRoot( root ) + + + root_path = self.__testdata_root + if testdata_root is not None: + if not os.path.exists(testdata_root): + raise IOError("Path: %s not found" % testdata_root) + + root_path = testdata_root + + return os.path.realpath(os.path.join(root_path , path)) + + + def createSharePath(self, path, share_root=None): + if share_root is None and self.__share_root is None: + file_path = os.path.realpath(__file__) + build_root = os.path.realpath(os.path.join(os.path.dirname(file_path), "../../../../devel/share/")) + src_root = os.path.realpath(os.path.join(os.path.dirname(file_path), "../../../../share/")) + + if os.path.exists(build_root): + root = os.path.realpath( os.environ.get("ERT_SHARE_PATH", build_root)) + elif os.path.exists(src_root): + root = os.path.realpath( os.environ.get("ERT_SHARE_PATH", src_root)) + else: + root = None + + self.setShareRoot(root) + + + root_path = self.__share_root + if share_root is not None: + if not os.path.exists(share_root): + raise IOError("Path: %s not found" % share_root) + + root_path = share_root + + return os.path.realpath(os.path.join(root_path , path)) + + @staticmethod + def slowTestShouldNotRun(): + """ + @param: The slow test flag can be set by environment variable SKIP_SLOW_TESTS = [True|False] + """ + + return os.environ.get("SKIP_SLOW_TESTS", "False") == "True" diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/source_enumerator.py b/ThirdParty/Ert/devel/python/python/ert/test/source_enumerator.py similarity index 75% rename from ThirdParty/Ert/devel/python/test/ert_tests/source_enumerator.py rename to ThirdParty/Ert/devel/python/python/ert/test/source_enumerator.py index f81e59375c..707f4e8661 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/source_enumerator.py +++ b/ThirdParty/Ert/devel/python/python/ert/test/source_enumerator.py @@ -3,17 +3,30 @@ class SourceEnumerator(object): @classmethod - def findDevRoot(cls, root_directory_name = "devel"): + def findDevRoot(cls, root_directory_name = "devel", verbose=False): dev_root = os.path.dirname(os.path.realpath(__file__)) - - while os.path.basename(dev_root) != root_directory_name: + while True: + if verbose: + print("Looking at: %s" % dev_root) + + dev_path = os.path.join(dev_root , root_directory_name) + if os.path.exists( dev_path ): + dev_root = os.path.join(dev_root , root_directory_name) + if verbose: + print("break: %s" % dev_path) + break + head, tail = os.path.split(dev_root) dev_root = head if tail == "": raise ValueError("Source root: '%s' not found!" % root_directory_name) + if verbose: + print("Returning: %s " % dev_root) + return dev_root + @classmethod def findSourceFile(cls, path): dev_root = SourceEnumerator.findDevRoot() @@ -21,7 +34,7 @@ def findSourceFile(cls, path): source_file = os.path.join(dev_root, path) if not os.path.exists(source_file): - raise ValueError("File not found: %s" % path) + raise ValueError("File not found: %s:%s" % (path , source_file)) return source_file diff --git a/ThirdParty/Ert/devel/python/python/ert/util/test_area.py b/ThirdParty/Ert/devel/python/python/ert/test/test_area.py similarity index 95% rename from ThirdParty/Ert/devel/python/python/ert/util/test_area.py rename to ThirdParty/Ert/devel/python/python/ert/test/test_area.py index 49123fcd6e..b731699034 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/test_area.py +++ b/ThirdParty/Ert/devel/python/python/ert/test/test_area.py @@ -30,7 +30,9 @@ def __init__(self, test_name, prefix = None , store_area=False): c_ptr = TestArea.cNamespace().test_area_alloc(test_name) super(TestArea, self).__init__(c_ptr) self.set_store( store_area ) - + + def get_original_cwd(self): + return TestArea.cNamespace().get_original_cwd(self) def get_cwd(self): return TestArea.cNamespace().get_cwd(self) @@ -98,4 +100,5 @@ def __exit__(self, exc_type, exc_val, exc_tb): TestArea.cNamespace().copy_parent_directory = cwrapper.prototype("void test_work_area_copy_parent_directory( test_area , char* )") TestArea.cNamespace().copy_parent_content = cwrapper.prototype("void test_work_area_copy_parent_content( test_area , char* )") TestArea.cNamespace().get_cwd = cwrapper.prototype("char* test_work_area_get_cwd( test_area )") +TestArea.cNamespace().get_original_cwd = cwrapper.prototype("char* test_work_area_get_original_cwd( test_area )") TestArea.cNamespace().set_store = cwrapper.prototype("void test_work_area_set_store( test_area , bool)") diff --git a/ThirdParty/Ert/devel/python/python/ert/test_run/test_run.py b/ThirdParty/Ert/devel/python/python/ert/test/test_run.py similarity index 88% rename from ThirdParty/Ert/devel/python/python/ert/test_run/test_run.py rename to ThirdParty/Ert/devel/python/python/ert/test/test_run.py index 079fc88d86..496353ba4d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/test_run/test_run.py +++ b/ThirdParty/Ert/devel/python/python/ert/test/test_run.py @@ -16,7 +16,8 @@ import random import os.path import subprocess -from ert.util import TestAreaContext +import argparse +from .test_area import TestAreaContext def path_exists( path ): @@ -28,16 +29,17 @@ def path_exists( path ): class TestRun(object): default_ert_cmd = "ert" + default_ert_version = "stable" default_path_prefix = None - def __init__(self , config_file , name = None): + def __init__(self , config_file , args = [] , name = None): if os.path.exists( config_file ) and os.path.isfile( config_file ): + self.parseArgs(args) self.__ert_cmd = TestRun.default_ert_cmd self.path_prefix = TestRun.default_path_prefix self.config_file = config_file self.check_list = [] - self.args = [] self.workflows = [] if name: self.name = name @@ -51,7 +53,16 @@ def __init__(self , config_file , name = None): self.name += "/%08d" % random.randint(0,100000000) else: raise IOError("No such config file: %s" % config_file) + + def parseArgs(self , args): + parser = argparse.ArgumentParser() + parser.add_argument("-v" , "--version" , default = self.default_ert_version) + parser.add_argument("args" , nargs="*") + result = parser.parse_args(args) + self.ert_version = result.version + self.args = result.args + def get_config_file(self): return self.__config_file @@ -84,15 +95,6 @@ def set_ert_cmd(self , cmd): #----------------------------------------------------------------- - def get_args(self): - return self.args - - - def add_arg(self , arg): - self.args.append(arg) - - #----------------------------------------------------------------- - def get_workflows(self): return self.workflows @@ -102,6 +104,11 @@ def add_workflow(self , workflow): #----------------------------------------------------------------- + def get_args(self): + return self.args + + #----------------------------------------------------------------- + def add_check( self , check_func , arg): if callable(check_func): self.check_list.append( (check_func , arg) ) @@ -111,7 +118,7 @@ def add_check( self , check_func , arg): #----------------------------------------------------------------- def __run(self , work_area ): - argList = [ self.ert_cmd ] + argList = [ self.ert_cmd , "-v" , self.ert_version ] for arg in self.args: argList.append( arg ) @@ -128,7 +135,7 @@ def __run(self , work_area ): def run(self): if len(self.workflows): - with TestAreaContext(self.name , prefix = self.path_prefix , store_area = True) as work_area: + with TestAreaContext(self.name , prefix = self.path_prefix , store_area = False) as work_area: test_cwd = work_area.get_cwd() work_area.copy_parent_content( self.abs_config_file ) status = self.__run( work_area ) diff --git a/ThirdParty/Ert/devel/python/python/ert/test_run/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/test_run/CMakeLists.txt deleted file mode 100644 index 6f6cbb5d14..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/test_run/CMakeLists.txt +++ /dev/null @@ -1,7 +0,0 @@ -set(PYTHON_SOURCES - __init__.py - test_run.py -) - -add_python_package("python.ert.test_run" ${PYTHON_INSTALL_PREFIX}/ert/test_run "${PYTHON_SOURCES}" True) - diff --git a/ThirdParty/Ert/devel/python/python/ert/test_run/__init__.py b/ThirdParty/Ert/devel/python/python/ert/test_run/__init__.py deleted file mode 100644 index df85fe2bb2..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/test_run/__init__.py +++ /dev/null @@ -1,2 +0,0 @@ -from .test_run import TestRun -from .test_run import path_exists diff --git a/ThirdParty/Ert/devel/python/python/ert/util/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/util/CMakeLists.txt index 8302d02af4..22a3020516 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/util/CMakeLists.txt @@ -1,20 +1,25 @@ set(PYTHON_SOURCES __init__.py + bool_vector.py buffer.py ctime.py + double_vector.py hash.py + int_vector.py latex.py log.py lookup_table.py matrix.py + rng.py stat.py stringlist.py substitution_list.py - test_area.py - tvector.py - util_func.py + thread_pool.py + time_vector.py ui_return.py - rng.py + util_func.py + vector_template.py + version.py ) add_python_package("python.ert.util" ${PYTHON_INSTALL_PREFIX}/ert/util "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/util/__init__.py b/ThirdParty/Ert/devel/python/python/ert/util/__init__.py index cbd7d27fad..06e8dfec76 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/__init__.py @@ -38,36 +38,43 @@ import ert.cwrap.clib as clib -clib.load("libz" , "libz.so.1") +# The libert_util library requires the libraries libz, libblas and +# liblapack. It is assumed that the library has been compiled with a +# suitable RPATH option (i.e. ERT_USE_RPATH has been set to True in +# the build process) and we 'just' load the final libert_util library +# directly. In principle it would be possible preload these libraries +# with calls like: +# +# clib.load("libz" , "libz.so.1") +# clib.load("libblas" , "libblas.so" , "libblas.so.3") +# clib.load("liblapack" , "liblapack.so") -# Depending on the Fortran compiler which has been used to compile -# blas / lapack the there might be an additional dependency on libg2c: +UTIL_LIB = clib.ert_load("libert_util") -try: - # First try to load without libg2c - clib.load("libblas.so" , "libblas.so.3") - clib.load("liblapack.so") -except ImportError: - # Then try to load with libg2c - clib.load("libg2c.so.0") - clib.load("libblas.so" , "libblas.so.3") - clib.load("liblapack.so") - -UTIL_LIB = clib.ert_load("libert_util.so") +from .version import Version from .enums import RngAlgTypeEnum, RngInitModeEnum -from .tvector import DoubleVector, IntVector, BoolVector, TimeVector, TVector +from .ctime import CTime + +from .vector_template import VectorTemplate, PermutationVector +from .double_vector import DoubleVector +from .int_vector import IntVector +from .bool_vector import BoolVector +from .time_vector import TimeVector + from .stringlist import StringList from .stat import quantile, quantile_sorted from .matrix import Matrix from .log import Log from .lookup_table import LookupTable from .buffer import Buffer -from .ctime import ctime from .hash import Hash, StringHash, DoubleHash, IntegerHash -from .latex import LaTeX from .substitution_list import SubstitutionList from .ui_return import UIReturn -from .test_area import TestArea , TestAreaContext from .rng import RandomNumberGenerator +from .thread_pool import ThreadPool + +# Check if latex functionality exists in libert_util +if hasattr(UTIL_LIB, "latex_alloc"): + from .latex import LaTeX diff --git a/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py new file mode 100644 index 0000000000..4017495878 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py @@ -0,0 +1,126 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'vector_template.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + + +from ert.cwrap import CWrapper +from ert.util import UTIL_LIB, VectorTemplate + + +class BoolVector(VectorTemplate): + default_format = "%8d" + + def __init__(self, default_value=False, initial_size=0): + super(BoolVector, self).__init__(default_value, initial_size) + + def count(self, value=True): + """ @rtype: int """ + return BoolVector.cNamespace().count_equal(self, value) + + @classmethod + def active_mask(cls, range_string): + """ + Will create a BoolVector instance with the values from @range_string. + + The range_string input should be of the type "1,3-5,9,17", + i.e. integer values separated by commas, and dashes to + represent ranges. If the input string contains ANY invalid + characters the returned active list will be empty: + + "1,4-7,10" => {F,T,F,F,T,T,T,T,F,F,T} + "1,4-7,10X" => {} + + The empty list will evaluate to false + @rtype: BoolVector + """ + return cls.cNamespace().create_active_mask(range_string) + + @classmethod + def updateActiveMask(cls, range_string, bool_vector): + """ + Updates a bool vector based on a range string. + @type range_string: str + @type bool_vector: BoolVector + @rtype: bool + """ + return cls.cNamespace().update_active_mask(range_string, bool_vector) + + @classmethod + def createFromList(cls, size, source_list): + """Allocates a bool vector from a Python list of indexes""" + bool_vector = BoolVector(False, size) + + for index in source_list: + index = int(index) + bool_vector[index] = True + + return bool_vector + + @classmethod + def createActiveList(cls, mask): + """ @rtype: IntVectorTemplate """ + assert isinstance(mask, BoolVector) + return cls.cNamespace().active_list(mask) + + +cwrapper = CWrapper(UTIL_LIB) +CWrapper.registerObjectType("bool_vector", BoolVector) + + +BoolVector.cNamespace().alloc = cwrapper.prototype("c_void_p bool_vector_alloc( int , bool )") +BoolVector.cNamespace().alloc_copy = cwrapper.prototype("bool_vector_obj bool_vector_alloc_copy( bool_vector )") +BoolVector.cNamespace().strided_copy = cwrapper.prototype("bool_vector_obj bool_vector_alloc_strided_copy( bool_vector , int , int , int)") +BoolVector.cNamespace().free = cwrapper.prototype("void bool_vector_free( bool_vector )") +BoolVector.cNamespace().iget = cwrapper.prototype("bool bool_vector_iget( bool_vector , int )") +BoolVector.cNamespace().safe_iget = cwrapper.prototype("bool bool_vector_safe_iget( bool_vector , int )") +BoolVector.cNamespace().iset = cwrapper.prototype("void bool_vector_iset( bool_vector , int , bool)") +BoolVector.cNamespace().size = cwrapper.prototype("int bool_vector_size( bool_vector )") +BoolVector.cNamespace().append = cwrapper.prototype("void bool_vector_append( bool_vector , bool )") +BoolVector.cNamespace().idel_block = cwrapper.prototype("void bool_vector_idel_block( bool_vector , bool , bool )") +BoolVector.cNamespace().idel = cwrapper.prototype("void bool_vector_idel( bool_vector , int )") +BoolVector.cNamespace().pop = cwrapper.prototype("bool bool_vector_pop( bool_vector )") +BoolVector.cNamespace().lshift = cwrapper.prototype("void bool_vector_lshift( bool_vector , int )") +BoolVector.cNamespace().rshift = cwrapper.prototype("void bool_vector_rshift( bool_vector , int )") +BoolVector.cNamespace().insert = cwrapper.prototype("void bool_vector_insert( bool_vector , int , bool)") +BoolVector.cNamespace().fprintf = cwrapper.prototype("void bool_vector_fprintf( bool_vector , FILE , char* , char*)") +BoolVector.cNamespace().sort = cwrapper.prototype("void bool_vector_sort( bool_vector )") +BoolVector.cNamespace().rsort = cwrapper.prototype("void bool_vector_rsort( bool_vector )") +BoolVector.cNamespace().reset = cwrapper.prototype("void bool_vector_reset( bool_vector )") +BoolVector.cNamespace().set_read_only = cwrapper.prototype("void bool_vector_set_read_only( bool_vector , bool )") +BoolVector.cNamespace().get_read_only = cwrapper.prototype("bool bool_vector_get_read_only( bool_vector )") +BoolVector.cNamespace().get_max = cwrapper.prototype("bool bool_vector_get_max( bool_vector )") +BoolVector.cNamespace().get_min = cwrapper.prototype("bool bool_vector_get_min( bool_vector )") +BoolVector.cNamespace().get_max_index = cwrapper.prototype("int bool_vector_get_max_index( bool_vector , bool)") +BoolVector.cNamespace().get_min_index = cwrapper.prototype("int bool_vector_get_min_index( bool_vector , bool)") +BoolVector.cNamespace().shift = cwrapper.prototype("void bool_vector_shift( bool_vector , bool )") +BoolVector.cNamespace().scale = cwrapper.prototype("void bool_vector_scale( bool_vector , bool )") +BoolVector.cNamespace().div = cwrapper.prototype("void bool_vector_div( bool_vector , bool )") +BoolVector.cNamespace().inplace_add = cwrapper.prototype("void bool_vector_inplace_add( bool_vector , bool_vector )") +BoolVector.cNamespace().inplace_mul = cwrapper.prototype("void bool_vector_inplace_mul( bool_vector , bool_vector )") +BoolVector.cNamespace().assign = cwrapper.prototype("void bool_vector_set_all( bool_vector , bool)") +BoolVector.cNamespace().memcpy = cwrapper.prototype("void bool_vector_memcpy(bool_vector , bool_vector )") +BoolVector.cNamespace().set_default = cwrapper.prototype("void bool_vector_set_default( bool_vector , bool)") +BoolVector.cNamespace().get_default = cwrapper.prototype("bool bool_vector_get_default( bool_vector )") +BoolVector.cNamespace().element_size = cwrapper.prototype("int bool_vector_element_size( bool_vector )") +BoolVector.cNamespace().count_equal = cwrapper.prototype("int bool_vector_count_equal( bool_vector, bool)") + +BoolVector.cNamespace().permute = cwrapper.prototype("void bool_vector_permute(bool_vector, permutation_vector)") +BoolVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj bool_vector_alloc_sort_perm(bool_vector)") +BoolVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj bool_vector_alloc_rsort_perm(bool_vector)") + +BoolVector.cNamespace().create_active_mask = cwrapper.prototype("bool_vector_obj string_util_alloc_active_mask( char* )") +BoolVector.cNamespace().update_active_mask = cwrapper.prototype("bool string_util_update_active_mask(char*, bool_vector)") +BoolVector.cNamespace().active_list = cwrapper.prototype("int_vector_obj bool_vector_alloc_active_list(bool_vector)") +BoolVector.cNamespace().contains = cwrapper.prototype("bool bool_vector_contains(bool_vector, bool)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/ctime.py b/ThirdParty/Ert/devel/python/python/ert/util/ctime.py index e8ae49de15..637f39fc9a 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/ctime.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/ctime.py @@ -17,32 +17,37 @@ import math import ctypes -import types import datetime import time -from ert.cwrap import CWrapper +from types import NoneType +from ert.cwrap import CWrapper, BaseCValue -class ctime(ctypes.c_long): +class CTime(BaseCValue): + DATA_TYPE = ctypes.c_long + def __init__(self, value): - if isinstance(value, types.IntType): - self.value = value + if isinstance(value, int): + value = value + elif isinstance(value, CTime): + value = value.value() + elif isinstance(value, datetime.datetime): + value = int(math.floor(time.mktime((value.year, value.month, value.day, value.hour, value.minute, value.second, 0, 0, -1 )))) + elif isinstance(value, datetime.date): + value = int(math.floor(time.mktime((value.year, value.month, value.day, 0, 0, 0, 0, 0, -1 )))) else: - try: - # Input value is assumed to be datetime.datetime instance - self.value = int(math.floor(time.mktime( - (value.year, value.month, value.day, value.hour, value.minute, value.second, 0, 0, -1 )))) - except (OverflowError, ValueError, AttributeError): - # Input value is assumed to be datetime.date instance - self.value = int(math.floor(time.mktime((value.year, value.month, value.day, 0, 0, 0, 0, 0, -1 )))) + raise NotImplementedError("Can not convert class %s to CTime" % value.__class__) + + super(CTime, self).__init__(value) def ctime(self): - return self.value + """ @rtype: int """ + return self.value() def time(self): """Return this time_t as a time.localtime() object""" - return time.localtime(self.value) + return time.localtime(self.value()) def date(self): """Return this time_t as a datetime.date([year, month, day])""" @@ -55,13 +60,76 @@ def __str__(self): return "%s" % (str(self.datetime())) def __ge__(self, other): - return self.value >= other.value + return self > other or self == other + + def __le__(self, other): + return self < other or self == other + + def __gt__(self, other): + if isinstance(other, CTime): + return self.value() > other.value() + elif isinstance(other, (int, datetime.datetime, datetime.date)): + return self > CTime(other) + else: + raise TypeError("CTIme does not support type: %s" % other.__class__) def __lt__(self, other): - return not self >= other + if isinstance(other, CTime): + return self.value() < other.value() + elif isinstance(other, (int, datetime.datetime, datetime.date)): + return self < CTime(other) + else: + raise TypeError("CTIme does not support type: %s" % other.__class__) + + def __ne__(self, other): + return not self == other def __eq__(self, other): - return self.value == other.value + if isinstance(other, CTime): + return self.value() == other.value() + elif isinstance(other, (int, datetime.datetime, datetime.date)): + return self == CTime(other) + elif isinstance(other, type(None)): + return False + else: + raise TypeError("CTIme does not support type: %s" % other.__class__) + + def __imul__(self, other): + value = int(self.value() * other) + self.setValue(value) + return self + + def __hash__(self): + return hash(self.value()) + + def __iadd__(self , other): + if isinstance(other, CTime): + self.setValue(self.value() + other.value()) + return self + else: + self.setValue(self.value() + CTime(other).value()) + return self + + def __add__(self, other): + copy = CTime( self ) + copy += other + return copy + + def __radd__(self, other): + return self + other + + + def __mul__(self , other): + copy = CTime( self ) + copy *= other + return copy + + def __rmul__(self , other): + return self * other + + def timetuple(self): + # this function is a requirement for comparing against datetime objects where the CTime is on the right side + pass @property def stripped(self): @@ -69,6 +137,5 @@ def stripped(self): cwrapper = CWrapper(None) -cwrapper.registerType("time_t", ctime) -cwrapper.registerType("time_t*", ctypes.POINTER(ctime)) +cwrapper.registerType("time_t", CTime) diff --git a/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py new file mode 100644 index 0000000000..8c2a73986d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py @@ -0,0 +1,71 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'double_vector.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import CWrapper +from ert.util import UTIL_LIB, VectorTemplate + + +class DoubleVector(VectorTemplate): + default_format = "%8.4f" + + def __init__(self, default_value=0, initial_size=0): + super(DoubleVector, self).__init__(default_value, initial_size) + + +cwrapper = CWrapper(UTIL_LIB) +CWrapper.registerObjectType("double_vector", DoubleVector) + + +DoubleVector.cNamespace().alloc = cwrapper.prototype("c_void_p double_vector_alloc( int , double )") +DoubleVector.cNamespace().alloc_copy = cwrapper.prototype("double_vector_obj double_vector_alloc_copy( double_vector )") +DoubleVector.cNamespace().strided_copy = cwrapper.prototype("double_vector_obj double_vector_alloc_strided_copy( double_vector , int , int , int)") +DoubleVector.cNamespace().free = cwrapper.prototype("void double_vector_free( double_vector )") +DoubleVector.cNamespace().iget = cwrapper.prototype("double double_vector_iget( double_vector , int )") +DoubleVector.cNamespace().safe_iget = cwrapper.prototype("double double_vector_safe_iget(double_vector , int )") +DoubleVector.cNamespace().iset = cwrapper.prototype("double double_vector_iset( double_vector , int , double)") +DoubleVector.cNamespace().size = cwrapper.prototype("int double_vector_size( double_vector )") +DoubleVector.cNamespace().append = cwrapper.prototype("void double_vector_append( double_vector , double )") +DoubleVector.cNamespace().idel_block = cwrapper.prototype("void double_vector_idel_block( double_vector , int , int )") +DoubleVector.cNamespace().pop = cwrapper.prototype("double double_vector_pop( double_vector )") +DoubleVector.cNamespace().idel = cwrapper.prototype("void double_vector_idel( double_vector , int )") +DoubleVector.cNamespace().lshift = cwrapper.prototype("void double_vector_lshift( double_vector , int )") +DoubleVector.cNamespace().rshift = cwrapper.prototype("void double_vector_rshift( double_vector , int )") +DoubleVector.cNamespace().insert = cwrapper.prototype("void double_vector_insert( double_vector , int , double)") +DoubleVector.cNamespace().fprintf = cwrapper.prototype("void double_vector_fprintf( double_vector , FILE , char* , char*)") +DoubleVector.cNamespace().sort = cwrapper.prototype("void double_vector_sort( double_vector )") +DoubleVector.cNamespace().rsort = cwrapper.prototype("void double_vector_rsort( double_vector )") +DoubleVector.cNamespace().reset = cwrapper.prototype("void double_vector_reset( double_vector )") +DoubleVector.cNamespace().get_read_only = cwrapper.prototype("bool double_vector_get_read_only( double_vector )") +DoubleVector.cNamespace().set_read_only = cwrapper.prototype("void double_vector_set_read_only( double_vector , bool )") +DoubleVector.cNamespace().get_max = cwrapper.prototype("double double_vector_get_max( double_vector )") +DoubleVector.cNamespace().get_min = cwrapper.prototype("double double_vector_get_min( double_vector )") +DoubleVector.cNamespace().get_max_index = cwrapper.prototype("int double_vector_get_max_index( double_vector , bool)") +DoubleVector.cNamespace().get_min_index = cwrapper.prototype("int double_vector_get_min_index( double_vector , bool)") +DoubleVector.cNamespace().shift = cwrapper.prototype("void double_vector_shift( double_vector , double )") +DoubleVector.cNamespace().scale = cwrapper.prototype("void double_vector_scale( double_vector , double )") +DoubleVector.cNamespace().div = cwrapper.prototype("void double_vector_div( double_vector , double )") +DoubleVector.cNamespace().inplace_add = cwrapper.prototype("void double_vector_inplace_add( double_vector , double_vector )") +DoubleVector.cNamespace().inplace_mul = cwrapper.prototype("void double_vector_inplace_mul( double_vector , double_vector )") +DoubleVector.cNamespace().assign = cwrapper.prototype("void double_vector_set_all( double_vector , double)") +DoubleVector.cNamespace().memcpy = cwrapper.prototype("void double_vector_memcpy(double_vector , double_vector )") +DoubleVector.cNamespace().set_default = cwrapper.prototype("void double_vector_set_default( double_vector , double)") +DoubleVector.cNamespace().get_default = cwrapper.prototype("double double_vector_get_default( double_vector )") +DoubleVector.cNamespace().element_size = cwrapper.prototype("int double_vector_element_size( double_vector )") + +DoubleVector.cNamespace().permute = cwrapper.prototype("void double_vector_permute(double_vector, permutation_vector)") +DoubleVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj double_vector_alloc_sort_perm(double_vector)") +DoubleVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj double_vector_alloc_rsort_perm(double_vector)") +DoubleVector.cNamespace().contains = cwrapper.prototype("bool double_vector_contains(double_vector, double)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py new file mode 100644 index 0000000000..285b9b860a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py @@ -0,0 +1,95 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'int_vector.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.cwrap import CWrapper +from ert.util import UTIL_LIB, VectorTemplate + + +class IntVector(VectorTemplate): + default_format = "%d" + + def __init__(self, default_value=0, initial_size=0): + super(IntVector, self).__init__(default_value, initial_size) + + @classmethod + def active_list(cls , range_string): + """ + Will create a IntVector instance with the values from @range_string. + + The range_string input should be of the type "1,3-5,9,17", + i.e. integer values separated by commas, and dashes to + represent ranges. If the input string contains ANY invalid + characters the returned active list will be empty: + + "1,4-7,10" => {1,4,5,6,7,10} + "1,4-7,10X" => {} + + The empty list will evaluate to false + """ + return cls.cNamespace().create_active_list(range_string) + + def count(self, value): + """ @rtype: int """ + return IntVector.cNamespace().count_equal(self, value) + +cwrapper = CWrapper(UTIL_LIB) +CWrapper.registerObjectType("int_vector", IntVector) + + +IntVector.cNamespace().alloc = cwrapper.prototype("c_void_p int_vector_alloc( int , int )") +IntVector.cNamespace().alloc_copy = cwrapper.prototype("int_vector_obj int_vector_alloc_copy( int_vector )") +IntVector.cNamespace().strided_copy = cwrapper.prototype("int_vector_obj int_vector_alloc_strided_copy( int_vector , int , int , int)") +IntVector.cNamespace().free = cwrapper.prototype("void int_vector_free( int_vector )") +IntVector.cNamespace().iget = cwrapper.prototype("int int_vector_iget( int_vector , int )") +IntVector.cNamespace().safe_iget = cwrapper.prototype("int int_vector_safe_iget( int_vector , int )") +IntVector.cNamespace().iset = cwrapper.prototype("int int_vector_iset( int_vector , int , int)") +IntVector.cNamespace().size = cwrapper.prototype("int int_vector_size( int_vector )") +IntVector.cNamespace().append = cwrapper.prototype("void int_vector_append( int_vector , int )") +IntVector.cNamespace().idel_block = cwrapper.prototype("void int_vector_idel_block( int_vector , int , int )") +IntVector.cNamespace().pop = cwrapper.prototype("int int_vector_pop( int_vector )") +IntVector.cNamespace().idel = cwrapper.prototype("void int_vector_idel( int_vector , int )") +IntVector.cNamespace().insert = cwrapper.prototype("void int_vector_insert( int_vector , int , int)") +IntVector.cNamespace().lshift = cwrapper.prototype("void int_vector_lshift( int_vector , int )") +IntVector.cNamespace().rshift = cwrapper.prototype("void int_vector_rshift( int_vector , int )") +IntVector.cNamespace().fprintf = cwrapper.prototype("void int_vector_fprintf( int_vector , FILE , char* , char*)") +IntVector.cNamespace().sort = cwrapper.prototype("void int_vector_sort( int_vector )") +IntVector.cNamespace().rsort = cwrapper.prototype("void int_vector_rsort( int_vector )") +IntVector.cNamespace().reset = cwrapper.prototype("void int_vector_reset( int_vector )") +IntVector.cNamespace().set_read_only = cwrapper.prototype("void int_vector_set_read_only( int_vector , bool )") +IntVector.cNamespace().get_read_only = cwrapper.prototype("bool int_vector_get_read_only( int_vector )") +IntVector.cNamespace().get_max = cwrapper.prototype("int int_vector_get_max( int_vector )") +IntVector.cNamespace().get_min = cwrapper.prototype("int int_vector_get_min( int_vector )") +IntVector.cNamespace().get_max_index = cwrapper.prototype("int int_vector_get_max_index( int_vector , bool)") +IntVector.cNamespace().get_min_index = cwrapper.prototype("int int_vector_get_min_index( int_vector , bool)") +IntVector.cNamespace().shift = cwrapper.prototype("void int_vector_shift( int_vector , int )") +IntVector.cNamespace().scale = cwrapper.prototype("void int_vector_scale( int_vector , int )") +IntVector.cNamespace().div = cwrapper.prototype("void int_vector_div( int_vector , int )") +IntVector.cNamespace().inplace_add = cwrapper.prototype("void int_vector_inplace_add( int_vector , int_vector )") +IntVector.cNamespace().inplace_mul = cwrapper.prototype("void int_vector_inplace_mul( int_vector , int_vector )") +IntVector.cNamespace().assign = cwrapper.prototype("void int_vector_set_all( int_vector , int)") +IntVector.cNamespace().memcpy = cwrapper.prototype("void int_vector_memcpy(int_vector , int_vector )") +IntVector.cNamespace().set_default = cwrapper.prototype("void int_vector_set_default( int_vector , int)") +IntVector.cNamespace().get_default = cwrapper.prototype("int int_vector_get_default( int_vector )") +IntVector.cNamespace().element_size = cwrapper.prototype("int int_vector_element_size( int_vector )") +IntVector.cNamespace().count_equal = cwrapper.prototype("int int_vector_count_equal( int_vector, int)") +IntVector.cNamespace().create_active_list = cwrapper.prototype("int_vector_obj string_util_alloc_active_list( char* )") + +IntVector.cNamespace().permute = cwrapper.prototype("void int_vector_permute(int_vector, permutation_vector)") +IntVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj int_vector_alloc_sort_perm(int_vector)") +IntVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj int_vector_alloc_rsort_perm(int_vector)") +IntVector.cNamespace().contains = cwrapper.prototype("bool int_vector_contains(int_vector, int)") + + diff --git a/ThirdParty/Ert/devel/python/python/ert/util/matrix.py b/ThirdParty/Ert/devel/python/python/ert/util/matrix.py index 1a9c8b8695..7b8572b432 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/matrix.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/matrix.py @@ -32,30 +32,65 @@ class Matrix(BaseCClass): - def __init__(self, rows, columns): - self.__rows = rows - self.__columns = columns + def __init__(self, rows, columns , value = 0): c_ptr = Matrix.cNamespace().matrix_alloc(rows, columns) super(Matrix, self).__init__(c_ptr) + self.setAll(value) + def __getitem__(self, index_tuple): - if not 0 <= index_tuple[0] < self.__rows: - raise IndexError("Expected 0 <= %d < %d" % (index_tuple[0], self.__rows)) + if not 0 <= index_tuple[0] < self.rows(): + raise IndexError("Expected 0 <= %d < %d" % (index_tuple[0], self.rows())) - if not 0 <= index_tuple[1] < self.__columns: - raise IndexError("Expected 0 <= %d < %d" % (index_tuple[1], self.__columns)) + if not 0 <= index_tuple[1] < self.columns(): + raise IndexError("Expected 0 <= %d < %d" % (index_tuple[1], self.columns())) return Matrix.cNamespace().iget(self, index_tuple[0], index_tuple[1]) + def __setitem__(self, index_tuple, value): - if not 0 <= index_tuple[0] < self.__rows: - raise IndexError("Expected 0 <= %d < %d" % (index_tuple[0], self.__rows)) + if not 0 <= index_tuple[0] < self.rows(): + raise IndexError("Expected 0 <= %d < %d" % (index_tuple[0], self.rows())) - if not 0 <= index_tuple[1] < self.__columns: - raise IndexError("Expected 0 <= %d < %d" % (index_tuple[1], self.__columns)) + if not 0 <= index_tuple[1] < self.columns(): + raise IndexError("Expected 0 <= %d < %d" % (index_tuple[1], self.columns())) return Matrix.cNamespace().iset(self, index_tuple[0], index_tuple[1], value) + + def rows(self): + """ @rtype: int """ + return Matrix.cNamespace().rows(self) + + + def columns(self): + """ @rtype: int """ + return Matrix.cNamespace().columns(self) + + + def __eq__(self, other): + assert isinstance(other, Matrix) + return Matrix.cNamespace().equal(self, other) + + def scaleColumn(self, column , factor): + if not 0 <= column < self.columns(): + raise IndexError("Expected column: [0,%d) got:%d" % (self.columns() , column)) + Matrix.cNamespace().scale_column(self , column , factor) + + def scaleRow(self, row , factor): + if not 0 <= row < self.rows(): + raise IndexError("Expected row: [0,%d) got:%d" % (self.rows() , row)) + Matrix.cNamespace().scale_row(self , row , factor) + + + def setAll(self , value): + Matrix.cNamespace().set_all(self, value) + + + def prettyPrint(self, name, fmt="%6.3g"): + Matrix.cNamespace().pretty_print(self, name, fmt) + + def free(self): Matrix.cNamespace().free(self) @@ -71,5 +106,14 @@ def free(self): Matrix.cNamespace().free = cwrapper.prototype("void matrix_free(matrix)") Matrix.cNamespace().iget = cwrapper.prototype("double matrix_iget( matrix , int , int )") Matrix.cNamespace().iset = cwrapper.prototype("void matrix_iset( matrix , int , int , double)") - +Matrix.cNamespace().set_all = cwrapper.prototype("void matrix_scalar_set( matrix , double)") +Matrix.cNamespace().scale_column = cwrapper.prototype("void matrix_scale_column(matrix , int , double)") +Matrix.cNamespace().scale_row = cwrapper.prototype("void matrix_scale_row(matrix , int , double)") + +Matrix.cNamespace().rows = cwrapper.prototype("int matrix_get_rows(matrix)") +Matrix.cNamespace().columns = cwrapper.prototype("int matrix_get_columns(matrix)") +Matrix.cNamespace().equal = cwrapper.prototype("bool matrix_equal(matrix, matrix)") + +Matrix.cNamespace().pretty_print = cwrapper.prototype("void matrix_pretty_print(matrix, char*, char*)") + diff --git a/ThirdParty/Ert/devel/python/python/ert/util/stringlist.py b/ThirdParty/Ert/devel/python/python/ert/util/stringlist.py index 611eb53a65..15591bf901 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/stringlist.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/stringlist.py @@ -39,7 +39,7 @@ class StringList(BaseCClass): - def __init__( self, initial=None): + def __init__(self, initial=None): """ Creates a new stringlist instance. @@ -66,7 +66,7 @@ def __init__( self, initial=None): if isinstance(s, StringType): self.append(s) else: - raise TypeError("Item:%s not a string" % s) + raise TypeError("Item: %s not a string" % s) def __setitem__(self, index, value): @@ -74,14 +74,14 @@ def __setitem__(self, index, value): length = self.__len__() if index < 0: # Will only wrap backwards once - index = self.size() + index + index = len(self) + index if index < 0 or index >= length: - raise IndexError + raise IndexError("index must be in range %d <= %d < %d" % (0, index, len(self))) if isinstance(value, StringType): StringList.cNamespace().iset(self, index, value) else: - raise TypeError("Item:%s not string type" % value) + raise TypeError("Item: %s not string type" % value) def __getitem__(self, index): @@ -96,7 +96,7 @@ def __getitem__(self, index): if index < 0: index += length if index < 0 or index >= length: - raise IndexError + raise IndexError("index must be in range %d <= %d < %d" % (0, index, len(self))) else: return StringList.cNamespace().iget(self, index) else: @@ -182,7 +182,7 @@ def last(self): """ Will return the last element in list. Raise IndexError if empty. """ - if len(self): + if len(self) > 0: return StringList.cNamespace().last(self) else: raise IndexError("The list is empty") @@ -212,35 +212,34 @@ def free(self): def front(self): - if self.__len__() > 0: + if len(self) > 0: return StringList.cNamespace().front(self) else: raise IndexError def back(self): - if self.__len__() > 0: + if len(self) > 0: return StringList.cNamespace().back(self) else: raise IndexError -CWrapper.registerType("stringlist", StringList) -CWrapper.registerType("stringlist_obj", StringList.createPythonObject) -CWrapper.registerType("stringlist_ref", StringList.createCReference) +CWrapper.registerObjectType("stringlist", StringList) + cwrapper = CWrapper(UTIL_LIB) -StringList.cNamespace().alloc = cwrapper.prototype("c_void_p stringlist_alloc_new( )") -StringList.cNamespace().free = cwrapper.prototype("void stringlist_free( stringlist )") -StringList.cNamespace().append = cwrapper.prototype("void stringlist_append_copy( stringlist , char* )") -StringList.cNamespace().iget = cwrapper.prototype("char* stringlist_iget( stringlist , int )") -StringList.cNamespace().front = cwrapper.prototype("char* stringlist_front( stringlist )") -StringList.cNamespace().back = cwrapper.prototype("char* stringlist_back( stringlist )") -StringList.cNamespace().iget_copy = cwrapper.prototype("char* stringlist_iget_copy(stringlist, int)") -StringList.cNamespace().iset = cwrapper.prototype("void stringlist_iset_copy( stringlist , int , char* )") -StringList.cNamespace().get_size = cwrapper.prototype("int stringlist_get_size( stringlist )") -StringList.cNamespace().contains = cwrapper.prototype("bool stringlist_contains(stringlist , char*)") -StringList.cNamespace().sort = cwrapper.prototype("void stringlist_python_sort( stringlist , int)") -StringList.cNamespace().pop = cwrapper.safe_prototype("char* stringlist_pop( stringlist )") -StringList.cNamespace().last = cwrapper.safe_prototype("char* stringlist_get_last( stringlist )") -StringList.cNamespace().find_first = cwrapper.safe_prototype("int stringlist_find_first(stringlist, char*)") +StringList.cNamespace().alloc = cwrapper.prototype("c_void_p stringlist_alloc_new( )") +StringList.cNamespace().free = cwrapper.prototype("void stringlist_free(stringlist )") +StringList.cNamespace().append = cwrapper.prototype("void stringlist_append_copy(stringlist , char* )") +StringList.cNamespace().iget = cwrapper.prototype("char* stringlist_iget(stringlist , int )") +StringList.cNamespace().front = cwrapper.prototype("char* stringlist_front( stringlist )") +StringList.cNamespace().back = cwrapper.prototype("char* stringlist_back( stringlist )") +StringList.cNamespace().iget_copy = cwrapper.prototype("char* stringlist_iget_copy(stringlist, int)") +StringList.cNamespace().iset = cwrapper.prototype("void stringlist_iset_copy( stringlist , int , char* )") +StringList.cNamespace().get_size = cwrapper.prototype("int stringlist_get_size( stringlist )") +StringList.cNamespace().contains = cwrapper.prototype("bool stringlist_contains(stringlist , char*)") +StringList.cNamespace().sort = cwrapper.prototype("void stringlist_python_sort( stringlist , int)") +StringList.cNamespace().pop = cwrapper.prototype("char* stringlist_pop(stringlist)") +StringList.cNamespace().last = cwrapper.prototype("char* stringlist_get_last(stringlist)") +StringList.cNamespace().find_first = cwrapper.prototype("int stringlist_find_first(stringlist, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/thread_pool.py b/ThirdParty/Ert/devel/python/python/ert/util/thread_pool.py new file mode 100644 index 0000000000..fa5597398a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/thread_pool.py @@ -0,0 +1,151 @@ +import multiprocessing +from threading import Thread +import time +import traceback + + +class Task(Thread): + def __init__(self, func, *args, **kwargs): + super(Task, self).__init__() + self.__func = func + self.__args = args + self.__kwargs = kwargs + + self.__started = False + self.__done = False + self.__failed = False + self.__start_time = None + + self.__verbose = False + + def setVerbose(self, verbose): + self.__verbose = verbose + + def run(self): + self.__start_time = time.time() + self.__started = True + try: + self.__func(*self.__args, **self.__kwargs) + except Exception: + self.__failed = True + traceback.print_exc() + finally: + self.__done = True + + if self.__verbose: + running_time = time.time() - self.__start_time + print("Running time of task: %f" % running_time) + + def isDone(self): + return self.__done + + def hasStarted(self): + return self.__started or self.isAlive() + + def isRunning(self): + return self.hasStarted() and not self.__done + + def hasFailed(self): + return self.__failed + + def join(self, timeout=None): + while not self.hasStarted() or self.isRunning(): + time.sleep(0.01) + + + +class ThreadPool(object): + + def __init__(self, size=None, verbose=False): + super(ThreadPool, self).__init__() + + if size is None: + size = multiprocessing.cpu_count() + + self.__size = size + self.__task_list = [] + self.__pool_finished = False + self.__runner_thread = None + self.__verbose = verbose + self.__start_time = None + + + def addTask(self, func, *args, **kwargs): + if self.__start_time is None: + task = Task(func, *args, **kwargs) + # task.setVerbose(self.__verbose) + self.__task_list.append(task) + else: + raise UserWarning("Can not add task after the pool has started!") + + def poolSize(self): + return self.__size + + def taskCount(self): + return len(self.__task_list) + + def __allTasksFinished(self): + for task in self.__task_list: + if not task.isDone(): + return False + + return True + + def runningCount(self): + count = 0 + + for task in self.__task_list: + if task.isRunning(): + count += 1 + + return count + + def doneCount(self): + count = 0 + + for task in self.__task_list: + if task.isDone(): + count += 1 + + return count + + def __findNextTask(self): + for task in self.__task_list: + if not task.hasStarted(): + return task + + return None + + def __start(self): + while not self.__allTasksFinished(): + if self.runningCount() < self.poolSize(): + task = self.__findNextTask() + + if task is not None: + task.start() + + time.sleep(0.001) + + self.__pool_finished = True + + + def nonBlockingStart(self): + self.__runner_thread = Thread() + self.__runner_thread.run = self.__start + self.__runner_thread.start() + self.__start_time = time.time() + + def join(self): + while not self.__pool_finished: + time.sleep(0.001) + + if self.__verbose: + running_time = time.time() - self.__start_time + print("Running time: %f using a pool size of: %d" % (running_time, self.poolSize())) + + def hasFailedTasks(self): + for task in self.__task_list: + if task.hasFailed(): + return True + + return False diff --git a/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py new file mode 100644 index 0000000000..9a0df649dc --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py @@ -0,0 +1,181 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'vector_template.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import re +import datetime +import sys + +from ert.cwrap import CWrapper +from ert.util import UTIL_LIB, VectorTemplate, CTime + + +class TimeVector(VectorTemplate): + default_format = "%d" + + def __init__(self, default_value=None, initial_size=0): + if default_value is None: + super(TimeVector, self).__init__(CTime(0), initial_size) + else: + try: + default = CTime( default_value ) + except: + raise ValueError("default value invalid - must be type ctime() or date/datetime") + + super(TimeVector, self).__init__(default , initial_size) + + + @classmethod + def parseTimeUnit(cls , deltaString): + deltaRegexp = re.compile("(?P\d*)(?P[dmy])" , re.IGNORECASE) + matchObj = deltaRegexp.match( deltaString ) + if matchObj: + try: + num = int(matchObj.group("num")) + except: + num = 1 + + timeUnit = matchObj.group("unit").lower() + return (num , timeUnit) + else: + raise TypeError("The delta string must be on form \'1d\', \'2m\', \'Y\' for one day, two months or one year respectively") + + + def __str__(self): + """ + Returns string representantion of vector. + """ + string_list = [] + for d in self: + string_list.append( "%s" % d ) + + return str(string_list) + + + def append(self, value): + self.cNamespace().append(self, CTime(value)) + + def __contains__(self , value): + return self.cNamespace().contains(self , CTime(value)) + + + def nextTime(self , num , timeUnit ): + currentTime = self[-1].datetime() + hour = currentTime.hour + minute = currentTime.minute + second = currentTime.second + + if timeUnit == "d": + td = datetime.timedelta( days = num ) + currentTime += td + else: + day = currentTime.day + month = currentTime.month + year = currentTime.year + + if timeUnit == "y": + year += num + else: + month += num - 1 + (deltaYear , newMonth) = divmod( month , 12 ) + month = newMonth + 1 + year += deltaYear + currentTime = datetime.datetime(year , month , day , hour , minute , second ) + + return currentTime + + + def appendTime(self , num , timeUnit): + next = self.nextTime( num , timeUnit ) + self.append( CTime(next) ) + + + + @classmethod + def createRegular(cls , start , end , deltaString): + """ + The last element in the vector will be <= end; i.e. if the + question of whether the range is closed in the upper end + depends on the commensurability of the [start,end] interval + and the delta: + + createRegular(0 , 10 , delta=3) => [0,3,6,9] + createRegular(0 , 10 , delta=2) => [0,2,4,6,8,10] + """ + start = CTime( start ) + end = CTime( end ) + if start > end: + raise ValueError("The time interval is invalid start is after end") + + (num , timeUnit) = cls.parseTimeUnit( deltaString ) + + timeVector = TimeVector() + currentTime = start + while currentTime <= end: + ct = CTime( currentTime ) + timeVector.append( ct ) + currentTime = timeVector.nextTime( num , timeUnit ) + + return timeVector + + + + +################################################################# + +cwrapper = CWrapper(UTIL_LIB) + +CWrapper.registerObjectType("time_t_vector", TimeVector) + + +TimeVector.cNamespace().alloc = cwrapper.prototype("c_void_p time_t_vector_alloc(int, time_t )") +TimeVector.cNamespace().alloc_copy = cwrapper.prototype("time_t_vector_obj time_t_vector_alloc_copy(time_t_vector )") +TimeVector.cNamespace().strided_copy = cwrapper.prototype("time_t_vector_obj time_t_vector_alloc_strided_copy(time_t_vector , time_t , time_t , time_t)") +TimeVector.cNamespace().free = cwrapper.prototype("void time_t_vector_free( time_t_vector )") +TimeVector.cNamespace().iget = cwrapper.prototype("time_t time_t_vector_iget( time_t_vector , int )") +TimeVector.cNamespace().safe_iget = cwrapper.prototype("time_t time_t_vector_safe_iget( time_t_vector , int )") +TimeVector.cNamespace().iset = cwrapper.prototype("time_t time_t_vector_iset( time_t_vector , int , time_t)") +TimeVector.cNamespace().size = cwrapper.prototype("int time_t_vector_size( time_t_vector )") +TimeVector.cNamespace().append = cwrapper.prototype("void time_t_vector_append( time_t_vector , time_t )") +TimeVector.cNamespace().idel_block = cwrapper.prototype("void time_t_vector_idel_block( time_t_vector , int , int )") +TimeVector.cNamespace().idel = cwrapper.prototype("void time_t_vector_idel( time_t_vector , int )") +TimeVector.cNamespace().pop = cwrapper.prototype("time_t time_t_vector_pop( time_t_vector )") +TimeVector.cNamespace().lshift = cwrapper.prototype("void time_t_vector_lshift( time_t_vector , int )") +TimeVector.cNamespace().rshift = cwrapper.prototype("void time_t_vector_rshift( time_t_vector , int )") +TimeVector.cNamespace().insert = cwrapper.prototype("void time_t_vector_insert( time_t_vector , int , time_t)") +TimeVector.cNamespace().fprintf = cwrapper.prototype("void time_t_vector_fprintf( time_t_vector , FILE , char* , char*)") +TimeVector.cNamespace().sort = cwrapper.prototype("void time_t_vector_sort( time_t_vector )") +TimeVector.cNamespace().rsort = cwrapper.prototype("void time_t_vector_rsort( time_t_vector )") +TimeVector.cNamespace().reset = cwrapper.prototype("void time_t_vector_reset( time_t_vector )") +TimeVector.cNamespace().set_read_only = cwrapper.prototype("void time_t_vector_set_read_only( time_t_vector , bool )") +TimeVector.cNamespace().get_read_only = cwrapper.prototype("bool time_t_vector_get_read_only( time_t_vector )") +TimeVector.cNamespace().get_max = cwrapper.prototype("time_t time_t_vector_get_max( time_t_vector )") +TimeVector.cNamespace().get_min = cwrapper.prototype("time_t time_t_vector_get_min( time_t_vector )") +TimeVector.cNamespace().get_max_index = cwrapper.prototype("int time_t_vector_get_max_index( time_t_vector , bool)") +TimeVector.cNamespace().get_min_index = cwrapper.prototype("int time_t_vector_get_min_index( time_t_vector , bool)") +TimeVector.cNamespace().shift = cwrapper.prototype("void time_t_vector_shift( time_t_vector , time_t )") +TimeVector.cNamespace().scale = cwrapper.prototype("void time_t_vector_scale( time_t_vector , time_t )") +TimeVector.cNamespace().div = cwrapper.prototype("void time_t_vector_div( time_t_vector , time_t )") +TimeVector.cNamespace().inplace_add = cwrapper.prototype("void time_t_vector_inplace_add( time_t_vector , time_t_vector )") +TimeVector.cNamespace().inplace_mul = cwrapper.prototype("void time_t_vector_inplace_mul( time_t_vector , time_t_vector )") +TimeVector.cNamespace().assign = cwrapper.prototype("void time_t_vector_set_all( time_t_vector , time_t)") +TimeVector.cNamespace().memcpy = cwrapper.prototype("void time_t_vector_memcpy(time_t_vector , time_t_vector )") +TimeVector.cNamespace().set_default = cwrapper.prototype("void time_t_vector_set_default( time_t_vector , time_t)") +TimeVector.cNamespace().get_default = cwrapper.prototype("time_t time_t_vector_get_default( time_t_vector )") +TimeVector.cNamespace().element_size = cwrapper.prototype("int time_t_vector_element_size( time_t_vector )") + +TimeVector.cNamespace().permute = cwrapper.prototype("void time_t_vector_permute(time_t_vector, permutation_vector)") +TimeVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj time_t_vector_alloc_sort_perm(time_t_vector)") +TimeVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj time_t_vector_alloc_rsort_perm(time_t_vector)") +TimeVector.cNamespace().contains = cwrapper.prototype("bool time_t_vector_contains(time_t_vector, time_t)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/tvector.py b/ThirdParty/Ert/devel/python/python/ert/util/tvector.py deleted file mode 100644 index 1086314943..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/util/tvector.py +++ /dev/null @@ -1,753 +0,0 @@ -# Copyright (C) 2011 Statoil ASA, Norway. -# -# The file 'tvector.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. -""" -Typed vectors IntVector, DoubleVector and BoolVector. - -This module implements a quite simple typed vector which will grow -transparently as needed. The vector is created with a default value, -which will be used for not explicitly set indices. - - vec = IntVector( default_value = 66 ) - vec[0] = 10 - vec[2] = 10 - -After the 'vec[2] = 10' statement the vector has grown to contain -three elements. The element vec[1] has not been explicitly assigned by -the user, in that case the implementation has 'filled the hole' with -the default value (i.e. 66 in this case). So the statement - - print vec[1] - -will give '66'. The main part of the implementation is in terms of an -"abstract base class" TVector. The TVector class should be not -instantiated directly, instead the child classes IntVector, -DoubleVector or BoolVector should be used. - -The C-level has implementations for several fundamental types like -float and size_t not currently implemented in the Python version. -""" - -import sys -from types import IntType, SliceType -import ctypes -import numpy - -from ert.cwrap import CWrapper, CFILE, BaseCClass -from ert.util import UTIL_LIB, ctime - - - - -#TVector takes advantage of the fact that self.cNamespace belongs to the inheriting class -class TVector(BaseCClass): - - @classmethod - def strided_copy( cls , obj , slice_range ): - """ - Will create a new copy according to @slice. - - Mainly a support function to support slice based lookup like - - v = IntVector() - v[0] = 1 - v[1] = 1 - v[100] = 100 - ... - c = v[0:100:10] - - Now 'c' will be a Intvector() instance containing every tenth - element from 'v'. - """ - (start , stop , step) = slice_range.indices( obj.size ) - if stop > start: - return cls.cNamespace().strided_copy(obj, start, stop, step) - else: - return None - - - @classmethod - def __copy__( cls , obj ): - return cls.cNamespace().alloc_copy(obj) - - - def copy( self ): - """ - Create a new copy of the current vector. - """ - new = self.__copy__( self ) # Invoking the class method - return new - - - def __deepcopy__(self , memo): - new = self.copy( ) - return new - - def __init__(self, default_value = 0, initial_size = 0): - """ - Creates a new TVector instance. - """ - c_pointer = self.cNamespace().alloc(initial_size, default_value) - super(TVector, self).__init__(c_pointer) - self.element_size = self.cNamespace().element_size( self ) - - - def str_data( self , width , index1 , index2 , fmt): - """ - Helper function for str() method. - """ - data = [] - s = "" - for index in range(index1, index2): - data.append( self[index] ) - for index in range(len(data)): - s += fmt % data[ index ] - if index % width == (width - 1): - s+= "\n" - return s - - - # The str() method is a verbatim copy of the implementation in - # ecl_kw.py. - def str(self , width = 5 , max_lines = 10 , fmt = None): - """ - Return string representation of vector for pretty printing. - - The function will return a string consisting of a header, and - then a chunk of data. The data will be formatted in @width - columns, and a maximum of @max_lines lines. If @max_lines is - not sufficient the first elements in the kewyord are - represented, a .... continuation line and then the last part - of the vector. If @max_lines is None all of the vector will be - printed, irrespectiv of how long it is. - - If a value is given for @fmt that is used as format string for - each element, otherwise a type-specific default format is - used. If given the @fmt string should contain spacing between - the elements. The implementation of the builtin method - __str__() is based on this method. - """ - - s = "" - lines = self.size / width - if not fmt: - fmt = self.default_format + " " - - if max_lines is None or lines <= max_lines: - s += self.str_data( width , 0 , self.size , fmt) - else: - s1 = width * max_lines / 2 - s += self.str_data( width , 0 , s1 , fmt) - s += " .... \n" - s += self.str_data( width , self.size - s1 , self.size , fmt) - - return s - - def __str__(self): - """ - Returns string representantion of vector. - """ - return self.str( max_lines = 10 , width = 5 ) - - - - def __getitem__(self, index ): - """ - Implements read [] operator - @index can be slice instance. - """ - if isinstance( index , IntType): - length = self.__len__() - if index < 0: - index += length - - if index < 0 or index >= length: - raise IndexError - else: - return self.cNamespace().iget( self , index ) - elif isinstance( index , SliceType ): - return self.strided_copy( self , index ) - else: - raise TypeError("Index should be integer or slice type.") - - def __setitem__( self , index , value ): - """ - Implements write [] operator - @index must be integer. - """ - if isinstance( index , IntType): - self.cNamespace().iset( self, index , value ) - else: - raise TypeError("Index should be integer type") - - ################################################################## - # Mathematical operations: - - def __IADD__(self , delta , add ): - """ - Low-level function implementing inplace add. - - The __IADD__ function implements the operation: - - v += a - - The variable which is added, i.e. @delta, can either be of the - same type as the current instance, or a numerical scalar. The - __IADD__ method implements both add and subtract, based on the - boolean flag @add. - - The __IADD__ method should not be called directly; but rather - via the __iadd__, __add__ and __radd__ methods which implement - the various addition operation, and the corresponding - subtraction operations: __isub__, __sub__ and __rsub__. - """ - if type(self) == type(delta): - if self.size == delta.size: - # This is vector + vector operation. - if not add: - self.cNamespace().scale( delta , -1 ) - self.cNamespace().inplace_add( self , delta ) - else: - raise ValueError("Incompatible sizes for add self:%d other:%d" % (self.size , delta.size)) - else: - if isinstance( delta , int ) or isinstance( delta, float): - if not add: - delta *= -1 - self.cNamespace().shift( self , delta ) - else: - raise TypeError("delta has wrong type:%s " % type(delta)) - - return self - - # the __IMUL__ function only implements multiplication. - def __IMUL__(self , factor ): - """ - Low-level function implementing inplace multiplication. - - The __IMUL__ function implements the operation: - - v *= a - - The variable which is multiplied in, i.e. @factor, can either - be of the same type as the current instance, or a numerical - scalar. The __IMUL__ method should not be called directly, but - rather via the __mul__, __imul__ and __rmul__ functions. - """ - - if type(self) == type(factor): - # This is vector * vector operation. - if self.size == factor.size: - self.cNamespace().inplace_mul( self , factor ) - else: - raise ValueError("Incompatible sizes for mul self:%d other:%d" % (self.size , factor.size)) - else: - if isinstance( factor , int ) or isinstance( factor, float): - self.cNamespace().scale( self , factor ) - else: - raise TypeError("factor has wrong type:%s " % type(factor)) - - return self - - - def __iadd__(self , delta ): - """ - Implements inplace add. @delta can be vector or scalar. - """ - return self.__IADD__( delta , True ) - - def __isub__(self , delta): - """ - Implements inplace subtract. @delta can be vector or scalar. - """ - return self.__IADD__(delta , False ) - - def __radd__(self , delta): - return self.__add__( delta ) - - def __add__(self , delta): - """ - Implements add operation - creating a new copy. - - b = DoubleVector() - c = DoubleVector() // Or alternatively scalar - .... - a = b + c - """ - copy = self.__copy__( self ) - copy += delta - return copy - - def __sub__(self , delta): - """ - Implements subtraction - creating new copy. - """ - copy = self.__copy__( self ) - copy -= delta - return copy - - def __rsub__( self , delta): - return self.__sub__( delta ) * -1 - - def __imul__(self , factor ): - return self.__IMUL__( factor ) - - def __mul__( self , factor ): - copy = self.__copy__( self ) - copy *= factor - return copy - - def __rmul__(self , factor): - return self.__mul__( factor ) - - - def __div__(self , divisor): - if isinstance( divisor , int ) or isinstance( divisor , float): - copy = self.__copy__( self ) - copy.cNamespace().div( copy , divisor ) - return copy - else: - raise TypeError("Divisor has wrong type:%s" % type( divisor )) - - # No __rdiv__() - - - # End mathematical operations - ################################################################# - - # Essentally implements a = b - def assign(self , value): - """ - Implements assignment of type a = b. - - The @value parameter can either be a vector instance, in which - case the content of @value is copied into the current - instance, or a scalar in which case all the elements of the - vector are set to this value: - - v1 = IntVector() - v2 = IntVector() - - v1[10] = 77 - v2.assign( v1 ) # Now v2 contains identicall content to v1 - .... - v1.assign( 66 ) # Now v1 is a vector of 11 elements - all equal to 66 - - """ - if type(self) == type(value): - # This is a copy operation - self.cNamespace().memcpy( self , value ) - else: - if isinstance( value , int ) or isinstance( value, float): - self.cNamespace().assign( self , value ) - else: - raise TypeError("Value has wrong type") - - def __len__(self): - """ - The number of elements in the vector. - """ - return self.cNamespace().size( self ) - - - def printf( self , fmt = None , name = None , stream = sys.stdout ): - """ - See also the str() method which returns string representantion - of the vector. - """ - cfile = CFILE( stream ) - if not fmt: - fmt = self.default_format - self.cNamespace().fprintf(self , cfile , name , fmt) - - @property - def size( self ): - """ - The number of elements in the vector. - """ - return self.__len__() - - @property - def max( self ): - if self.cNamespace().size( self ) > 0: - return self.cNamespace().get_max( self ) - else: - raise IndexError - - @property - def min( self ): - if self.cNamespace().size( self ) > 0: - return self.cNamespace().get_min( self ) - else: - raise IndexError - - - def min_index( self , reverse = False ): - if self.cNamespace().size( self ) > 0: - return self.cNamespace().get_min_index( self , reverse ) - else: - raise IndexError - - def max_index( self , reverse = False ): - if self.cNamespace().size( self ) > 0: - return self.cNamespace().get_max_index( self , reverse ) - else: - raise IndexError - - def append( self , value ): - self.cNamespace().append( self , value ) - - def del_block( self , index , block_size ): - """ - Remove a block of size @block_size starting at @index. - - After the removal data will be left shifted. - """ - self.cNamespace().idel_block( self , index , block_size ) - - def sort( self ): - """ - Sort the vector inplace in increasing numerical order. - """ - self.cNamespace().sort( self ) - - def rsort( self ): - """ - Sort the vector inplace in reverse (decreasing) numerical order. - """ - self.cNamespace().rsort( self ) - - def clear(self): - self.cNamespace().reset( self ) - - def safe_iget( self , index): - return self.cNamespace().safe_iget( self , index ) - - def set_read_only( self , read_only ): - self.cNamespace().set_read_only( self , read_only ) - - def get_read_only( self ): - return self.cNamespace().get_read_only( self ) - - read_only = property( get_read_only , set_read_only ) - - def set_default( self , value ): - self.cNamespace().set_default( self , value ) - - def get_default( self ): - return self.cNamespace().get_default( self ) - - default = property( get_default , set_default ) - - - def free(self): - self.cNamespace().free(self) - - # The numpy_copy() method goes thorugh a bit of hoops to get the - # memory ownership correct: - # - # 1. A numpy array (view) is created which wraps the underlying - # storage of the vector instance. - # - # 2. A new numpy copy is created from the view and returned. - # - # The point of this involved exercise is to ensure that the numpy - # copy has it's own storage copy[1], and to ensure that the numpy - # storage is disposed correctly when the numpy vector is garbage - # collected. - # - # 1: The underlying storage of the vector instance is quite - # volatile, and it is not possible to create a numpy instance - # which safely shares storage with the vector. - - def numpy_copy(self): - """ - Will return a copy of the vector as a numpy array. - - The returned numpy copy is a true copy, and does not share any - storage with the vector instance. - """ - data_ptr = self.cNamespace().data_ptr( self ) - buffer_size = self.size * self.element_size - buffer = buffer_from_ptr( data_ptr , buffer_size ) - view = numpy.frombuffer( buffer , self.numpy_dtype ) - return numpy.copy( view ) - - -################################################################# - -# The ctypes type system with CWrapper.registerType() needs access to -# the wrapper object class definitions, and the warpper objects need -# access to the cfunc.xxxx function objects; that is the reason we -# invoke the ugly cls.initialized flag. - -class DoubleVector(TVector): - default_format = "%8.4f" - - def __init__(self, default_value=0, initial_size=0): - super(DoubleVector, self).__init__(default_value, initial_size) - - -class BoolVector(TVector): - default_format = "%8d" - - def __init__(self, default_value=0, initial_size=0): - super(BoolVector, self).__init__(default_value, initial_size) - - @classmethod - def active_mask(cls, range_string): - """ - Will create a BoolVector instance with the values from @range_string. - - The range_string input should be of the type "1,3-5,9,17", - i.e. integer values separated by commas, and dashes to - represent ranges. If the input string contains ANY invalid - characters the returned active list will be empty: - - "1,4-7,10" => {F,T,F,F,T,T,T,T,F,F,T} - "1,4-7,10X" => {} - - The empty list will evaluate to false - @rtype: BoolVector - """ - return cls.cNamespace().create_active_mask(range_string) - - @classmethod - def updateActiveMask(cls, range_string, bool_vector): - """ - Updates a bool vector based on a range string. - @type range_string: str - @type bool_vector: BoolVector - @rtype: bool - """ - return cls.cNamespace().update_active_mask(range_string, bool_vector) - - @classmethod - def createFromList(cls, size, source_list): - """Allocates a bool vector from a Python list of indexes""" - bool_vector = BoolVector(False, size) - - for index in source_list: - index = int(index) - bool_vector[index] = True - - return bool_vector - - - - - - -class IntVector(TVector): - default_format = "%d" - - def __init__(self, default_value=0, initial_size=0): - super(IntVector, self).__init__(default_value, initial_size) - - @classmethod - def active_list(cls , range_string): - """ - Will create a IntVector instance with the values from @range_string. - - The range_string input should be of the type "1,3-5,9,17", - i.e. integer values separated by commas, and dashes to - represent ranges. If the input string contains ANY invalid - characters the returned active list will be empty: - - "1,4-7,10" => {1,4,5,6,7,10} - "1,4-7,10X" => {} - - The empty list will evaluate to false - """ - return cls.cNamespace().create_active_list(range_string) - - - -class TimeVector(TVector): - default_format = "%d" - - def __init__(self, default_value=0, initial_size=0): - super(TimeVector, self).__init__(default_value, initial_size) - - -################################################################# - -buffer_from_ptr = ctypes.pythonapi.PyBuffer_FromMemory -buffer_from_ptr.restype = ctypes.py_object -buffer_from_ptr.argtypes = [ ctypes.c_void_p , ctypes.c_long ] - -CWrapper.registerType("double_vector", DoubleVector) -CWrapper.registerType("double_vector_obj", DoubleVector.createPythonObject) -CWrapper.registerType("double_vector_ref", DoubleVector.createCReference) - -CWrapper.registerType("int_vector", IntVector) -CWrapper.registerType("int_vector_obj", IntVector.createPythonObject) -CWrapper.registerType("int_vector_ref", IntVector.createCReference) - -CWrapper.registerType("bool_vector", BoolVector) -CWrapper.registerType("bool_vector_obj", BoolVector.createPythonObject) -CWrapper.registerType("bool_vector_ref", BoolVector.createCReference) - -CWrapper.registerType("time_t_vector", TimeVector) -CWrapper.registerType("time_t_vector_obj", TimeVector.createPythonObject) -CWrapper.registerType("time_t_vector_ref", TimeVector.createCReference) - - -cwrapper = CWrapper(UTIL_LIB) - - - -DoubleVector.cNamespace().alloc = cwrapper.prototype("c_void_p double_vector_alloc( int , double )") -DoubleVector.cNamespace().alloc_copy = cwrapper.prototype("double_vector_obj double_vector_alloc_copy( double_vector )") -DoubleVector.cNamespace().strided_copy = cwrapper.prototype("double_vector_obj double_vector_alloc_strided_copy( double_vector , int , int , int)") -DoubleVector.cNamespace().free = cwrapper.prototype("void double_vector_free( double_vector )") -DoubleVector.cNamespace().iget = cwrapper.prototype("double double_vector_iget( double_vector , int )") -DoubleVector.cNamespace().safe_iget = cwrapper.prototype("double double_vector_safe_iget( int_vector , int )") -DoubleVector.cNamespace().iset = cwrapper.prototype("double double_vector_iset( double_vector , int , double)") -DoubleVector.cNamespace().size = cwrapper.prototype("int double_vector_size( double_vector )") -DoubleVector.cNamespace().append = cwrapper.prototype("void double_vector_append( double_vector , double )") -DoubleVector.cNamespace().idel_block = cwrapper.prototype("void double_vector_idel_block( double_vector , int , int )") -DoubleVector.cNamespace().fprintf = cwrapper.prototype("void double_vector_fprintf( double_vector , FILE , char* , char*)") -DoubleVector.cNamespace().sort = cwrapper.prototype("void double_vector_sort( double_vector )") -DoubleVector.cNamespace().rsort = cwrapper.prototype("void double_vector_rsort( double_vector )") -DoubleVector.cNamespace().reset = cwrapper.prototype("void double_vector_reset( double_vector )") -DoubleVector.cNamespace().get_read_only = cwrapper.prototype("bool double_vector_get_read_only( double_vector )") -DoubleVector.cNamespace().set_read_only = cwrapper.prototype("void double_vector_set_read_only( double_vector , bool )") -DoubleVector.cNamespace().get_max = cwrapper.prototype("double double_vector_get_max( double_vector )") -DoubleVector.cNamespace().get_min = cwrapper.prototype("double double_vector_get_min( double_vector )") -DoubleVector.cNamespace().get_max_index = cwrapper.prototype("int double_vector_get_max_index( double_vector , bool)") -DoubleVector.cNamespace().get_min_index = cwrapper.prototype("int double_vector_get_min_index( double_vector , bool)") -DoubleVector.cNamespace().shift = cwrapper.prototype("void double_vector_shift( double_vector , double )") -DoubleVector.cNamespace().scale = cwrapper.prototype("void double_vector_scale( double_vector , double )") -DoubleVector.cNamespace().div = cwrapper.prototype("void double_vector_div( double_vector , double )") -DoubleVector.cNamespace().inplace_add = cwrapper.prototype("void double_vector_inplace_add( double_vector , double_vector )") -DoubleVector.cNamespace().inplace_mul = cwrapper.prototype("void double_vector_inplace_mul( double_vector , double_vector )") -DoubleVector.cNamespace().assign = cwrapper.prototype("void double_vector_set_all( double_vector , double)") -DoubleVector.cNamespace().memcpy = cwrapper.prototype("void double_vector_memcpy(double_vector , double_vector )") -DoubleVector.cNamespace().set_default = cwrapper.prototype("void double_vector_set_default( double_vector , double)") -DoubleVector.cNamespace().get_default = cwrapper.prototype("double double_vector_get_default( double_vector )") -DoubleVector.cNamespace().alloc_data_copy = cwrapper.prototype("double* double_vector_alloc_data_copy( double_vector )") -DoubleVector.cNamespace().data_ptr = cwrapper.prototype("double* double_vector_get_ptr( double_vector )") -DoubleVector.cNamespace().element_size = cwrapper.prototype("int double_vector_element_size( double_vector )") - - -IntVector.cNamespace().alloc = cwrapper.prototype("c_void_p int_vector_alloc( int , int )") -IntVector.cNamespace().alloc_copy = cwrapper.prototype("int_vector_obj int_vector_alloc_copy( int_vector )") -IntVector.cNamespace().strided_copy = cwrapper.prototype("int_vector_obj int_vector_alloc_strided_copy( int_vector , int , int , int)") -IntVector.cNamespace().free = cwrapper.prototype("void int_vector_free( int_vector )") -IntVector.cNamespace().iget = cwrapper.prototype("int int_vector_iget( int_vector , int )") -IntVector.cNamespace().safe_iget = cwrapper.prototype("int int_vector_safe_iget( int_vector , int )") -IntVector.cNamespace().iset = cwrapper.prototype("int int_vector_iset( int_vector , int , int)") -IntVector.cNamespace().size = cwrapper.prototype("int int_vector_size( int_vector )") -IntVector.cNamespace().append = cwrapper.prototype("void int_vector_append( int_vector , int )") -IntVector.cNamespace().idel_block = cwrapper.prototype("void int_vector_idel_block( int_vector , int , int )") -IntVector.cNamespace().fprintf = cwrapper.prototype("void int_vector_fprintf( int_vector , FILE , char* , char*)") -IntVector.cNamespace().sort = cwrapper.prototype("void int_vector_sort( int_vector )") -IntVector.cNamespace().rsort = cwrapper.prototype("void int_vector_rsort( int_vector )") -IntVector.cNamespace().reset = cwrapper.prototype("void int_vector_reset( int_vector )") -IntVector.cNamespace().set_read_only = cwrapper.prototype("void int_vector_set_read_only( int_vector , bool )") -IntVector.cNamespace().get_read_only = cwrapper.prototype("bool int_vector_get_read_only( int_vector )") -IntVector.cNamespace().get_max = cwrapper.prototype("int int_vector_get_max( int_vector )") -IntVector.cNamespace().get_min = cwrapper.prototype("int int_vector_get_min( int_vector )") -IntVector.cNamespace().get_max_index = cwrapper.prototype("int int_vector_get_max_index( int_vector , bool)") -IntVector.cNamespace().get_min_index = cwrapper.prototype("int int_vector_get_min_index( int_vector , bool)") -IntVector.cNamespace().shift = cwrapper.prototype("void int_vector_shift( int_vector , int )") -IntVector.cNamespace().scale = cwrapper.prototype("void int_vector_scale( int_vector , int )") -IntVector.cNamespace().div = cwrapper.prototype("void int_vector_div( int_vector , int )") -IntVector.cNamespace().inplace_add = cwrapper.prototype("void int_vector_inplace_add( int_vector , int_vector )") -IntVector.cNamespace().inplace_mul = cwrapper.prototype("void int_vector_inplace_mul( int_vector , int_vector )") -IntVector.cNamespace().assign = cwrapper.prototype("void int_vector_set_all( int_vector , int)") -IntVector.cNamespace().memcpy = cwrapper.prototype("void int_vector_memcpy(int_vector , int_vector )") -IntVector.cNamespace().set_default = cwrapper.prototype("void int_vector_set_default( int_vector , int)") -IntVector.cNamespace().get_default = cwrapper.prototype("int int_vector_get_default( int_vector )") -IntVector.cNamespace().alloc_data_copy = cwrapper.prototype("int* int_vector_alloc_data_copy( int_vector )") -IntVector.cNamespace().data_ptr = cwrapper.prototype("int* int_vector_get_ptr( int_vector )") -IntVector.cNamespace().element_size = cwrapper.prototype("int int_vector_element_size( int_vector )") - -IntVector.cNamespace().create_active_list = cwrapper.prototype("int_vector_obj string_util_alloc_active_list( char* )") - - -BoolVector.cNamespace().alloc = cwrapper.prototype("c_void_p bool_vector_alloc( int , bool )") -BoolVector.cNamespace().alloc_copy = cwrapper.prototype("bool_vector_obj bool_vector_alloc_copy( bool_vector )") -BoolVector.cNamespace().strided_copy = cwrapper.prototype("bool_vector_obj bool_vector_alloc_strided_copy( bool_vector , bool , bool , bool)") -BoolVector.cNamespace().free = cwrapper.prototype("void bool_vector_free( bool_vector )") -BoolVector.cNamespace().iget = cwrapper.prototype("bool bool_vector_iget( bool_vector , bool )") -BoolVector.cNamespace().safe_iget = cwrapper.prototype("bool bool_vector_safe_iget( bool_vector , bool )") -BoolVector.cNamespace().iset = cwrapper.prototype("bool bool_vector_iset( bool_vector , bool , bool)") -BoolVector.cNamespace().size = cwrapper.prototype("bool bool_vector_size( bool_vector )") -BoolVector.cNamespace().append = cwrapper.prototype("void bool_vector_append( bool_vector , bool )") -BoolVector.cNamespace().idel_block = cwrapper.prototype("void bool_vector_idel_block( bool_vector , bool , bool )") -BoolVector.cNamespace().fprintf = cwrapper.prototype("void bool_vector_fprintf( bool_vector , FILE , char* , char*)") -BoolVector.cNamespace().sort = cwrapper.prototype("void bool_vector_sort( bool_vector )") -BoolVector.cNamespace().rsort = cwrapper.prototype("void bool_vector_rsort( bool_vector )") -BoolVector.cNamespace().reset = cwrapper.prototype("void bool_vector_reset( bool_vector )") -BoolVector.cNamespace().set_read_only = cwrapper.prototype("void bool_vector_set_read_only( bool_vector , bool )") -BoolVector.cNamespace().get_read_only = cwrapper.prototype("bool bool_vector_get_read_only( bool_vector )") -BoolVector.cNamespace().get_max = cwrapper.prototype("bool bool_vector_get_max( bool_vector )") -BoolVector.cNamespace().get_min = cwrapper.prototype("bool bool_vector_get_min( bool_vector )") -BoolVector.cNamespace().get_max_index = cwrapper.prototype("bool bool_vector_get_max_index( bool_vector , bool)") -BoolVector.cNamespace().get_min_index = cwrapper.prototype("bool bool_vector_get_min_index( bool_vector , bool)") -BoolVector.cNamespace().shift = cwrapper.prototype("void bool_vector_shift( bool_vector , bool )") -BoolVector.cNamespace().scale = cwrapper.prototype("void bool_vector_scale( bool_vector , bool )") -BoolVector.cNamespace().div = cwrapper.prototype("void bool_vector_div( bool_vector , bool )") -BoolVector.cNamespace().inplace_add = cwrapper.prototype("void bool_vector_inplace_add( bool_vector , bool_vector )") -BoolVector.cNamespace().inplace_mul = cwrapper.prototype("void bool_vector_inplace_mul( bool_vector , bool_vector )") -BoolVector.cNamespace().assign = cwrapper.prototype("void bool_vector_set_all( bool_vector , bool)") -BoolVector.cNamespace().memcpy = cwrapper.prototype("void bool_vector_memcpy(bool_vector , bool_vector )") -BoolVector.cNamespace().set_default = cwrapper.prototype("void bool_vector_set_default( bool_vector , bool)") -BoolVector.cNamespace().get_default = cwrapper.prototype("bool bool_vector_get_default( bool_vector )") -BoolVector.cNamespace().alloc_data_copy = cwrapper.prototype("bool* bool_vector_alloc_data_copy( bool_vector )") -BoolVector.cNamespace().data_ptr = cwrapper.prototype("bool* bool_vector_get_ptr( bool_vector )") -BoolVector.cNamespace().element_size = cwrapper.prototype("int bool_vector_element_size( bool_vector )") - -BoolVector.cNamespace().create_active_mask = cwrapper.prototype("bool_vector_obj string_util_alloc_active_mask( char* )") -BoolVector.cNamespace().update_active_mask = cwrapper.prototype("bool string_util_update_active_mask(char*, bool_vector)") - - -TimeVector.cNamespace().alloc = cwrapper.prototype("c_void_p time_t_vector_alloc(int, time_t )") -TimeVector.cNamespace().alloc_copy = cwrapper.prototype("time_t_vector_obj time_t_vector_alloc_copy(time_t_vector )") -TimeVector.cNamespace().strided_copy = cwrapper.prototype("time_t_vector_obj time_t_vector_alloc_strided_copy(time_t_vector , time_t , time_t , time_t)") -TimeVector.cNamespace().free = cwrapper.prototype("void time_t_vector_free( time_t_vector )") -TimeVector.cNamespace().iget = cwrapper.prototype("time_t time_t_vector_iget( time_t_vector , int )") -TimeVector.cNamespace().safe_iget = cwrapper.prototype("time_t time_t_vector_safe_iget( time_t_vector , int )") -TimeVector.cNamespace().iset = cwrapper.prototype("time_t time_t_vector_iset( time_t_vector , int , time_t)") -TimeVector.cNamespace().size = cwrapper.prototype("int time_t_vector_size( time_t_vector )") -TimeVector.cNamespace().append = cwrapper.prototype("void time_t_vector_append( time_t_vector , time_t )") -TimeVector.cNamespace().idel_block = cwrapper.prototype("void time_t_vector_idel_block( time_t_vector , int , int )") -TimeVector.cNamespace().fprintf = cwrapper.prototype("void time_t_vector_fprintf( time_t_vector , FILE , char* , char*)") -TimeVector.cNamespace().sort = cwrapper.prototype("void time_t_vector_sort( time_t_vector )") -TimeVector.cNamespace().rsort = cwrapper.prototype("void time_t_vector_rsort( time_t_vector )") -TimeVector.cNamespace().reset = cwrapper.prototype("void time_t_vector_reset( time_t_vector )") -TimeVector.cNamespace().set_read_only = cwrapper.prototype("void time_t_vector_set_read_only( time_t_vector , bool )") -TimeVector.cNamespace().get_read_only = cwrapper.prototype("bool time_t_vector_get_read_only( time_t_vector )") -TimeVector.cNamespace().get_max = cwrapper.prototype("time_t time_t_vector_get_max( time_t_vector )") -TimeVector.cNamespace().get_min = cwrapper.prototype("time_t time_t_vector_get_min( time_t_vector )") -TimeVector.cNamespace().get_max_index = cwrapper.prototype("int time_t_vector_get_max_index( time_t_vector , bool)") -TimeVector.cNamespace().get_min_index = cwrapper.prototype("int time_t_vector_get_min_index( time_t_vector , bool)") -TimeVector.cNamespace().shift = cwrapper.prototype("void time_t_vector_shift( time_t_vector , time_t )") -TimeVector.cNamespace().scale = cwrapper.prototype("void time_t_vector_scale( time_t_vector , time_t )") -TimeVector.cNamespace().div = cwrapper.prototype("void time_t_vector_div( time_t_vector , time_t )") -TimeVector.cNamespace().inplace_add = cwrapper.prototype("void time_t_vector_inplace_add( time_t_vector , time_t_vector )") -TimeVector.cNamespace().inplace_mul = cwrapper.prototype("void time_t_vector_inplace_mul( time_t_vector , time_t_vector )") -TimeVector.cNamespace().assign = cwrapper.prototype("void time_t_vector_set_all( time_t_vector , time_t)") -TimeVector.cNamespace().memcpy = cwrapper.prototype("void time_t_vector_memcpy(time_t_vector , time_t_vector )") -TimeVector.cNamespace().set_default = cwrapper.prototype("void time_t_vector_set_default( time_t_vector , time_t)") -TimeVector.cNamespace().get_default = cwrapper.prototype("time_t time_t_vector_get_default( time_t_vector )") -TimeVector.cNamespace().alloc_data_copy = cwrapper.prototype("time_t* time_t_vector_alloc_data_copy( time_t_vector )") -TimeVector.cNamespace().data_ptr = cwrapper.prototype("time_t* time_t_vector_get_ptr( time_t_vector )") -TimeVector.cNamespace().element_size = cwrapper.prototype("int time_t_vector_element_size( time_t_vector )") - -#----------------------------------------------------------------- - - - - diff --git a/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py b/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py new file mode 100644 index 0000000000..c1536d02c7 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py @@ -0,0 +1,512 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'vector_template.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +""" +Typed vectors IntVector, DoubleVector and BoolVector. + +This module implements a quite simple typed vector which will grow +transparently as needed. The vector is created with a default value, +which will be used for not explicitly set indices. + + vec = IntVector( default_value = 66 ) + vec[0] = 10 + vec[2] = 10 + +After the 'vec[2] = 10' statement the vector has grown to contain +three elements. The element vec[1] has not been explicitly assigned by +the user, in that case the implementation has 'filled the hole' with +the default value (i.e. 66 in this case). So the statement + + print vec[1] + +will give '66'. The main part of the implementation is in terms of an +"abstract base class" TVector. The TVector class should be not +instantiated directly, instead the child classes IntVector, +DoubleVector or BoolVector should be used. + +The C-level has implementations for several fundamental types like +float and size_t not currently implemented in the Python version. +""" + +import sys +from types import IntType, SliceType + +from ert.cwrap import CWrapper, CFILE, BaseCClass +from ert.util import UTIL_LIB + + +class PermutationVector(BaseCClass): + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def free(self): + PermutationVector.cNamespace().free(self) + +CWrapper.registerObjectType("permutation_vector", PermutationVector) + +cwrapper = CWrapper(UTIL_LIB) +PermutationVector.cNamespace().free = cwrapper.prototype("void util_safe_free(permutation_vector)") + + + +# TVector takes advantage of the fact that self.cNamespace belongs to the inheriting class +class VectorTemplate(BaseCClass): + @classmethod + def strided_copy(cls, obj, slice_range): + """ + Will create a new copy according to @slice. + + Mainly a support function to support slice based lookup like + + v = IntVector() + v[0] = 1 + v[1] = 1 + v[100] = 100 + ... + c = v[0:100:10] + + Now 'c' will be a Intvector() instance containing every tenth + element from 'v'. + """ + (start, stop, step) = slice_range.indices(len(obj)) + if stop > start: + return cls.cNamespace().strided_copy(obj, start, stop, step) + else: + return None + + + @classmethod + def __copy__(cls, obj): + return cls.cNamespace().alloc_copy(obj) + + + def copy(self): + """ + Create a new copy of the current vector. + """ + new = self.__copy__(self) # Invoking the class method + return new + + def __irshift__(self,shift): + if shift < 0: + raise ValueError("The shift must be positive") + self.cNamespace().rshift(self, shift) + return self + + def __ilshift__(self,shift): + if shift < 0: + raise ValueError("The shift must be positive") + if shift > len(self): + raise ValueError("The shift is too large %d > %d" % (shift, len(self))) + self.cNamespace().lshift(self, shift) + return self + + + def __rshift__(self,shift): + copy = self.copy() + copy >>= shift + return copy + + + def __lshift__(self,shift): + copy = self.copy() + copy <<= shift + return copy + + def __deepcopy__(self, memo): + new = self.copy() + return new + + def __init__(self, default_value=0, initial_size=0): + """ + Creates a new TVector instance. + """ + c_pointer = self.cNamespace().alloc(initial_size, default_value) + super(VectorTemplate, self).__init__(c_pointer) + self.element_size = self.cNamespace().element_size(self) + + def __contains__(self , value): + return self.cNamespace().contains(self , value) + + + def pop(self): + if len(self) > 0: + return self.cNamespace().pop(self) + else: + raise ValueError("Trying to pop from empty vector") + + + def str_data(self, width, index1, index2, fmt): + """ + Helper function for str() method. + """ + data = [] + s = "" + for index in range(index1, index2): + data.append(self[index]) + for index in range(len(data)): + s += fmt % data[index] + if index % width == (width - 1): + s += "\n" + return s + + + # The str() method is a verbatim copy of the implementation in + # ecl_kw.py. + def str(self, width=5, max_lines=10, fmt=None): + """ + Return string representation of vector for pretty printing. + + The function will return a string consisting of a header, and + then a chunk of data. The data will be formatted in @width + columns, and a maximum of @max_lines lines. If @max_lines is + not sufficient the first elements in the kewyord are + represented, a .... continuation line and then the last part + of the vector. If @max_lines is None all of the vector will be + printed, irrespectiv of how long it is. + + If a value is given for @fmt that is used as format string for + each element, otherwise a type-specific default format is + used. If given the @fmt string should contain spacing between + the elements. The implementation of the builtin method + __str__() is based on this method. + """ + + s = "" + lines = len(self) / width + if not fmt: + fmt = self.default_format + " " + + if max_lines is None or lines <= max_lines: + s += self.str_data(width, 0, len(self), fmt) + else: + s1 = width * max_lines / 2 + s += self.str_data(width, 0, s1, fmt) + s += " .... \n" + s += self.str_data(width, len(self) - s1, len(self), fmt) + + return s + + def __str__(self): + """ + Returns string representantion of vector. + """ + return self.str(max_lines=10, width=5) + + + def __getitem__(self, index): + """ + Implements read [] operator - @index can be slice instance. + """ + if isinstance(index, IntType): + length = len(self) + if index < 0: + index += length + + if index < 0 or index >= length: + raise IndexError("Index must be in range %d <= %d < %d" % (0, index, length)) + else: + return self.cNamespace().iget(self, index) + elif isinstance(index, SliceType): + return self.strided_copy(self, index) + else: + raise TypeError("Index should be integer or slice type.") + + def __setitem__(self, index, value): + """ + Implements write [] operator - @index must be integer. + """ + if isinstance(index, IntType): + self.cNamespace().iset(self, index, value) + else: + raise TypeError("Index should be integer type") + + ################################################################## + # Mathematical operations: + + def __IADD(self, delta, add): + """ + Low-level function implementing inplace add. + + The __IADD__ function implements the operation: + + v += a + + The variable which is added, i.e. @delta, can either be of the + same type as the current instance, or a numerical scalar. The + __IADD__ method implements both add and subtract, based on the + boolean flag @add. + + The __IADD__ method should not be called directly; but rather + via the __iadd__, __add__ and __radd__ methods which implement + the various addition operation, and the corresponding + subtraction operations: __isub__, __sub__ and __rsub__. + """ + if type(self) == type(delta): + if len(self) == len(delta): + # This is vector + vector operation. + if not add: + self.cNamespace().scale(delta, -1) + self.cNamespace().inplace_add(self, delta) + else: + raise ValueError("Incompatible sizes for add self:%d other:%d" % (len(self), len(delta))) + else: + if isinstance(delta, int) or isinstance(delta, float): + if not add: + delta *= -1 + self.cNamespace().shift(self, delta) + else: + raise TypeError("delta has wrong type:%s " % type(delta)) + + return self + + + def __iadd__(self, delta): + """ + Implements inplace add. @delta can be vector or scalar. + """ + return self.__IADD(delta, True) + + + def __isub__(self, delta): + """ + Implements inplace subtract. @delta can be vector or scalar. + """ + return self.__IADD(delta, False) + + + def __radd__(self, delta): + return self.__add__(delta) + + + def __add__(self, delta): + """ + Implements add operation - creating a new copy. + + b = DoubleVector() + c = DoubleVector() // Or alternatively scalar + .... + a = b + c + """ + copy = self.__copy__(self) + copy += delta + return copy + + def __sub__(self, delta): + """ + Implements subtraction - creating new copy. + """ + copy = self.__copy__(self) + copy -= delta + return copy + + + def __rsub__(self, delta): + return self.__sub__(delta) * -1 + + + def __imul__(self, factor): + """ + Low-level function implementing inplace multiplication. + + The __IMUL__ function implements the operation: + + v *= a + + The variable which is multiplied in, i.e. @factor, can either + be of the same type as the current instance, or a numerical + scalar. The __IMUL__ method should not be called directly, but + rather via the __mul__, __imul__ and __rmul__ functions. + """ + + if type(self) == type(factor): + # This is vector * vector operation. + if len(self) == len(factor): + self.cNamespace().inplace_mul(self, factor) + else: + raise ValueError("Incompatible sizes for mul self:%d other:%d" % (len(self), len(factor))) + else: + if isinstance(factor, int) or isinstance(factor, float): + self.cNamespace().scale(self, factor) + else: + raise TypeError("factor has wrong type:%s " % type(factor)) + + return self + + + def __mul__(self, factor): + copy = self.__copy__(self) + copy *= factor + return copy + + def __rmul__(self, factor): + return self.__mul__(factor) + + + def __div__(self, divisor): + if isinstance(divisor, int) or isinstance(divisor, float): + copy = self.__copy__(self) + copy.cNamespace().div(copy, divisor) + return copy + else: + raise TypeError("Divisor has wrong type:%s" % type(divisor)) + + # End mathematical operations + ################################################################# + + # Essentally implements a = b + def assign(self, value): + """ + Implements assignment of type a = b. + + The @value parameter can either be a vector instance, in which + case the content of @value is copied into the current + instance, or a scalar in which case all the elements of the + vector are set to this value: + + v1 = IntVector() + v2 = IntVector() + + v1[10] = 77 + v2.assign( v1 ) # Now v2 contains identicall content to v1 + .... + v1.assign( 66 ) # Now v1 is a vector of 11 elements - all equal to 66 + + """ + if type(self) == type(value): + # This is a copy operation + self.cNamespace().memcpy(self, value) + else: + if isinstance(value, int) or isinstance(value, float): + self.cNamespace().assign(self, value) + else: + raise TypeError("Value has wrong type") + + def __len__(self): + """ + The number of elements in the vector. + """ + return self.cNamespace().size(self) + + + def printf(self, fmt=None, name=None, stream=sys.stdout): + """ + See also the str() method which returns string representantion + of the vector. + """ + cfile = CFILE(stream) + if not fmt: + fmt = self.default_format + self.cNamespace().fprintf(self, cfile, name, fmt) + + + def max(self): + if len(self) > 0: + return self.cNamespace().get_max(self) + else: + raise IndexError("The vector is empty!") + + def min(self): + if len(self) > 0: + return self.cNamespace().get_min(self) + else: + raise IndexError("The vector is empty!") + + + def minIndex(self, reverse=False): + """ + @type reverse: bool + @rtype: int + """ + if len(self) > 0: + return self.cNamespace().get_min_index(self, reverse) + else: + raise IndexError("The vector is empty!") + + def maxIndex(self, reverse=False): + """ + @type reverse: bool + @rtype: int + """ + if len(self) > 0: + return self.cNamespace().get_max_index(self, reverse) + else: + raise IndexError("The vector is empty!") + + def append(self, value): + self.cNamespace().append(self, value) + + def deleteBlock(self, index, block_size): + """ + Remove a block of size @block_size starting at @index. + + After the removal data will be left shifted. + """ + self.cNamespace().idel_block(self, index, block_size) + + def sort(self, reverse=False): + """ + Sort the vector inplace in increasing numerical order or decreasing order if reverse is True. + @type reverse: bool + """ + if not reverse: + self.cNamespace().sort(self) + else: + self.cNamespace().rsort(self) + + def clear(self): + self.cNamespace().reset(self) + + def safeGetByIndex(self, index): + return self.cNamespace().safe_iget(self, index) + + def setReadOnly(self, read_only): + self.cNamespace().set_read_only(self, read_only) + + def getReadOnly(self): + return self.cNamespace().get_read_only(self) + + def setDefault(self, value): + self.cNamespace().set_default(self, value) + + def getDefault(self): + return self.cNamespace().get_default(self) + + + def free(self): + self.cNamespace().free(self) + + def permute(self, permutation_vector): + """ + Reorders this vector based on the indexes in permutation_vector. + @type permutation_vector: PermutationVector + """ + assert isinstance(permutation_vector, PermutationVector) + + self.cNamespace().permute(self, permutation_vector) + + def permutationSort(self, reverse=False): + """ + Returns the permutation vector for sorting of this vector. Vector is not sorted. + @type reverse: bool + @@rtype: PermutationVector + """ + if len(self) > 0: + if not reverse: + return self.cNamespace().sort_perm(self) + else: + return self.cNamespace().rsort_perm(self) + + return None diff --git a/ThirdParty/Ert/devel/python/python/ert/util/version.py b/ThirdParty/Ert/devel/python/python/ert/util/version.py new file mode 100644 index 0000000000..c000a6779a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/util/version.py @@ -0,0 +1,34 @@ +from ert.cwrap import CNamespace, CWrapper +from ert.util import UTIL_LIB + + +class Version(object): + __namespace = CNamespace("Version") + + @classmethod + def getBuildTime(cls): + return Version.cNamespace().build_time() + + @classmethod + def getGitCommit(cls, short=False): + if not short: + return Version.cNamespace().git_commit() + else: + return Version.cNamespace().git_commit_short() + + + @classmethod + def getVersion(cls): + return Version.cNamespace().ert_version() + + @classmethod + def cNamespace(cls): + return Version.__namespace + + +cwrapper = CWrapper(UTIL_LIB) + +Version.cNamespace().build_time = cwrapper.prototype("char* version_get_build_time()") +Version.cNamespace().git_commit = cwrapper.prototype("char* version_get_git_commit()") +Version.cNamespace().git_commit_short = cwrapper.prototype("char* version_get_git_commit_short()") +Version.cNamespace().ert_version = cwrapper.prototype("char* version_get_ert_version()") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/well/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/well/CMakeLists.txt index afcae9bdbe..c9601f7487 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/well/CMakeLists.txt @@ -1,10 +1,12 @@ set(PYTHON_SOURCES __init__.py - libwell.py - well.py + well_connection.py + well_connection_direction_enum.py well_info.py + well_segment.py well_state.py - well_ts.py + well_time_line.py + well_type_enum.py ) add_python_package("python.ert.well" ${PYTHON_INSTALL_PREFIX}/ert/well "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/well/__init__.py b/ThirdParty/Ert/devel/python/python/ert/well/__init__.py index e69de29bb2..7f5f0b2144 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/__init__.py @@ -0,0 +1,12 @@ +import ert.cwrap.clib as clib + +ECL_WELL_LIB = clib.ert_load("libecl_well") + + +from .well_type_enum import WellTypeEnum +from .well_connection_direction_enum import WellConnectionDirectionEnum +from .well_connection import WellConnection +from .well_segment import WellSegment +from .well_state import WellState +from .well_time_line import WellTimeLine +from .well_info import WellInfo diff --git a/ThirdParty/Ert/devel/python/python/ert/well/libwell.py b/ThirdParty/Ert/devel/python/python/ert/well/libwell.py deleted file mode 100644 index d0f94e7195..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/well/libwell.py +++ /dev/null @@ -1,3 +0,0 @@ -import ert.ecl -import ert.cwrap.clib as clib -lib = clib.ert_load("libecl_well.so") diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well.py b/ThirdParty/Ert/devel/python/python/ert/well/well.py deleted file mode 100644 index 2b86787c4c..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/well/well.py +++ /dev/null @@ -1,4 +0,0 @@ -import libwell -from well_state import WellState -from well_info import WellInfo -from well_ts import WellTS diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_connection.py b/ThirdParty/Ert/devel/python/python/ert/well/well_connection.py new file mode 100644 index 0000000000..d41c595acb --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_connection.py @@ -0,0 +1,72 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.well import ECL_WELL_LIB + +class WellConnection(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly") + + + def isOpen(self): + """ @rtype: bool """ + return WellConnection.cNamespace().is_open(self) + + + def ijk(self): + """ @rtype: tuple of (int, int, int) """ + i = WellConnection.cNamespace().i(self) + j = WellConnection.cNamespace().j(self) + k = WellConnection.cNamespace().k(self) + return i, j, k + + def direction(self): + """ @rtype: WellConnectionDirectionEnum """ + return WellConnection.cNamespace().get_dir(self) + + def segmentId(self): + """ @rtype: int """ + return WellConnection.cNamespace().segment_id(self) + + def isFractureConnection(self): + """ @rtype: bool """ + return WellConnection.cNamespace().fracture_connection(self) + + def isMatrixConnection(self): + """ @rtype: bool """ + return WellConnection.cNamespace().matrix_connection(self) + + def connectionFactor(self): + """ @rtype: float """ + return WellConnection.cNamespace().connection_factor(self) + + def __eq__(self, other): + return WellConnection.cNamespace().equal(self, other) + + def __ne__(self, other): + return not self == other + + def free(self): + pass + + def isMultiSegmentWell(self): + """ @rtype: bool """ + return WellConnection.cNamespace().is_msw(self) + + +CWrapper.registerObjectType("well_connection", WellConnection) +cwrapper = CWrapper(ECL_WELL_LIB) + + +WellConnection.cNamespace().i = cwrapper.prototype("int well_conn_get_i(well_connection)") +WellConnection.cNamespace().j = cwrapper.prototype("int well_conn_get_j(well_connection)") +WellConnection.cNamespace().k = cwrapper.prototype("int well_conn_get_k(well_connection)") +WellConnection.cNamespace().get_dir = cwrapper.prototype("well_connection_dir_enum well_conn_get_dir(well_connection)") + +WellConnection.cNamespace().segment_id = cwrapper.prototype("int well_conn_get_segment_id(well_connection)") +WellConnection.cNamespace().is_open = cwrapper.prototype("bool well_conn_open(well_connection)") +WellConnection.cNamespace().is_msw = cwrapper.prototype("bool well_conn_MSW(well_connection)") +WellConnection.cNamespace().fracture_connection = cwrapper.prototype("bool well_conn_fracture_connection(well_connection)") +WellConnection.cNamespace().matrix_connection = cwrapper.prototype("bool well_conn_matrix_connection(well_connection)") +WellConnection.cNamespace().connection_factor = cwrapper.prototype("double well_conn_get_connection_factor(well_connection)") + +WellConnection.cNamespace().equal = cwrapper.prototype("bool well_conn_equal(well_connection, well_connection)") diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_connection_direction_enum.py b/ThirdParty/Ert/devel/python/python/ert/well/well_connection_direction_enum.py new file mode 100644 index 0000000000..b61a19a1fa --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_connection_direction_enum.py @@ -0,0 +1,17 @@ +from ert.cwrap import BaseCEnum +from ert.well import ECL_WELL_LIB + +class WellConnectionDirectionEnum(BaseCEnum): + well_conn_dirX = None + well_conn_dirY = None + well_conn_dirZ = None + well_conn_fracX = None + well_conn_fracY = None + +WellConnectionDirectionEnum.addEnum("well_conn_dirX", 1) +WellConnectionDirectionEnum.addEnum("well_conn_dirY", 2) +WellConnectionDirectionEnum.addEnum("well_conn_dirZ", 3) +WellConnectionDirectionEnum.addEnum("well_conn_fracX", 4) +WellConnectionDirectionEnum.addEnum("well_conn_fracY", 5) + +WellConnectionDirectionEnum.registerEnum(ECL_WELL_LIB, "well_connection_dir_enum") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py index 4578351202..b2639e3cff 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py @@ -1,24 +1,98 @@ -import libwell -from ert.cwrap.cwrap import * -import well_state +from ert.cwrap import BaseCClass, CWrapper +from ert.ecl import EclGrid +from ert.ecl.ecl_file import EclFile +from ert.well import ECL_WELL_LIB, WellTimeLine -class WellInfo: - - def __init__(self): - pass +class WellInfo(BaseCClass): - + def __init__(self, grid, rst_file=None): + """ + @type grid: EclGrid + @type rst_file: str or EclFile or list of str or list of EclFile + """ + c_ptr = WellInfo.cNamespace().alloc(grid) + super(WellInfo, self).__init__(c_ptr) + if rst_file is not None: + if isinstance(rst_file, list): + for item in rst_file: + self.addWellFile(item) + else: + self.addWellFile(rst_file) -# 2. Creating a wrapper object around the libecl library, -cwrapper = CWrapper( libwell.lib ) -cwrapper.registerType( "well_info" , WellInfo ) + def __len__(self): + """ @rtype: int """ + return WellInfo.cNamespace().get_well_count(self) -# 3. Installing the c-functions used to manipulate ecl_file instances. -# These functions are used when implementing the EclFile class, not -# used outside this scope. -cfunc = CWrapperNameSpace("well_info") + def __getitem__(self, item): + """ + @type item: int or str + @rtype: WellTimeLine + """ + + if isinstance(item, str): + if not item in self: + raise KeyError("The well '%s' is not in this set." % item) + well_name = item + + elif isinstance(item, int): + if not 0 <= item < len(self): + raise IndexError("Index must be in range 0 <= %d < %d" % (item, len(self))) + well_name = WellInfo.cNamespace().iget_well_name(self, item) + + return WellInfo.cNamespace().get_ts(self, well_name).setParent(self) + + def __iter__(self): + """ @rtype: iterator of WellTimeLine """ + index = 0 + + while index < len(self): + yield self[index] + index += 1 + + + def allWellNames(self): + """ @rtype: list of str """ + return [WellInfo.cNamespace().iget_well_name(self, index) for index in range(0, len(self))] + + + def __contains__(self, item): + """ + @type item: str + @rtype: bool + """ + return WellInfo.cNamespace().has_well(self, item) + + def addWellFile(self, rst_file): + """ @type rstfile: str or EclFile """ + if isinstance(rst_file, str): + WellInfo.cNamespace().load_rstfile(self, rst_file) + elif isinstance(rst_file, EclFile): + WellInfo.cNamespace().load_rst_eclfile(self, rst_file) + else: + raise TypeError("Expected the RST file to be a filename or an EclFile instance.") + + + def free(self): + WellInfo.cNamespace().free(self) + + +CWrapper.registerObjectType("well_info", WellInfo) + +cwrapper = CWrapper(ECL_WELL_LIB) + +WellInfo.cNamespace().alloc = cwrapper.prototype("c_void_p well_info_alloc(ecl_grid)") +WellInfo.cNamespace().free = cwrapper.prototype("void well_info_free(well_info)") + +WellInfo.cNamespace().load_rstfile = cwrapper.prototype("void well_info_load_rstfile(well_info, char*)") +WellInfo.cNamespace().load_rst_eclfile = cwrapper.prototype("void well_info_load_rst_eclfile(well_info, ecl_file)") + +WellInfo.cNamespace().get_well_count = cwrapper.prototype("int well_info_get_num_wells(well_info)") +WellInfo.cNamespace().iget_well_name = cwrapper.prototype("char* well_info_iget_well_name(well_info, int)") +WellInfo.cNamespace().get_ts = cwrapper.prototype("well_time_line_ref well_info_get_ts(well_info, char*)") + +WellInfo.cNamespace().has_well = cwrapper.prototype("bool well_info_has_well(well_info, char*)") diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py b/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py new file mode 100644 index 0000000000..21a38758b4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py @@ -0,0 +1,73 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.well import ECL_WELL_LIB + +class WellSegment(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly") + + def free(self): + pass + + def id(self): + """ @rtype: int """ + return WellSegment.cNamespace().id(self) + + def linkCount(self): + """ @rtype: int """ + return WellSegment.cNamespace().link_count(self) + + def branchId(self): + """ @rtype: int """ + return WellSegment.cNamespace().branch_id(self) + + def outletId(self): + """ @rtype: int """ + return WellSegment.cNamespace().outlet_id(self) + + def isActive(self): + """ @rtype: bool """ + return WellSegment.cNamespace().active(self) + + def isMainStem(self): + """ @rtype: bool """ + return WellSegment.cNamespace().main_stem(self) + + def isNearestWellHead(self): + """ @rtype: bool """ + return WellSegment.cNamespace().nearest_wellhead(self) + + def depth(self): + """ @rtype: float """ + return WellSegment.cNamespace().depth(self) + + def length(self): + """ @rtype: float """ + return WellSegment.cNamespace().length(self) + + def totalLength(self): + """ @rtype: float """ + return WellSegment.cNamespace().total_length(self) + + def diameter(self): + """ @rtype: float """ + return WellSegment.cNamespace().diameter(self) + + +CWrapper.registerObjectType("well_segment", WellSegment) +cwrapper = CWrapper(ECL_WELL_LIB) + + +WellSegment.cNamespace().active = cwrapper.prototype("bool well_segment_active(well_segment)") +WellSegment.cNamespace().main_stem = cwrapper.prototype("bool well_segment_main_stem(well_segment)") +WellSegment.cNamespace().nearest_wellhead = cwrapper.prototype("bool well_segment_nearest_wellhead(well_segment)") + +WellSegment.cNamespace().id = cwrapper.prototype("int well_segment_get_id(well_segment)") +WellSegment.cNamespace().link_count = cwrapper.prototype("int well_segment_get_link_count(well_segment)") +WellSegment.cNamespace().branch_id = cwrapper.prototype("int well_segment_get_branch_id(well_segment)") +WellSegment.cNamespace().outlet_id = cwrapper.prototype("int well_segment_get_outlet_id(well_segment)") + +WellSegment.cNamespace().depth = cwrapper.prototype("double well_segment_get_depth(well_segment)") +WellSegment.cNamespace().length = cwrapper.prototype("double well_segment_get_length(well_segment)") +WellSegment.cNamespace().total_length = cwrapper.prototype("double well_segment_get_total_length(well_segment)") +WellSegment.cNamespace().diameter = cwrapper.prototype("double well_segment_get_diameter(well_segment)") diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py index 2b00cfc825..6c6c635314 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py @@ -1,20 +1,100 @@ -import libwell -from ert.cwrap.cwrap import * +from ert.cwrap import BaseCClass, CWrapper +from ert.well import ECL_WELL_LIB, WellTypeEnum, WellConnection +from ert.util import CTime + + +class WellState(BaseCClass): -class WellState: def __init__(self): - self.c_ptr = None + raise NotImplementedError("Class can not be instantiated directly") + + + def name(self): + """ @rtype: str """ + return WellState.cNamespace().get_name(self) + + def isOpen(self): + """ @rtype: bool """ + return WellState.cNamespace().is_open(self) + + def free(self): + pass + + def wellNumber(self): + """ @rtype: int """ + return WellState.cNamespace().well_number(self) + + def reportNumber(self): + """ @rtype: int """ + return WellState.cNamespace().report_number(self) + + def simulationTime(self): + """ @rtype: CTime """ + return WellState.cNamespace().sim_time(self) + + def wellType(self): + """ @rtype: WellTypeEnum """ + return WellState.cNamespace().well_type(self) + + def hasGlobalConnections(self): + """ @rtype: bool """ + return WellState.cNamespace().has_global_connections(self) + + def globalConnections(self): + """ @rtype: list of WellConnection """ + global_connections = WellState.cNamespace().get_global_connections(self) + count = WellState.cNamespace().global_connections_size(global_connections) + + values = [] + for index in range(count): + value = WellState.cNamespace().global_connections_iget(global_connections, index).setParent(self) + values.append(value) + return values + + + def segments(self): + """ @rtype: list of WellSegment """ + segment_collection = WellState.cNamespace().get_segment_collection(self) + count = WellState.cNamespace().segment_collection_size(segment_collection) + + values = [] + for index in range(count): + value = WellState.cNamespace().segment_collection_iget(segment_collection, index).setParent(self) + values.append(value) + + return values + + # def branches(self): + # """ @rtype: BranchCollection """ + + def isMultiSegmentWell(self): + """ @rtype: bool """ + return WellState.cNamespace().is_msw(self) + + +CWrapper.registerObjectType("well_state", WellState) +cwrapper = CWrapper(ECL_WELL_LIB) + + +WellState.cNamespace().get_name = cwrapper.prototype("char* well_state_get_name(well_state)") +WellState.cNamespace().is_open = cwrapper.prototype("bool well_state_is_open(well_state)") +WellState.cNamespace().is_msw = cwrapper.prototype("bool well_state_is_MSW(well_state)") +WellState.cNamespace().well_number = cwrapper.prototype("int well_state_get_well_nr(well_state)") +WellState.cNamespace().report_number = cwrapper.prototype("int well_state_get_report_nr(well_state)") +WellState.cNamespace().sim_time = cwrapper.prototype("time_t well_state_get_sim_time(well_state)") +WellState.cNamespace().well_type = cwrapper.prototype("well_type_enum well_state_get_type(well_state)") +WellState.cNamespace().has_global_connections = cwrapper.prototype("bool well_state_has_global_connections(well_state)") +WellState.cNamespace().get_global_connections = cwrapper.prototype("c_void_p well_state_get_global_connections(well_state)") +WellState.cNamespace().global_connections_size = cwrapper.prototype("int well_conn_collection_get_size(c_void_p)") +WellState.cNamespace().global_connections_iget = cwrapper.prototype("well_connection_ref well_conn_collection_iget(c_void_p, int)") +WellState.cNamespace().get_segment_collection = cwrapper.prototype("c_void_p well_state_get_segments(well_state)") +WellState.cNamespace().segment_collection_size = cwrapper.prototype("int well_segment_collection_get_size(c_void_p)") +WellState.cNamespace().segment_collection_iget = cwrapper.prototype("well_segment_ref well_segment_collection_iget(c_void_p, int)") -# 2. Creating a wrapper object around the libwell library, -cwrapper = CWrapper( libwell.lib ) -cwrapper.registerType( "well_state" , WellState ) +WellState.cNamespace().branches = cwrapper.prototype("c_void_p well_state_get_branches(well_state)") +WellState.cNamespace().segments = cwrapper.prototype("c_void_p well_state_get_segments(well_state)") -# 3. Installing the c-functions used to manipulate ecl_file instances. -# These functions are used when implementing the WellState class, not -# used outside this scope. -cfunc = CWrapperNameSpace("well_state") - diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py b/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py new file mode 100644 index 0000000000..22ec7f1cf3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py @@ -0,0 +1,35 @@ +from ert.cwrap import BaseCClass, CWrapper +from ert.well import ECL_WELL_LIB, WellState + +class WellTimeLine(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly") + + + def __len__(self): + """ @rtype: int """ + return WellTimeLine.cNamespace().size(self) + + + def __getitem__(self, index): + """ + @type index: int + @rtype: WellState + """ + + if not 0 <= index < len(self): + raise IndexError("Index must be in range 0 <= %d < %d" % (index, len(self))) + + return WellTimeLine.cNamespace().iget(self, index).setParent(self) + + + def free(self): + pass + +CWrapper.registerObjectType("well_time_line", WellTimeLine) +cwrapper = CWrapper(ECL_WELL_LIB) + + +WellTimeLine.cNamespace().size = cwrapper.prototype("int well_ts_get_size(well_time_line)") +WellTimeLine.cNamespace().iget = cwrapper.prototype("well_state_ref well_ts_iget_state(well_time_line, int)") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_ts.py b/ThirdParty/Ert/devel/python/python/ert/well/well_ts.py deleted file mode 100644 index 4bef71dd6c..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_ts.py +++ /dev/null @@ -1,24 +0,0 @@ -import libwell -from ert.cwrap.cwrap import * -import well_ts - - -class WellTS: - - def __init__(self): - pass - - - - -# 2. Creating a wrapper object around the libecl library, -cwrapper = CWrapper( libwell.lib ) -cwrapper.registerType( "well_ts" , WellTS ) - - -# 3. Installing the c-functions used to manipulate ecl_file instances. -# These functions are used when implementing the EclFile class, not -# used outside this scope. -cfunc = CWrapperNameSpace("well_ts") - - diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_type_enum.py b/ThirdParty/Ert/devel/python/python/ert/well/well_type_enum.py new file mode 100644 index 0000000000..05767027ae --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_type_enum.py @@ -0,0 +1,17 @@ +from ert.cwrap import BaseCEnum +from ert.well import ECL_WELL_LIB + +class WellTypeEnum(BaseCEnum): + UNDOCUMENTED_ZERO = None + PRODUCER = None + WATER_INJECTOR = None + GAS_INJECTOR = None + OIL_INJECTOR = None + +WellTypeEnum.addEnum("UNDOCUMENTED_ZERO", 0) +WellTypeEnum.addEnum("PRODUCER", 10) +WellTypeEnum.addEnum("WATER_INJECTOR", 22) +WellTypeEnum.addEnum("GAS_INJECTOR", 21) +WellTypeEnum.addEnum("OIL_INJECTOR", 78) + +WellTypeEnum.registerEnum(ECL_WELL_LIB, "well_type_enum") \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/CMakeLists.txt index ed9e4f0052..bb20ba911a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/CMakeLists.txt @@ -1,9 +1,11 @@ set(PYTHON_SOURCES __init__.py + ert_splash.py gert_main.py ide_test.py main_window.py newconfig.py + about_dialog.py ) add_python_package("python.ert_gui" ${PYTHON_INSTALL_PREFIX}/ert_gui "${PYTHON_SOURCES}" True) @@ -13,4 +15,16 @@ add_subdirectory(models) add_subdirectory(pages) add_subdirectory(simulation) add_subdirectory(tools) +add_subdirectory(viewer) add_subdirectory(widgets) + +#----------------------------------------------------------------- + +set(site_config_target "${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX}/ert_gui/site_config.py") +set(destination "${CMAKE_INSTALL_PREFIX}/${PYTHON_INSTALL_PREFIX}/ert_gui") +set(install_target "${destination}/site_config.py") + +configure_file(site_config.py.in ${site_config_target}) +install(FILES ${site_config_target} DESTINATION ${destination} ) +install(CODE "execute_process(COMMAND ${PROJECT_SOURCE_DIR}/cmake/cmake_pyc_file ${install_target})") + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/about_dialog.py b/ThirdParty/Ert/devel/python/python/ert_gui/about_dialog.py new file mode 100644 index 0000000000..f6d5fcf515 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/about_dialog.py @@ -0,0 +1,123 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'closable_dialog.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from PyQt4.QtCore import Qt, QSize +from PyQt4.QtGui import QDialog, QVBoxLayout, QPushButton, QHBoxLayout, QLabel, QGraphicsView, QGraphicsScene, QGraphicsPixmapItem, QFont +from ert.util import Version +from ert_gui.widgets import util + + +class AboutDialog(QDialog): + + def __init__(self, parent): + QDialog.__init__(self, parent) + + self.setWindowTitle("About") + self.setModal(True) + self.setFixedSize(QSize(600, 480)) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowContextHelpButtonHint) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowCloseButtonHint) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowCancelButtonHint) + + main_layout = QVBoxLayout() + + main_layout.addLayout(self.createTopLayout()) + main_layout.addLayout(self.createGplLayout()) + main_layout.addLayout(self.createButtonLayout()) + + self.setLayout(main_layout) + + + def createTopLayout(self): + top_layout = QHBoxLayout() + + image_label = QLabel() + image = util.resourceImage("splash.jpg") + image_label.setPixmap(image.scaled(200, 240, Qt.KeepAspectRatio)) + + top_layout.addWidget(image_label) + + top_layout.addLayout(self.createInfoLayout(), 1) + + return top_layout + + @staticmethod + def createInfoLayout(): + info_layout = QVBoxLayout() + + ert = QLabel() + ert.setAlignment(Qt.AlignHCenter) + + title_font = QFont() + title_font.setPointSize(40) + ert.setFont(title_font) + ert.setText("ERT") + + info_layout.addWidget(ert) + info_layout.addStretch(1) + ert_title = QLabel() + ert_title.setAlignment(Qt.AlignHCenter) + ert_title.setText("Ensemble based Reservoir Tool") + info_layout.addWidget(ert_title) + + version = QLabel() + version.setAlignment(Qt.AlignHCenter) + version.setText("Version: %s" % Version.getVersion()) + info_layout.addWidget(version) + + timestamp = QLabel() + timestamp.setAlignment(Qt.AlignHCenter) + timestamp.setText("Build time: %s" % Version.getBuildTime()) + info_layout.addWidget(timestamp) + + git_commit = QLabel() + git_commit.setAlignment(Qt.AlignHCenter) + git_commit.setText("Git commit hash: %s" % Version.getGitCommit(short=True)) + info_layout.addWidget(git_commit) + + info_layout.addStretch(5) + + return info_layout + + + def createGplLayout(self): + gpl = QLabel() + gpl.setText("ERT is free software: you can redistribute it and/or modify \ + it under the terms of the GNU General Public License as published by \ + the Free Software Foundation, either version 3 of the License, or \ + (at your option) any later version.

\ + \ + ERT is distributed in the hope that it will be useful, but WITHOUT ANY \ + WARRANTY; without even the implied warranty of MERCHANTABILITY or \ + FITNESS FOR A PARTICULAR PURPOSE.

\ + \ + See the GNU General Public License at www.gnu.org for more details. ") + gpl.setWordWrap(True) + gpl_layout = QVBoxLayout() + gpl_layout.addWidget(gpl) + return gpl_layout + + def createButtonLayout(self): + button_layout = QHBoxLayout() + + close_button = QPushButton("Close") + close_button.clicked.connect(self.accept) + + button_layout.addStretch() + button_layout.addWidget(close_button) + button_layout.addStretch() + + return button_layout diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ert_splash.py b/ThirdParty/Ert/devel/python/python/ert_gui/ert_splash.py new file mode 100644 index 0000000000..e882960f34 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ert_splash.py @@ -0,0 +1,105 @@ +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QSplashScreen, QApplication, QColor, QPen, QFont +from ert_gui.widgets import util + + +class ErtSplash(QSplashScreen): + def __init__(self): + QSplashScreen.__init__(self) + self.setWindowFlags(Qt.WindowStaysOnTopHint | Qt.SplashScreen) + + splash_width = 720 + splash_height = 400 + + desktop = QApplication.desktop() + screen = desktop.screenGeometry(desktop.primaryScreen()).size() + + screen_width, screen_height = screen.width(), screen.height() + x = screen_width / 2 - splash_width / 2 + y = screen_height / 2 - splash_height / 2 + self.setGeometry(x, y, splash_width, splash_height) + + + self.splash_image = util.resourceImage("splash.jpg") + + self.ert = "ERT" + self.ert_title = "Ensemble based Reservoir Tool" + self.version = "Version string" + self.timestamp = "Timestamp string" + self.copyright = u"Copyright \u00A9 2014 Statoil ASA, Norway" + + + def drawContents(self, painter): + """ @type painter: QPainter """ + w = self.width() + h = self.height() + + margin = 10 + + background = QColor(210, 211, 215) + text_color = QColor(0, 0, 0) + foreground = QColor(255, 255, 255) + + painter.setBrush(background) + painter.fillRect(0, 0, w, h, background) + + + pen = QPen() + pen.setWidth(2) + pen.setColor(foreground) + + + painter.setPen(pen) + painter.drawRect(0, 0, w - 1, h - 1) + + image_width = self.splash_image.width() + image_height = self.splash_image.height() + aspect = float(image_width) / float(image_height) + + scaled_height = h - 2 * margin + scaled_width = scaled_height * aspect + + painter.drawRect(margin, margin, scaled_width, scaled_height) + painter.drawPixmap(margin, margin, scaled_width, scaled_height, self.splash_image) + + text_x = scaled_width + 2 * margin + top_offset = margin + text_area_width = w - scaled_width - 2 * margin + + painter.setPen(text_color) + + + text_size = 150 + font = QFont("Serif") + font.setStyleHint(QFont.Serif) + font.setPixelSize(text_size) + painter.setFont(font) + painter.drawText(text_x, margin + top_offset, text_area_width, text_size, Qt.AlignHCenter | Qt.AlignCenter, self.ert) + + top_offset += text_size + 2 * margin + text_size = 25 + font.setPixelSize(text_size) + painter.setFont(font) + painter.drawText(text_x, top_offset, text_area_width, text_size, Qt.AlignHCenter | Qt.AlignCenter, self.ert_title) + + top_offset += text_size + 4 * margin + text_size = 20 + font.setPixelSize(text_size) + painter.setFont(font) + painter.drawText(text_x, top_offset, text_area_width, text_size, Qt.AlignHCenter | Qt.AlignCenter, self.version) + + top_offset += text_size + margin + text_size = 15 + font.setPixelSize(text_size) + painter.setFont(font) + painter.drawText(text_x, top_offset, text_area_width, text_size, Qt.AlignHCenter | Qt.AlignCenter, self.timestamp) + + + text_size = 12 + font.setPixelSize(text_size) + painter.setFont(font) + painter.drawText(text_x, h - text_size - margin - 5, text_area_width, text_size + 5, Qt.AlignHCenter | Qt.AlignCenter, self.copyright) + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/gert_main.py b/ThirdParty/Ert/devel/python/python/ert_gui/gert_main.py index 19636661b5..81376fa4fb 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/gert_main.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/gert_main.py @@ -113,22 +113,38 @@ import sys import os from PyQt4.QtCore import Qt -from PyQt4.QtGui import QApplication, QSplashScreen +from PyQt4.QtGui import QApplication, QSplashScreen, QFileDialog +import time from ert.enkf import EnKFMain +from ert.util import Version from ert_gui.main_window import GertMainWindow +from ert_gui.ert_splash import ErtSplash from ert_gui.models import ErtConnector +from ert_gui.pages.summary_panel import SummaryPanel from ert_gui.simulation.simulation_panel import SimulationPanel +from ert_gui.tools import HelpCenter +from ert_gui.tools.help import HelpTool from ert_gui.tools.ide import IdeTool +from ert_gui.tools.load_results import LoadResultsTool from ert_gui.tools.manage_cases import ManageCasesTool from ert_gui.tools.plot import PlotTool from ert_gui.tools.export import ExportTool from ert_gui.tools.workflows import WorkflowsTool -from ert_gui.widgets.help_dock import HelpDock +from ert_gui.widgets import util import ert_gui.widgets.util -ert_gui.widgets.util.img_prefix = os.getenv("ERT_SHARE_PATH") + "/gui/img/" +if os.getenv("ERT_SHARE_PATH"): + ert_share_path = os.getenv("ERT_SHARE_PATH") +else: + # If the ERT_SHARE_PATH variable is not set we try to use the + # source location relative to the location of the current file; + # assuming we are in the source directory. Will not work if we are + # in an arbitrary build directory. + ert_share_path = os.path.realpath( os.path.join( os.path.dirname( os.path.abspath( __file__)) , "../../../share")) + +ert_gui.widgets.util.img_prefix = ert_share_path + "/gui/img/" from ert_gui.newconfig import NewConfigurationDialog @@ -142,94 +158,125 @@ def __init__(self, enkf_main): assert isinstance(enkf_main, EnKFMain) self.__ert = enkf_main - def reloadGERT(self): - python = sys.executable + def reloadERT(self, config_file): + python_executable = sys.executable + ert_gui_main = sys.argv[0] + self.__ert.free() - os.execl(python, python, *sys.argv) + os.execl(python_executable, python_executable, ert_gui_main, config_file) def ert(self): return self.__ert -def main(): - app = QApplication(sys.argv) #Early so that QT is initialized before other imports +def main(argv): - splash = QSplashScreen(resourceImage("newsplash"), Qt.WindowStaysOnTopHint) - splash.show() - splash.showMessage("Starting up...", Qt.AlignLeft, Qt.white) - app.processEvents() + try: + import site_config + site_config_file = site_config.config_file + except ImportError: + site_config_file = None - HelpDock.setHelpLinkPrefix(os.getenv("ERT_SHARE_PATH") + "/gui/help/") + if os.getenv("ERT_SITE_CONFIG"): + site_config_file = os.getenv("ERT_SITE_CONFIG") - splash.showMessage("Bootstrapping...", Qt.AlignLeft, Qt.white) - app.processEvents() + app = QApplication(argv) #Early so that QT is initialized before other imports + app.setWindowIcon(util.resourceIcon("application/window_icon_cutout")) - strict = True - site_config = os.getenv("ERT_SITE_CONFIG") - if len(sys.argv) == 1: - print("-----------------------------------------------------------------") - print("-- You must supply the name of configuration file as the first --") - print("-- commandline argument: --") - print("-- --") - print("-- bash% gert --") - print("-- --") - print("-- If the configuration file does not exist, gert will create --") - print("-- create a new configuration file. --") - print("-----------------------------------------------------------------") + if len(argv) == 1: + config_file = QFileDialog.getOpenFileName(None, "Open Configuration File") + + config_file = str(config_file) + + if len(config_file) == 0: + print("-----------------------------------------------------------------") + print("-- You must supply the name of configuration file as the first --") + print("-- commandline argument: --") + print("-- --") + print("-- bash% gert --") + print("-- --") + print("-- If the configuration file does not exist, gert will create --") + print("-- create a new configuration file. --") + print("-----------------------------------------------------------------") + + sys.exit(1) else: - enkf_config = sys.argv[1] - if not os.path.exists(enkf_config): - print("Trying to start new config") - new_configuration_dialog = NewConfigurationDialog(enkf_config) - success = new_configuration_dialog.exec_() - if not success: - print("Can not run without a configuration file.") - sys.exit(1) - else: - enkf_config = new_configuration_dialog.getConfigurationPath() - firste_case_name = new_configuration_dialog.getCaseName() - dbase_type = new_configuration_dialog.getDBaseType() - num_realizations = new_configuration_dialog.getNumberOfRealizations() - storage_path = new_configuration_dialog.getStoragePath() + config_file = argv[1] - EnKFMain.createNewConfig(enkf_config, storage_path, firste_case_name, dbase_type, num_realizations) - strict = False + help_center = HelpCenter("ERT") + help_center.setHelpLinkPrefix(os.getenv("ERT_SHARE_PATH") + "/gui/help/") + help_center.setHelpMessageLink("welcome_to_ert") - ert = Ert(EnKFMain(enkf_config, site_config=site_config, strict=strict)) - ErtConnector.setErt(ert.ert()) + strict = True + + if not os.path.exists(config_file): + print("Trying to start new config") + new_configuration_dialog = NewConfigurationDialog(config_file) + success = new_configuration_dialog.exec_() + if not success: + print("Can not run without a configuration file.") + sys.exit(1) + else: + config_file = new_configuration_dialog.getConfigurationPath() + first_case_name = new_configuration_dialog.getCaseName() + dbase_type = new_configuration_dialog.getDBaseType() + num_realizations = new_configuration_dialog.getNumberOfRealizations() + storage_path = new_configuration_dialog.getStoragePath() + + EnKFMain.createNewConfig(config_file, storage_path, first_case_name, dbase_type, num_realizations) + strict = False + if os.path.isdir(config_file): + print("The specified configuration file is a directory!") + sys.exit(1) - splash.showMessage("Creating GUI...", Qt.AlignLeft, Qt.white) - app.processEvents() + splash = ErtSplash() + splash.version = "Version %s" % Version.getVersion() + splash.timestamp = Version.getBuildTime() + + splash.show() + splash.repaint() + + now = time.time() - window = GertMainWindow() - window.setWidget(SimulationPanel()) - window.addTool(IdeTool(os.path.basename(enkf_config), ert.reloadGERT)) - window.addTool(PlotTool()) - window.addTool(ExportTool()) - window.addTool(WorkflowsTool()) - window.addTool(ManageCasesTool()) + ert = Ert(EnKFMain(config_file, site_config = site_config_file, strict=strict)) + ErtConnector.setErt(ert.ert()) + window = GertMainWindow() + window.setWidget(SimulationPanel()) + help_tool = HelpTool("ERT", window) - splash.showMessage("Communicating with ERT...", Qt.AlignLeft, Qt.white) - app.processEvents() + window.addDock("Configuration Summary", SummaryPanel(), area=Qt.BottomDockWidgetArea) + window.addTool(IdeTool(os.path.basename(config_file), ert.reloadERT, help_tool)) + window.addTool(PlotTool()) + window.addTool(ExportTool()) + window.addTool(WorkflowsTool(ert.reloadERT)) + window.addTool(ManageCasesTool()) + window.addTool(LoadResultsTool()) + window.addTool(help_tool) + sleep_time = 2 - (time.time() - now) - window.show() - splash.finish(window) + if sleep_time > 0: + time.sleep(sleep_time) + window.show() + splash.finish(window) + window.activateWindow() + window.raise_() + finished_code = app.exec_() - HelpDock.setHelpMessageLink("welcome_to_ert") + ert.ert().free() - sys.exit(app.exec_()) + sys.exit(finished_code) if __name__ == "__main__": - main() + main(sys.argv) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/advanced_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/advanced_keywords.py index 459d3caa76..676ede7415 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/advanced_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/advanced_keywords.py @@ -18,7 +18,7 @@ def addFixedLengthScheduleKw(self): fixed_length_sched_kw = ConfigurationLineDefinition(keyword=KeywordDefinition("ADD_FIXED_LENGTH_SCHEDULE_KW"), arguments=[StringArgument(), StringArgument()], - documentation_link="advanced/add_fixed_length_schedule_kw", + documentation_link="keywords/add_fixed_length_schedule_kw", required=False, group=self.group) return fixed_length_sched_kw @@ -28,7 +28,7 @@ def addStaticKw(self): add_static_kw = ConfigurationLineDefinition(keyword=KeywordDefinition("ADD_STATIC_KW"), arguments=[StringArgument(), StringArgument()], - documentation_link="advanced/add_static_kw", + documentation_link="keywords/add_static_kw", required=False, group=self.group) return add_static_kw @@ -39,7 +39,7 @@ def addDefine(self): define = ConfigurationLineDefinition(keyword=KeywordDefinition("DEFINE"), arguments=[ProperNameArgument(), StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="advanced/define", + documentation_link="keywords/define", required=False, group=self.group) return define @@ -49,7 +49,7 @@ def addDefine(self): def addSchedulePredictionFile(self): schedule_prediction_file = ConfigurationLineDefinition(keyword=KeywordDefinition("SCHEDULE_PREDICTION_FILE"), arguments=[PathArgument()], - documentation_link="advanced/schedule_prediction_file", + documentation_link="keywords/schedule_prediction_file", required=False, group=self.group) return schedule_prediction_file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/analysis_module_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/analysis_module_keywords.py index 4bfd07a8ba..604e59801a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/analysis_module_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/analysis_module_keywords.py @@ -11,18 +11,18 @@ def __init__(self, ert_keywords): ert_keywords.addKeyword(self.addAnalysisSelect()) ert_keywords.addKeyword(self.addAnalysisCopy()) ert_keywords.addKeyword(self.addAnalysisSetVar()) - ert_keywords.addKeyword(self.addIterRunpath()) ert_keywords.addKeyword(self.addIterCase()) ert_keywords.addKeyword(self.addIterCount()) ert_keywords.addKeyword(self.addStdCutoff()) ert_keywords.addKeyword(self.addSingleNodeUpdate()) + ert_keywords.addKeyword(self.addIterRetryCount()) def addAnalysisLoad(self): analysis_load = ConfigurationLineDefinition(keyword=KeywordDefinition("ANALYSIS_LOAD"), arguments=[StringArgument(),StringArgument()], - documentation_link="analysis_module/analysis_load", + documentation_link="keywords/analysis_load", required=False, group=self.group) return analysis_load @@ -32,7 +32,7 @@ def addAnalysisLoad(self): def addAnalysisSelect(self): analysis_select = ConfigurationLineDefinition(keyword=KeywordDefinition("ANALYSIS_SELECT"), arguments=[StringArgument()], - documentation_link="analysis_module/analysis_select", + documentation_link="keywords/analysis_select", required=False, group=self.group) return analysis_select @@ -43,7 +43,7 @@ def addAnalysisSetVar(self): arguments=[StringArgument(), StringArgument(), StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="analysis_module/analysis_set_var", + documentation_link="keywords/analysis_set_var", required=False, group=self.group) return analysis_set_var @@ -53,26 +53,18 @@ def addAnalysisSetVar(self): def addAnalysisCopy(self): analysis_copy = ConfigurationLineDefinition(keyword=KeywordDefinition("ANALYSIS_COPY"), arguments=[StringArgument(), StringArgument()], - documentation_link="analysis_module/analysis_copy", + documentation_link="keywords/analysis_copy", required=False, group=self.group) return analysis_copy - def addIterRunpath(self): - iter_runpath = ConfigurationLineDefinition(keyword=KeywordDefinition("ITER_RUNPATH"), - arguments=[PathArgument()], - documentation_link="analysis_module/iter_runpath", - required=False, - group=self.group) - return iter_runpath - def addIterCase(self): iter_case = ConfigurationLineDefinition(keyword=KeywordDefinition("ITER_CASE"), arguments=[ProperNameFormatArgument()], - documentation_link="analysis_module/iter_case", + documentation_link="keywords/iter_case", required=False, group=self.group) return iter_case @@ -81,16 +73,25 @@ def addIterCase(self): def addIterCount(self): iter_count = ConfigurationLineDefinition(keyword=KeywordDefinition("ITER_COUNT"), arguments=[IntegerArgument()], - documentation_link="analysis_module/iter_count", + documentation_link="keywords/iter_count", required=False, group=self.group) return iter_count + def addIterRetryCount(self): + retry_count = ConfigurationLineDefinition(keyword=KeywordDefinition("ITER_RETRY_COUNT"), + arguments=[IntegerArgument()], + documentation_link="keywords/iter_retry_count", + required=False, + group=self.group) + return retry_count + + def addStdCutoff(self): std_cutoff = ConfigurationLineDefinition(keyword=KeywordDefinition("STD_CUTOFF"), arguments=[FloatArgument()], - documentation_link="analysis_module/std_cutoff", + documentation_link="keywords/std_cutoff", required=False, group=self.group) return std_cutoff @@ -99,7 +100,7 @@ def addStdCutoff(self): def addSingleNodeUpdate(self): single_node_update = ConfigurationLineDefinition(keyword=KeywordDefinition("SINGLE_NODE_UPDATE"), arguments=[BoolArgument()], - documentation_link="analysis_module/single_node_update", + documentation_link="keywords/single_node_update", required=False, group=self.group) return single_node_update \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/CMakeLists.txt index 554b3d357f..2d04a160be 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/CMakeLists.txt @@ -7,8 +7,10 @@ set(PYTHON_SOURCES integer_argument.py keyword_definition.py path_argument.py + percent_argument.py proper_name_argument.py proper_name_format_argument.py + proper_name_format_string_argument.py range_string_argument.py string_argument.py ) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/__init__.py index c7328e0d1c..a0ca018085 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/__init__.py @@ -1,11 +1,13 @@ from .argument_definition import ArgumentDefinition from .integer_argument import IntegerArgument +from .percent_argument import PercentArgument from .string_argument import StringArgument from .bool_argument import BoolArgument from .float_argument import FloatArgument from .path_argument import PathArgument from .proper_name_argument import ProperNameArgument from .proper_name_format_argument import ProperNameFormatArgument +from .proper_name_format_string_argument import ProperNameFormatStringArgument from .range_string_argument import RangeStringArgument from .argument_definition import ArgumentDefinition diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/argument_definition.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/argument_definition.py index 515a0933b0..6d10bb5a09 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/argument_definition.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/argument_definition.py @@ -22,7 +22,7 @@ def consumeRestOfLine(self): def validate(self, token): vs = ValidationStatus() - if token.strip() == "": + if not self.isOptional() and token.strip() == "": vs.setFailed() vs.addToMessage(ArgumentDefinition.MISSING_ARGUMENT) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/path_argument.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/path_argument.py index cfc1ae59a1..b604fd42ef 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/path_argument.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/path_argument.py @@ -11,24 +11,40 @@ class PathArgument(ArgumentDefinition): PATTERN = re.compile("^[\S]+$") PATTERN_WITH_SPACE = re.compile("^[\S| ]+$") + DEFINES = {} def __init__(self, must_exist=True, **kwargs): super(PathArgument, self).__init__(**kwargs) self.__must_exist = must_exist + if not "" in PathArgument.DEFINES: + PathArgument.DEFINES[""] = "." + def validate(self, token): validation_status = super(PathArgument, self).validate(token) - if not os.path.exists(token): + token = PathArgument.substituteDefines(token) + + if self.__must_exist and not os.path.exists(token): validation_status.setFailed() validation_status.addToMessage(PathArgument.PATH_DOES_NOT_EXIST) return validation_status - - - + @staticmethod + def substituteDefines(token): + result = token + for key in PathArgument.DEFINES: + if result.find(key) != -1: + value = PathArgument.DEFINES[key] + result = result.replace(key, value) + return result + + @staticmethod + def addDefine(key, value): + value = PathArgument.substituteDefines(value) + PathArgument.DEFINES[key] = value diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/percent_argument.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/percent_argument.py new file mode 100644 index 0000000000..9f329971cb --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/percent_argument.py @@ -0,0 +1,56 @@ +import re +from ert_gui.ide.keywords.definitions import ArgumentDefinition + + +class PercentArgument(ArgumentDefinition): + + NOT_PERCENT = "The argument must be a number followed by % - no space allowed." + NOT_IN_RANGE = "The argument is not in range: %s" + + pattern = re.compile("^-?[0-9]+(\.[0-9]+)?\%$") + + def __init__(self, from_value=None, to_value=None, **kwargs): + super(PercentArgument, self).__init__(**kwargs) + self.from_value = from_value * 0.01 + self.to_value = to_value * 0.01 + + + def validate(self, token): + validation_status = super(PercentArgument, self).validate(token) + + match = PercentArgument.pattern.match(token) + + if match is None: + validation_status.setFailed() + validation_status.addToMessage(PercentArgument.NOT_PERCENT) + else: + value = float(token[:-1]) * 0.01 + + if self.from_value is not None and self.to_value is not None and not self.from_value <= value <= self.to_value: + validation_status.setFailed() + range_string = "%d <= %d <= %d" % (self.from_value, value, self.to_value) + validation_status.addToMessage(IntegerArgument.NOT_IN_RANGE % range_string) + + elif self.from_value is not None and self.from_value > value: + validation_status.setFailed() + range_string = "%d <= %d" % (self.from_value, value) + validation_status.addToMessage(IntegerArgument.NOT_IN_RANGE % range_string) + + elif self.to_value is not None and self.to_value < value: + validation_status.setFailed() + range_string = "%d <= %d" % (value, self.to_value) + validation_status.addToMessage(IntegerArgument.NOT_IN_RANGE % range_string) + + + if not validation_status.failed(): + validation_status.setValue(value) + + + return validation_status + + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/proper_name_format_string_argument.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/proper_name_format_string_argument.py new file mode 100644 index 0000000000..4eabbcd971 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/proper_name_format_string_argument.py @@ -0,0 +1,45 @@ +import re +from ert_gui.ide.keywords.definitions import ArgumentDefinition + + +''' +Keyword definition for proper names containing a string argument. +''' +class ProperNameFormatStringArgument(ArgumentDefinition): + + NOT_A_VALID_NAME_FORMAT = "The argument must be a valid string containing a %s and only characters of these types:" \ + "
    " \ + "
  • Letters: A-Z and a-z
    • " \ + "
  • Numbers: 0-9
    • " \ + "
  • Underscore: _
    • " \ + "
  • Dash: —
  • " \ + "
  • Period: .
    • " \ + "
  • Brackets: <>
    • " \ + "
" + + + PATTERN = re.compile("^[A-Za-z0-9_\-.<>]*(%s)[A-Za-z0-9_\-.<>]*$") + + + def __init__(self, **kwargs): + super(ProperNameFormatStringArgument, self).__init__(**kwargs) + + + def validate(self, token): + validation_status = super(ProperNameFormatStringArgument, self).validate(token) + + if not validation_status: + return validation_status + else: + match = ProperNameFormatStringArgument.PATTERN.match(token) + + if match is None: + validation_status.setFailed() + validation_status.addToMessage(ProperNameFormatStringArgument.NOT_A_VALID_NAME_FORMAT) + else: + + if not validation_status.failed(): + validation_status.setValue(token) + + return validation_status + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/string_argument.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/string_argument.py index 05b12c594c..760d26f018 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/string_argument.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/definitions/string_argument.py @@ -20,6 +20,8 @@ def validate(self, token): if not validation_status: return validation_status + elif self.isOptional() and token.strip() == "": + return validation_status else: if self.__allow_space: match = StringArgument.PATTERN_WITH_SPACE.match(token) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/eclipse_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/eclipse_keywords.py index 2b9446ac84..2386e78271 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/eclipse_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/eclipse_keywords.py @@ -23,7 +23,7 @@ def __init__(self, ert_keywords): def addDataFile(self): data_file = ConfigurationLineDefinition(keyword=KeywordDefinition("DATA_FILE"), arguments=[PathArgument()], - documentation_link="eclipse/data_file", + documentation_link="keywords/data_file", required=True, group=self.group) return data_file @@ -32,7 +32,7 @@ def addDataFile(self): def addEquilInitFile(self): equil_init_file = ConfigurationLineDefinition(keyword=KeywordDefinition("EQUIL_INIT_FILE"), arguments=[PathArgument()], - documentation_link="eclipse/equil_init_file", + documentation_link="keywords/equil_init_file", group=self.group) return equil_init_file @@ -41,7 +41,7 @@ def addEquilInitFile(self): def addEclBase(self): ecl_base = ConfigurationLineDefinition(keyword=KeywordDefinition("ECLBASE"), arguments=[StringArgument()], - documentation_link="eclipse/ecl_base", + documentation_link="keywords/eclbase", required=True, group=self.group) return ecl_base @@ -50,7 +50,7 @@ def addEclBase(self): def addJobName(self): job_name = ConfigurationLineDefinition(keyword=KeywordDefinition("JOBNAME"), arguments=[StringArgument()], - documentation_link="eclipse/job_name", + documentation_link="keywords/job_name", required=True, group=self.group) return job_name @@ -59,7 +59,7 @@ def addJobName(self): def addGrid(self): grid = ConfigurationLineDefinition(keyword=KeywordDefinition("GRID"), arguments=[PathArgument()], - documentation_link="eclipse/grid", + documentation_link="keywords/grid", required=True, group=self.group) return grid @@ -67,7 +67,7 @@ def addGrid(self): def addInitSection(self): init_section = ConfigurationLineDefinition(keyword=KeywordDefinition("INIT_SECTION"), arguments=[PathArgument()], - documentation_link="eclipse/init_section", + documentation_link="keywords/init_section", required=True, group=self.group) return init_section @@ -76,7 +76,7 @@ def addInitSection(self): def addScheduleFile(self): schedule_file = ConfigurationLineDefinition(keyword=KeywordDefinition("SCHEDULE_FILE"), arguments=[PathArgument()], - documentation_link="ensemble/schedule_file", + documentation_link="keywords/schedule_file", required=True, group=self.group) return schedule_file @@ -85,7 +85,7 @@ def addScheduleFile(self): def addIgnoreSchedule(self): ignore_schedule = ConfigurationLineDefinition(keyword=KeywordDefinition("IGNORE_SCHEDULE"), arguments=[BoolArgument()], - documentation_link="ensemble/ignore_schedule", + documentation_link="keywords/ignore_schedule", required=False, group=self.group) return ignore_schedule @@ -95,7 +95,7 @@ def addDataKw(self): data_kw = ConfigurationLineDefinition(keyword=KeywordDefinition("DATA_KW"), arguments=[StringArgument(), StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="ensemble/data_kw", + documentation_link="keywords/data_kw", required=False, group=self.group) return data_kw \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/enkf_control_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/enkf_control_keywords.py index d1e8058d80..efad1a52e2 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/enkf_control_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/enkf_control_keywords.py @@ -34,7 +34,7 @@ def __init__(self, ert_keywords): def addEnkfAlpha(self): enkf_alpha = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_ALPHA"), arguments=[FloatArgument()], - documentation_link="enkf_control/enkf_alpha", + documentation_link="keywords/enkf_alpha", required=False, group=self.group) return enkf_alpha @@ -44,7 +44,7 @@ def addEnkfAlpha(self): def addEnkfBootstrap(self): enkf_bootstrap = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_BOOTSTRAP"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_bootstrap", + documentation_link="keywords/enkf_bootstrap", required=False, group=self.group) return enkf_bootstrap @@ -54,7 +54,7 @@ def addEnkfBootstrap(self): def addEnkfCvFolds(self): enkf_cv_folds = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_CV_FOLDS"), arguments=[IntegerArgument()], - documentation_link="enkf_control/enkf_cv_folds", + documentation_link="keywords/enkf_cv_folds", required=False, group=self.group) return enkf_cv_folds @@ -64,7 +64,7 @@ def addEnkfCvFolds(self): def addEnkfForceNComp(self): enkf_force_ncomp = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_FORCE_NCOMP"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_force_ncomp", + documentation_link="keywords/enkf_force_ncomp", required=False, group=self.group) return enkf_force_ncomp @@ -73,7 +73,7 @@ def addEnkfForceNComp(self): def addEnkfLocalCv(self): enkf_local_cv = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_LOCAL_CV"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_local_cv", + documentation_link="keywords/enkf_local_cv", required=False, group=self.group) return enkf_local_cv @@ -82,7 +82,7 @@ def addEnkfLocalCv(self): def addEnkfPenPress(self): enkf_pen_press = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_PEN_PRESS"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_pen_press", + documentation_link="keywords/enkf_pen_press", required=False, group=self.group) return enkf_pen_press @@ -92,7 +92,7 @@ def addEnkfPenPress(self): def addEnkfMode(self): enkf_mode = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_MODE"), arguments=[StringArgument(built_in=True)], - documentation_link="enkf_control/enkf_mode", + documentation_link="keywords/enkf_mode", required=False, group=self.group) return enkf_mode @@ -102,7 +102,7 @@ def addEnkfMode(self): def addMergeObservations(self): enkf_merge_observations = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_MERGE_OBSERVATIONS"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_merge_observations", + documentation_link="keywords/enkf_merge_observations", required=False, group=self.group) return enkf_merge_observations @@ -112,7 +112,7 @@ def addMergeObservations(self): def addEnkfNComp(self): enkf_ncomp = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_NCOMP"), arguments=[IntegerArgument()], - documentation_link="enkf_control/enkf_ncomp", + documentation_link="keywords/enkf_ncomp", required=False, group=self.group) return enkf_ncomp @@ -121,7 +121,7 @@ def addEnkfNComp(self): def addEnkfRerun(self): enkf_rerun = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_RERUN"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_rerun", + documentation_link="keywords/enkf_rerun", required=False, group=self.group) return enkf_rerun @@ -130,7 +130,7 @@ def addEnkfRerun(self): def addRerunStart(self): rerun_start = ConfigurationLineDefinition(keyword=KeywordDefinition("RERUN_START"), arguments=[IntegerArgument()], - documentation_link="enkf_control/rerun_start", + documentation_link="keywords/rerun_start", required=False, group=self.group) return rerun_start @@ -140,7 +140,7 @@ def addRerunStart(self): def addEnkfScaling(self): enkf_scaling = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_SCALING"), arguments=[BoolArgument()], - documentation_link="enkf_control/enkf_scaling", + documentation_link="keywords/enkf_scaling", required=False, group=self.group) return enkf_scaling @@ -150,7 +150,7 @@ def addEnkfScaling(self): def addEnkfTruncation(self): enkf_truncation = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_TRUNCATION"), arguments=[FloatArgument()], - documentation_link="enkf_control/enkf_truncation", + documentation_link="keywords/enkf_truncation", required=False, group=self.group) return enkf_truncation @@ -160,7 +160,7 @@ def addEnkfTruncation(self): def addUpdateLogPath(self): update_log_path = ConfigurationLineDefinition(keyword=KeywordDefinition("UPDATE_LOG_PATH"), arguments=[PathArgument()], - documentation_link="enkf_control/update_log_path", + documentation_link="keywords/update_log_path", required=False, group=self.group) return update_log_path @@ -169,7 +169,7 @@ def addUpdateLogPath(self): def addUpdateResults(self): update_results = ConfigurationLineDefinition(keyword=KeywordDefinition("UPDATE_RESULTS"), arguments=[BoolArgument()], - documentation_link="enkf_control/update_results", + documentation_link="keywords/update_results", required=False, group=self.group) return update_results @@ -178,7 +178,7 @@ def addUpdateResults(self): def addEnkfCrossValidation(self): cross_validation = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_CROSS_VALIDATION"), arguments=[StringArgument()], - documentation_link="enkf_control/enkf_cross_validation", + documentation_link="keywords/enkf_cross_validation", required=False, group=self.group) return cross_validation @@ -187,7 +187,7 @@ def addEnkfCrossValidation(self): def addEnkfKernelRegression(self): kernel_regression = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_KERNEL_REGRESSION"), arguments=[StringArgument()], - documentation_link="enkf_control/enkf_kernel_regression", + documentation_link="keywords/enkf_kernel_regression", required=False, group=self.group) return kernel_regression @@ -196,7 +196,7 @@ def addEnkfKernelRegression(self): def addEnkfKernelFunction(self): kernel_function = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_KERNEL_FUNCTION"), arguments=[StringArgument()], - documentation_link="enkf_control/enkf_kernel_function", + documentation_link="keywords/enkf_kernel_function", required=False, group=self.group) return kernel_function @@ -205,7 +205,7 @@ def addEnkfKernelFunction(self): def addEnkfKernelParam(self): kernel_param = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_KERNEL_PARAM"), arguments=[StringArgument()], - documentation_link="enkf_control/enkf_kernel_param", + documentation_link="keywords/enkf_kernel_param", required=False, group=self.group) return kernel_param @@ -214,7 +214,7 @@ def addEnkfKernelParam(self): def addEnkfSchedFile(self): sched_file = ConfigurationLineDefinition(keyword=KeywordDefinition("ENKF_SCHED_FILE"), arguments=[PathArgument()], - documentation_link="enkf_control/enkf_sched_file", + documentation_link="keywords/enkf_sched_file", required=False, group=self.group) return sched_file @@ -224,7 +224,7 @@ def addEnkfSchedFile(self): def addCaseTable(self): case_table = ConfigurationLineDefinition(keyword=KeywordDefinition("CASE_TABLE"), arguments=[StringArgument()], - documentation_link="enkf_control/case_table", + documentation_link="keywords/case_table", required=False, group=self.group) return case_table @@ -233,7 +233,7 @@ def addCaseTable(self): def addContainer(self): container = ConfigurationLineDefinition(keyword=KeywordDefinition("CONTAINER"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="enkf_control/container", + documentation_link="keywords/container", required=False, group=self.group) return container diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/ensemble_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/ensemble_keywords.py index 7ad5084e85..f85e3dbfa2 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/ensemble_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/ensemble_keywords.py @@ -26,7 +26,7 @@ def __init__(self, ert_keywords): def addNumRealizations(self): num_realizations = ConfigurationLineDefinition(keyword=KeywordDefinition("NUM_REALIZATIONS"), arguments=[IntegerArgument(from_value=1)], - documentation_link="ensemble/num_realizations", + documentation_link="keywords/num_realizations", required=True, group=self.group) return num_realizations @@ -35,7 +35,7 @@ def addNumRealizations(self): def addEndDate(self): end_date = ConfigurationLineDefinition(keyword=KeywordDefinition("END_DATE"), arguments=[StringArgument()], - documentation_link="ensemble/end_date", + documentation_link="keywords/end_date", required=False, group=self.group) return end_date @@ -44,7 +44,7 @@ def addEndDate(self): def addEnsPath(self): ens_path = ConfigurationLineDefinition(keyword=KeywordDefinition("ENSPATH"), arguments=[PathArgument()], - documentation_link="ensemble/enspath", + documentation_link="keywords/enspath", required=False, group=self.group) return ens_path @@ -54,7 +54,7 @@ def addEnsPath(self): def addSelectCase(self): select_case = ConfigurationLineDefinition(keyword=KeywordDefinition("SELECT_CASE"), arguments=[StringArgument()], - documentation_link="ensemble/select_case", + documentation_link="keywords/select_case", required=False, group=self.group) return select_case @@ -63,7 +63,7 @@ def addSelectCase(self): def addHistorySource(self): history_source = ConfigurationLineDefinition(keyword=KeywordDefinition("HISTORY_SOURCE"), arguments=[StringArgument(built_in=True)], - documentation_link="ensemble/history_source", + documentation_link="keywords/history_source", required=False, group=self.group) return history_source @@ -72,7 +72,7 @@ def addHistorySource(self): def addRefCase(self): refcase = ConfigurationLineDefinition(keyword=KeywordDefinition("REFCASE"), arguments=[PathArgument()], - documentation_link="ensemble/refcase", + documentation_link="keywords/refcase", required=False, group=self.group) return refcase @@ -81,7 +81,7 @@ def addRefCase(self): def addRefcaseList(self): refcase_list = ConfigurationLineDefinition(keyword=KeywordDefinition("REFCASE_LIST"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="ensemble/refcase_list", + documentation_link="keywords/refcase_list", required=False, group=self.group) return refcase_list @@ -91,7 +91,7 @@ def addRefcaseList(self): def addInclude(self): include = ConfigurationLineDefinition(keyword=KeywordDefinition("INCLUDE"), arguments=[PathArgument()], - documentation_link="ensemble/include", + documentation_link="keywords/include", required=False, group=self.group) return include @@ -101,7 +101,7 @@ def addInclude(self): def addObsConfig(self): obs_config = ConfigurationLineDefinition(keyword=KeywordDefinition("OBS_CONFIG"), arguments=[PathArgument()], - documentation_link="ensemble/obs_config", + documentation_link="keywords/obs_config", required=False, group=self.group) return obs_config @@ -110,7 +110,7 @@ def addObsConfig(self): def addResultPath(self): result_path = ConfigurationLineDefinition(keyword=KeywordDefinition("RESULT_PATH"), arguments=[PathArgument()], - documentation_link="ensemble/result_path", + documentation_link="keywords/result_path", required=False, group=self.group) return result_path @@ -119,7 +119,7 @@ def addResultPath(self): def addLicensePath(self): license_path = ConfigurationLineDefinition(keyword=KeywordDefinition("LICENSE_PATH"), arguments=[PathArgument()], - documentation_link="ensemble/license_path", + documentation_link="keywords/license_path", required=False, group=self.group) return license_path @@ -128,7 +128,7 @@ def addLicensePath(self): def addLocalConfig(self): local_config = ConfigurationLineDefinition(keyword=KeywordDefinition("LOCAL_CONFIG"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="ensemble/local_config", + documentation_link="keywords/local_config", required=False, group=self.group) return local_config diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/parametrization_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/parametrization_keywords.py index 378a17eb37..baac76ee3c 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/parametrization_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/parametrization_keywords.py @@ -16,6 +16,7 @@ def __init__(self, ert_keywords): ert_keywords.addKeyword(self.addLoadSeed()) ert_keywords.addKeyword(self.addGenKwTagFormat()) ert_keywords.addKeyword(self.addSurface()) + ert_keywords.addKeyword(self.addGenKwExportFile()) @@ -25,7 +26,7 @@ def addField(self): arguments=[StringArgument(), StringArgument(), StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="parametrization/field", + documentation_link="keywords/field", required=False, group=self.group) return field @@ -37,7 +38,7 @@ def addGenData(self): arguments=[StringArgument(), StringArgument(), StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="parametrization/gen_data", + documentation_link="keywords/gen_data", required=False, group=self.group) return gen_data @@ -48,16 +49,25 @@ def addGenKw(self): arguments=[StringArgument(), StringArgument(), StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="parametrization/gen_kw", + documentation_link="keywords/gen_kw", required=False, group=self.group) return gen_kw + def addGenKwExportFile(self): + gen_kw_export_file = ConfigurationLineDefinition(keyword=KeywordDefinition("GEN_KW_EXPORT_FILE"), + arguments=[StringArgument()], + documentation_link="keywords/gen_kw_export_file", + required=False, + group=self.group) + return gen_kw_export_file + + def addGenKwTagFormat(self): gen_kw_tag_format = ConfigurationLineDefinition(keyword=KeywordDefinition("GEN_KW_TAG_FORMAT"), arguments=[StringArgument(built_in=True,allow_space=True)], - documentation_link="parametrization/gen_kw_tag_format", + documentation_link="keywords/gen_kw_tag_format", required=False, group=self.group) return gen_kw_tag_format @@ -68,7 +78,7 @@ def addGenParam(self): arguments=[StringArgument(), StringArgument(), StringArgument(built_in=True,allow_space=True)], - documentation_link="parametrization/gen_param", + documentation_link="keywords/gen_param", required=False, group=self.group) return gen_param @@ -77,7 +87,7 @@ def addGenParam(self): def addSummary(self): summary = ConfigurationLineDefinition(keyword=KeywordDefinition("SUMMARY"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="parametrization/summary", + documentation_link="keywords/summary", required=False, group=self.group) return summary @@ -85,7 +95,7 @@ def addSummary(self): def addDBaseType(self): dbase_type = ConfigurationLineDefinition(keyword=KeywordDefinition("DBASE_TYPE"), arguments=[StringArgument()], - documentation_link="parametrization/dbase_type", + documentation_link="keywords/dbase_type", required=False, group=self.group) return dbase_type @@ -94,7 +104,7 @@ def addDBaseType(self): def addStoreSeed(self): store_seed = ConfigurationLineDefinition(keyword=KeywordDefinition("STORE_SEED"), arguments=[StringArgument(built_in=True)], - documentation_link="parametrization/store_seed", + documentation_link="keywords/store_seed", required=False, group=self.group) return store_seed @@ -103,7 +113,7 @@ def addStoreSeed(self): def addLoadSeed(self): load_seed = ConfigurationLineDefinition(keyword=KeywordDefinition("LOAD_SEED"), arguments=[StringArgument(built_in=True)], - documentation_link="parametrization/load_seed", + documentation_link="keywords/load_seed", required=False, group=self.group) return load_seed @@ -112,7 +122,7 @@ def addLoadSeed(self): def addSurface(self): surface = ConfigurationLineDefinition(keyword=KeywordDefinition("SURFACE"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="parametrization/surface", + documentation_link="keywords/surface", required=False, group=self.group) return surface \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/plot_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/plot_keywords.py index d269549d25..b4a70291db 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/plot_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/plot_keywords.py @@ -24,7 +24,7 @@ def __init__(self, ert_keywords): def addImageViewer(self): image_viewer = ConfigurationLineDefinition(keyword=KeywordDefinition("IMAGE_VIEWER"), arguments=[PathArgument()], - documentation_link="plot/image_viewer", + documentation_link="keywords/image_viewer", required=False, group=self.group) return image_viewer @@ -33,7 +33,7 @@ def addImageViewer(self): def addImageType(self): image_type = ConfigurationLineDefinition(keyword=KeywordDefinition("IMAGE_TYPE"), arguments=[StringArgument(built_in=True)], - documentation_link="plot/image_type", + documentation_link="keywords/image_type", required=False, group=self.group) return image_type @@ -42,7 +42,7 @@ def addImageType(self): def addPlotDriver(self): plot_driver = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_DRIVER"), arguments=[StringArgument(built_in=True)], - documentation_link="plot/plot_driver", + documentation_link="keywords/plot_driver", required=False, group=self.group) return plot_driver @@ -51,7 +51,7 @@ def addPlotDriver(self): def addPlotErrorbar(self): plot_errorbar = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_ERRORBAR"), arguments=[BoolArgument()], - documentation_link="plot/plot_errorbar", + documentation_link="keywords/plot_errorbar", required=False, group=self.group) return plot_errorbar @@ -61,7 +61,7 @@ def addPlotErrorbar(self): def addPlotErrorbarMax(self): plot_errorbar_max = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_ERRORBAR_MAX"), arguments=[IntegerArgument()], - documentation_link="plot/plot_errorbar_max", + documentation_link="keywords/plot_errorbar_max", required=False, group=self.group) return plot_errorbar_max @@ -71,7 +71,7 @@ def addPlotErrorbarMax(self): def addPlotWidth(self): plot_width = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_WIDTH"), arguments=[IntegerArgument()], - documentation_link="plot/plot_width", + documentation_link="keywords/plot_width", required=False, group=self.group) return plot_width @@ -80,7 +80,7 @@ def addPlotWidth(self): def addPlotHeight(self): plot_height = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_HEIGHT"), arguments=[IntegerArgument()], - documentation_link="plot/plot_height", + documentation_link="keywords/plot_height", required=False, group=self.group) return plot_height @@ -90,7 +90,7 @@ def addPlotHeight(self): def addPlotRefcase(self): plot_refcase = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_REFCASE"), arguments=[BoolArgument()], - documentation_link="plot/plot_refcase", + documentation_link="keywords/plot_refcase", required=False, group=self.group) return plot_refcase @@ -100,7 +100,7 @@ def addPlotRefcase(self): def addPlotRefcaseList(self): plot_refcase_list = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_REFCASE_LIST"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="plot/plot_refcase_list", + documentation_link="keywords/plot_refcase_list", required=False, group=self.group) return plot_refcase_list @@ -108,8 +108,8 @@ def addPlotRefcaseList(self): def addPlotPath(self): plot_path = ConfigurationLineDefinition(keyword=KeywordDefinition("PLOT_PATH"), - arguments=[PathArgument()], - documentation_link="plot/plot_path", + arguments=[PathArgument(must_exist=False)], + documentation_link="keywords/plot_path", required=False, group=self.group) return plot_path @@ -119,7 +119,7 @@ def addPlotPath(self): def addRftConfig(self): rft_config = ConfigurationLineDefinition(keyword=KeywordDefinition("RFT_CONFIG"), arguments=[PathArgument()], - documentation_link="plot/rft_config", + documentation_link="keywords/rft_config", required=False, group=self.group) return rft_config @@ -128,7 +128,7 @@ def addRftConfig(self): def addRftPath(self): rft_path = ConfigurationLineDefinition(keyword=KeywordDefinition("RFTPATH"), arguments=[PathArgument()], - documentation_link="plot/rftpath", + documentation_link="keywords/rftpath", required=False, group=self.group) return rft_path diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/qc_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/qc_keywords.py index 144db421e5..8838c35185 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/qc_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/qc_keywords.py @@ -15,7 +15,7 @@ def __init__(self, ert_keywords): def addQCWorkflow(self): qc_workflow = ConfigurationLineDefinition(keyword=KeywordDefinition("QC_WORKFLOW"), arguments=[StringArgument()], - documentation_link="qc/qc_workflow", + documentation_link="keywords/qc_workflow", required=False, group=self.group) return qc_workflow @@ -25,7 +25,7 @@ def addQCWorkflow(self): def addQCPath(self): qc_path = ConfigurationLineDefinition(keyword=KeywordDefinition("QC_PATH"), arguments=[PathArgument()], - documentation_link="qc/qc_path", + documentation_link="keywords/qc_path", required=False, group=self.group) return qc_path \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/queue_system_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/queue_system_keywords.py index 17786b44ab..7158b12127 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/queue_system_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/queue_system_keywords.py @@ -31,7 +31,7 @@ def addQueueOption(self): StringArgument(built_in=True), StringArgument(allow_space=True, rest_of_line=True) ], - documentation_link="queue_system/queue_option", + documentation_link="keywords/queue_option", group=self.group) return queue_option @@ -41,7 +41,7 @@ def addQueueOption(self): def addQueueSystem(self): queue_system = ConfigurationLineDefinition(keyword = KeywordDefinition("QUEUE_SYSTEM"), arguments=[StringArgument(built_in=True)], - documentation_link="queue_system/queue_system", + documentation_link="keywords/queue_system", group=self.group) return queue_system @@ -49,7 +49,7 @@ def addQueueSystem(self): def addLsfServer(self): lsf_server = ConfigurationLineDefinition(keyword = KeywordDefinition("LSF_SERVER"), arguments=[StringArgument(built_in=True)], - documentation_link="queue_system/lsf_server", + documentation_link="keywords/lsf_server", group=self.group) return lsf_server @@ -58,7 +58,7 @@ def addLsfServer(self): def addLsfQueue(self): lsf_queue = ConfigurationLineDefinition(keyword = KeywordDefinition("LSF_QUEUE"), arguments=[StringArgument()], - documentation_link="queue_system/lsf_queue", + documentation_link="keywords/lsf_queue", group=self.group) return lsf_queue @@ -66,7 +66,7 @@ def addLsfQueue(self): def addMaxRunningLsf(self): max_running_lsf = ConfigurationLineDefinition(keyword = KeywordDefinition("MAX_RUNNING_LSF"), arguments=[IntegerArgument(from_value=1)], - documentation_link="queue_system/max_running_lsf", + documentation_link="keywords/max_running_lsf", group=self.group) return max_running_lsf @@ -74,7 +74,7 @@ def addMaxRunningLsf(self): def addLsfResources(self): lsf_resources = ConfigurationLineDefinition(keyword = KeywordDefinition("LSF_RESOURCES"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="queue_system/lsf_resources", + documentation_link="keywords/lsf_resources", group=self.group) return lsf_resources @@ -82,7 +82,7 @@ def addLsfResources(self): def addTorqueQueue(self): torque_queue = ConfigurationLineDefinition(keyword = KeywordDefinition("TORQUE_QUEUE"), arguments=[StringArgument()], - documentation_link="queue_system/torque_queue", + documentation_link="keywords/torque_queue", group=self.group) return torque_queue @@ -90,7 +90,7 @@ def addTorqueQueue(self): def addMaxRunningLocal(self): max_running_local = ConfigurationLineDefinition(keyword = KeywordDefinition("MAX_RUNNING_LOCAL"), arguments=[IntegerArgument(from_value=1)], - documentation_link="queue_system/max_running_local", + documentation_link="keywords/max_running_local", group=self.group) return max_running_local @@ -98,7 +98,7 @@ def addMaxRunningLocal(self): def addRshHost(self): rsh_host = ConfigurationLineDefinition(keyword = KeywordDefinition("RSH_HOST"), arguments=[StringArgument(), StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="queue_system/rsh_host", + documentation_link="keywords/rsh_host", group=self.group) return rsh_host @@ -106,7 +106,7 @@ def addRshHost(self): def addRshCommand(self): rsh_command = ConfigurationLineDefinition(keyword = KeywordDefinition("RSH_COMMAND"), arguments=[PathArgument()], - documentation_link="queue_system/rsh_command", + documentation_link="keywords/rsh_command", group=self.group) return rsh_command @@ -114,7 +114,7 @@ def addRshCommand(self): def addMaxRunningRsh(self): max_running_rsh = ConfigurationLineDefinition(keyword = KeywordDefinition("MAX_RUNNING_RSH"), arguments=[IntegerArgument()], - documentation_link="queue_system/max_running_rsh", + documentation_link="keywords/max_running_rsh", group=self.group) return max_running_rsh @@ -123,6 +123,6 @@ def addMaxRunningRsh(self): def addHostType(self): host_type = ConfigurationLineDefinition(keyword = KeywordDefinition("HOST_TYPE"), arguments=[StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="queue_system/host_type", + documentation_link="keywords/host_type", group=self.group) return host_type diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/report_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/report_keywords.py index 4711341387..34e49ebd3e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/report_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/report_keywords.py @@ -21,7 +21,7 @@ def __init__(self, ert_keywords): def addReportContext(self): report_context = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_CONTEXT"), arguments=[StringArgument(), StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="report/report_context", + documentation_link="keywords/report_context", required=False, group=self.group) return report_context @@ -30,7 +30,7 @@ def addReportContext(self): def addReportList(self): report_list = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_LIST"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="report/report_list", + documentation_link="keywords/report_list", required=False, group=self.group) return report_list @@ -39,7 +39,7 @@ def addReportList(self): def addReportPath(self): report_path = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_PATH"), arguments=[PathArgument()], - documentation_link="report/report_path", + documentation_link="keywords/report_path", required=False, group=self.group) return report_path @@ -50,7 +50,7 @@ def addReportPath(self): def addReportSearchPath(self): report_search_path = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_SEARCH_PATH"), arguments=[StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="report/report_search_path", + documentation_link="keywords/report_search_path", required=False, group=self.group) return report_search_path @@ -59,7 +59,7 @@ def addReportSearchPath(self): def addReportWellList(self): report_well_list = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_WELL_LIST"), arguments=[StringArgument(),StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="report/report_well_list", + documentation_link="keywords/report_well_list", required=False, group=self.group) return report_well_list @@ -68,7 +68,7 @@ def addReportWellList(self): def addReportGroupList(self): report_group_list = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_GROUP_LIST"), arguments=[StringArgument(),StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="report/report_group_list", + documentation_link="keywords/report_group_list", required=False, group=self.group) return report_group_list @@ -76,7 +76,7 @@ def addReportGroupList(self): def addReportTimeout(self): report_timeout = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_TIMEOUT"), arguments=[IntegerArgument()], - documentation_link="report/report_timeout", + documentation_link="keywords/report_timeout", required=False, group=self.group) return report_timeout @@ -85,7 +85,7 @@ def addReportTimeout(self): def addReportLarge(self): report_large = ConfigurationLineDefinition(keyword=KeywordDefinition("REPORT_LARGE"), arguments=[BoolArgument()], - documentation_link="report/report_large", + documentation_link="keywords/report_large", required=False, group=self.group) return report_large \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/run_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/run_keywords.py index 75a833503b..7043da7eb6 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/run_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/run_keywords.py @@ -10,7 +10,6 @@ def __init__(self, ert_keywords): ert_keywords.addKeyword(self.addKeepRunpath()) ert_keywords.addKeyword(self.addInstallJob()) ert_keywords.addKeyword(self.addRunpath()) - ert_keywords.addKeyword(self.addRerunPath()) ert_keywords.addKeyword(self.addRunpathFile()) ert_keywords.addKeyword(self.addForwardModel()) ert_keywords.addKeyword(self.addJobScript()) @@ -28,7 +27,7 @@ def __init__(self, ert_keywords): def addInstallJob(self): install_job = ConfigurationLineDefinition(keyword=KeywordDefinition("INSTALL_JOB"), arguments=[StringArgument(),PathArgument()], - documentation_link="run/install_job", + documentation_link="keywords/install_job", required=False, group=self.group) return install_job @@ -38,7 +37,7 @@ def addInstallJob(self): def addDeleteRunpath(self): delete_runpath = ConfigurationLineDefinition(keyword=KeywordDefinition("DELETE_RUNPATH"), arguments=[StringArgument()], - documentation_link="run/delete_runpath", + documentation_link="keywords/delete_runpath", required=False, group=self.group) return delete_runpath @@ -47,7 +46,7 @@ def addDeleteRunpath(self): def addKeepRunpath(self): keep_runpath = ConfigurationLineDefinition(keyword=KeywordDefinition("KEEP_RUNPATH"), arguments=[StringArgument()], - documentation_link="run/keep_runpath", + documentation_link="keywords/keep_runpath", required=False, group=self.group) return keep_runpath @@ -58,27 +57,18 @@ def addKeepRunpath(self): def addRunpath(self): runpath = ConfigurationLineDefinition(keyword=KeywordDefinition("RUNPATH"), - arguments=[PathArgument()], - documentation_link="run/runpath", + arguments=[PathArgument(must_exist=False)], + documentation_link="keywords/runpath", required=False, group=self.group) return runpath - def addRerunPath(self): - rerun_path = ConfigurationLineDefinition(keyword=KeywordDefinition("RERUN_PATH"), - arguments=[PathArgument()], - documentation_link="run/rerun_path", - required=False, - group=self.group) - return rerun_path - - def addRunpathFile(self): runpath_file = ConfigurationLineDefinition(keyword=KeywordDefinition("RUNPATH_FILE"), arguments=[PathArgument()], - documentation_link="run/runpath_file", + documentation_link="keywords/runpath_file", required=False, group=self.group) return runpath_file @@ -87,7 +77,7 @@ def addRunpathFile(self): def addForwardModel(self): forward_model = ConfigurationLineDefinition(keyword=KeywordDefinition("FORWARD_MODEL"), arguments=[StringArgument(rest_of_line=True, allow_space=True)], - documentation_link="run/forward_model", + documentation_link="keywords/forward_model", required=False, group=self.group) return forward_model @@ -95,7 +85,7 @@ def addForwardModel(self): def addJobScript(self): job_script = ConfigurationLineDefinition(keyword=KeywordDefinition("JOB_SCRIPT"), arguments=[PathArgument()], - documentation_link="run/job_script", + documentation_link="keywords/job_script", required=False, group=self.group) return job_script @@ -103,7 +93,7 @@ def addJobScript(self): def addRunTemplate(self): run_template = ConfigurationLineDefinition(keyword=KeywordDefinition("RUN_TEMPLATE"), arguments=[PathArgument(),StringArgument()], - documentation_link="run/run_template", + documentation_link="keywords/run_template", required=False, group=self.group) return run_template @@ -112,7 +102,7 @@ def addRunTemplate(self): def addLogLevel(self): log_level = ConfigurationLineDefinition(keyword=KeywordDefinition("LOG_LEVEL"), arguments=[IntegerArgument()], - documentation_link="run/log_level", + documentation_link="keywords/log_level", required=False, group=self.group) return log_level @@ -121,7 +111,7 @@ def addLogLevel(self): def addLogFile(self): log_file = ConfigurationLineDefinition(keyword=KeywordDefinition("LOG_FILE"), arguments=[PathArgument()], - documentation_link="run/log_file", + documentation_link="keywords/log_file", required=False, group=self.group) return log_file @@ -131,7 +121,7 @@ def addLogFile(self): def addMaxSubmit(self): max_submit = ConfigurationLineDefinition(keyword = KeywordDefinition("MAX_SUBMIT"), arguments=[IntegerArgument()], - documentation_link="run/max_submit", + documentation_link="keywords/max_submit", group=self.group) return max_submit @@ -139,7 +129,7 @@ def addMaxSubmit(self): def addMaxResample(self): max_resample = ConfigurationLineDefinition(keyword=KeywordDefinition("MAX_RESAMPLE"), arguments=[IntegerArgument()], - documentation_link="run/max_resample", + documentation_link="keywords/max_resample", required=False, group=self.group) return max_resample @@ -148,7 +138,7 @@ def addMaxResample(self): def addPreClearRunpath(self): pre_clear_runpath = ConfigurationLineDefinition(keyword=KeywordDefinition("PRE_CLEAR_RUNPATH"), arguments=[BoolArgument()], - documentation_link="run/pre_clear_runpath", + documentation_link="keywords/pre_clear_runpath", required=False, group=self.group) return pre_clear_runpath \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/simulation_control_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/simulation_control_keywords.py index 52689d0005..35fb78a419 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/simulation_control_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/simulation_control_keywords.py @@ -1,4 +1,4 @@ -from ert_gui.ide.keywords.definitions import IntegerArgument, BoolArgument, ConfigurationLineDefinition, KeywordDefinition +from ert_gui.ide.keywords.definitions import IntegerArgument, BoolArgument, StringArgument, ConfigurationLineDefinition, KeywordDefinition , PercentArgument class SimulationControlKeywords(object): @@ -16,7 +16,7 @@ def __init__(self, ert_keywords): def addMaxRuntime(self): max_runtime = ConfigurationLineDefinition(keyword=KeywordDefinition("MAX_RUNTIME"), arguments=[IntegerArgument(from_value=0)], - documentation_link="control_simulations/max_runtime", + documentation_link="keywords/max_runtime", required=False, group=self.group) return max_runtime @@ -26,17 +26,18 @@ def addMaxRuntime(self): def addMinRealizations(self): min_realizations = ConfigurationLineDefinition(keyword=KeywordDefinition("MIN_REALIZATIONS"), - arguments=[IntegerArgument(from_value=1)], - documentation_link="control_simulations/min_realizations", - required=False, - group=self.group) + arguments=[IntegerArgument(from_value = 0) , + PercentArgument(from_value = 0 , to_value = 100)], + documentation_link="keywords/min_realizations", + required=False, + group=self.group) return min_realizations def addStopLongRunning(self): stop_long_running = ConfigurationLineDefinition(keyword=KeywordDefinition("STOP_LONG_RUNNING"), arguments=[BoolArgument()], - documentation_link="control_simulations/stop_long_running", + documentation_link="keywords/stop_long_running", required=False, group=self.group) return stop_long_running diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/unix_environment_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/unix_environment_keywords.py index 8598c72117..835a3b3b55 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/unix_environment_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/unix_environment_keywords.py @@ -16,7 +16,7 @@ def __init__(self, ert_keywords): def addSetEnv(self): setenv = ConfigurationLineDefinition(keyword=KeywordDefinition("SETENV"), arguments=[StringArgument(), StringArgument(rest_of_line=True,allow_space=True)], - documentation_link="unix_environment/setenv", + documentation_link="keywords/setenv", required=False, group=self.group) return setenv @@ -25,7 +25,7 @@ def addSetEnv(self): def addUMask(self): umask = ConfigurationLineDefinition(keyword=KeywordDefinition("UMASK"), arguments=[IntegerArgument()], - documentation_link="unix_environment/umask", + documentation_link="keywords/umask", required=False, group=self.group) return umask @@ -34,7 +34,7 @@ def addUMask(self): def addUpdatePath(self): update_path = ConfigurationLineDefinition(keyword=KeywordDefinition("UPDATE_PATH"), arguments=[StringArgument(built_in=True), PathArgument()], - documentation_link="unix_environment/update_path", + documentation_link="keywords/update_path", required=False, group=self.group) return update_path diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/workflow_keywords.py b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/workflow_keywords.py index cd57b82711..0566d20a5f 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/workflow_keywords.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/ide/keywords/workflow_keywords.py @@ -22,7 +22,7 @@ def __init__(self, ert_keywords): def addInternal(self): internal = ConfigurationLineDefinition(keyword=KeywordDefinition("INTERNAL"), arguments=[BoolArgument()], - documentation_link="workflow_jobs/internal", + documentation_link="keywords/internal", required=False, group=self.group) return internal @@ -31,7 +31,7 @@ def addInternal(self): def addFunction(self): function = ConfigurationLineDefinition(keyword=KeywordDefinition("FUNCTION"), arguments=[StringArgument()], - documentation_link="workflow_jobs/function", + documentation_link="keywords/function", required=False, group=self.group) return function @@ -40,7 +40,7 @@ def addFunction(self): def addModule(self): module = ConfigurationLineDefinition(keyword=KeywordDefinition("MODULE"), arguments=[PathArgument()], - documentation_link="workflow_jobs/module", + documentation_link="keywords/module", required=False, group=self.group) return module @@ -49,7 +49,7 @@ def addModule(self): def addExecutable(self): executable = ConfigurationLineDefinition(keyword=KeywordDefinition("EXECUTABLE"), arguments=[PathArgument()], - documentation_link="workflow_jobs/executable", + documentation_link="keywords/executable", required=False, group=self.group) return executable @@ -60,7 +60,7 @@ def addExecutable(self): def addMinArg(self): min_arg = ConfigurationLineDefinition(keyword=KeywordDefinition("MIN_ARG"), arguments=[IntegerArgument()], - documentation_link="workflow_jobs/min_arg", + documentation_link="keywords/min_arg", required=False, group=self.group) return min_arg @@ -71,7 +71,7 @@ def addMinArg(self): def addMaxArg(self): max_arg = ConfigurationLineDefinition(keyword=KeywordDefinition("MAX_ARG"), arguments=[IntegerArgument()], - documentation_link="workflow_jobs/max_arg", + documentation_link="keywords/max_arg", required=False, group=self.group) return max_arg @@ -81,7 +81,7 @@ def addMaxArg(self): def addArgType(self): arg_type = ConfigurationLineDefinition(keyword=KeywordDefinition("ARG_TYPE"), arguments=[StringArgument(built_in=True)], - documentation_link="workflow_jobs/arg_type", + documentation_link="keywords/arg_type", required=False, group=self.group) return arg_type @@ -90,7 +90,7 @@ def addArgType(self): def addLoadWorkflowJob(self): load_workflow_job = ConfigurationLineDefinition(keyword=KeywordDefinition("LOAD_WORKFLOW_JOB"), arguments=[StringArgument()], - documentation_link="workflow_jobs/load_workflow_job", + documentation_link="keywords/load_workflow_job", required=False, group=self.group) return load_workflow_job @@ -100,7 +100,7 @@ def addLoadWorkflowJob(self): def addWorkflowJobDirectory(self): workflow_job_directory = ConfigurationLineDefinition(keyword=KeywordDefinition("WORKFLOW_JOB_DIRECTORY"), arguments=[PathArgument()], - documentation_link="workflow_jobs/workflow_job_directory", + documentation_link="keywords/workflow_job_directory", required=False, group=self.group) return workflow_job_directory @@ -108,8 +108,8 @@ def addWorkflowJobDirectory(self): def addLoadWorkflow(self): load_workflow = ConfigurationLineDefinition(keyword=KeywordDefinition("LOAD_WORKFLOW"), - arguments=[PathArgument()], - documentation_link="workflow_jobs/load_workflow", + arguments=[PathArgument(), StringArgument(optional=True)], + documentation_link="keywords/load_workflow", required=False, group=self.group) return load_workflow \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/main_window.py b/ThirdParty/Ert/devel/python/python/ert_gui/main_window.py index 2b42dadb8d..7625ba4146 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/main_window.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/main_window.py @@ -1,5 +1,6 @@ from PyQt4.QtCore import QSettings, Qt -from PyQt4.QtGui import QMainWindow, qApp, QWidget, QVBoxLayout +from PyQt4.QtGui import QMainWindow, qApp, QWidget, QVBoxLayout, QDockWidget, QAction +from ert_gui.about_dialog import AboutDialog class GertMainWindow(QMainWindow): @@ -9,7 +10,9 @@ def __init__(self): self.tools = {} self.resize(300, 700) - self.setWindowTitle('gERT') + self.setWindowTitle('ERT') + + self.__main_widget = None self.central_widget = QWidget() self.central_layout = QVBoxLayout() @@ -21,38 +24,54 @@ def __init__(self): self.toolbar.setObjectName("Toolbar") self.toolbar.setToolButtonStyle(Qt.ToolButtonTextUnderIcon) - # configure_action = toolbar.addAction(util.resourceIcon("ide/cog_edit"), "Configure") - # - # plot_action = toolbar.addAction(util.resourceIcon("ide/chart_curve_add"), "Plot") - # save_action.triggered.connect(self.save) - - # reload_action.triggered.connect(self.reload) - - # toolbar.addSeparator() - # - # stretchy_separator = QWidget() - # stretchy_separator.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding) - # toolbar.addWidget(stretchy_separator) - - # + self.setCorner(Qt.TopLeftCorner, Qt.LeftDockWidgetArea) + self.setCorner(Qt.BottomLeftCorner, Qt.BottomDockWidgetArea) + self.setCorner(Qt.TopRightCorner, Qt.RightDockWidgetArea) + self.setCorner(Qt.BottomRightCorner, Qt.BottomDockWidgetArea) + self.__view_menu = None + self.__help_menu = None self.__createMenu() self.__fetchSettings() + def addDock(self, name, widget, area=Qt.RightDockWidgetArea, allowed_areas=Qt.AllDockWidgetAreas): + dock_widget = QDockWidget(name) + dock_widget.setObjectName("%sDock" % name) + dock_widget.setWidget(widget) + dock_widget.setAllowedAreas(allowed_areas) + + self.addDockWidget(area, dock_widget) + + self.__view_menu.addAction(dock_widget.toggleViewAction()) + return dock_widget def addTool(self, tool): tool.setParent(self) self.tools[tool.getName()] = tool - action = self.toolbar.addAction(tool.getIcon(), tool.getName()) - action.setIconText(tool.getName()) - action.setEnabled(tool.isEnabled()) - action.triggered.connect(tool.trigger) + self.toolbar.addAction(tool.getAction()) def __createMenu(self): file_menu = self.menuBar().addMenu("&File") file_menu.addAction("Close", self.__quit) + self.__view_menu = self.menuBar().addMenu("&View") + self.__help_menu = self.menuBar().addMenu("&Help") + """:type: QMenu""" + + """ @rtype: list of QAction """ + advanced_toggle_action = QAction("Show Advanced Options", self) + advanced_toggle_action.setObjectName("AdvancedSimulationOptions") + advanced_toggle_action.setCheckable(True) + advanced_toggle_action.setChecked(False) + advanced_toggle_action.toggled.connect(self.toggleAdvancedMode) + + self.__view_menu.addAction(advanced_toggle_action) + + """ @rtype: list of QAction """ + show_about = self.__help_menu.addAction("About") + show_about.setMenuRole(QAction.ApplicationSpecificRole) + show_about.triggered.connect(self.__showAboutMessage) def __quit(self): @@ -61,7 +80,7 @@ def __quit(self): def __saveSettings(self): - settings = QSettings("Statoil", "ErtGui") + settings = QSettings("Statoil", "Ert-Gui") settings.setValue("geometry", self.saveGeometry()) settings.setValue("windowState", self.saveState()) @@ -74,13 +93,32 @@ def closeEvent(self, event): def __fetchSettings(self): - settings = QSettings("Statoil", "ErtGui") + settings = QSettings("Statoil", "Ert-Gui") self.restoreGeometry(settings.value("geometry").toByteArray()) self.restoreState(settings.value("windowState").toByteArray()) + def toggleAdvancedMode(self, advanced_mode): + if hasattr(self.__main_widget, "toggleAdvancedMode"): + self.__main_widget.toggleAdvancedMode(advanced_mode) + + for tool in self.tools.values(): + if hasattr(tool, "toggleAdvancedMode"): + tool.toggleAdvancedMode(advanced_mode) + def setWidget(self, widget): + self.__main_widget = widget + actions = widget.getActions() + for action in actions: + self.__view_menu.addAction(action) + self.central_layout.addWidget(widget) + def __showAboutMessage(self): + diag = AboutDialog(self) + diag.show() + pass + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/CMakeLists.txt index 55c0727855..0d88c0648f 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/CMakeLists.txt @@ -9,3 +9,4 @@ add_python_package("python.ert_gui.models" ${PYTHON_INSTALL_PREFIX}/ert_gui/mod add_subdirectory(connectors) add_subdirectory(mixins) +add_subdirectory(qt) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/CMakeLists.txt index c8387649cf..3fe0f4118c 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/CMakeLists.txt @@ -1,11 +1,14 @@ set(PYTHON_SOURCES __init__.py ensemble_resizer.py + ert_summary.py ) add_python_package("python.ert_gui.models.connectors" ${PYTHON_INSTALL_PREFIX}/ert_gui/models/connectors "${PYTHON_SOURCES}" True) +add_subdirectory(export) add_subdirectory(init) add_subdirectory(plot) add_subdirectory(queue_system) add_subdirectory(run) +add_subdirectory(load_results) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/__init__.py index 726d46096a..3c2a3cc921 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/__init__.py @@ -1,2 +1,3 @@ +from .ert_summary import ErtSummary from .ensemble_resizer import EnsembleSizeModel diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/ert_summary.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/ert_summary.py new file mode 100644 index 0000000000..91e366dfc4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/ert_summary.py @@ -0,0 +1,58 @@ +from ert.enkf.enums.enkf_obs_impl_type_enum import EnkfObservationImplementationType +from ert.enkf.enums.enkf_var_type_enum import EnkfVarType +from ert_gui.models import ErtConnector + +class ErtSummary(ErtConnector): + + def getForwardModels(self): + """ @rtype: list of str """ + forward_model = self.ert().getModelConfig().getForwardModel() + return [job for job in forward_model.joblist()] + + def getParameters(self): + """ @rtype: list of str """ + parameters = self.ert().ensembleConfig().getKeylistFromVarType(EnkfVarType.PARAMETER) + return sorted([parameter for parameter in parameters], key=lambda k : k.lower()) + + + def getObservations(self): + """ @rtype: list of str """ + gen_obs = self.ert().getObservations().getTypedKeylist(EnkfObservationImplementationType.GEN_OBS) + + + summary_obs = self.ert().getObservations().getTypedKeylist(EnkfObservationImplementationType.SUMMARY_OBS) + + keys = [] + summary_keys_count = {} + summary_keys = [] + for key in summary_obs: + data_key = self.ert().getObservations()[key].getDataKey() + + if not data_key in summary_keys_count: + summary_keys_count[data_key] = 1 + summary_keys.append(data_key) + else: + summary_keys_count[data_key] += 1 + + if key == data_key: + keys.append(key) + else: + keys.append("%s [%s]" % (key, data_key)) + + # keys = [] + # for key in summary_keys: + # count = summary_keys_count[key] + # if count > 1: + # #keys.append("%s (%d)" % (key, count)) + # keys.append("%s" % key) + # else: + # keys.append(key) + + obs_keys = [observation for observation in gen_obs] + summary_keys + return sorted(obs_keys, key=lambda k : k.lower()) + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/CMakeLists.txt new file mode 100644 index 0000000000..fd93079c4a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/CMakeLists.txt @@ -0,0 +1,8 @@ +set(PYTHON_SOURCES + __init__.py + export_keyword_model.py + export_model.py +) + +add_python_package("python.ert_gui.models.connectors.export" ${PYTHON_INSTALL_PREFIX}/ert_gui/models/connectors/export "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/__init__.py new file mode 100644 index 0000000000..8f93319e98 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/__init__.py @@ -0,0 +1,2 @@ +from .export_keyword_model import ExportKeywordModel +from .export_model import ExportModel diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_keyword_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_keyword_model.py new file mode 100644 index 0000000000..9a7f500bb1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_keyword_model.py @@ -0,0 +1,124 @@ +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'export_keyword_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.enkf import EnkfVarType, ErtImplType +from ert_gui.models import ErtConnector + +class ExportKeywordModel(ErtConnector): + + def __init__(self): + super(ExportKeywordModel, self).__init__() + self.__gen_kw = None + self.__field_kw = None + self.__gen_data = None + self.__gen_param = None + + def getKeylistFromImplType(self, ert_impl_type): + return sorted(self.ert().ensembleConfig().getKeylistFromImplType(ert_impl_type)) + + def isDynamicPlot(self, key): + variable_type = self.getVarType(key) + return_value = False + if variable_type == EnkfVarType.DYNAMIC_STATE: + return_value = True + elif variable_type == EnkfVarType.DYNAMIC_RESULT: + return_value = True + + return return_value + + def isDynamicField(self, key): + return self.getVarType(key) == EnkfVarType.DYNAMIC_STATE + + + def getVarType(self, key): + config_node = self.ert().ensembleConfig().getNode(key) + variable_type = config_node.getVariableType() + return variable_type + + def getImplementationType(self, key): + config_node = self.ert().ensembleConfig().getNode(key) + return config_node.getImplementationType() + + def getGenKwKeyWords(self): + if self.__gen_kw is None: + self.__gen_kw = [key for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.GEN_KW)] + + return self.__gen_kw + + def getGenDataKeyWords(self): + if self.__gen_data is None: + gen_data_list = [] + gen_param_list = [] + for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.GEN_DATA): + if self.getVarType(key) == EnkfVarType.PARAMETER: + gen_param_list.append(key) + continue + if self.ert().ensembleConfig().getNode(key).getDataModelConfig().getOutputFormat() is not None: + gen_data_list.append(key) + elif self.ert().ensembleConfig().getNode(key).getDataModelConfig().getInputFormat() is not None: + gen_data_list.append(key) + self.__gen_data = gen_data_list + self.__gen_param = gen_param_list + return self.__gen_data + self.__gen_param + + def getFieldKeyWords(self): + if self.__field_kw is None: + self.__field_kw = self.getKeylistFromImplType(ErtImplType.FIELD) + + return self.__field_kw + + def getKeyWords(self): + return sorted(self.getFieldKeyWords() + self.getGenKwKeyWords() + self.getGenDataKeyWords()) + + def hasKeywords(self): + keys = self.getKeyWords() + if keys.count >0: + return True + else: + return False + + def isGenKw(self, key): + if self.__gen_kw is None: + return False + + return key in self.__gen_kw + + def isFieldKw(self, key): + if self.__field_kw is None: + return False + + return key in self.__field_kw + + def isGenDataKw(self, key): + if self.__gen_data is None: + return False + + return key in self.__gen_data + + def isGenParamKw(self, key): + if self.__gen_param is None: + return False + + return key in self.__gen_param + + def getGenDataReportSteps(self, key): + gen_data_list=[] + obs_keys = self.ert().ensembleConfig().getNode(key).getObservationKeys() + for obs_key in obs_keys: + obs_vector = self.ert().getObservations()[obs_key] + for report_step in obs_vector: + gen_data_list.append(str(report_step)) + + return gen_data_list diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_model.py new file mode 100644 index 0000000000..175a8179c1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/export/export_model.py @@ -0,0 +1,101 @@ +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'export_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.enkf import EnkfConfigNode, GenKw, EnkfNode, NodeId, EnkfFieldFileFormatEnum, ErtImplType, GenData, \ + GenDataFileType +from ert_gui.models import ErtConnector + +class ExportModel(ErtConnector): + + def __init__(self): + super(ExportModel, self).__init__() + + def exportField(self, keyword, path, iactive, file_type, report_step, state, selected_case): + """ + @type keyword: str + @type path: str + @type iactive: BoolVector + @type file_type: EnkfFieldFileFormatEnum + @type report_step: int + @type state: EnkfStateType + @type selected_case: str + """ + file_name = str(path + "/" + keyword + "_%d") + if file_type == EnkfFieldFileFormatEnum.ECL_GRDECL_FILE: + file_name += ".grdecl" + elif file_type == EnkfFieldFileFormatEnum.RMS_ROFF_FILE: + file_name += ".roff" + fs = self.ert().getEnkfFsManager().getFileSystem(selected_case) + return self.ert().exportField(keyword, file_name, iactive, file_type, report_step, state, fs) + + + def exportGenKw(self, keyword, path, iactive, file_type, report_step, state, selected_case): + """ + @type keyword: str + @type path: str + @type iactive: BoolVector + @type file_type: EnkfFieldFileFormatEnum + @type report_step: int + @type state: EnkfStateType + @type selected_case: str + """ + enkf_config_node = self.ert().ensembleConfig().getNode(keyword) + assert isinstance(enkf_config_node, EnkfConfigNode) + node = EnkfNode(enkf_config_node) + fs = self.ert().getEnkfFsManager().getFileSystem(selected_case) + + for index, value in enumerate(iactive): + if value: + if node.tryLoad(fs, NodeId(report_step, index, state)): + gen_kw = GenKw.createCReference(node.valuePointer()) + filename = str(path + "/" + keyword + "_{0}").format(index) + if file_type == "Parameter list": + filename += ".txt" + gen_kw.exportParameters(filename) + else: + filename += ".inc" + gen_kw.exportTemplate(filename) + + def exportGenData(self, keyword, path, iactive, file_type, report_step, state, selected_case): + """ + @type keyword: str + @type path: str + @type iactive: BoolVector + @type file_type: EnkfFieldFileFormatEnum + @type report_step: int + @type state: EnkfStateType + @type selected_case: str + """ + fs = self.ert().getEnkfFsManager().getFileSystem(selected_case) + config_node = self.ert().ensembleConfig().getNode(keyword) + gen_data_config_node = config_node.getDataModelConfig() + + export_type = gen_data_config_node.getOutputFormat() + if export_type == GenDataFileType.GEN_DATA_UNDEFINED: + export_type = gen_data_config_node.getInputFormat() + + node = EnkfNode(config_node) + + for index, active in enumerate(iactive): + if active: + node_id = NodeId(int(report_step), index, state) + + if node.tryLoad(fs, node_id): + gen_data = node.asGenData() + + filename = str(path + "/" + keyword + "_{0}").format(index) + ".txt" + gen_data.export(filename,export_type ,None) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_list.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_list.py index 2251bb4c46..1f6f3fc13c 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_list.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_list.py @@ -7,12 +7,14 @@ class CaseList(ErtConnector, ListModelMixin): def getList(self): - fs = self.ert().getEnkfFsManager().getFileSystem() + fs = self.ert().getEnkfFsManager().getCurrentFileSystem() case_list = self.ert().getEnkfFsManager().getCaseList() return sorted(case_list) def addItem(self, value): - self.ert().getEnkfFsManager().selectFileSystem(value) + # Creates a new filesystem. Value should be a case that does not exist + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(value) + self.ert().getEnkfFsManager().switchFileSystem(enkf_fs) self.observable().notify(ListModelMixin.LIST_CHANGED_EVENT) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_selector.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_selector.py index 1b9e8a2a61..ea86762050 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_selector.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/case_selector.py @@ -21,12 +21,14 @@ def getChoices(self): def getCurrentChoice(self): """ @rtype: str """ case_list = self.getChoices() - current_case = self.ert().getEnkfFsManager().getFileSystem() + current_case = self.ert().getEnkfFsManager().getCurrentFileSystem() return current_case.getCaseName() @may_take_a_long_time def setCurrentChoice(self, case): case = str(case) if not case == "": - self.ert().getEnkfFsManager().userSelectFileSystem(case) - self.observable().notify(self.CURRENT_CHOICE_CHANGED_EVENT) \ No newline at end of file + enkf_fs = self.ert().getEnkfFsManager().getFileSystem(case) + if not enkf_fs is None: + self.ert().getEnkfFsManager().switchFileSystem(enkf_fs) + self.observable().notify(self.CURRENT_CHOICE_CHANGED_EVENT) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/init_from_existing.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/init_from_existing.py index 689e809f98..79ffc89f2d 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/init_from_existing.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/init/init_from_existing.py @@ -25,12 +25,11 @@ def buttonTriggered(self): total_member_count = EnsembleSizeModel().getSpinnerValue() member_mask = BoolVector.createFromList(total_member_count, selected_members) - ranking_key = None selected_parameters = StringList((InitializationParametersModel()).getSelectedItems()) # print("%s %d %d %s %s" % (source_case, source_report_step, int(source_state), str(selected_members), str(selected_parameters))) - self.ert().getEnkfFsManager().initializeFromExistingCase(source_case, source_report_step, source_state, member_mask, ranking_key, selected_parameters) + self.ert().getEnkfFsManager().customInitializeCurrentFromExistingCase(source_case, source_report_step, source_state, member_mask, selected_parameters) self.observable().notify(ButtonModelMixin.BUTTON_TRIGGERED_EVENT) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/CMakeLists.txt new file mode 100644 index 0000000000..46336c77e2 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/CMakeLists.txt @@ -0,0 +1,7 @@ +set(PYTHON_SOURCES + __init__.py + load_results_model.py +) + +add_python_package("python.ert_gui.models.connectors.load_results" ${PYTHON_INSTALL_PREFIX}/ert_gui/models/connectors/load_results "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/__init__.py new file mode 100644 index 0000000000..7cace03c68 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/__init__.py @@ -0,0 +1 @@ +from .load_results_model import LoadResultsModel diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/load_results_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/load_results_model.py new file mode 100644 index 0000000000..009ae9392f --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/load_results/load_results_model.py @@ -0,0 +1,79 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'load_results_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import os +from ert.util import StringList + +from ert_gui.models import ErtConnector + +class LoadResultsModel(ErtConnector): + + def __init__(self): + super(LoadResultsModel, self).__init__() + + def loadResults(self, selected_case, realisations, iteration): + """ + @type selected_case: str + @type realisations: BoolVector + @type iteration: int + """ + fs = self.ert().getEnkfFsManager().getFileSystem(selected_case) + self.ert().loadFromForwardModel(realisations, iteration, fs) + + + def isValidRunPath(self): + """ @rtype: bool """ + run_path = self.ert().getModelConfig().getRunpathAsString() + hasIterations = True + try: + formated = run_path % (0, 0) + return True + except TypeError: + hasIterations = False + + hasRealization = True + try: + formated = run_path % 0 + return True + except TypeError: + hasRealization = False + + return False + + def getCurrentRunPath(self): + """ @rtype: str """ + return self.ert().getModelConfig().getRunpathAsString() + + + def getIterationCount(self): + """ @rtype: int """ + run_path = self.ert().getModelConfig().getRunpathAsString() + formated = None + try: + formated = run_path % (0, 0) + except TypeError: + return 0 + + iteration = 0 + valid_directory = True + while valid_directory: + formated = run_path % (0, iteration) + valid_directory = os.path.exists(formated) + if valid_directory: + iteration += 1 + + return iteration + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/CMakeLists.txt index 2a20844b10..639a34bbc0 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/CMakeLists.txt @@ -1,7 +1,8 @@ set(PYTHON_SOURCES __init__.py data_type_keys_model.py - ensemble_summary_plot.py + report_steps.py + plot_settings.py ) add_python_package("python.ert_gui.models.connectors.plot" ${PYTHON_INSTALL_PREFIX}/ert_gui/models/connectors/plot "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/__init__.py index 519219d71f..d00984295c 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/__init__.py @@ -1,2 +1,3 @@ from .data_type_keys_model import DataTypeKeysModel -from .ensemble_summary_plot import EnsembleSummaryPlot \ No newline at end of file +from .report_steps import ReportStepsModel +from .plot_settings import PlotSettingsModel \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/data_type_keys_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/data_type_keys_model.py index 29cbf24783..95bd1bfb10 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/data_type_keys_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/data_type_keys_model.py @@ -1,4 +1,5 @@ from ert.enkf.enums import ErtImplType, EnkfObservationImplementationType +from ert.enkf.plot import BlockObservationDataFetcher, EnsembleGenKWFetcher, EnsembleGenDataFetcher, ObservationGenDataFetcher, PcaDataFetcher from ert_gui.models import ErtConnector from ert_gui.models.mixins.list_model import ListModelMixin @@ -8,10 +9,37 @@ class DataTypeKeysModel(ErtConnector, ListModelMixin): def __init__(self): self.__keys = None self.__observation_keys = None + self.__block_observation_keys = None self.__summary_keys = None + self.__gen_kw_keys = None + self.__gen_data_keys = None + + self.__custom_pca_keys = {"PCA:All": PcaDataFetcher(self.ert()).getAllObsKeys()} super(DataTypeKeysModel, self).__init__() + def getAllKeys(self): + """ @rtype: list of str """ + keys = self.getAllSummaryKeys() + self.getAllBlockObservationKeys() + self.getAllGenKWKeys() + self.getAllGenDataKeys() + self.getCustomPcaKeys() + # return sorted([key for key in keys], key=lambda k : k.lower()) + return keys + + def getAllGenKWKeys(self): + """ @rtype: list of str """ + if self.__gen_kw_keys is None: + keys = EnsembleGenKWFetcher(self.ert()).getSupportedKeys() + self.__gen_kw_keys = sorted(keys, key=lambda k : k.lower()) + + return self.__gen_kw_keys + + def getAllGenDataKeys(self): + """ @rtype: list of str """ + if self.__gen_data_keys is None: + keys = ObservationGenDataFetcher(self.ert()).getSupportedKeys() + self.__gen_data_keys = sorted(keys, key=lambda k : k.lower()) + + return self.__gen_data_keys + def getAllSummaryKeys(self): """ @rtype: list of str """ if self.__summary_keys is None: @@ -20,25 +48,62 @@ def getAllSummaryKeys(self): return self.__summary_keys + def getAllBlockObservationKeys(self): + """ @rtype: list of str """ + if self.__block_observation_keys is None: + keys = BlockObservationDataFetcher(self.ert()).getSupportedKeys() + self.__block_observation_keys = sorted(keys, key=lambda k : k.lower()) + + return self.__block_observation_keys def getAllObservationSummaryKeys(self): """ @rtype: list of str """ if self.__observation_keys is None: - self.__observation_keys = [key for key in self.getAllSummaryKeys() if self.isObservationKey(key)] - + self.__observation_keys = [key for key in self.getAllSummaryKeys() if self.__isSummaryKeyObservationKey(key)] return self.__observation_keys + def getCustomPcaKeys(self): + """ @rtype: list of str """ + return self.__custom_pca_keys.keys() + def getList(self): """ @rtype: list of str """ - self.__keys = self.__keys or self.getAllSummaryKeys() + self.__keys = self.__keys or self.getAllKeys() return self.__keys def isObservationKey(self, item): """ @rtype: bool """ if self.__observation_keys is None: - return len(self.ert().ensembleConfig().getNode(item).getObservationKeys()) > 0 - else: - return item in self.__observation_keys + self.getAllObservationSummaryKeys() + + if self.__block_observation_keys is None: + self.getAllBlockObservationKeys() + + if self.__gen_data_keys is None: + self.getAllGenDataKeys() + + return item in self.__observation_keys or item in self.__block_observation_keys or item in self.__gen_data_keys + + def __isSummaryKeyObservationKey(self, key): + return len(self.ert().ensembleConfig().getNode(key).getObservationKeys()) > 0 + + def isSummaryKey(self, key): + return key in self.__summary_keys + + def isBlockKey(self, key): + return key in self.__block_observation_keys + + def isGenKWKey(self, key): + return key in self.__gen_kw_keys + + def isGenDataKey(self, key): + return key in self.__gen_data_keys + + def isCustomPcaKey(self, key): + return key in self.__custom_pca_keys + + def getCustomPcaKeyObsKeys(self, key): + return self.__custom_pca_keys[key] diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/ensemble_summary_plot.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/ensemble_summary_plot.py deleted file mode 100644 index ae94a92cd9..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/ensemble_summary_plot.py +++ /dev/null @@ -1,18 +0,0 @@ -from ert.enkf.plot import PlotDataFetcher -from ert_gui.models import ErtConnector -from ert_gui.models.mixins import ModelMixin - - -class EnsembleSummaryPlot(ErtConnector, ModelMixin): - - def getPlotData(self): - return PlotDataFetcher(self.ert()).fetchData() - - def getPlotDataForKey(self, key): - return PlotDataFetcher(self.ert()).fetchDataForKey(key) - - def getPlotDataForKeyAndCases(self, key, cases): - return PlotDataFetcher(self.ert()).fetchDataForKeyAndCases(key, cases) - - - diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/plot_settings.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/plot_settings.py new file mode 100644 index 0000000000..42cd2b291d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/plot_settings.py @@ -0,0 +1,15 @@ +import os +from ert_gui.models import ErtConnector +from ert_gui.models.connectors.init.case_selector import CaseSelectorModel + + +class PlotSettingsModel(ErtConnector): + + def getDefaultPlotPath(self): + """ @rtype: str """ + path = self.ert().plotConfig().getPath() + if not os.path.exists(path): + os.makedirs(path) + return path + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/report_steps.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/report_steps.py new file mode 100644 index 0000000000..7b6450c933 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/plot/report_steps.py @@ -0,0 +1,41 @@ +from ert_gui.models import ErtConnector +from ert_gui.models.connectors.init.case_list import CaseList +from ert_gui.models.mixins import ListModelMixin +from ert.enkf.util import TimeMap + + +class ReportStepsModel(ErtConnector, ListModelMixin): + + def __init__(self): + self.__time_map = None + self.__report_steps = None + super(ReportStepsModel, self).__init__() + + + def getReportSteps(self): + """ @rtype: TimeMap """ + if self.__time_map is None: + case_list = CaseList().getAllCasesWithData() + + for case in case_list: + time_map = self.ert().getEnkfFsManager().getTimeMapForCase(case) + + if len(time_map) > 0: + self.__time_map = time_map + + if self.__time_map is None: + self.__time_map = [] + + return self.__time_map + + + def getList(self): + """ @rtype: list of CTime """ + + time_list = [c_time for c_time in self.getReportSteps()] + if len(time_list) > 0: + time_list = time_list[1:] + return time_list + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/CMakeLists.txt index 22c0c21f75..09eacdc8d2 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/CMakeLists.txt @@ -2,6 +2,7 @@ set(PYTHON_SOURCES __init__.py active_realizations_model.py analysis_module_model.py + analysis_module_variables_model.py base_run_model.py ensemble_experiment.py ensemble_smoother.py @@ -9,6 +10,11 @@ set(PYTHON_SOURCES iterated_ensemble_smoother.py number_of_iterations.py run_path.py + sensitivity_study.py + sensitivity_study_parameters_constant_value_model.py + sensitivity_study_parameters_is_included_model.py + sensitivity_study_parameters_model.py + sensitivity_target_case_format_model.py simulation_mode.py simulations_tracker.py target_case_format_model.py diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/__init__.py index 615fca7cff..e6d9f74808 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/__init__.py @@ -1,5 +1,6 @@ from .target_case_model import TargetCaseModel from .target_case_format_model import TargetCaseFormatModel +from .sensitivity_target_case_format_model import SensitivityTargetCaseFormatModel from .analysis_module_model import AnalysisModuleModel from .iterated_analysis_module_model import IteratedAnalysisModuleModel from .active_realizations_model import ActiveRealizationsModel @@ -9,9 +10,15 @@ from .ensemble_experiment import EnsembleExperiment from .ensemble_smoother import EnsembleSmoother from .iterated_ensemble_smoother import IteratedEnsembleSmoother +from .sensitivity_study import SensitivityStudy from .simulation_mode import SimulationModeModel from .simulations_tracker import SimulationsTracker from .workflows_model import WorkflowsModel from .run_path import RunPathModel + +from .analysis_module_variables_model import AnalysisModuleVariablesModel +from .sensitivity_study_parameters_model import SensitivityStudyParametersModel +from .sensitivity_study_parameters_constant_value_model import SensivityStudyParametersConstantValueModel +from .sensitivity_study_parameters_is_included_model import SensivityStudyParametersIsIncludedModel \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/active_realizations_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/active_realizations_model.py index ec1c875772..2935532672 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/active_realizations_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/active_realizations_model.py @@ -1,4 +1,4 @@ -from ert.util.tvector import BoolVector +from ert.util import BoolVector from ert_gui.models import ErtConnector from ert_gui.models.connectors import EnsembleSizeModel from ert_gui.models.mixins import BasicModelMixin diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/analysis_module_variables_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/analysis_module_variables_model.py new file mode 100644 index 0000000000..e87eb0b099 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/analysis_module_variables_model.py @@ -0,0 +1,90 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'analysis_module_variables_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.analysis.analysis_module import AnalysisModule +from ert_gui.models import ErtConnector + + +class AnalysisModuleVariablesModel(ErtConnector): + + def __init__(self): + super(AnalysisModuleVariablesModel, self).__init__() + self.__variable_names = { + "LAMBDA0": {"type": float, "min": -1, "max": 10000000000000, "step":1.0, "labelname":"Initial Lambda", "pos":0}, + "USE_PRIOR": {"type": bool, "labelname":"Use both Prior and Observation Variability", "pos":1}, + "LAMBDA_REDUCE": {"type": float, "min": 0, "max": 1, "step":0.1, "labelname":"Lambda Reduction Factor", "pos":2}, + "LAMBDA_INCREASE": {"type": float, "min": 1, "max": 10, "step":0.1, "labelname":"Lambda Incremental Factor", "pos":3}, + "LAMBDA_MIN": {"type": float, "min": 0, "max": 10, "step":0.1, "labelname":"Minimum Lambda", "pos":4}, + "LOG_FILE": {"type": str, "labelname":"Log File", "pos":5}, + "CLEAR_LOG": {"type": bool, "labelname":"Clear Existing Log File", "pos":6}, + "LAMBDA_RECALCULATE": {"type": bool, "labelname":"Recalculate Lambda after each Iteration", "pos":7}, + "ENKF_TRUNCATION" :{"type": float, "min": 0, "max": 1, "step":0.1, "labelname":"Singular value truncation", "pos":9}, + "ENKF_NCOMP": {"type": int, "min": -1, "max": 10, "step":1.0, "labelname":"ENKF_NCOMP", "pos":10}, + "CV_NFOLDS": {"type": int, "min": -1, "max": 10, "step":1.0, "labelname":"CV_NFOLDS", "pos":11}, + "FWD_STEP_R2_LIMIT":{"type": float, "min": -1, "max": 100, "step":1.0, "labelname":"FWD_STEP_R2_LIMIT", "pos":12}, + "CV_PEN_PRESS": {"type": bool, "labelname":"CV_PEN_PRESS", "pos":13} + } + + + def getVariableNames(self, analysis_module_name): + """ @rtype: list of str """ + analysis_module = self.ert().analysisConfig().getModule(analysis_module_name) + assert isinstance(analysis_module, AnalysisModule) + items = [] + for name in self.__variable_names: + if analysis_module.hasVar(name): + items.append(name) + return items + + def getVariableType(self, name): + return self.__variable_names[name]["type"] + + def getVariableMaximumValue(self, name): + return self.__variable_names[name]["max"] + + def getVariableMinimumValue(self, name): + return self.__variable_names[name]["min"] + + def getVariableStepValue(self, name): + return self.__variable_names[name]["step"] + + def getVariableLabelName(self, name): + return self.__variable_names[name]["labelname"] + + def getVariablePosition(self, name): + return self.__variable_names[name]["pos"] + + + + def setVariableValue(self, analysis_module_name, name, value): + analysis_module = self.ert().analysisConfig().getModule(analysis_module_name) + result = analysis_module.setVar(name,str(value)) + + + + def getVariableValue(self, analysis_module_name, name): + """ @rtype: int or float or bool or str """ + analysis_module = self.ert().analysisConfig().getModule(analysis_module_name) + variable_type = self.getVariableType(name) + if variable_type == float: + return analysis_module.getDouble(name) + elif variable_type == bool: + return analysis_module.getBool(name) + elif variable_type == str: + return analysis_module.getStr(name) + elif variable_type == int: + return analysis_module.getInt(name) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/ensemble_smoother.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/ensemble_smoother.py index 24704f8675..e7ca641a4e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/ensemble_smoother.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/ensemble_smoother.py @@ -23,10 +23,17 @@ def runSimulations(self): active_realization_mask = ActiveRealizationsModel().getActiveRealizationsMask() - success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, EnkfInitModeEnum.INIT_CONDITIONAL) + success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, EnkfInitModeEnum.INIT_CONDITIONAL , 0) if not success: - raise ErtRunError("Simulation failed!") + min_realization_count = self.ert().analysisConfig().getMinRealisations() + success_count = active_realization_mask.count() + + if min_realization_count > success_count: + raise ErtRunError("Simulation failed! Number of successful realizations less than MIN_REALIZATIONS %d < %d" % (success_count, min_realization_count)) + elif success_count == 0: + raise ErtRunError("Simulation failed! All realizations failed!") + #else ignore and continue self.setPhaseName("Post processing...", indeterminate=True) self.ert().getEnkfSimulationRunner().runPostWorkflow() @@ -34,7 +41,7 @@ def runSimulations(self): self.setPhaseName("Analyzing...", indeterminate=True) target_case_name = TargetCaseModel().getValue() - target_fs = self.ert().getEnkfFsManager().mountAlternativeFileSystem(target_case_name, read_only=False, create=True) + target_fs = self.ert().getEnkfFsManager().getFileSystem(target_case_name) success = self.ert().getEnkfSimulationRunner().smootherUpdate(target_fs) @@ -44,7 +51,7 @@ def runSimulations(self): self.setPhase(1, "Running simulations...", indeterminate=False) self.ert().getEnkfFsManager().switchFileSystem(target_fs) - success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, EnkfInitModeEnum.INIT_NONE) + success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, EnkfInitModeEnum.INIT_NONE, 1) if not success: raise ErtRunError("Simulation failed!") diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/iterated_ensemble_smoother.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/iterated_ensemble_smoother.py index 15a3dfc47a..839cda0bcb 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/iterated_ensemble_smoother.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/iterated_ensemble_smoother.py @@ -1,4 +1,4 @@ -from ert.enkf.enums import EnkfInitModeEnum +from ert.enkf.enums import EnkfInitModeEnum, EnkfStateType from ert_gui.models.connectors.run import NumberOfIterationsModel, ActiveRealizationsModel, IteratedAnalysisModuleModel, BaseRunModel from ert_gui.models.connectors.run.target_case_format_model import TargetCaseFormatModel from ert_gui.models.mixins import ErtRunError @@ -19,14 +19,20 @@ def setAnalysisModule(self): return self.ert().analysisConfig().getModule(module_name) - def runAndPostProcess(self, phase, phase_count, mode): - self.setPhase(phase, "Running iteration %d of %d simulation iterations..." % (phase + 1, phase_count), indeterminate=False) + def runAndPostProcess(self, active_realization_mask, phase, phase_count, mode): + self.setPhase(phase, "Running iteration %d of %d simulation iterations..." % (phase, phase_count - 1), indeterminate=False) - active_realization_mask = ActiveRealizationsModel().getActiveRealizationsMask() - success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, mode) + success = self.ert().getEnkfSimulationRunner().runSimpleStep(active_realization_mask, mode, phase) if not success: - raise ErtRunError("Simulation failed!") + min_realization_count = self.ert().analysisConfig().getMinRealisations() + success_count = active_realization_mask.count() + + if min_realization_count > success_count: + raise ErtRunError("Simulation failed! Number of successful realizations less than MIN_REALIZATIONS %d < %d" % (success_count, min_realization_count)) + elif success_count == 0: + raise ErtRunError("Simulation failed! All realizations failed!") + #ignore and continue self.setPhaseName("Post processing...", indeterminate=True) self.ert().getEnkfSimulationRunner().runPostWorkflow() @@ -34,8 +40,7 @@ def runAndPostProcess(self, phase, phase_count, mode): def createTargetCaseFileSystem(self, phase): target_case_format = TargetCaseFormatModel().getValue() - target_fs = self.ert().getEnkfFsManager().mountAlternativeFileSystem(target_case_format % phase, read_only=False, create=True) - + target_fs = self.ert().getEnkfFsManager().getFileSystem(target_case_format % phase) return target_fs @@ -48,23 +53,55 @@ def analyzeStep(self, target_fs): def runSimulations(self): - iteration_count = NumberOfIterationsModel().getValue() - phase_count = iteration_count + phase_count = NumberOfIterationsModel().getValue() + 1 self.setPhaseCount(phase_count) analysis_module = self.setAnalysisModule() + active_realization_mask = ActiveRealizationsModel().getActiveRealizationsMask() + + source_fs = self.ert().getEnkfFsManager().getCurrentFileSystem() + initial_fs = self.createTargetCaseFileSystem(0) + + if not source_fs == initial_fs: + self.ert().getEnkfFsManager().switchFileSystem(initial_fs) + self.ert().getEnkfFsManager().initializeCurrentCaseFromExisting(source_fs, 0, EnkfStateType.ANALYZED) - analysis_module.setVar("ITER", str(0)) - self.runAndPostProcess(0, phase_count, EnkfInitModeEnum.INIT_CONDITIONAL) + self.runAndPostProcess(active_realization_mask, 0, phase_count, EnkfInitModeEnum.INIT_CONDITIONAL) + target_case_format = TargetCaseFormatModel().getValue() + self.ert().analysisConfig().getAnalysisIterConfig().setCaseFormat( target_case_format ) + + analysis_config = self.ert().analysisConfig() + analysis_iter_config = analysis_config.getAnalysisIterConfig() + num_retries_per_iteration = analysis_iter_config.getNumRetries() + num_tries = 0 + current_iteration = 1 - for phase in range(1, self.phaseCount()): - target_fs = self.createTargetCaseFileSystem(phase) + while current_iteration <= NumberOfIterationsModel().getValue() and num_tries < num_retries_per_iteration: + target_fs = self.createTargetCaseFileSystem(current_iteration) + pre_analysis_iter_num = analysis_module.getInt("ITER") self.analyzeStep(target_fs) + post_analysis_iter_num = analysis_module.getInt("ITER") + + analysis_success = False + if post_analysis_iter_num > pre_analysis_iter_num: + analysis_success = True + + if analysis_success: + self.ert().getEnkfFsManager().switchFileSystem(target_fs) + self.runAndPostProcess(active_realization_mask, current_iteration, phase_count, EnkfInitModeEnum.INIT_NONE) + num_tries = 0 + current_iteration += 1 + else: + self.ert().getEnkfFsManager().initializeCurrentCaseFromExisting(target_fs, 0, EnkfStateType.ANALYZED) + self.runAndPostProcess(active_realization_mask, current_iteration - 1 , phase_count, EnkfInitModeEnum.INIT_NONE) + num_tries += 1 + + - self.ert().getEnkfFsManager().switchFileSystem(target_fs) + if current_iteration == phase_count: + self.setPhase(phase_count, "Simulations completed.") + else: + raise ErtRunError("Iterated Ensemble Smoother stopped: maximum number of iteration retries (%d retries) reached for iteration %d" % (num_retries_per_iteration, current_iteration)) - analysis_module.setVar("ITER", str(phase)) - self.runAndPostProcess(phase, phase_count, EnkfInitModeEnum.INIT_NONE) - self.setPhase(phase_count, "Simulations completed.") diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py new file mode 100644 index 0000000000..c8d1c2fab3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py @@ -0,0 +1,26 @@ +''' +Created on 9. juli 2014 + +@author: perroe +''' + +from ert_gui.models.connectors.run import BaseRunModel # ActiveRealizationsModel, +#from ert_gui.models.mixins.run_model import ErtRunError + +class SensitivityStudy(BaseRunModel): + ''' + A sensitivity study, running experiments varying a parameter at a time. + ''' + + def __init__(self): + super(SensitivityStudy, self).__init__(name = "Sensitivity Study", + phase_count = 1) + + def runSimulations(self): + ''' + Run all the individual simulations + ''' + phase_count = 1 + self.setPhaseCount(phase_count) + + self.setPhase(phase_count, "Simulations not implemented.") diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_constant_value_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_constant_value_model.py new file mode 100644 index 0000000000..b889e24fe6 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_constant_value_model.py @@ -0,0 +1,29 @@ +''' +Created on Aug 26, 2014 + +@author: perroe +''' + +from ert_gui.models import ErtConnector +from ert_gui.models.mixins import BasicModelMixin + +class SensivityStudyParametersConstantValueModel(ErtConnector, BasicModelMixin): + ''' + Model used for setting if a parameter is included in the sensitivity study. + ''' + + def __init__(self, parameter_name, sensitivity_study_parameters_model): + ''' + Constructor + ''' + self.__parameter_name = parameter_name + self.__model = sensitivity_study_parameters_model + + + def getValue(self): + """ @rtype: float """ + return self.__model.getConstantValue(self.__parameter_name) + + + def setValue(self, constant_value): + self.__model.setConstantValue(self.__parameter_name, constant_value) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_is_included_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_is_included_model.py new file mode 100644 index 0000000000..39a372d5f1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_is_included_model.py @@ -0,0 +1,29 @@ +''' +Created on Aug 26, 2014 + +@author: perroe +''' + +from ert_gui.models import ErtConnector +from ert_gui.models.mixins import BooleanModelMixin + +class SensivityStudyParametersIsIncludedModel(ErtConnector, BooleanModelMixin): + ''' + Model used for setting if a parameter is included in the sensitivity study. + ''' + + def __init__(self, parameter_name, sensitivity_study_parameters_model): + ''' + Constructor + ''' + self.__parameter_name = parameter_name + self.__model = sensitivity_study_parameters_model + + + def isTrue(self): + """ @rtype: bool """ + return self.__model.getIsIncluded(self.__parameter_name) + + + def setTrue(self, is_included): + self.__model.setIsIncluded(self.__parameter_name, is_included) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_model.py new file mode 100644 index 0000000000..0f1eb62eea --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study_parameters_model.py @@ -0,0 +1,60 @@ +''' +Created on Aug 22, 2014 + +@author: perroe +''' + +from ert_gui.models import ErtConnector +from ert.enkf.enums.ert_impl_type_enum import ErtImplType +from ert.enkf.plot import EnsembleGenKWFetcher + + +class SensitivityStudyParametersModel(ErtConnector): + + def __init__(self): + super(SensitivityStudyParametersModel, self).__init__() + self.__params = None + self.__is_included = {} + self.__constant_val = {} + self.__parameter_type = {} + + + def setIsIncluded(self, parameter_name, is_included): + self.__is_included[parameter_name] = is_included + + def setConstantValue(self, parameter_name, constant_value): + self.__constant_val[parameter_name] = constant_value + + def getParameters(self): + + if self.__params is None: + self.__params = [] + for key in EnsembleGenKWFetcher(self.ert()).fetchSupportedKeys(): + self.__params.append(key) + self.__is_included[key] = True + self.__constant_val[key] = 0.5 + self.__parameter_type[key] = ErtImplType.GEN_KW + + for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.FIELD): + self.__params.append(key) + self.__is_included[key] = True + self.__constant_val[key] = None + self.__parameter_type[key] = ErtImplType.FIELD + + for key in self.ert().ensembleConfig().getKeylistFromImplType(ErtImplType.GEN_DATA): + self.__params.append(key) + self.__is_included[key] = True + self.__constant_val[key] = None + self.__parameter_type[key] = ErtImplType.GEN_DATA + + return self.__params + + def getIsIncluded(self, parameter_name): + return self.__is_included[parameter_name] + + def getConstantValue(self, parameter_name): + return self.__constant_val[parameter_name] + + def getParameterType(self, parameter_name): + return self.__parameter_type[parameter_name] + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_target_case_format_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_target_case_format_model.py new file mode 100644 index 0000000000..8820ec4fb0 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_target_case_format_model.py @@ -0,0 +1,42 @@ +from ert_gui.models import ErtConnector +from ert_gui.models.connectors.init.case_selector import CaseSelectorModel +from ert_gui.models.mixins import BasicModelMixin + + +class SensitivityTargetCaseFormatModel(ErtConnector, BasicModelMixin): + def __init__(self): + self.__target_case_fmt = self.getDefaultName() + self.__custom = False + CaseSelectorModel().observable().attach(CaseSelectorModel.CURRENT_CHOICE_CHANGED_EVENT, self.__caseChanged) + super(SensitivityTargetCaseFormatModel, self).__init__() + + + def getValue(self): + """ @rtype: str """ + return self.__target_case_fmt + + + def setValue(self, target_case): + if target_case is None or target_case.strip() == "" or target_case == self.getDefaultName(): + self.__custom = False + self.__target_case_fmt = self.getDefaultName() + else: + self.__custom = True + self.__target_case_fmt = target_case + + self.observable().notify(self.VALUE_CHANGED_EVENT) + + + def getDefaultName(self): + """ @rtype: str """ + if self.ert().analysisConfig().getAnalysisIterConfig().caseFormatSet(): + return self.ert().analysisConfig().getAnalysisIterConfig().getCaseFormat() + else: + case_name = CaseSelectorModel().getCurrentChoice() + return "%s_%%s" % case_name + + + def __caseChanged(self): + if not self.__custom: + self.__target_case_fmt = self.getDefaultName() + self.observable().notify(self.VALUE_CHANGED_EVENT) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulation_mode.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulation_mode.py index 508c387672..2eb02fbbda 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulation_mode.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulation_mode.py @@ -1,10 +1,11 @@ from ert_gui.models import ErtConnector -from ert_gui.models.connectors.run import EnsembleExperiment, EnsembleSmoother, IteratedEnsembleSmoother +from ert_gui.models.connectors.run import EnsembleExperiment, EnsembleSmoother, \ + IteratedEnsembleSmoother, SensitivityStudy from ert_gui.models.mixins import ChoiceModelMixin class SimulationModeModel(ErtConnector, ChoiceModelMixin): - __modes = [EnsembleExperiment(), EnsembleSmoother(), IteratedEnsembleSmoother()] + __modes = [EnsembleExperiment(), SensitivityStudy(), EnsembleSmoother(), IteratedEnsembleSmoother()] def __init__(self): self.__value = SimulationModeModel.__modes[0] diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulations_tracker.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulations_tracker.py index 58c21501e4..b2fb28cca5 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulations_tracker.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/simulations_tracker.py @@ -61,12 +61,13 @@ def __init__(self): done_state = SimulationStateStatus("Finished", JobStatusType.JOB_QUEUE_DONE | JobStatusType.JOB_QUEUE_SUCCESS, SimulationStateStatus.COLOR_FINISHED) self.states = [waiting_state, pending_state, running_state, killed_state, failed_state, done_state] + self.custom_states = [waiting_state, pending_state, running_state, failed_state, done_state] self.__checkForUnusedEnums() def getList(self): """ @rtype: list of SimulationStateStatus """ - return list(self.states) + return list(self.custom_states) def __checkForUnusedEnums(self): for enum in JobStatusType.enums(): diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/target_case_format_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/target_case_format_model.py index d7c712b975..da1b966983 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/target_case_format_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/target_case_format_model.py @@ -29,8 +29,11 @@ def setValue(self, target_case): def getDefaultName(self): """ @rtype: str """ - case_name = CaseSelectorModel().getCurrentChoice() - return "%s_%%d" % case_name + if self.ert().analysisConfig().getAnalysisIterConfig().caseFormatSet(): + return self.ert().analysisConfig().getAnalysisIterConfig().getCaseFormat() + else: + case_name = CaseSelectorModel().getCurrentChoice() + return "%s_%%d" % case_name def __caseChanged(self): diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/workflows_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/workflows_model.py index 2661cd0e72..fcb5894c10 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/workflows_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/workflows_model.py @@ -2,6 +2,8 @@ from ert_gui.models.mixins import ChoiceModelMixin from ert_gui.models.mixins.list_model import ListModelMixin +from ert.job_queue import WorkflowRunner, Workflow + class WorkflowsModel(ErtConnector, ListModelMixin, ChoiceModelMixin): @@ -25,18 +27,11 @@ def setCurrentChoice(self, value): self.observable().notify(self.CURRENT_CHOICE_CHANGED_EVENT) - def startWorkflow(self): - # self.ert().getWorkflowList().setVerbose(True) + def createWorkflowRunner(self): + """ @rtype: WorkflowRunner """ workflow_name = self.getCurrentChoice() - return self.ert().getWorkflowList().runWorkflow(workflow_name) - - - def getError(self): - error = self.ert().getWorkflowList().getLastError() - - error_message = "" - - for error_line in error: - error_message += error_line + "\n" + workflow_list = self.ert().getWorkflowList() - return error_message + workflow = workflow_list[workflow_name] + context = workflow_list.getContext() + return WorkflowRunner(workflow, self.ert(), context) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/CMakeLists.txt new file mode 100644 index 0000000000..01b4361654 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/CMakeLists.txt @@ -0,0 +1,8 @@ +set(PYTHON_SOURCES + __init__.py + all_cases_model.py +) + +add_python_package("python.ert_gui.models.qt" ${PYTHON_INSTALL_PREFIX}/ert_gui/models/qt "${PYTHON_SOURCES}" True) + + diff --git a/ThirdParty/Ert/devel/python/test/test-data/local/run/config.txt b/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/__init__.py similarity index 100% rename from ThirdParty/Ert/devel/python/test/test-data/local/run/config.txt rename to ThirdParty/Ert/devel/python/python/ert_gui/models/qt/__init__.py diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/all_cases_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/all_cases_model.py similarity index 89% rename from ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/all_cases_model.py rename to ThirdParty/Ert/devel/python/python/ert_gui/models/qt/all_cases_model.py index ef8a96d0f1..3ee4cbc6a1 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/all_cases_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/qt/all_cases_model.py @@ -49,6 +49,15 @@ def getAllItems(self): return CaseList().getList() + def indexOf(self, item): + items = self.getAllItems() + + if item in items: + + return items.index(item) + + return -1 + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/pages/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/pages/CMakeLists.txt index b5bc769a08..01e3a8d951 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/pages/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/pages/CMakeLists.txt @@ -1,10 +1,9 @@ set(PYTHON_SOURCES __init__.py - configuration_panel.py - message_center.py popup_dialog.py queue_system_configuration.py run_dialog.py + summary_panel.py ) add_python_package("python.ert_gui.pages" ${PYTHON_INSTALL_PREFIX}/ert_gui/pages "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/pages/message_center.py b/ThirdParty/Ert/devel/python/python/ert_gui/pages/message_center.py deleted file mode 100644 index 520b8d734d..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert_gui/pages/message_center.py +++ /dev/null @@ -1,30 +0,0 @@ - -class MessageCenter(object): - __instance = None - - def __new__(cls): - """ @rtype: MessageCenter """ - if cls.__instance is None: - cls.__instance = super(MessageCenter, cls).__new__(cls) - cls.__instance.__help_message_listeners = [] - cls.__instance.__warning_message_listeners = [] - - return cls.__instance - - def addHelpMessageListeners(self, listener): - self.__help_message_listeners.append(listener) - - def addWarningMessageListeners(self, listener): - self.__warning_message_listeners.append(listener) - - def setHelpMessageLink(self, help_link): - for listener in self.__help_message_listeners: - listener.setHelpMessageLink(help_link) - - def setWarning(self, reference, warning): - if warning is None: - warning = "" - - for listener in self.__warning_message_listeners: - listener.setWarning(reference, warning) - diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/pages/summary_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/pages/summary_panel.py new file mode 100644 index 0000000000..be864e6986 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/pages/summary_panel.py @@ -0,0 +1,99 @@ +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QFrame, QLabel, QVBoxLayout, QHBoxLayout, QScrollArea, QWidget, QGridLayout +from ert_gui.models.connectors import ErtSummary + + +class SummaryTemplate(object): + def __init__(self, title): + super(SummaryTemplate, self).__init__() + + self.text = "" + self.__finished = False + self.startGroup(title) + + + def startGroup(self, title): + if not self.__finished: + style = "display: inline-block; width: 150px; vertical-align: top; float: left" + self.text += "
\n" % style + self.addTitle(title) + + def addTitle(self, title): + if not self.__finished: + style = "font-size: 16px; font-weight: bold; font-variant: small-caps;" + self.text += "
%s
" % (style, title) + + def addRow(self, value): + if not self.__finished: + style = "text-indent: 5px;" + self.text += "
%s
" % (style, value) + + def endGroup(self): + if not self.__finished: + self.text += "

\n" + + def getText(self): + if not self.__finished: + self.__finished = True + self.endGroup() + return "%s" % self.text + + +class SummaryPanel(QFrame): + def __init__(self, parent=None): + QFrame.__init__(self, parent) + + self.setMinimumWidth(250) + self.setMinimumHeight(150) + + widget = QWidget() + self.layout = QHBoxLayout() + widget.setLayout(self.layout) + + + scroll = QScrollArea() + scroll.setWidgetResizable(True) + scroll.setWidget(widget) + + layout = QGridLayout() + layout.addWidget(scroll) + + self.setLayout(layout) + self.updateSummary() + + + def updateSummary(self): + summary = ErtSummary() + + text = SummaryTemplate("Forward Model") + + for job in summary.getForwardModels(): + text.addRow(job) + + + self.addColumn(text.getText()) + + text = SummaryTemplate("Parameters") + for parameters in summary.getParameters(): + text.addRow(parameters) + + self.addColumn(text.getText()) + + text = SummaryTemplate("Observations") + for observations in summary.getObservations(): + text.addRow(observations) + + self.addColumn(text.getText()) + + + def addColumn(self, text): + layout = QVBoxLayout() + text_widget = QLabel(text) + text_widget.setWordWrap(True) + text_widget.setTextFormat(Qt.RichText) + layout.addWidget(text_widget) + layout.addStretch(1) + + self.layout.addLayout(layout) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/CMakeLists.txt index 9eeb43b92b..da7aeb85a3 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/CMakeLists.txt @@ -3,8 +3,11 @@ set(PYTHON_SOURCES ensemble_experiment_panel.py ensemble_smoother_panel.py iterated_ensemble_smoother_panel.py + sensitivity_study_panel.py + sensitivity_study_parameters_panel.py simulation_config_panel.py simulation_panel.py + analysis_module_variables_panel.py ) add_python_package("python.ert_gui.simulation" ${PYTHON_INSTALL_PREFIX}/ert_gui/simulation "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/__init__.py index d042a6c525..4e0554b80d 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/__init__.py @@ -1,4 +1,7 @@ +from .analysis_module_variables_panel import AnalysisModuleVariablesPanel from .simulation_config_panel import SimulationConfigPanel from .ensemble_experiment_panel import EnsembleExperimentPanel from .ensemble_smoother_panel import EnsembleSmootherPanel -from .iterated_ensemble_smoother_panel import IteratedEnsembleSmootherPanel \ No newline at end of file +from .iterated_ensemble_smoother_panel import IteratedEnsembleSmootherPanel +from .sensitivity_study_parameters_panel import SensitivityStudyParametersPanel +from .sensitivity_study_panel import SensitivityStudyPanel diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/analysis_module_variables_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/analysis_module_variables_panel.py new file mode 100644 index 0000000000..2498709112 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/analysis_module_variables_panel.py @@ -0,0 +1,140 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'analysis_module_variables_panel.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from functools import partial +from PyQt4.QtCore import QString + +from PyQt4.QtGui import QDoubleSpinBox, QWidget, QFormLayout, QCheckBox, QLineEdit, QHBoxLayout, QSpinBox, QLabel +from ert_gui.models.connectors.run import AnalysisModuleVariablesModel + + + +class AnalysisModuleVariablesPanel(QWidget): + + def __init__(self, analysis_module_name, parent=None): + QWidget.__init__(self, parent) + + self.__analysis_module_name = analysis_module_name + + layout = QFormLayout() + variable_names = AnalysisModuleVariablesModel().getVariableNames(self.__analysis_module_name) + + if len(variable_names) == 0: + label = QString("No variables found to edit") + boxlayout = QHBoxLayout() + layout.addRow(label, boxlayout) + + else: + analysis_module_variables_model = AnalysisModuleVariablesModel() + self.blockSignals(True) + + variable_names2 = self.sortVariables(variable_names) + for variable_name in variable_names2: + variable_type = analysis_module_variables_model.getVariableType(variable_name) + variable_value = analysis_module_variables_model.getVariableValue(self.__analysis_module_name, variable_name) + + label_name = analysis_module_variables_model.getVariableLabelName(variable_name) + if variable_type == bool: + spinner = self.createCheckBox(variable_name, variable_value, variable_type) + + elif variable_type == float: + spinner = self.createDoubleSpinBox(variable_name, variable_value, variable_type, analysis_module_variables_model) + + elif variable_type == str: + spinner = self.createLineEdit(variable_name, variable_value, variable_type) + + elif variable_type == int: + spinner = self.createSpinBox(variable_name, variable_value, variable_type, analysis_module_variables_model) + + layout.addRow(label_name, spinner) + if variable_name == "LAMBDA0": + label = QLabel(" Initial Lambda of -1.00 signifies that the value will be calculated") + layout.addRow(label, None) + + self.setLayout(layout) + self.blockSignals(False) + + def sortVariables(self, variable_list): + analysis_module_variables_model = AnalysisModuleVariablesModel() + sorted_list = ["#","#","#","#","#","#","#","#","#","#","#","#","#","#"] + result = [] + for name in variable_list: + pos = analysis_module_variables_model.getVariablePosition(name) + sorted_list.insert(pos, name) + sorted_list.__delitem__(pos+1) + + for item in sorted_list: + if item <> "#": + result.append(item) + + return result + + + def createSpinBox(self, variable_name, variable_value, variable_type, analysis_module_variables_model): + spinner = QSpinBox() + spinner.setMinimumWidth(75) + spinner.setMaximum(analysis_module_variables_model.getVariableMaximumValue(variable_name)) + spinner.setMinimum(analysis_module_variables_model.getVariableMinimumValue(variable_name)) + spinner.setSingleStep(analysis_module_variables_model.getVariableStepValue(variable_name)) + if variable_value is not None: + spinner.setValue(variable_value) + spinner.valueChanged.connect(partial(self.valueChanged, variable_name, variable_type, spinner)) + return spinner + + def createLineEdit(self, variable_name, variable_value, variable_type): + spinner = QLineEdit() + if variable_value == "None": + spinner.setText("") + else: + spinner.setText(variable_value) + spinner.editingFinished.connect(partial(self.valueChanged, variable_name, variable_type, spinner)) + return spinner + + def createCheckBox(self, variable_name, variable_value, variable_type): + spinner = QCheckBox() + spinner.setChecked(variable_value) + spinner.clicked.connect(partial(self.valueChanged, variable_name, variable_type, spinner)) + return spinner + + def createDoubleSpinBox(self, variable_name, variable_value, variable_type, analysis_module_variables_model): + spinner = QDoubleSpinBox() + spinner.setMinimumWidth(75) + spinner.setMaximum(analysis_module_variables_model.getVariableMaximumValue(variable_name)) + spinner.setMinimum(analysis_module_variables_model.getVariableMinimumValue(variable_name)) + spinner.setSingleStep(analysis_module_variables_model.getVariableStepValue(variable_name)) + spinner.setValue(variable_value) + spinner.valueChanged.connect(partial(self.valueChanged,variable_name, variable_type, spinner)) + return spinner; + + def valueChanged(self, variable_name, variable_type, variable_control): + value = None + if variable_type == bool: + assert isinstance(variable_control, QCheckBox) + value = variable_control.isChecked() + elif variable_type == float: + assert isinstance(variable_control, QDoubleSpinBox) + value = variable_control.value() + elif variable_type == str: + assert isinstance(variable_control, QLineEdit) + value = variable_control.text() + value = str(value).strip() + if len(value) == 0: + value = None + elif variable_type == int: + assert isinstance(variable_control, QSpinBox) + value = variable_control.value() + + if value is not None: + AnalysisModuleVariablesModel().setVariableValue(self.__analysis_module_name, variable_name, value) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_experiment_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_experiment_panel.py index a2be97820b..e96c58a14d 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_experiment_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_experiment_panel.py @@ -39,10 +39,13 @@ def __init__(self): self.setLayout(layout) + def isConfigurationValid(self): return self.active_realizations_field.isValid() - + def toggleAdvancedOptions(self, show_advanced): + self.active_realizations_field.setVisible(show_advanced) + self.layout().labelForField(self.active_realizations_field).setVisible(show_advanced) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_smoother_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_smoother_panel.py index 3b0b46335e..874e743159 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_smoother_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/ensemble_smoother_panel.py @@ -1,10 +1,13 @@ -from PyQt4.QtGui import QFormLayout +from PyQt4.QtCore import Qt, QMargins +from PyQt4.QtGui import QFormLayout, QToolButton, QHBoxLayout from ert_gui.ide.keywords.definitions import RangeStringArgument, ProperNameArgument from ert_gui.models.connectors import EnsembleSizeModel from ert_gui.models.connectors.init import CaseSelectorModel from ert_gui.models.connectors.run import ActiveRealizationsModel, EnsembleSmoother, TargetCaseModel, AnalysisModuleModel, RunPathModel -from ert_gui.simulation import SimulationConfigPanel +from ert_gui.simulation import SimulationConfigPanel, AnalysisModuleVariablesPanel +from ert_gui.widgets import util from ert_gui.widgets.active_label import ActiveLabel +from ert_gui.widgets.closable_dialog import ClosableDialog from ert_gui.widgets.combo_choice import ComboChoice from ert_gui.widgets.string_box import StringBox @@ -23,31 +26,36 @@ def __init__(self): run_path_label = ActiveLabel(run_path_model, "Runpath", "config/simulation/runpath") layout.addRow(run_path_label.getLabel(), run_path_label) - # re_run_path_model = RerunPathModel() - # re_run_path_label = ActiveLabel(re_run_path_model, "Rerunpath", "config/simulation/rerunpath") - # layout.addRow(re_run_path_label.getLabel(), re_run_path_label) - - number_of_realizations_model = EnsembleSizeModel() number_of_realizations_label = ActiveLabel(number_of_realizations_model, "Number of realizations", "config/ensemble/num_realizations") layout.addRow(number_of_realizations_label.getLabel(), number_of_realizations_label) - analysis_module_model = AnalysisModuleModel() - analysis_module_choice = ComboChoice(analysis_module_model, "Analysis Module", "config/analysis/analysis_module") - layout.addRow(analysis_module_choice.getLabel(), analysis_module_choice) - - target_case_model = TargetCaseModel() self.target_case_field = StringBox(target_case_model, "Target case", "config/simulation/target_case") self.target_case_field.setValidator(ProperNameArgument()) layout.addRow(self.target_case_field.getLabel(), self.target_case_field) + analysis_module_model = AnalysisModuleModel() + self.analysis_module_choice = ComboChoice(analysis_module_model, "Analysis Module", "config/analysis/analysis_module") + + self.variables_popup_button = QToolButton() + self.variables_popup_button.setIcon(util.resourceIcon("ide/small/cog_edit.png")) + self.variables_popup_button.clicked.connect(self.showVariablesPopup) + self.variables_popup_button.setMaximumSize(20, 20) + + self.variables_layout = QHBoxLayout() + self.variables_layout.addWidget(self.analysis_module_choice, 0, Qt.AlignLeft) + self.variables_layout.addWidget(self.variables_popup_button, 0, Qt.AlignLeft) + self.variables_layout.setContentsMargins(QMargins(0,0,0,0)) + self.variables_layout.addStretch() + + layout.addRow(self.analysis_module_choice.getLabel(), self.variables_layout) + active_realizations_model = ActiveRealizationsModel() self.active_realizations_field = StringBox(active_realizations_model, "Active realizations", "config/simulation/active_realizations") self.active_realizations_field.setValidator(RangeStringArgument()) layout.addRow(self.active_realizations_field.getLabel(), self.active_realizations_field) - self.target_case_field.validationChanged.connect(self.simulationConfigurationChanged) self.active_realizations_field.validationChanged.connect(self.simulationConfigurationChanged) @@ -56,6 +64,20 @@ def __init__(self): def isConfigurationValid(self): return self.target_case_field.isValid() and self.active_realizations_field.isValid() + def toggleAdvancedOptions(self, show_advanced): + self.active_realizations_field.setVisible(show_advanced) + self.layout().labelForField(self.active_realizations_field).setVisible(show_advanced) + + self.analysis_module_choice.setVisible(show_advanced) + self.layout().labelForField(self.variables_layout).setVisible(show_advanced) + self.variables_popup_button.setVisible(show_advanced) + + def showVariablesPopup(self): + analysis_module_name = AnalysisModuleModel().getCurrentChoice() + if analysis_module_name is not None: + variable_dialog = AnalysisModuleVariablesPanel(analysis_module_name) + dialog = ClosableDialog("Edit variables", variable_dialog, self.parent()) + dialog.exec_() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/iterated_ensemble_smoother_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/iterated_ensemble_smoother_panel.py index b768422362..15c5d53bbb 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/iterated_ensemble_smoother_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/iterated_ensemble_smoother_panel.py @@ -1,10 +1,13 @@ -from PyQt4.QtGui import QFormLayout +from PyQt4.QtCore import Qt, QMargins +from PyQt4.QtGui import QFormLayout, QToolButton, QHBoxLayout from ert_gui.ide.keywords.definitions import RangeStringArgument, ProperNameFormatArgument from ert_gui.models.connectors import EnsembleSizeModel from ert_gui.models.connectors.init import CaseSelectorModel from ert_gui.models.connectors.run import ActiveRealizationsModel, IteratedEnsembleSmoother, IteratedAnalysisModuleModel, NumberOfIterationsModel, TargetCaseFormatModel, RunPathModel -from ert_gui.simulation import SimulationConfigPanel +from ert_gui.simulation import SimulationConfigPanel, AnalysisModuleVariablesPanel +from ert_gui.widgets import util from ert_gui.widgets.active_label import ActiveLabel +from ert_gui.widgets.closable_dialog import ClosableDialog from ert_gui.widgets.combo_choice import ComboChoice from ert_gui.widgets.integer_spinner import IntegerSpinner from ert_gui.widgets.string_box import StringBox @@ -24,32 +27,40 @@ def __init__(self): run_path_label = ActiveLabel(run_path_model, "Runpath", "config/simulation/runpath") layout.addRow(run_path_label.getLabel(), run_path_label) - number_of_realizations_model = EnsembleSizeModel() number_of_realizations_label = ActiveLabel(number_of_realizations_model, "Number of realizations", "config/ensemble/num_realizations") layout.addRow(number_of_realizations_label.getLabel(), number_of_realizations_label) - num_iterations_model = NumberOfIterationsModel() num_iterations_spinner = IntegerSpinner(num_iterations_model, "Number of iterations", "config/simulation/number_of_iterations") layout.addRow(num_iterations_spinner.getLabel(), num_iterations_spinner) - iterated_analysis_module_model = IteratedAnalysisModuleModel() - iterated_analysis_module_choice = ComboChoice(iterated_analysis_module_model, "Analysis Module", "config/analysis/iterated_analysis_module") - layout.addRow(iterated_analysis_module_choice.getLabel(), iterated_analysis_module_choice) - - iterated_target_case_format_model = TargetCaseFormatModel() self.iterated_target_case_format_field = StringBox(iterated_target_case_format_model, "Target case format", "config/simulation/iterated_target_case_format") self.iterated_target_case_format_field.setValidator(ProperNameFormatArgument()) layout.addRow(self.iterated_target_case_format_field.getLabel(), self.iterated_target_case_format_field) + iterated_analysis_module_model = IteratedAnalysisModuleModel() + self.iterated_analysis_module_choice = ComboChoice(iterated_analysis_module_model, "Analysis Module", "config/analysis/iterated_analysis_module") + + self.variables_popup_button = QToolButton() + self.variables_popup_button.setIcon(util.resourceIcon("ide/small/cog_edit.png")) + self.variables_popup_button.clicked.connect(self.showVariablesPopup) + self.variables_popup_button.setMaximumSize(20, 20) + + self.variables_layout = QHBoxLayout() + self.variables_layout.addWidget(self.iterated_analysis_module_choice, 0, Qt.AlignLeft) + self.variables_layout.addWidget(self.variables_popup_button, 0, Qt.AlignLeft) + self.variables_layout.setContentsMargins(QMargins(0,0,0,0)) + self.variables_layout.addStretch() + + layout.addRow(self.iterated_analysis_module_choice.getLabel(), self.variables_layout) + active_realizations_model = ActiveRealizationsModel() self.active_realizations_field = StringBox(active_realizations_model, "Active realizations", "config/simulation/active_realizations") self.active_realizations_field.setValidator(RangeStringArgument()) layout.addRow(self.active_realizations_field.getLabel(), self.active_realizations_field) - self.iterated_target_case_format_field.validationChanged.connect(self.simulationConfigurationChanged) self.active_realizations_field.validationChanged.connect(self.simulationConfigurationChanged) @@ -60,5 +71,19 @@ def isConfigurationValid(self): return self.iterated_target_case_format_field.isValid() and self.active_realizations_field.isValid() and analysis_module is not None + def toggleAdvancedOptions(self, show_advanced): + self.active_realizations_field.setVisible(show_advanced) + self.layout().labelForField(self.active_realizations_field).setVisible(show_advanced) + + self.iterated_analysis_module_choice.setVisible(show_advanced) + self.layout().labelForField(self.variables_layout).setVisible(show_advanced) + self.variables_popup_button.setVisible(show_advanced) + + def showVariablesPopup(self): + analysis_module_name = IteratedAnalysisModuleModel().getCurrentChoice() + if analysis_module_name is not None: + variable_dialog = AnalysisModuleVariablesPanel(analysis_module_name) + dialog = ClosableDialog("Edit variables", variable_dialog, self.parent()) + dialog.exec_() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py new file mode 100644 index 0000000000..4e78b62a12 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py @@ -0,0 +1,89 @@ +''' +Created on 8. juli 2014 + +@author: perroe +''' + +from PyQt4.QtGui import QFormLayout, QToolButton +from ert_gui.ide.keywords.definitions import RangeStringArgument, \ + ProperNameFormatStringArgument +from ert_gui.models.connectors import EnsembleSizeModel +from ert_gui.models.connectors.init import CaseSelectorModel +from ert_gui.models.connectors.run import SensitivityStudy, \ + ActiveRealizationsModel, RunPathModel, SensitivityTargetCaseFormatModel +from ert_gui.simulation import SensitivityStudyParametersPanel +from ert_gui.simulation.simulation_config_panel import SimulationConfigPanel +from ert_gui.widgets import util +from ert_gui.widgets.active_label import ActiveLabel +from ert_gui.widgets.closable_dialog import ClosableDialog +from ert_gui.widgets.combo_choice import ComboChoice +from ert_gui.widgets.string_box import StringBox + + +class SensitivityStudyPanel(SimulationConfigPanel): + ''' + Panel for setting parameters for sensitivity study. + ''' + + + def __init__(self): + ''' + Fills in the input panel for sensitivity study parameters. + ''' + + SimulationConfigPanel.__init__(self, SensitivityStudy()) + + layout = QFormLayout() + + case_model = CaseSelectorModel() + case_selector = ComboChoice(case_model, "Current case", "init/current_case_selection") + layout.addRow(case_selector.getLabel(), case_selector) + + runpath_model = RunPathModel() + runpath_label = ActiveLabel(runpath_model, "Runpath", "config/simulation/runpath") + layout.addRow(runpath_label.getLabel(), runpath_label) + + number_of_realizations_model = EnsembleSizeModel() + number_of_realizations_label = ActiveLabel(number_of_realizations_model, "Number of realizations", "config/ensemble/num_realizations") + layout.addRow(number_of_realizations_label.getLabel(), number_of_realizations_label) + + sensitivity_target_case_format_model = SensitivityTargetCaseFormatModel() + self.iterated_target_case_format_field = StringBox(sensitivity_target_case_format_model, "Target case format", + "config/simulation/sensitivity_target_case_format") + self.iterated_target_case_format_field.setValidator(ProperNameFormatStringArgument()) + layout.addRow(self.iterated_target_case_format_field.getLabel(), self.iterated_target_case_format_field) + + self.parameters_popup_button = QToolButton() + self.parameters_popup_button.setIcon(util.resourceIcon("ide/small/cog_edit.png")) + self.parameters_popup_button.clicked.connect(self.showParametersPopup) + self.parameters_popup_button.setMaximumSize(20, 20) + + layout.addRow("Parameters:", self.parameters_popup_button) + + active_realizations_model = ActiveRealizationsModel() + self.active_realizations_field = StringBox(active_realizations_model, "Active realizations", "config/simulation/active_realizations") + self.active_realizations_field.setValidator(RangeStringArgument(number_of_realizations_model.getValue())) + layout.addRow(self.active_realizations_field.getLabel(), self.active_realizations_field) + + self.active_realizations_field.validationChanged.connect(self.simulationConfigurationChanged) + + self.setLayout(layout) + + def isConfigurationValid(self): + ''' + Check if the given input configuration is valid, and that all needed + data is given. + ''' + + return self.active_realizations_field.isValid() + + def showParametersPopup(self): + parameter_panel = SensitivityStudyParametersPanel() + dialog = ClosableDialog("Edit variables", parameter_panel, self.parent()) + + dialog.exec_() + + + def toggleAdvancedOptions(self, show_advanced): + self.active_realizations_field.setVisible(show_advanced) + self.layout().labelForField(self.active_realizations_field).setVisible(show_advanced) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_parameters_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_parameters_panel.py new file mode 100644 index 0000000000..18943dce5f --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_parameters_panel.py @@ -0,0 +1,94 @@ +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'analysis_module_variables_panel.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from collections import namedtuple + +from PyQt4.QtCore import Qt, QSize +from PyQt4.QtGui import QTableWidget, QHeaderView, QLabel, QTableWidgetItem + +from ert_gui.ide.keywords.definitions import FloatArgument +from ert_gui.models.connectors.run import SensitivityStudyParametersModel, \ + SensivityStudyParametersConstantValueModel, SensivityStudyParametersIsIncludedModel +from ert_gui.widgets.checkbox import CheckBox +from ert_gui.widgets.string_box import StringBox +from ert.enkf.enums.ert_impl_type_enum import ErtImplType + + +class SensitivityStudyParametersPanel(QTableWidget): + + Column = namedtuple("Column_tuple", "index header") + + columns = {"name" : Column(index = 0, header = "Parameter Name"), + "is_active" : Column(index = 1, header = "Include"), + "const_value" : Column(index = 2, header = "Constant Value")} + + column_list = ["name", "is_active", "const_value"] + + def __init__(self, parent=None): + model = SensitivityStudyParametersModel() + parameters = model.getParameters() + n_parameters = len(parameters) + + super(QTableWidget, self).__init__(n_parameters, len(self.columns), parent) + self.verticalHeader().setResizeMode(QHeaderView.Fixed) + self.verticalHeader().hide() + + headers = [self.columns[col_id].header for col_id in self.column_list] + self.setHorizontalHeaderLabels(headers) + + for row in range(n_parameters): + param_name = parameters[row] + + param_name_widget = QLabel(param_name) + param_name_widget.setMargin(5) + self.setCellWidget(row, self.columns["name"].index, param_name_widget) + + if (model.getParameterType(param_name) == ErtImplType.GEN_KW): + const_value_model = SensivityStudyParametersConstantValueModel(param_name, model) + const_value_widget = StringBox(const_value_model, "Constant value", + "config/simulation/sensitivity_parameter_constant_value") + const_value_widget.setValidator(FloatArgument()) + const_value_widget.setAlignment(Qt.AlignRight) + self.setCellWidget(row, self.columns["const_value"].index, const_value_widget) + else: + empty_item = QTableWidgetItem() + empty_item.setFlags(empty_item.flags() ^ Qt.ItemIsEditable) + self.setItem(row, self.columns["const_value"].index, empty_item) + + + is_active_model = SensivityStudyParametersIsIncludedModel(param_name, model) + is_active_widget = CheckBox(is_active_model, "Is included", + "config/simulation/sensitivity_parameter_is_included", show_label=False) + self.setCellWidget(row, self.columns["is_active"].index, is_active_widget) + + + self.resizeColumnsToContents() + self.setMinimumWidth(self.sizeHint().width()) + + self.blockSignals(False) + + def sizeHint(self): + height = QTableWidget.sizeHint(self).height() + + width = self.horizontalHeader().length() + + margins = self.contentsMargins() + width += margins.left() + margins.right() + + width += self.verticalScrollBar().sizeHint().width() + + return QSize(width, height) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_config_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_config_panel.py index e2d49f4781..50311b88cd 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_config_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_config_panel.py @@ -9,15 +9,13 @@ class SimulationConfigPanel(QWidget): def __init__(self, simulation_model): QWidget.__init__(self) self.setContentsMargins(10, 10, 10, 10) - self.__simulation_model = simulation_model - def getSimulationModel(self): return self.__simulation_model def isConfigurationValid(self): return True - - + def toggleAdvancedOptions(self, show_advanced): + raise NotImplementedError() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_panel.py index d670f87cc8..e9774d4fb4 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/simulation_panel.py @@ -1,16 +1,20 @@ from PyQt4.QtCore import Qt, QSize -from PyQt4.QtGui import QWidget, QVBoxLayout, QHBoxLayout, QLabel, QStackedWidget, QFrame, QToolButton -from ert_gui.models.connectors.init import CaseList +from PyQt4.QtGui import QWidget, QVBoxLayout, QHBoxLayout, QLabel, QStackedWidget, QFrame, QToolButton, \ + QMessageBox +from ert_gui.models.connectors.init import CaseList, CaseSelectorModel from ert_gui.models.connectors.run import SimulationModeModel from ert_gui.pages.run_dialog import RunDialog -from ert_gui.simulation import EnsembleExperimentPanel, EnsembleSmootherPanel, IteratedEnsembleSmootherPanel +from ert_gui.simulation import EnsembleExperimentPanel, EnsembleSmootherPanel, \ + IteratedEnsembleSmootherPanel, SensitivityStudyPanel from ert_gui.simulation.simulation_config_panel import SimulationConfigPanel from ert_gui.widgets import util from ert_gui.widgets.combo_choice import ComboChoice +from ert_gui.widgets.helped_widget import HelpedWidget class SimulationPanel(QWidget): + def __init__(self): QWidget.__init__(self) @@ -33,6 +37,7 @@ def __init__(self): self.run_button.setIcon(util.resourceIcon("ide/gear_in_play")) self.run_button.clicked.connect(self.runSimulation) self.run_button.setToolButtonStyle(Qt.ToolButtonTextBesideIcon) + HelpedWidget.addHelpToWidget(self.run_button, "run/start_simulation") simulation_mode_layout.addWidget(self.run_button) simulation_mode_layout.addStretch(1) @@ -50,31 +55,49 @@ def __init__(self): self.simulation_widgets = {} self.addSimulationConfigPanel(EnsembleExperimentPanel()) + self.addSimulationConfigPanel(SensitivityStudyPanel()) self.addSimulationConfigPanel(EnsembleSmootherPanel()) self.addSimulationConfigPanel(IteratedEnsembleSmootherPanel()) self.setLayout(layout) + def addSimulationConfigPanel(self, panel): assert isinstance(panel, SimulationConfigPanel) + panel.toggleAdvancedOptions(False) self.simulation_stack.addWidget(panel) self.simulation_widgets[panel.getSimulationModel()] = panel panel.simulationConfigurationChanged.connect(self.validationStatusChanged) + def getActions(self): + return [] + + + def toggleAdvancedMode(self, show_advanced): + for panel in self.simulation_widgets.values(): + panel.toggleAdvancedOptions(show_advanced) + + def getCurrentSimulationMode(self): return SimulationModeModel().getCurrentChoice() + def runSimulation(self): - run_model = self.getCurrentSimulationMode() + case_name = CaseSelectorModel().getCurrentChoice() + message = "Are you sure you want to use case '%s' for running of simulations?" % case_name + start_simulations = QMessageBox.question(self, "Start simulations?", message, QMessageBox.Yes | QMessageBox.No ) - dialog = RunDialog(run_model) - dialog.startSimulation() - dialog.exec_() + if start_simulations == QMessageBox.Yes: + run_model = self.getCurrentSimulationMode() - CaseList().externalModificationNotification() # simulations may have added new cases. + dialog = RunDialog(run_model) + dialog.startSimulation() + dialog.exec_() + + CaseList().externalModificationNotification() # simulations may have added new cases. def toggleSimulationMode(self): @@ -82,6 +105,7 @@ def toggleSimulationMode(self): self.simulation_stack.setCurrentWidget(widget) self.validationStatusChanged() + def validationStatusChanged(self): widget = self.simulation_widgets[self.getCurrentSimulationMode()] self.run_button.setEnabled(widget.isConfigurationValid()) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/site_config.py.in b/ThirdParty/Ert/devel/python/python/ert_gui/site_config.py.in new file mode 100644 index 0000000000..34da72fb97 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/site_config.py.in @@ -0,0 +1 @@ +config_file = "${SITE_CONFIG_FILE}" diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/CMakeLists.txt index 3b7f4729cc..ecab75219d 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/CMakeLists.txt @@ -1,12 +1,15 @@ set(PYTHON_SOURCES __init__.py + help_center.py tool.py ) add_python_package("python.ert_gui.tools" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools "${PYTHON_SOURCES}" True) add_subdirectory(export) +add_subdirectory(help) add_subdirectory(ide) add_subdirectory(manage_cases) add_subdirectory(plot) add_subdirectory(workflows) +add_subdirectory(load_results) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/__init__.py index f3f99636d7..17af514901 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/__init__.py @@ -1 +1,2 @@ +from .help_center import HelpCenter from .tool import Tool \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/CMakeLists.txt index 118d8d135f..1e5b3d77f4 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/CMakeLists.txt @@ -1,6 +1,9 @@ set(PYTHON_SOURCES __init__.py + export_panel.py export_tool.py + exporter.py + export_realizations_model.py ) add_python_package("python.ert_gui.tools.export" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools/export "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/__init__.py index ce0bde0a96..aea0ef1b9e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/__init__.py @@ -1 +1,4 @@ -from .export_tool import ExportTool \ No newline at end of file +from .export_realizations_model import ExportRealizationsModel +from .export_panel import ExportPanel +from .exporter import Exporter +from .export_tool import ExportTool diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_panel.py new file mode 100644 index 0000000000..2511d1d973 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_panel.py @@ -0,0 +1,186 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'export_panel.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from PyQt4.QtCore import QDir, pyqtSignal +from PyQt4.QtGui import QFormLayout, QWidget, QLineEdit, QToolButton, QHBoxLayout, QFileDialog, QComboBox +from ert.enkf import EnkfStateType +from ert_gui.ide.keywords.definitions import RangeStringArgument +from ert_gui.models.connectors import EnsembleSizeModel +from ert_gui.models.connectors.export import ExportKeywordModel +from ert_gui.models.connectors.init import CaseSelectorModel +from ert_gui.tools.export import ExportRealizationsModel +from ert_gui.models.qt.all_cases_model import AllCasesModel +from ert_gui.widgets.string_box import StringBox + + +class ExportPanel(QWidget): + + updateExportButton = pyqtSignal(str, bool) + runExport = pyqtSignal(dict) + + def __init__(self, parent=None): + QWidget.__init__(self, parent) + self.setMinimumWidth(500) + self.setMinimumHeight(200) + self.__dynamic = False + + self.setWindowTitle("Export data") + self.activateWindow() + + layout = QFormLayout() + current_case = CaseSelectorModel().getCurrentChoice() + + self.__case_model = AllCasesModel() + self.__case_combo = QComboBox() + self.__case_combo.setSizeAdjustPolicy(QComboBox.AdjustToMinimumContentsLength) + self.__case_combo.setMinimumContentsLength(20) + self.__case_combo.setModel(self.__case_model) + self.__case_combo.setCurrentIndex(self.__case_model.indexOf(current_case)) + layout.addRow("Select case:",self.__case_combo) + + self.__export_keyword_model = ExportKeywordModel() + + self.__kw_model = self.__export_keyword_model.getKeyWords() + self.__keywords = QComboBox() + self.__keywords.addItems(self.__kw_model) + layout.addRow("Select keyword:",self.__keywords) + + self.__active_realizations_model = ExportRealizationsModel(EnsembleSizeModel().getValue()) + self.__active_realizations_field = StringBox(self.__active_realizations_model, "Active realizations", "config/simulation/active_realizations") + self.__active_realizations_field.setValidator(RangeStringArgument()) + self.__active_realizations_field.validationChanged.connect(self.validateExportDialog) + layout.addRow(self.__active_realizations_field.getLabel(), self.__active_realizations_field) + + file_name_button= QToolButton() + file_name_button.setText("Browse") + file_name_button.clicked.connect(self.selectFileDirectory) + + self.__defaultPath = QDir.currentPath()+"/export" + self.__file_name = QLineEdit() + self.__file_name.setEnabled(False) + self.__file_name.setText(self.__defaultPath) + self.__file_name.textChanged.connect(self.validateExportDialog) + self.__file_name.setMinimumWidth(250) + + file_name_layout = QHBoxLayout() + file_name_layout.addWidget(self.__file_name) + file_name_layout.addWidget(file_name_button) + layout.addRow("Select directory to save files to:", file_name_layout) + + self.__gen_kw_file_types = ["Parameter list", "Template based"] + self.__field_kw_file_types = ["Eclipse GRDECL", "RMS roff"] + self.__gen_data_file_types = ["Gen data"] + + self.__file_type_model = self.__field_kw_file_types + self.__file_type_combo = QComboBox() + self.__file_type_combo.setSizeAdjustPolicy(QComboBox.AdjustToContents) + self.__file_type_combo.addItems(self.__file_type_model) + layout.addRow("Select file format:",self.__file_type_combo) + + self.__report_step = QLineEdit() + layout.addRow("Report step:", self.__report_step) + + self.__gen_data_report_step_model=[] + self.__gen_data_report_step = QComboBox() + layout.addRow("Report step:", self.__gen_data_report_step) + + self.setLayout(layout) + self.__keywords.currentIndexChanged.connect(self.keywordSelected) + self.keywordSelected() + + def selectFileDirectory(self): + directory = QFileDialog().getExistingDirectory(self, "Directory", self.__file_name.text(), QFileDialog.ShowDirsOnly) + if str(directory).__len__() > 0: + self.__file_name.setText(str(directory)) + + def updateFileExportType(self, keyword): + self.__file_type_combo.clear() + if self.__export_keyword_model.isGenKw(keyword): + self.__file_type_model = self.__gen_kw_file_types + elif self.__export_keyword_model.isGenParamKw(keyword): + self.__file_type_model = self.__gen_data_file_types + elif self.__export_keyword_model.isGenDataKw(keyword): + self.__file_type_model = self.__gen_data_file_types + else: + self.__file_type_model = self.__field_kw_file_types + + self.__file_type_combo.addItems(self.__file_type_model) + + def export(self): + keyword = self.__kw_model[self.__keywords.currentIndex()] + report_step = self.getReportStep(keyword) + all_cases = self.__case_model.getAllItems() + selected_case = all_cases[self.__case_combo.currentIndex()] + path = self.__file_name.text() + iactive = self.__active_realizations_model.getActiveRealizationsMask() + file_type_key = self.__file_type_model[self.__file_type_combo.currentIndex()] + state = self.getEnkfStateType(keyword) + values = {"keyword":keyword, "report_step":report_step, "iactive":iactive,"file_type_key":file_type_key, "state":state, "selected_case":selected_case, "path":path} + self.runExport.emit(values) + + def getEnkfStateType(self, key): + if self.__export_keyword_model.isGenParamKw(key): + return EnkfStateType.ANALYZED + else: + return EnkfStateType.FORECAST + + def getReportStep(self, key): + report_step = 0 + if self.__dynamic: + report_step = self.__report_step.text() + + if self.__export_keyword_model.isGenParamKw(key): + return report_step + + if self.__export_keyword_model.isGenDataKw(key): + report_step = self.__gen_data_report_step_model[self.__gen_data_report_step.currentIndex()] + + return report_step + + + def keywordSelected(self): + key = self.__kw_model[self.__keywords.currentIndex()] + self.updateFileExportType(key) + self.__dynamic = False + if self.__export_keyword_model.isFieldKw(key): + self.__dynamic = self.__export_keyword_model.isDynamicField(key) + + self.__report_step.setVisible(self.__dynamic) + self.layout().labelForField(self.__report_step).setVisible(self.__dynamic) + + self.__gen_data_report_step.setVisible(self.__export_keyword_model.isGenDataKw(key)) + self.layout().labelForField(self.__gen_data_report_step).setVisible(self.__export_keyword_model.isGenDataKw(key)) + + if self.__export_keyword_model.isGenDataKw(key): + data = self.__export_keyword_model.getGenDataReportSteps(key) + self.__gen_data_report_step_model = data + self.__gen_data_report_step.clear() + self.__gen_data_report_step.addItems(self.__gen_data_report_step_model) + + def setSelectedCase(self, selected_case): + self.__case_combo.setCurrentIndex(self.__case_model.indexOf(selected_case)) + + def validateExportDialog(self): + validRealizations = False + if self.__active_realizations_field.isValid(): + validRealizations = True + + path = str(self.__file_name.text()) + validPath = len(path) > 0 + + if validRealizations and validPath: + self.updateExportButton.emit("export", True) + else: + self.updateExportButton.emit("export", False) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_realizations_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_realizations_model.py new file mode 100644 index 0000000000..78b2bcd58d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_realizations_model.py @@ -0,0 +1,68 @@ +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'export_realizations_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.util import BoolVector +from ert_gui.models.mixins import BasicModelMixin + + +class ExportRealizationsModel(BasicModelMixin): + + + def __init__(self, realization_count): + self.__realization_count = realization_count + self.__active_realizations = self.getDefaultValue() + self.__custom = False + super(ExportRealizationsModel, self).__init__() + + + def getValue(self): + """ @rtype: str """ + return self.__active_realizations + + def setValue(self, active_realizations): + if active_realizations is None or active_realizations.strip() == "" or active_realizations == self.getDefaultValue(): + self.__custom = False + self.__active_realizations = self.getDefaultValue() + else: + self.__custom = True + self.__active_realizations = active_realizations + + + def getDefaultValue(self): + return "0-%d" % (self.__realization_count - 1) + + def getActiveRealizationsMask(self): + mask = BoolVector.active_mask(self.getValue()) + + if mask is None: + raise ValueError("Error while parsing range string!") + + if len(mask) > self.__realization_count: + raise ValueError("Mask size changed %d != %d!" % (self.__realization_count, len(mask))) + + return mask + + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_tool.py index 619a370847..195ee82aa5 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/export_tool.py @@ -1,11 +1,50 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'export_tool.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from weakref import ref +from ert_gui.models.connectors.export import ExportKeywordModel +from ert_gui.models.connectors.init import CaseSelectorModel + from ert_gui.tools import Tool +from ert_gui.tools.export import ExportPanel, Exporter from ert_gui.widgets import util +from ert_gui.widgets.closable_dialog import ClosableDialog class ExportTool(Tool): def __init__(self): - super(ExportTool, self).__init__("Export", util.resourceIcon("ide/table_export"), enabled=False) + super(ExportTool, self).__init__("Export Data", "tools/export", util.resourceIcon("ide/table_export")) + self.__export_widget = None + self.__dialog = None + self.__exporter = None + self.setEnabled(ExportKeywordModel().hasKeywords()) + def trigger(self): - pass + if self.__export_widget is None: + self.__export_widget = ref(ExportPanel(self.parent())) + self.__exporter = Exporter() + self.__export_widget().runExport.connect(self.__exporter.runExport) + + + self.__export_widget().setSelectedCase(CaseSelectorModel().getCurrentChoice()) + self.__dialog = ref(ClosableDialog("Export", self.__export_widget(), self.parent())) + self.__export_widget().updateExportButton.connect(self.__dialog().toggleButton) + self.__dialog().addButton("Export", self.export) + self.__dialog().show() + def export(self): + self.__export_widget().export() + self.__dialog().accept() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/exporter.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/exporter.py new file mode 100644 index 0000000000..8de4cc5699 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/export/exporter.py @@ -0,0 +1,77 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'export_tool.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import os +from PyQt4.QtCore import QDir +from PyQt4.QtGui import QMessageBox +from ert.enkf import EnkfFieldFileFormatEnum +from ert_gui.models.connectors.export import ExportModel, ExportKeywordModel + + +class Exporter(): + + def __init__(self): + self.__export_keyword_model = ExportKeywordModel() + + def runExport(self, values): + keyword = values["keyword"] + file_name = self.createExportFileNameMask(keyword, values["selected_case"], values["report_step"], values["path"]) + + if self.__export_keyword_model.isFieldKw(keyword): + self.exportField(keyword, file_name, values["iactive"], values["file_type_key"], values["report_step"], values["state"], values["selected_case"]) + elif self.__export_keyword_model.isGenKw(keyword): + self.exportGenKw(keyword, file_name, values["iactive"], values["file_type_key"], values["report_step"], values["state"], values["selected_case"]) + elif self.__export_keyword_model.isGenParamKw(keyword): + self.exportGenData(keyword, file_name, values["iactive"], values["file_type_key"], values["report_step"], values["state"], values["selected_case"]) + elif self.__export_keyword_model.isGenDataKw(keyword): + self.exportGenData(keyword, file_name, values["iactive"], values["file_type_key"], values["report_step"], values["state"], values["selected_case"]) + + def exportField(self, keyword, file_name, iactive, file_type_key, report_step, state, selected_case): + if file_type_key == "Eclipse GRDECL": + file_type = EnkfFieldFileFormatEnum.ECL_GRDECL_FILE + else: + file_type = EnkfFieldFileFormatEnum.RMS_ROFF_FILE + + result = ExportModel().exportField(keyword, file_name, iactive, file_type, report_step, state, selected_case) + if not result: + QMessageBox.warning(self, "Warning",'''Something did not work!''',QMessageBox.Ok); + + def exportGenData(self, keyword, file_name, iactive, file_type_key, report_step, state, selected_case): + ExportModel().exportGenData(keyword, file_name, iactive, file_type_key, report_step, state, selected_case) + + def exportGenKw(self, keyword, file_name, iactive, file_type_key, report_step, state, selected_case): + ExportModel().exportGenKw(keyword, file_name, iactive, file_type_key, report_step, state, selected_case) + + def createExportFileNameMask(self, keyword, current_case, report_step, path): + impl_type = None + + if self.__export_keyword_model.isFieldKw(keyword): + impl_type = self.__export_keyword_model.getImplementationType(keyword) + elif self.__export_keyword_model.isGenDataKw(keyword): + impl_type = "Gen_Data" + elif self.__export_keyword_model.isGenKw(keyword): + impl_type = "Gen_Kw" + elif self.__export_keyword_model.isGenParamKw(keyword): + impl_type = "Gen_Param" + + path = os.path.join(str(path), str(current_case), str(impl_type), str(keyword)) + + if self.__export_keyword_model.isGenDataKw(keyword): + path = path + "_" + str(report_step) + + if not QDir(path).exists(): + os.makedirs(path) + + return path \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/CMakeLists.txt new file mode 100644 index 0000000000..d8698f25ce --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/CMakeLists.txt @@ -0,0 +1,8 @@ +set(PYTHON_SOURCES + __init__.py + help_tool.py + help_window.py +) + +add_python_package("python.ert_gui.tools.help" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools/help "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/__init__.py new file mode 100644 index 0000000000..bf58faee13 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/__init__.py @@ -0,0 +1,2 @@ +from .help_window import HelpWindow +from .help_tool import HelpTool diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_tool.py new file mode 100644 index 0000000000..40e4a95149 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_tool.py @@ -0,0 +1,26 @@ +from ert_gui.tools import Tool +from ert_gui.tools.help import HelpWindow +from ert_gui.widgets import util + + +class HelpTool(Tool): + __help_window_instance = None + + def __init__(self, help_center_name, parent): + super(HelpTool, self).__init__("Help", "tools/help", util.resourceIcon("ide/help"), enabled=True, checkable=True) + self.setParent(parent) + + self.help_center_name = help_center_name + + if HelpTool.__help_window_instance is None: + HelpTool.__help_window_instance = HelpWindow(self.help_center_name, parent=self.parent()) + self.__help_window_instance.visibilityChanged.connect(self.getAction().setChecked) + + + def trigger(self): + checked = self.getAction().isChecked() + if checked: + HelpTool.__help_window_instance.show() + else: + HelpTool.__help_window_instance.hide() + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_window.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_window.py new file mode 100644 index 0000000000..3d4b27cdcf --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help/help_window.py @@ -0,0 +1,86 @@ +from PyQt4.QtCore import Qt, QUrl, pyqtSignal, QSettings +from PyQt4.QtGui import QLabel, QVBoxLayout, QColor, QDesktopServices, QDialog, QMainWindow, QWidget + +from ert_gui.tools import HelpCenter + + +class HelpWindow(QMainWindow): + help_prefix = None + default_help_string = "No help available!" + validation_template = ("" + "" + "" + "" + "
Notice:
%s
" + "") + + visibilityChanged = pyqtSignal(bool) + + def __init__(self, help_center_name, parent=None): + QMainWindow.__init__(self, parent, Qt.WindowStaysOnTopHint) + palette = self.palette() + palette.setColor(self.backgroundRole(), QColor(255, 255, 224)) + self.setPalette(palette) + self.setAutoFillBackground(True) + self.setMinimumWidth(300) + self.setMinimumHeight(250) + self.setWindowTitle("Help") + self.setObjectName("ert-gui-help") + + central_widget = QWidget() + + layout = QVBoxLayout() + central_widget.setLayout(layout) + + self.link_widget = QLabel() + self.link_widget.setStyleSheet("font-weight: bold") + self.link_widget.setMinimumHeight(20) + + self.help_widget = QLabel(HelpWindow.default_help_string) + self.help_widget.setWordWrap(True) + self.help_widget.setTextFormat(Qt.RichText) + self.help_widget.linkActivated.connect(self.openHelpURL) + + layout.addWidget(self.link_widget) + layout.addWidget(self.help_widget) + layout.addStretch(1) + + HelpCenter.getHelpCenter(help_center_name).addListener(self) + + self.__position = None + self.__geometry = None + self.setCentralWidget(central_widget) + + # settings = QSettings("Statoil", "Ert-Gui") + # self.restoreGeometry(settings.value("ert-gui-help/geometry").toByteArray()) + + + def openHelpURL(self, q_string): + url = QUrl(q_string) + QDesktopServices.openUrl(url) + + + def setHelpMessage(self, help_link, message): + self.link_widget.setText(help_link) + self.help_widget.setText(message) + + def showEvent(self, q_show_event): + if self.__geometry is not None and self.__position is not None: + self.setGeometry(self.__geometry) + self.move(self.__position) + self.visibilityChanged.emit(True) + + def hideEvent(self, q_hide_event): + self.__position = self.pos() + self.__geometry = self.geometry() + self.visibilityChanged.emit(False) + + + def keyPressEvent(self, event): + if event.key() != Qt.Key_Escape: + QMainWindow.keyPressEvent(self, event) + + def closeEvent(self, event): + self.hide() + event.ignore() + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/help_center.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help_center.py new file mode 100644 index 0000000000..0be497a559 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/help_center.py @@ -0,0 +1,107 @@ +import os + + +class HelpCenter(object): + __default_help_string = "No help available!" + __help_centers = {} + + def __init__(self, name): + if name in HelpCenter.__help_centers: + raise UserWarning("HelpCenter '%s' already exists!") + + super(HelpCenter, self).__init__() + self.__name = name + self.__listeners = [] + self.__help_prefix = "" + self.__current_help_link = "" + self.__help_messages = {} + + HelpCenter.__help_centers[name] = self + + + def setHelpMessageLink(self, help_link): + self.__current_help_link = help_link + + help_message = self.resolveHelpLink(help_link) + + if help_message is not None: + self.__help_messages[help_link] = help_message + else: + self.__help_messages[help_link] = self.__default_help_string + + # if not help_link in self.__help_messages: + # help_message = self.resolveHelpLink(help_link) + # if help_message is not None: + # self.__help_messages[help_link] = help_message + # else: + # self.__help_messages[help_link] = self.__default_help_string + + for listener in self.__listeners: + listener.setHelpMessage(help_link, self.__help_messages[help_link]) + + def addListener(self, listener): + self.__listeners.append(listener) + help_link = self.__current_help_link + listener.setHelpMessage(help_link, self.__help_messages[help_link]) + + + # The setHelpLinkPrefix should be set to point to a directory + # containing (directories) with html help files. In the current + # implementation this variable is set from the gert_main.py script. + def setHelpLinkPrefix(self, prefix): + self.__help_prefix = prefix + + def getTemplate(self): + path = self.__help_prefix + "template.html" + if os.path.exists(path) and os.path.isfile(path): + f = open(path, 'r') + template = f.read() + f.close() + return template + else: + return "%s" + + def resolveHelpLink(self, help_link): + """ + Reads a HTML file from the help directory. + The HTML must follow the specification allowed by QT here: http://doc.trolltech.com/4.6/richtext-html-subset.html + """ + + # This code can be used to find widgets with empty help labels + # if label.strip() == "": + # raise AssertionError("NOOOOOOOOOOOOOOOOOOOOO!!!!!!!!!!!!") + + path = self.__help_prefix + help_link + ".html" + if os.path.exists(path) and os.path.isfile(path): + f = open(path, 'r') + help = f.read() + f.close() + return self.getTemplate() % help + else: + # This code automatically creates empty help files + # sys.stderr.write("Missing help file: '%s'\n" % label) + # if not label == "" and not label.find("/") == -1: + # sys.stderr.write("Creating help file: '%s'\n" % label) + # directory, filename = os.path.split(path) + # + # if not os.path.exists(directory): + # os.makedirs(directory) + # + # file_object = open(path, "w") + # file_object.write(label) + # file_object.close() + return None + + + @classmethod + def getHelpCenter(cls, name): + """ @rtype: HelpCenter """ + return HelpCenter.__help_centers.get(name) + + + @staticmethod + def addHelpToAction(action, link, help_center_name="ERT"): + def showHelp(): + HelpCenter.getHelpCenter(help_center_name).setHelpMessageLink(link) + + action.hovered.connect(showHelp) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/CMakeLists.txt index c61d4bada1..83e6cfc49b 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/CMakeLists.txt @@ -1,5 +1,6 @@ set(PYTHON_SOURCES __init__.py + configuration_panel.py ide_panel.py ide_tool.py ide_window.py diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/__init__.py index 5f64a823bc..b76ae2cfc5 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/__init__.py @@ -1,3 +1,4 @@ from .ide_panel import IdePanel +from .configuration_panel import ConfigurationPanel from .ide_window import IdeWindow from .ide_tool import IdeTool diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/pages/configuration_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/configuration_panel.py similarity index 60% rename from ThirdParty/Ert/devel/python/python/ert_gui/pages/configuration_panel.py rename to ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/configuration_panel.py index 76fc829e75..188c23b866 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/pages/configuration_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/configuration_panel.py @@ -1,45 +1,46 @@ +import re import shutil from PyQt4.QtCore import pyqtSignal -from PyQt4.QtGui import QWidget, QVBoxLayout, QToolBar, QStyle, QMessageBox, QSizePolicy +from PyQt4.QtGui import QWidget, QVBoxLayout, QToolBar, QStyle, QMessageBox, QSizePolicy, QFileDialog from ert_gui.ide.highlighter import KeywordHighlighter +from ert_gui.ide.keywords.definitions.path_argument import PathArgument from ert_gui.tools.ide import IdePanel +from ert_gui.widgets import util from ert_gui.widgets.search_box import SearchBox class ConfigurationPanel(QWidget): - reloadApplication = pyqtSignal() + reloadApplication = pyqtSignal(str) - def __init__(self, config_file_path): + def __init__(self, config_file_path, help_tool): QWidget.__init__(self) layout = QVBoxLayout() toolbar = QToolBar("toolbar") - # start_icon = toolbar.style().standardIcon(QStyle.SP_MediaPlay) - # start_action = toolbar.addAction(start_icon, "Run simulations") - # start_action.triggered.connect(self.start) - # - # toolbar.addSeparator() - save_icon = toolbar.style().standardIcon(QStyle.SP_DialogSaveButton) - save_action = toolbar.addAction(save_icon, "Save") + save_action = toolbar.addAction(util.resourceIcon("ide/disk"), "Save") save_action.triggered.connect(self.save) + save_as_action = toolbar.addAction(util.resourceIcon("ide/save_as"), "Save As") + save_as_action.triggered.connect(self.saveAs) + # reload_icon = toolbar.style().standardIcon(QStyle.SP_BrowserReload) # reload_action = toolbar.addAction(reload_icon, "Reload") # reload_action.triggered.connect(self.reload) toolbar.addSeparator() + toolbar.addAction(help_tool.getAction()) + + stretchy_separator = QWidget() stretchy_separator.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding) toolbar.addWidget(stretchy_separator) - - search = SearchBox() search.setMaximumWidth(200) search.setContentsMargins(5, 2, 5, 2) @@ -60,6 +61,7 @@ def __init__(self, config_file_path): search.filterChanged.connect(self.highlighter.setSearchString) + self.parseDefines(config_file_text) self.ide_panel.document().setPlainText(config_file_text) cursor = self.ide_panel.textCursor() @@ -70,22 +72,12 @@ def __init__(self, config_file_path): self.setLayout(layout) - # self.addLabeledSeparator("Case initialization") - # case_combo = ComboChoice(CaseSelectorModel(), "Current case", "init/current_case_selection") - # case_configurator = CaseInitializationConfigurationPanel() - # self.addRow(case_combo, case_configurator) - # - # self.addLabeledSeparator("Queue System") - # - # queue_system_selector = QueueSystemSelector() - # queue_system_combo = ComboChoice(queue_system_selector, "Queue system", "config/queue_system/queue_system") - # queue_system_configurator = QueueSystemConfigurationPanel() - # self.addRow(queue_system_combo, queue_system_configurator) def getName(self): return "Configuration" + def save(self): backup_path = "%s.backup" % self.config_file_path shutil.copyfile(self.config_file_path, backup_path) @@ -97,11 +89,35 @@ def save(self): result = QMessageBox.information(self, "Reload required!", message, QMessageBox.Yes | QMessageBox.No) if result == QMessageBox.Yes: - self.reload() + self.reload(self.config_file_path) + + + def saveAs(self): + config_file = QFileDialog.getSaveFileName(self, "Save Configuration File As") + config_file = str(config_file) - def reload(self): - self.reloadApplication.emit() + if len(config_file) > 0: + with open(config_file, "w") as f: + f.write(self.ide_panel.getText()) + + message = "The current configuration file has been saved to a new file. Do you want to restart Ert using the new configuration file?" + result = QMessageBox.information(self, "Restart Ert?", message, QMessageBox.Yes | QMessageBox.No) + + if result == QMessageBox.Yes: + self.reload(config_file) + + + def reload(self, path): + self.reloadApplication.emit(path) def start(self): print("Start!") + + def parseDefines(self, text): + pattern = re.compile("[ \t]*DEFINE[ \t]*(\S+)[ \t]*(\S+)") + + match = re.findall(pattern, text) + + for m in match: + PathArgument.addDefine(m[0], m[1]) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_panel.py index 0b12b0f9bd..280dde1774 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_panel.py @@ -1,7 +1,7 @@ import re from PyQt4.QtCore import Qt, QEvent, QDir, QRegExp, QChar from PyQt4.QtGui import QPlainTextEdit, QTextOption, QCompleter, QStringListModel, QFont, QColor, QShortcut, QKeySequence, QTextCursor, QFileSystemModel, QTextDocument -from ert_gui.widgets.help_dock import HelpDock +from ert_gui.tools import HelpCenter class IdePanel(QPlainTextEdit): @@ -37,11 +37,12 @@ def showHelp(self): configuration_line = user_data.configuration_line if configuration_line.keyword().hasKeywordDefinition(): - HelpDock.getInstance().setHelpMessageLink("config/" + configuration_line.documentationLink()) - # print(configuration_line.documentationLink()) + HelpCenter.getHelpCenter("ERT").setHelpMessageLink("config/" + configuration_line.documentationLink()) + def getText(self): - return str(self.document().toPlainText()) + return self.document().toPlainText() + def eventFilter(self, qobject, qevent): if qobject == self and qevent.type() == QEvent.ToolTip: diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_tool.py index 97037da706..6409842bad 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_tool.py @@ -5,16 +5,17 @@ class IdeTool(Tool): - def __init__(self, path, reload_function): - super(IdeTool, self).__init__("Configure", util.resourceIcon("ide/widgets")) + def __init__(self, path, reload_function, help_tool): + super(IdeTool, self).__init__("Configure", "tools/ide", util.resourceIcon("ide/widgets")) self.ide_window = None self.path = path self.reload_function = reload_function + self.help_tool = help_tool def trigger(self): if self.ide_window is None: - self.ide_window = ref(IdeWindow(self.path, self.parent())) + self.ide_window = ref(IdeWindow(self.path, self.parent(), self.help_tool)) self.ide_window().reloadTriggered.connect(self.reload_function) self.ide_window().show() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_window.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_window.py index d33fb263e0..b123c7171b 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_window.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/ide/ide_window.py @@ -1,60 +1,59 @@ -from PyQt4.QtCore import Qt, pyqtSignal -from PyQt4.QtGui import QMainWindow, QDockWidget -from ert_gui.ide.wizards import WizardView -from ert_gui.pages.configuration_panel import ConfigurationPanel -from ert_gui.widgets.help_dock import HelpDock +from PyQt4.QtCore import pyqtSignal +from PyQt4.QtGui import QMainWindow + +from ert_gui.tools.ide.configuration_panel import ConfigurationPanel class IdeWindow(QMainWindow): - reloadTriggered = pyqtSignal() + reloadTriggered = pyqtSignal(str) - def __init__(self, path, parent): + def __init__(self, path, parent, help_tool): QMainWindow.__init__(self, parent) self.resize(900, 900) + self.__position = None self.__geometry = None - self.__configuration_panel = ConfigurationPanel(path) + self.__configuration_panel = ConfigurationPanel(path, help_tool) self.__configuration_panel.reloadApplication.connect(self.reloadTriggered) self.setCentralWidget(self.__configuration_panel) self.setWindowTitle("Configuration") self.activateWindow() - self.__view_menu = self.menuBar().addMenu("&View") - - wizard_panel = WizardView() - wizard_panel.addGroup("Parameters") - wizard_panel.addItemToGroup("Parameters", "Add Summary key") - wizard_panel.addItemToGroup("Parameters", "Add Field parameter") - wizard_panel.addItemToGroup("Parameters", "Add Data Keyword") - wizard_panel.addGroup("Eclipse") - wizard_panel.addItemToGroup("Eclipse", "Setup Eclipse parameters") - wizard_panel.addGroup("Observations") - wizard_panel.addItemToGroup("Observations", "Add Observations") - wizard_panel.expandAll() - self.addDock("Wizards", wizard_panel) - self.__help_dock = HelpDock.getInstance() # todo Turn HelpDock into a panel - help_dock = self.addDockWidget(Qt.RightDockWidgetArea, self.__help_dock) + # wizard_panel = WizardView() + # wizard_panel.addGroup("Parameters") + # wizard_panel.addItemToGroup("Parameters", "Add Summary key") + # wizard_panel.addItemToGroup("Parameters", "Add Field parameter") + # wizard_panel.addItemToGroup("Parameters", "Add Data Keyword") + # wizard_panel.addGroup("Eclipse") + # wizard_panel.addItemToGroup("Eclipse", "Setup Eclipse parameters") + # wizard_panel.addGroup("Observations") + # wizard_panel.addItemToGroup("Observations", "Add Observations") + # wizard_panel.expandAll() + # self.addDock("Wizards", wizard_panel) def closeEvent(self, q_close_event): + self.__position = self.pos() self.__geometry = self.geometry() self.hide() q_close_event.ignore() def show(self): - if not self.__geometry is None: + if self.__geometry is not None and self.__position is not None: self.setGeometry(self.__geometry) + self.move(self.__position) QMainWindow.show(self) - def addDock(self, name, widget, area=Qt.RightDockWidgetArea, allowed_areas=Qt.AllDockWidgetAreas): - dock_widget = QDockWidget(name) - dock_widget.setObjectName("%sDock" % name) - dock_widget.setWidget(widget) - dock_widget.setAllowedAreas(allowed_areas) - - self.addDockWidget(area, dock_widget) - self.__view_menu.addAction(dock_widget.toggleViewAction()) - return dock_widget + # def addDock(self, name, widget, area=Qt.RightDockWidgetArea, allowed_areas=Qt.AllDockWidgetAreas): + # dock_widget = QDockWidget(name) + # dock_widget.setObjectName("%sDock" % name) + # dock_widget.setWidget(widget) + # dock_widget.setAllowedAreas(allowed_areas) + # + # self.addDockWidget(area, dock_widget) + # + # self.__view_menu.addAction(dock_widget.toggleViewAction()) + # return dock_widget diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/CMakeLists.txt new file mode 100644 index 0000000000..766ceb6583 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/CMakeLists.txt @@ -0,0 +1,11 @@ +set(PYTHON_SOURCES + __init__.py + load_results_panel.py + load_results_realisations_model.py + load_results_tool.py + load_results_iterations_model.py + +) + +add_python_package("python.ert_gui.tools.load_results" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools/load_results "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/__init__.py new file mode 100644 index 0000000000..dd193717fa --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/__init__.py @@ -0,0 +1,4 @@ +from .load_results_realisations_model import LoadResultsRealizationsModel +from .load_results_iterations_model import LoadResultsIterationsModel +from .load_results_panel import LoadResultsPanel +from .load_results_tool import LoadResultsTool diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_iterations_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_iterations_model.py new file mode 100644 index 0000000000..f9a0f9879b --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_iterations_model.py @@ -0,0 +1,59 @@ +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'load_results_iterations_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.util import BoolVector +from ert_gui.models.mixins import BasicModelMixin + + +class LoadResultsIterationsModel(BasicModelMixin): + + + def __init__(self, iterations_count): + self.__iterations_count = iterations_count + self.__active_iteration = self.getDefaultValue() + self.__custom = False + super(LoadResultsIterationsModel, self).__init__() + + def getValue(self): + """ @rtype: str """ + return self.__active_iteration + + def setValue(self, active_iterations): + if active_iterations is None or active_iterations.strip() == "" or active_iterations == self.getDefaultValue(): + self.__custom = False + self.__active_iteration = self.getDefaultValue() + else: + self.__custom = True + self.__active_iteration = active_iterations + + def getDefaultValue(self): + return 0 + + def getActiveIteration(self): + """ @rtype: int """ + return int(self.__active_iteration) + + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_panel.py new file mode 100644 index 0000000000..b602b50420 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_panel.py @@ -0,0 +1,89 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'load_results_panel.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from PyQt4.QtGui import QWidget, QFormLayout, QComboBox, QLineEdit, QLabel, QTextEdit +from ert_gui.ide.keywords.definitions import RangeStringArgument, IntegerArgument +from ert_gui.models.connectors import EnsembleSizeModel +from ert_gui.models.connectors.init import CaseSelectorModel +from ert_gui.models.connectors.load_results import LoadResultsModel +from ert_gui.tools.load_results import LoadResultsRealizationsModel, LoadResultsIterationsModel +from ert_gui.models.qt.all_cases_model import AllCasesModel +from ert_gui.widgets.string_box import StringBox + + +class LoadResultsPanel(QWidget): + + def __init__(self): + QWidget.__init__(self) + + self.setMinimumWidth(500) + self.setMinimumHeight(200) + self.__dynamic = False + + self.setWindowTitle("Load results manually") + self.activateWindow() + + layout = QFormLayout() + current_case = CaseSelectorModel().getCurrentChoice() + + run_path_text = QTextEdit() + run_path_text.setText(self.readCurrentRunPath()) + run_path_text.setDisabled(True) + run_path_text.setFixedHeight(80) + + layout.addRow("Load data from current run path: ",run_path_text) + + self.__case_model = AllCasesModel() + self.__case_combo = QComboBox() + self.__case_combo.setSizeAdjustPolicy(QComboBox.AdjustToMinimumContentsLength) + self.__case_combo.setMinimumContentsLength(20) + self.__case_combo.setModel(self.__case_model) + self.__case_combo.setCurrentIndex(self.__case_model.indexOf(current_case)) + layout.addRow("Load into case:",self.__case_combo) + + + self.__active_realizations_model = LoadResultsRealizationsModel(EnsembleSizeModel().getValue()) + self.__active_realizations_field = StringBox(self.__active_realizations_model, "Realizations to load", "load_results_manually/Realizations") + self.__active_realizations_field.setValidator(RangeStringArgument()) + layout.addRow(self.__active_realizations_field.getLabel(), self.__active_realizations_field) + + self.__iterations_count = LoadResultsModel().getIterationCount() + + self._iterations_model = LoadResultsIterationsModel(self.__iterations_count) + self._iterations_field = StringBox(self._iterations_model, "Iteration to load", "load_results_manually/iterations") + self._iterations_field.setValidator(IntegerArgument()) + layout.addRow(self._iterations_field.getLabel(), self._iterations_field) + + self.setLayout(layout) + + def readCurrentRunPath(self): + current_case = CaseSelectorModel().getCurrentChoice() + run_path = LoadResultsModel().getCurrentRunPath() + run_path = run_path.replace("",current_case) + run_path = run_path.replace("",current_case) + return run_path + + + def load(self): + all_cases = self.__case_model.getAllItems() + selected_case = all_cases[self.__case_combo.currentIndex()] + realizations = self.__active_realizations_model.getActiveRealizationsMask() + iteration = self._iterations_model.getActiveIteration() + + LoadResultsModel().loadResults(selected_case, realizations, iteration) + + def setCurrectCase(self): + current_case = CaseSelectorModel().getCurrentChoice() + self.__case_combo.setCurrentIndex(self.__case_model.indexOf(current_case)) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_realisations_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_realisations_model.py new file mode 100644 index 0000000000..a0a6623257 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_realisations_model.py @@ -0,0 +1,70 @@ +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'load_results_realizations_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.util import BoolVector +from ert_gui.models.mixins import BasicModelMixin + + +class LoadResultsRealizationsModel(BasicModelMixin): + + + def __init__(self, realization_count): + self.__realization_count = realization_count + self.__active_realizations = self.getDefaultValue() + self.__custom = False + super(LoadResultsRealizationsModel, self).__init__() + + + def getValue(self): + """ @rtype: str """ + return self.__active_realizations + + def setValue(self, active_realizations): + if active_realizations is None or active_realizations.strip() == "" or active_realizations == self.getDefaultValue(): + self.__custom = False + self.__active_realizations = self.getDefaultValue() + else: + self.__custom = True + self.__active_realizations = active_realizations + + + def getDefaultValue(self): + return "0-%d" % (self.__realization_count - 1) + + def getActiveRealizationsMask(self): + mask = BoolVector(False, self.__realization_count) + mask.updateActiveMask(self.getValue(), mask) + # mask = BoolVector.active_mask(self.getValue()) + + if mask is None: + raise ValueError("Error while parsing range string!") + + if len(mask) > self.__realization_count: + raise ValueError("Mask size changed %d != %d!" % (self.__realization_count, len(mask))) + + return mask + + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_tool.py new file mode 100644 index 0000000000..cc11be51af --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/load_results/load_results_tool.py @@ -0,0 +1,50 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'load_results_tool.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert_gui.models.connectors.load_results import LoadResultsModel +from ert_gui.tools import Tool +from ert_gui.tools.load_results import LoadResultsPanel +from ert_gui.widgets import util +from ert_gui.widgets.closable_dialog import ClosableDialog + + +class LoadResultsTool(Tool): + def __init__(self): + super(LoadResultsTool, self).__init__("Load results manually", "tools/load_manually", util.resourceIcon("ide/table_import")) + self.__import_widget = None + self.__dialog = None + self.setVisible(False) + + + + + def trigger(self): + if self.__import_widget is None: + self.__import_widget = LoadResultsPanel() + self.__dialog = ClosableDialog("Load results manually", self.__import_widget, self.parent()) + self.__import_widget.setCurrectCase() + self.__dialog.addButton("Load", self.load) + self.__dialog.exec_() + + def load(self): + self.__import_widget.load() + self.__dialog.accept() + + def toggleAdvancedMode(self, advanced_mode): + self.setVisible(advanced_mode) + if not LoadResultsModel().isValidRunPath(): + self.setEnabled(False) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/CMakeLists.txt index d368ac4cfd..3f599f743f 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/CMakeLists.txt @@ -1,6 +1,5 @@ set(PYTHON_SOURCES __init__.py - all_cases_model.py case_init_configuration.py manage_cases_tool.py ) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/case_init_configuration.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/case_init_configuration.py index 6988793bf8..3789ebe5da 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/case_init_configuration.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/case_init_configuration.py @@ -6,7 +6,7 @@ from ert_gui.models.connectors.init.init_members import InitializationMembersModel from ert_gui.models.connectors.init.init_parameters import InitializationParametersModel from ert_gui.models.connectors.init.initialized_case_selector import InitializedCaseSelectorModel -from ert_gui.tools.manage_cases.all_cases_model import AllCasesModel +from ert_gui.models.qt.all_cases_model import AllCasesModel from ert_gui.widgets.button import Button from ert_gui.widgets.check_list import CheckList from ert_gui.widgets.combo_choice import ComboChoice @@ -15,11 +15,13 @@ from ert_gui.widgets.keyword_list import KeywordList from ert_gui.widgets.row_group import RowGroup from ert_gui.widgets.row_panel import RowPanel +from ert_gui.widgets.util import may_take_a_long_time from ert_gui.widgets.validated_dialog import ValidatedDialog class CaseInitializationConfigurationPanel(RowPanel): + @may_take_a_long_time def __init__(self): RowPanel.__init__(self, "Case Management") self.setMinimumWidth(600) @@ -129,7 +131,6 @@ def addInitializeFromExistingTab(self): self.addSpace(10) - def addShowCaseInfo(self): self.addTab("Case Info") @@ -157,7 +158,8 @@ def addShowCaseInfo(self): area_widget.addStretch() self.addRow(area_widget) - self.showInfoForCase() + choice = CaseSelectorModel().getCurrentChoice() + self.combo.setCurrentIndex(model.indexOf(choice)) def showInfoForCase(self): diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/manage_cases_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/manage_cases_tool.py index 3ffa5a96cf..f718df30f8 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/manage_cases_tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/manage_cases/manage_cases_tool.py @@ -6,7 +6,7 @@ class ManageCasesTool(Tool): def __init__(self): - super(ManageCasesTool, self).__init__("Manage Cases", util.resourceIcon("ide/database_gear")) + super(ManageCasesTool, self).__init__("Manage Cases", "tools/manage_cases", util.resourceIcon("ide/database_gear")) def trigger(self): diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/CMakeLists.txt index f75d2f0bd4..55d30a0e4d 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/CMakeLists.txt @@ -1,13 +1,25 @@ set(PYTHON_SOURCES __init__.py + color_chooser.py + customize_plot_widget.py data_type_keys_list_model.py data_type_keys_widget.py + data_type_proxy_model.py + export_plot.py + filter_popup.py + plot_bridge.py plot_case_model.py plot_case_selection_widget.py + plot_metrics_tracker.py plot_panel.py + plot_panel_tracker.py + plot_scale_widget.py plot_tool.py + plot_tool_bar.py plot_window.py + report_step_widget.py ) add_python_package("python.ert_gui.tools.plot" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools/plot "${PYTHON_SOURCES}" True) +add_subdirectory(data) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/__init__.py index ba8926129d..b31e60ab3e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/__init__.py @@ -1,10 +1,27 @@ +from .plot_bridge import PlotBridge +from .export_plot import ExportPlot +from .filter_popup import FilterPopup + + from .data_type_keys_list_model import DataTypeKeysListModel +from .data_type_proxy_model import DataTypeProxyModel from .data_type_keys_widget import DataTypeKeysWidget from .plot_case_model import PlotCaseModel from .plot_case_selection_widget import CaseSelectionWidget +from .report_step_widget import ReportStepWidget +from .plot_scale_widget import PlotScalesWidget + +from .plot_tool_bar import PlotToolBar +from .color_chooser import ColorChooser +from .customize_plot_widget import CustomizePlotWidget + +from .plot_panel_tracker import PlotPanelTracker +from .plot_metrics_tracker import PlotMetricsTracker from .plot_panel import PlotPanel from .plot_window import PlotWindow from .plot_tool import PlotTool + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/color_chooser.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/color_chooser.py new file mode 100644 index 0000000000..6650254508 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/color_chooser.py @@ -0,0 +1,87 @@ +from PyQt4.QtCore import QSize, QRect, pyqtSignal +from PyQt4.QtGui import QWidget, QPainter, QHBoxLayout, QLabel, QFrame, QColor, QColorDialog + + +class ColorBox(QFrame): + colorChanged = pyqtSignal(QColor) + + """A widget that shows a colored box""" + def __init__(self, color): + QFrame.__init__(self) + self.setFrameStyle(QFrame.Panel | QFrame.Sunken) + self.setMaximumSize(QSize(15, 15)) + self.setMinimumSize(QSize(15, 15)) + + self.tile_size = 7 + self.tile_colors = [QColor(255, 255, 255), QColor(200, 200, 255)] + + self.color = color + + def paintEvent(self, paint_event): + """Paints the box""" + painter = QPainter(self) + rect = self.contentsRect() + tile_count = 3 + tile_size = rect.width() / tile_count + painter.save() + painter.translate(rect.x(), rect.y()) + + color_index = 0 + for y in range(tile_count): + + if y % 2 == 1: + color_index = 1 + else: + color_index = 0 + + for x in range(tile_count): + tile_rect = QRect(x * tile_size, y * tile_size, tile_size, tile_size) + painter.fillRect(tile_rect, self.tile_colors[color_index]) + + color_index += 1 + if color_index >= len(self.tile_colors): + color_index = 0 + + painter.restore() + painter.fillRect(rect, self.color) + + QFrame.paintEvent(self, paint_event) + + def mouseReleaseEvent(self, QMouseEvent): + color = QColorDialog.getColor(self.color, self, "Select color", QColorDialog.ShowAlphaChannel) + + if color.isValid(): + self.color = color + self.update() + self.colorChanged.emit(self.color) + + +class ColorChooser(QWidget): + colorChanged = pyqtSignal(QColor) + + """Combines a ColorBox with a label""" + def __init__(self, label, color): + QWidget.__init__(self) + + self.setMinimumWidth(140) + self.setMaximumHeight(25) + + layout = QHBoxLayout() + layout.setMargin(0) + layout.setSpacing(2) + + self.color_box = ColorBox(color) + self.color_box.setToolTip("Click to change color.") + self.color_box.colorChanged.connect(self.colorChanged) + + layout.addWidget(self.color_box) + self.color_label = QLabel(label) + layout.addWidget(self.color_label) + layout.addStretch() + + self.setLayout(layout) + self.label = label + + def setColor(self, color): + self.color_box.color = color + self.color_box.update() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/customize_plot_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/customize_plot_widget.py new file mode 100644 index 0000000000..4dae2928ed --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/customize_plot_widget.py @@ -0,0 +1,68 @@ +from PyQt4.QtCore import pyqtSignal +from PyQt4.QtGui import QWidget, QVBoxLayout, QCheckBox, QColor + +from ert_gui.tools.plot import ColorChooser + +class CustomizePlotWidget(QWidget): + + customPlotSettingsChanged = pyqtSignal(dict) + + def __init__(self): + QWidget.__init__(self) + self.__custom = { } + + self.__layout = QVBoxLayout() + self.addCheckBox("error_bar_only", "Show only error bars", False) + self.addCheckBox("show_observations", "Show observations", True) + self.addCheckBox("show_refcase", "Show refcase", True) + self.__layout.addSpacing(20) + + self.addColorChooser("observation", "Observation", QColor(0, 0, 0, 255)) + self.addColorChooser("observation_area", "Observation Error", QColor(0, 0, 0, 38)) + self.addColorChooser("observation_error_bar", "Observation Error Bar", QColor(0, 0, 0, 255)) + self.addColorChooser("refcase", "Refcase", QColor(0, 0, 0, 178)) + self.addColorChooser("ensemble_1", "Case #1", QColor(56, 108, 176, 204)) + self.addColorChooser("ensemble_2", "Case #2", QColor(127, 201, 127, 204)) + self.addColorChooser("ensemble_3", "Case #3", QColor(253, 192, 134, 204)) + self.addColorChooser("ensemble_4", "Case #4", QColor(240, 2, 127, 204)) + self.addColorChooser("ensemble_5", "Case #5", QColor(191, 91, 23, 204)) + + self.__layout.addStretch() + + self.setLayout(self.__layout) + + def emitChange(self): + self.customPlotSettingsChanged.emit(self.__custom) + + def addCheckBox(self, name, description, default_value): + checkbox = QCheckBox(description) + checkbox.setChecked(default_value) + self.__custom[name] = default_value + + def toggle(checked): + self.__custom[name] = checked + self.emitChange() + + checkbox.toggled.connect(toggle) + + self.__layout.addWidget(checkbox) + + def createJSColor(self, color): + return "rgba(%d, %d, %d, %f)" % (color.red(), color.green(), color.blue(), color.alphaF()) + + def getCustomSettings(self): + return self.__custom + + def addColorChooser(self, name, label, default_color): + color_chooser = ColorChooser(label, default_color) + self.__custom[name] = self.createJSColor(default_color) + + def colorChanged(color): + self.__custom[name] = self.createJSColor(color) + self.emitChange() + + color_chooser.colorChanged.connect(colorChanged) + + self.__layout.addWidget(color_chooser) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/CMakeLists.txt new file mode 100644 index 0000000000..46c21eebf6 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/CMakeLists.txt @@ -0,0 +1,13 @@ +set(PYTHON_SOURCES + __init__.py + ensemble_plot_data.py + histogram_plot_data.py + histogram_plot_data_factory.py + observation_plot_data.py + plot_data.py + plot_data_fetcher.py + refcase_plot_data.py +) + +add_python_package("python.ert_gui.tools.plot.data" ${PYTHON_INSTALL_PREFIX}/ert_gui/tools/plot/data "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/__init__.py new file mode 100644 index 0000000000..e5778b3bd6 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/__init__.py @@ -0,0 +1,7 @@ +from .histogram_plot_data import CaseHistogramPlotData, HistogramPlotData +from .histogram_plot_data_factory import HistogramPlotDataFactory, ReportStepLessHistogramPlotDataFactory +from .observation_plot_data import ObservationPlotData +from .refcase_plot_data import RefcasePlotData +from .ensemble_plot_data import EnsemblePlotData +from .plot_data import PlotData +from .plot_data_fetcher import PlotDataFetcher \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/ensemble_plot_data.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/ensemble_plot_data.py new file mode 100644 index 0000000000..1f909d6c22 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/ensemble_plot_data.py @@ -0,0 +1,143 @@ +from PyQt4.QtCore import QObject, pyqtSlot, QString +import math + + +class EnsemblePlotData(QObject): + def __init__(self, name, case_name, parent=None): + QObject.__init__(self, parent) + + self.__name = name + self.__case_name = case_name + + self.__x_values = None + self.__y_values = None + self.__y_min_values = None + self.__y_max_values = None + + self.__has_data = False + + self.__min_x = None + self.__max_x = None + self.__min_y = None + self.__max_y = None + + + + def setEnsembleData(self, x_values, y_values, y_min_values, y_max_values): + if x_values is not None and y_values is not None and y_min_values is not None and y_max_values is not None: + self.__x_values = x_values + self.__y_values = y_values + + self.__y_min_values = y_min_values + self.__y_max_values = y_max_values + + self.__has_data = True + + + def updateBoundaries(self, min_x, max_x, min_y, max_y): + if min_x is not None and (self.__min_x is None or self.__min_x > min_x): + self.__min_x = min_x + + if max_x is not None and (self.__max_x is None or self.__max_x < max_x): + self.__max_x = max_x + + if min_y is not None and (self.__min_y is None or self.__min_y > min_y): + self.__min_y = min_y + + if max_y is not None and (self.__max_y is None or self.__max_y < max_y): + self.__max_y = max_y + + + + @pyqtSlot(result=str) + def name(self): + return self.__name + + @pyqtSlot(result=str) + def caseName(self): + return self.__case_name + + @pyqtSlot(result="QVariantList") + def xValues(self): + return self.__x_values + + @pyqtSlot(result="QVariantList") + def yValues(self): + return self.__y_values + + @pyqtSlot(result="QVariantList") + def yMinValues(self): + return self.__y_min_values + + @pyqtSlot(result="QVariantList") + def yMaxValues(self): + return self.__y_max_values + + @pyqtSlot(QString, result=int) + def realizationCount(self): + return len(self.__y_values) + + @pyqtSlot(result=float) + def minX(self): + return self.__min_x + + @pyqtSlot(result=float) + def maxX(self): + return self.__max_x + + @pyqtSlot(result=float) + def minY(self): + return self.__min_y + + @pyqtSlot(result=float) + def maxY(self): + return self.__max_y + + @pyqtSlot(result=bool) + def isValid(self): + return self.hasBoundaries() and self.hasData() + + @pyqtSlot(result=bool) + def hasBoundaries(self): + return self.__min_x is not None and self.__max_x is not None and self.__min_y is not None and self.__max_y is not None + + @pyqtSlot(result=bool) + def hasData(self): + return self.__has_data + + + + @pyqtSlot(float, result="QVariantList") + def xPercentile(self, percentile): + values = [] + transposed_data = map(list, map(None, *self.__y_values)) + for row in transposed_data: + row = sorted(row) + values.append(self.percentile(row, percentile)) + + return values + + + def percentile(self, N, percent, key=lambda x:x): + """ + Find the percentile of a list of values. + + @parameter N - is a list of values. Note N MUST BE already sorted. + @parameter percent - a float value from 0.0 to 1.0. + @parameter key - optional key function to compute value from each element of N. + + @return - the percentile of the values + """ + if not N: + return None + k = (len(N) - 1) * percent + f = math.floor(k) + c = math.ceil(k) + + if f == c: + return key(N[int(k)]) + + d0 = key(N[int(f)]) * (c - k) + d1 = key(N[int(c)]) * (k - f) + + return d0 + d1 \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data.py new file mode 100644 index 0000000000..759c058e65 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data.py @@ -0,0 +1,167 @@ +from math import ceil, sqrt +from PyQt4.QtCore import QObject, pyqtSlot, QString + + +class CaseHistogramPlotData(QObject): + def __init__(self, case_name, report_step_time, parent=None): + QObject.__init__(self, parent) + + self.__case_name = case_name + self.__report_step_time = report_step_time + + self.__min = None + self.__max = None + + self.__samples = [] + + + def addSample(self, sample): + self.__samples.append(sample) + + if self.__min is None or self.__min > sample: + self.__min = sample + + if self.__max is None or self.__max < sample: + self.__max = sample + + def __len__(self): + return len(self.__samples) + + + @pyqtSlot(result=float) + def min(self): + return self.__min + + + @pyqtSlot(result=float) + def max(self): + return self.__max + + + @pyqtSlot(result="QVariantList") + def samples(self): + return self.__samples + + +class HistogramPlotData(QObject): + def __init__(self, name, report_step_time, parent=None): + QObject.__init__(self, parent) + + self.__name = name + self.__report_step_time = report_step_time + + self.__min = None + self.__max = None + + self.__case_list = [] + self.__case_histograms = {} + + self.__observation = None + self.__observation_error = None + self.__refcase = None + + + def addCase(self, case_name): + if not case_name in self.__case_histograms: + self.__case_histograms[case_name] = CaseHistogramPlotData(case_name, self.__report_step_time, parent=self) + self.__case_list.append(case_name) + + + def addSample(self, case_name, sample): + self.addCase(case_name) + + self.__case_histograms[case_name].addSample(sample) + + if self.__min is None or self.__min > sample: + self.__min = sample + + if self.__max is None or self.__max < sample: + self.__max = sample + + + def setRefcase(self, value): + self.__refcase = value + + if self.__min is None or self.__min > value: + self.__min = value + + if self.__max is None or self.__max < value: + self.__max = value + + def setObservation(self, value, error): + self.__observation = value + self.__observation_error = error + + if value >= 0: + error_value = max(0, value - error) + else: + error_value = value - error + + if self.__min is None or self.__min > error_value: + self.__min = error_value + + if self.__max is None or self.__max < value + error: + self.__max = value + error + + + @pyqtSlot(result=str) + def name(self): + return self.__name + + + @pyqtSlot(result=bool) + def hasRefcase(self): + return self.__refcase is not None + + @pyqtSlot(result=bool) + def hasObservation(self): + return self.__observation is not None + + @pyqtSlot(result=float) + def refcase(self): + return self.__refcase + + @pyqtSlot(result=float) + def observation(self): + return self.__observation + + @pyqtSlot(result=float) + def observationError(self): + return self.__observation_error + + @pyqtSlot(QString, result=bool) + def hasCaseHistogram(self, case_name): + return str(case_name) in self.__case_histograms + + @pyqtSlot(QString, result=QObject) + def caseHistogram(self, case_name): + return self.__case_histograms[str(case_name)] + + @pyqtSlot(result=float) + def min(self): + return self.__min + + @pyqtSlot(result=float) + def max(self): + return self.__max + + @pyqtSlot(result=int) + def reportStepTime(self): + return self.__report_step_time + + @pyqtSlot(result=int) + def maxCount(self): + max_sample_count = 0 + for histogram in self.__case_histograms.values(): + max_sample_count = max(max_sample_count, len(histogram)) + + return max_sample_count + + @pyqtSlot(QString, result=bool) + def isValid(self, case_name): + return self.hasObservation() or self.hasRefcase() or self.hasCaseHistogram(case_name) + + @pyqtSlot(result=int) + def numberOfBins(self): + return ceil(sqrt(self.maxCount())) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data_factory.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data_factory.py new file mode 100644 index 0000000000..5a942bee59 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/histogram_plot_data_factory.py @@ -0,0 +1,149 @@ +from ert_gui.tools.plot.data import HistogramPlotData + + +class HistogramPlotDataFactory(object): + def __init__(self, name): + super(HistogramPlotDataFactory, self).__init__() + self.__name = name + + self.__observations = None + self.__refcase = None + self.__case_names = [] + self.__ensemble_data = {} + + def setObservations(self, x_values, y_values, std_values, min_y, max_y): + if x_values is not None: + self.__observations = {"x_values": x_values, + "y_values": y_values, + "std_values": std_values, + "min_y": min_y, + "max_y": max_y, + "reverse_lookup": {}} + + rl = self.__observations["reverse_lookup"] + + for index in range(len(x_values)): + x = x_values[index] + rl[x] = index + + + def hasObservationSample(self, x_value): + return x_value in self.__observations["reverse_lookup"] + + + def setRefcase(self, x_values, y_values, min_y, max_y): + if x_values is not None and y_values is not None: + self.__refcase = {"x_values": x_values, + "y_values": y_values, + "min_y": min_y, + "max_y": max_y, + "reverse_lookup": {}} + + rl = self.__refcase["reverse_lookup"] + + for index in range(len(x_values)): + x = x_values[index] + rl[x] = index + + + def hasRefcaseSample(self, x_value): + return x_value in self.__refcase["reverse_lookup"] + + def addEnsembleData(self, case_name, x_values, y_values, min_y, max_y): + self.__case_names.append(case_name) + + ensemble_data = {"x_values": x_values, + "y_values": y_values, + "min_y": min_y, + "max_y": max_y, + "reverse_lookup": {}} + + rl = ensemble_data["reverse_lookup"] + + for index in range(len(x_values)): + x = x_values[index] + rl[x] = index + + self.__ensemble_data[case_name] = ensemble_data + + def hasEnsembleSample(self, case_name, x_value): + ensemble_data = self.__ensemble_data[case_name] + return x_value in ensemble_data["reverse_lookup"] + + def hasEnsembleData(self): + return len(self.__case_names) > 0 + + def hasObservations(self): + """ @rtype: bool """ + return self.__observations is not None + + def hasRefcaseData(self): + """ @rtype: bool """ + return self.__refcase is not None + + def hasRefcase(self): + """ @rtype: bool """ + return self.__refcase is not None + + + def observationIndex(self, x_value): + return self.__observations["reverse_lookup"][x_value] + + def refcaseIndex(self, x_value): + return self.__refcase["reverse_lookup"][x_value] + + def ensembleIndex(self, case_name, x_value): + ensemble = self.__ensemble_data[case_name] + return ensemble["reverse_lookup"][x_value] + + def ensembleData(self, case_name): + """ @rtype: EnsemblePlotData """ + return self.__ensemble_data[case_name] + + def getEnsembleSamples(self, case_name, x_value): + """ @rtype: list of float """ + index = self.ensembleIndex(case_name, x_value) + ensemble = self.ensembleData(case_name) + result = [] + for realization in ensemble["y_values"]: + if len(realization) > 0 and index < len(realization): + result.append(realization[index]) + + return result + + + def getHistogramData(self, x_value): + """ @rtype: HistogramPlotData """ + histogram_data = HistogramPlotData(self.__name, x_value) + + if self.hasObservations(): + if self.hasObservationSample(x_value): + index = self.observationIndex(x_value) + value = self.__observations["y_values"][index] + std = self.__observations["std_values"][index] + histogram_data.setObservation(value, std) + + if self.hasRefcase(): + if self.hasRefcaseSample(x_value): + index = self.refcaseIndex(x_value) + value = self.__refcase["y_values"][index] + histogram_data.setRefcase(value) + + for case_name in self.__case_names: + histogram_data.addCase(case_name) + + if self.hasEnsembleSample(case_name, x_value): + for sample in self.getEnsembleSamples(case_name, x_value): + histogram_data.addSample(case_name, sample) + + return histogram_data + + +class ReportStepLessHistogramPlotDataFactory(HistogramPlotDataFactory): + def __init__(self, name): + super(ReportStepLessHistogramPlotDataFactory, self).__init__(name) + + def getHistogramData(self, x_value): + return super(ReportStepLessHistogramPlotDataFactory, self).getHistogramData(0) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/observation_plot_data.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/observation_plot_data.py new file mode 100644 index 0000000000..37fc4685e9 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/observation_plot_data.py @@ -0,0 +1,91 @@ +from PyQt4.QtCore import QObject, pyqtSlot + + +class ObservationPlotData(QObject): + def __init__(self, name, parent=None): + QObject.__init__(self, parent) + + self.__name = name + self.__x_values = [] + self.__y_values = [] + self.__std_values = [] + self.__is_continuous = True + self.__has_data = False + + self.__min_x = None + self.__max_x = None + self.__min_y = None + self.__max_y = None + + + def setObservationData(self, x_values, y_values, std_values, continuous): + if x_values is not None and y_values is not None and std_values is not None: + self.__x_values = x_values + self.__y_values = y_values + self.__std_values = std_values + self.__is_continuous = continuous + self.__has_data = True + + + def updateBoundaries(self, min_x, max_x, min_y, max_y): + if min_x is not None and (self.__min_x is None or self.__min_x > min_x): + self.__min_x = min_x + + if max_x is not None and (self.__max_x is None or self.__max_x < max_x): + self.__max_x = max_x + + if min_y is not None and (self.__min_y is None or self.__min_y > min_y): + self.__min_y = min_y + + if max_y is not None and (self.__max_y is None or self.__max_y < max_y): + self.__max_y = max_y + + + + @pyqtSlot(result=str) + def name(self): + return self.__name + + @pyqtSlot(result="QVariantList") + def xValues(self): + return self.__x_values + + @pyqtSlot(result="QVariantList") + def yValues(self): + return self.__y_values + + @pyqtSlot(result="QVariantList") + def stdValues(self): + return self.__std_values + + @pyqtSlot(result=bool) + def isContinuous(self): + return self.__is_continuous + + @pyqtSlot(result=float) + def minX(self): + return self.__min_x + + @pyqtSlot(result=float) + def maxX(self): + return self.__max_x + + @pyqtSlot(result=float) + def minY(self): + return self.__min_y + + @pyqtSlot(result=float) + def maxY(self): + return self.__max_y + + @pyqtSlot(result=bool) + def isValid(self): + return self.hasBoundaries() and self.hasData() + + @pyqtSlot(result=bool) + def hasBoundaries(self): + return self.__min_x is not None and self.__max_x is not None and self.__min_y is not None and self.__max_y is not None + + @pyqtSlot(result=bool) + def hasData(self): + return self.__has_data diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data.py new file mode 100644 index 0000000000..09c25c9168 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data.py @@ -0,0 +1,195 @@ +from PyQt4.QtCore import QObject, pyqtSlot, QString +from ert_gui.tools.plot.data import HistogramPlotDataFactory, HistogramPlotData, ObservationPlotData, RefcasePlotData, EnsemblePlotData + + +class PlotData(QObject): + def __init__(self, name, parent=None): + QObject.__init__(self, parent) + + self.__name = name + + #: :type: ObservationPlotData + self.__observation_data = None + #: :type: RefcasePlotData + self.__refcase_data = None + #: :type: EnsemblePlotData + self.__ensemble_data = {} + + self.__user_data = {} + + #: :type: HistogramPlotDataFactory + self.__histogram_factory = None + + self.__unit_x = "Unknown" + self.__unit_y = "Unknown" + + self.__min_x = None + self.__max_x = None + self.__min_y = None + self.__max_y = None + + self.__use_log_scale = False + + self.__case_list = [] + + + def setObservationData(self, observation_data): + if observation_data.isValid(): + observation_data.setParent(self) + self.__observation_data = observation_data + self.updateBoundaries(observation_data.minX(), observation_data.maxX(), observation_data.minY(), observation_data.maxY()) + + + def setRefcaseData(self, refcase_data): + refcase_data.setParent(self) + self.__refcase_data = refcase_data + self.updateBoundaries(refcase_data.minX(), refcase_data.maxX(), refcase_data.minY(), refcase_data.maxY()) + + def setHistogramFactory(self, histogram_factory): + assert isinstance(histogram_factory, HistogramPlotDataFactory) + self.__histogram_factory = histogram_factory + + def setUnitX(self, unit): + self.__unit_x = unit + + def setUnitY(self, unit): + self.__unit_y = unit + + def addEnsembleData(self, ensemble_data): + if ensemble_data.isValid(): + ensemble_data.setParent(self) + case_name = ensemble_data.caseName() + self.__case_list.append(case_name) + self.__ensemble_data[case_name] = ensemble_data + self.updateBoundaries(ensemble_data.minX(), ensemble_data.maxX(), ensemble_data.minY(), ensemble_data.maxY()) + + def setUserData(self, name, data): + data.setParent(self) + self.__user_data[name] = data + + def updateBoundaries(self, min_x, max_x, min_y, max_y): + if min_x is not None and (self.__min_x is None or self.__min_x > min_x): + self.__min_x = min_x + + if max_x is not None and (self.__max_x is None or self.__max_x < max_x): + self.__max_x = max_x + + if min_y is not None and (self.__min_y is None or self.__min_y > min_y): + self.__min_y = min_y + + if max_y is not None and (self.__max_y is None or self.__max_y < max_y): + self.__max_y = max_y + + def setShouldUseLogScale(self, use_log_scale): + self.__use_log_scale = use_log_scale + + @pyqtSlot(result=str) + def name(self): + """ @rtype: str """ + return self.__name + + @pyqtSlot(result=str) + def unitX(self): + """ @rtype: str """ + return self.__unit_x + + @pyqtSlot(result=str) + def unitY(self): + """ @rtype: str """ + return self.__unit_y + + @pyqtSlot(result=QObject) + def observationData(self): + """ @rtype: ObservationPlotData """ + return self.__observation_data + + @pyqtSlot(result=bool) + def hasObservationData(self): + """ @rtype: bool """ + return self.__observation_data is not None and self.__observation_data.isValid() + + @pyqtSlot(result=QObject) + def refcaseData(self): + """ @rtype: RefcasePlotData """ + return self.__refcase_data + + @pyqtSlot(result=bool) + def hasRefcaseData(self): + """ @rtype: bool """ + return self.__refcase_data is not None and self.__refcase_data.isValid() + + @pyqtSlot(QString, result=QObject) + def ensembleData(self, case_name): + """ @rtype: EnsemblePlotData """ + return self.__ensemble_data[str(case_name)] + + @pyqtSlot(result=bool) + def hasEnsembleData(self): + """ @rtype: bool """ + return len(self.__ensemble_data.keys()) > 0 + + @pyqtSlot(QString, result=bool) + def hasEnsembleDataForCase(self, case_name): + """ @rtype: bool """ + return str(case_name) in self.__ensemble_data + + @pyqtSlot(QString, result=bool) + def hasUserData(self, name): + """ @rtype: bool """ + return str(name) in self.__user_data + + @pyqtSlot(QString, result=int) + def realizationCount(self, case): + """ @rtype: int """ + return self.__ensemble_data[str(case)].realizationCount() + + @pyqtSlot(result=bool) + def hasHistogram(self): + """ @rtype: bool """ + return self.__histogram_factory is not None + + @pyqtSlot(result=float) + def minX(self): + return self.__min_x + + @pyqtSlot(result=float) + def maxX(self): + return self.__max_x + + @pyqtSlot(result=float) + def minY(self): + return self.__min_y + + @pyqtSlot(result=float) + def maxY(self): + return self.__max_y + + @pyqtSlot(result=bool) + def isValid(self): + return self.hasBoundaries() and (self.hasObservationData() or self.hasRefcaseData() or self.hasEnsembleData() or self.hasHistogram()) + + @pyqtSlot(result=bool) + def hasBoundaries(self): + return self.__min_x is not None and self.__max_x is not None and self.__min_y is not None and self.__max_y is not None + + @pyqtSlot(result="QStringList") + def caseList(self): + return self.__case_list + + @pyqtSlot(result=bool) + def shouldUseLogScale(self): + return self.__use_log_scale + + @pyqtSlot(int, result=QObject) + def histogramData(self, report_step_time): + if self.__histogram_factory is not None: + data = self.__histogram_factory.getHistogramData(report_step_time) + data.setParent(self) + + return data + return None + + @pyqtSlot("QString", result=QObject) + def getUserData(self, name): + return self.__user_data[str(name)] + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data_fetcher.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data_fetcher.py new file mode 100644 index 0000000000..d0be283efd --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/plot_data_fetcher.py @@ -0,0 +1,232 @@ +from ert.enkf.plot import EnsembleDataFetcher, ObservationDataFetcher, RefcaseDataFetcher, BlockObservationDataFetcher, EnsembleGenKWFetcher, EnsembleGenDataFetcher, ObservationGenDataFetcher +from ert.enkf.plot import EnsembleBlockDataFetcher, PcaDataFetcher +from ert_gui.models.connectors.plot import DataTypeKeysModel +from ert_gui.tools.plot.data import PlotData, ObservationPlotData, EnsemblePlotData, RefcasePlotData, HistogramPlotDataFactory, ReportStepLessHistogramPlotDataFactory +from ert_gui.models import ErtConnector + + +class PlotDataFetcher(ErtConnector): + + def getPlotDataForKeyAndCases(self, key, cases): + observation_data_fetcher = ObservationDataFetcher(self.ert()) + block_observation_data_fetcher = BlockObservationDataFetcher(self.ert()) + gen_kw_fetcher = EnsembleGenKWFetcher(self.ert()) + gen_data_fetcher = EnsembleGenDataFetcher(self.ert()) + + if self.isBlockObservationKey(key): + return self.fetchBlockObservationData(block_observation_data_fetcher, key, cases) + + elif self.isSummaryKey(key): + return self.fetchSummaryData(observation_data_fetcher, key, cases) + + elif self.isGenKWKey(key): + return self.fetchGenKWData(gen_kw_fetcher, key, cases) + + elif self.isGenDataKey(key): + return self.fetchGenData(gen_data_fetcher, key, cases) + + elif self.isPcaDataKey(key): + plot_data = PlotData(key) + pca_plot_data = self.fetchPcaData(key, cases) + plot_data.setUserData("PCA", pca_plot_data) + return plot_data + + else: + raise NotImplementedError("Key %s not supported." % key) + + + def isSummaryKey(self, key): + ensemble_data_fetcher = ObservationDataFetcher(self.ert()) + return ensemble_data_fetcher.supportsKey(key) + + + def isBlockObservationKey(self, key): + block_observation_data_fetcher = BlockObservationDataFetcher(self.ert()) + return block_observation_data_fetcher.supportsKey(key) + + + def isGenKWKey(self, key): + gen_kw_fetcher = EnsembleGenKWFetcher(self.ert()) + return gen_kw_fetcher.supportsKey(key) + + + def isGenDataKey(self, key): + obs_gen_data_fetcher = ObservationGenDataFetcher(self.ert()) + return obs_gen_data_fetcher.supportsKey(key) + + + def isPcaDataKey(self, key): + pca_data_fetcher = PcaDataFetcher(self.ert()) + return pca_data_fetcher.supportsKey(key) or DataTypeKeysModel().isCustomPcaKey(key) + + def isCustomPcaDataKey(self, key): + return DataTypeKeysModel().isCustomPcaKey(key) + + def dataTypeKeySupportsReportSteps(self, key): + return self.isSummaryKey(key) + + def fetchGenData(self, gen_data_fetcher, key, cases): + plot_data = PlotData(key) + + gen_data_observation_fetcher = ObservationGenDataFetcher(self.ert()) + + if gen_data_observation_fetcher.hasData(key): + self.addObservationData(plot_data, key, gen_data_observation_fetcher) + self.addEnsembleData(plot_data, key, cases, gen_data_fetcher) + self.addPcaData(plot_data, key, cases) + + return plot_data + + + def fetchGenKWData(self, gen_kw_fetcher, key, cases): + plot_data = PlotData(key) + + histogram_factory = ReportStepLessHistogramPlotDataFactory(key) + self.addEnsembleData(plot_data, key, cases, gen_kw_fetcher, histogram_factory) + plot_data.setHistogramFactory(histogram_factory) + + return plot_data + + + def fetchBlockObservationData(self, block_observation_data_fetcher, key, cases): + plot_data = PlotData(key) + + plot_data.setUnitY(self.ert().eclConfig().getDepthUnit()) + plot_data.setUnitX(self.ert().eclConfig().getPressureUnit()) + + if block_observation_data_fetcher.hasData(key): + block_observation_data_fetcher.setSelectedReportStepIndex(0) + self.addObservationData(plot_data, key, block_observation_data_fetcher) + + ensemble_block_data_fetcher = EnsembleBlockDataFetcher(self.ert()) + ensemble_block_data_fetcher.setSelectedReportStepIndex(0) + self.addEnsembleData(plot_data, key, cases, ensemble_block_data_fetcher) + + self.addPcaData(plot_data, key, cases) + + return plot_data + + + def fetchSummaryData(self, observation_data_fetcher, key, cases): + plot_data = PlotData(key) + + histogram_factory = HistogramPlotDataFactory(key) + refcase_fetcher = RefcaseDataFetcher(self.ert()) + + self.addObservationData(plot_data, key, observation_data_fetcher, histogram_factory) + + self.addRefcaseData(plot_data, key, refcase_fetcher, histogram_factory) + + self.addEnsembleData(plot_data, key, cases, EnsembleDataFetcher(self.ert()), histogram_factory) + + self.addPcaData(plot_data, key, cases) + + if refcase_fetcher.hasRefcase(): + unit = refcase_fetcher.getRefCase().unit(key) + if unit != "": + plot_data.setUnitY(unit) + + plot_data.setHistogramFactory(histogram_factory) + + return plot_data + + + def addEnsembleData(self, plot_data, key, cases, fetcher, histogram_factory=None): + for case in cases: + ensemble_data = fetcher.fetchData(key, case) + + if "use_log_scale" in ensemble_data: + plot_data.setShouldUseLogScale(ensemble_data["use_log_scale"]) + + if len(ensemble_data) > 0: + ensemble_plot_data = EnsemblePlotData(key, case) + + if "min_y_values" in ensemble_data: + min_values = ensemble_data["min_y_values"] + elif "min_x_values" in ensemble_data: + min_values = ensemble_data["min_x_values"] + else: + min_values = [] + + + if "max_y_values" in ensemble_data: + max_values = ensemble_data["max_y_values"] + elif "max_x_values" in ensemble_data: + max_values = ensemble_data["max_x_values"] + else: + max_values = [] + + ensemble_plot_data.setEnsembleData(ensemble_data["x"], ensemble_data["y"], min_values, max_values) + ensemble_plot_data.updateBoundaries(ensemble_data["min_x"], ensemble_data["max_x"], ensemble_data["min_y"], ensemble_data["max_y"]) + plot_data.addEnsembleData(ensemble_plot_data) + + if histogram_factory is not None: + histogram_factory.addEnsembleData(case, ensemble_data["x"], ensemble_data["y"], ensemble_data["min_y"], ensemble_data["max_y"]) + + + def addObservationData(self, plot_data, key, fetcher, histogram_factory=None): + observation_data = fetcher.fetchData(key) + + observation_plot_data = ObservationPlotData(key) + observation_plot_data.setObservationData(observation_data["x"], observation_data["y"], observation_data["std"], observation_data["continuous"]) + observation_plot_data.updateBoundaries(observation_data["min_x"], observation_data["max_x"], observation_data["min_y"], observation_data["max_y"]) + + plot_data.setObservationData(observation_plot_data) + + if histogram_factory is not None: + histogram_factory.setObservations(observation_data["x"], observation_data["y"], observation_data["std"], observation_data["min_y"], observation_data["max_y"]) + + + def addRefcaseData(self, plot_data, key, fetcher, histogram_factory=None): + refcase_data = fetcher.fetchData(key) + refcase_plot_data = RefcasePlotData(key) + refcase_plot_data.setRefcaseData(refcase_data["x"], refcase_data["y"]) + refcase_plot_data.updateBoundaries(refcase_data["min_x"], refcase_data["max_x"], refcase_data["min_y"], refcase_data["max_y"]) + plot_data.setRefcaseData(refcase_plot_data) + + if histogram_factory is not None: + histogram_factory.setRefcase(refcase_data["x"], refcase_data["y"], refcase_data["min_y"], refcase_data["max_y"]) + + + def addPcaData(self, plot_data, key, cases): + if plot_data.hasObservationData() and plot_data.hasEnsembleData(): + plot_data.setUserData("PCA", self.fetchPcaData(key, cases)) + else: + plot_data.setUserData("PCA", PlotData("No ensemble data available for %s" % key)) + + + def fetchPcaData(self, key, cases): + """ @rtype: PlotData """ + if key.startswith("PCA:"): + pca_name = key + else: + pca_name ="PCA:%s" % key + + pca_data_fetcher = PcaDataFetcher(self.ert()) + pca_plot_data = PlotData(pca_name) + + if DataTypeKeysModel().isCustomPcaKey(key): + obs_keys = DataTypeKeysModel().getCustomPcaKeyObsKeys(key) + else: + obs_keys = pca_data_fetcher.getObsKeys(key) + + for case in cases: + + pca_data = pca_data_fetcher.fetchData(obs_keys, case) + + if pca_data["x"] is not None: + + if not pca_plot_data.hasObservationData(): + pca_observation_plot_data = ObservationPlotData(pca_name) + pca_observation_plot_data.setObservationData(pca_data["x"], pca_data["obs_y"], [0.0 for x in pca_data["x"]], False) + pca_observation_plot_data.updateBoundaries(pca_data["min_x"], pca_data["max_x"], pca_data["min_y"], pca_data["max_y"]) + pca_plot_data.setObservationData(pca_observation_plot_data) + + pca_ensemble_plot_data = EnsemblePlotData(key, case) + pca_ensemble_plot_data.setEnsembleData(pca_data["x"], pca_data["y"], [], []) + pca_ensemble_plot_data.updateBoundaries(pca_data["min_x"], pca_data["max_x"], pca_data["min_y"], pca_data["max_y"]) + pca_plot_data.addEnsembleData(pca_ensemble_plot_data) + + return pca_plot_data + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/refcase_plot_data.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/refcase_plot_data.py new file mode 100644 index 0000000000..2375f2b51d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data/refcase_plot_data.py @@ -0,0 +1,89 @@ +from PyQt4.QtCore import QObject, pyqtSlot + + +class RefcasePlotData(QObject): + def __init__(self, name, parent=None): + QObject.__init__(self, parent) + + self.__name = name + + self.__x_values = [] + self.__y_values = [] + self.__has_data = False + + self.__min_x = None + self.__max_x = None + self.__min_y = None + self.__max_y = None + + + + def setRefcaseData(self, x_values, y_values): + if x_values is not None and y_values is not None: + self.__x_values = x_values + self.__y_values = y_values + self.__has_data = True + + + def updateBoundaries(self, min_x, max_x, min_y, max_y): + if min_x is not None and (self.__min_x is None or self.__min_x > min_x): + self.__min_x = min_x + + if max_x is not None and (self.__max_x is None or self.__max_x < max_x): + self.__max_x = max_x + + if min_y is not None and (self.__min_y is None or self.__min_y > min_y): + self.__min_y = min_y + + if max_y is not None and (self.__max_y is None or self.__max_y < max_y): + self.__max_y = max_y + + + + @pyqtSlot(result=str) + def name(self): + return self.__name + + + + @pyqtSlot(result="QVariantList") + def xValues(self): + return self.__x_values + + @pyqtSlot(result="QVariantList") + def yValues(self): + return self.__y_values + + + @pyqtSlot(result=float) + def minX(self): + return self.__min_x + + @pyqtSlot(result=float) + def maxX(self): + return self.__max_x + + @pyqtSlot(result=float) + def minY(self): + return self.__min_y + + @pyqtSlot(result=float) + def maxY(self): + return self.__max_y + + + @pyqtSlot(result=bool) + def isValid(self): + return self.hasBoundaries() and self.hasData() + + @pyqtSlot(result=bool) + def hasBoundaries(self): + return self.__min_x is not None and self.__max_x is not None and self.__min_y is not None and self.__max_y is not None + + + @pyqtSlot(result=bool) + def hasData(self): + return self.__has_data + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_list_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_list_model.py index 49028bb6ce..417a610ef1 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_list_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_list_model.py @@ -7,10 +7,13 @@ class DataTypeKeysListModel(QAbstractItemModel): DEFAULT_DATA_TYPE = QColor(255, 255, 255) HAS_OBSERVATIONS = QColor(237, 218, 116) + GROUP_ITEM = QColor(64, 64, 64) def __init__(self): QAbstractItemModel.__init__(self) self.__icon = util.resourceIcon("ide/small/bullet_star") + self.__items = DataTypeKeysModel().getAllKeys() + def index(self, row, column, parent=None, *args, **kwargs): return self.createIndex(row, column, parent) @@ -19,8 +22,7 @@ def parent(self, index=None): return QModelIndex() def rowCount(self, parent=None, *args, **kwargs): - items = DataTypeKeysModel().getList() - return len(items) + return len(self.__items) def columnCount(self, QModelIndex_parent=None, *args, **kwargs): return 1 @@ -29,7 +31,7 @@ def data(self, index, role=None): assert isinstance(index, QModelIndex) if index.isValid(): - items = DataTypeKeysModel().getList() + items = self.__items row = index.row() item = items[row] @@ -46,13 +48,25 @@ def itemAt(self, index): if index.isValid(): row = index.row() - return DataTypeKeysModel().getList()[row] + return self.__items[row] return None + def isSummaryKey(self, key): + return DataTypeKeysModel().isSummaryKey(str(key)) + + def isBlockKey(self, key): + return DataTypeKeysModel().isBlockKey(str(key)) + + def isGenKWKey(self, key): + return DataTypeKeysModel().isGenKWKey(str(key)) + def isGenDataKey(self, key): + return DataTypeKeysModel().isGenDataKey(str(key)) + def isCustomPcaKey(self, key): + return DataTypeKeysModel().isCustomPcaKey(str(key)) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_widget.py index 6e3a002658..af3c1fc743 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_widget.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_keys_widget.py @@ -1,7 +1,9 @@ from PyQt4.QtCore import pyqtSignal -from PyQt4.QtGui import QWidget, QVBoxLayout, QListView, QColor -from ert_gui.tools.plot import DataTypeKeysListModel +from PyQt4.QtGui import QWidget, QVBoxLayout, QListView, QHBoxLayout, QToolButton +from ert_gui.tools.plot import DataTypeKeysListModel, DataTypeProxyModel, FilterPopup +from ert_gui.widgets import util from ert_gui.widgets.legend import Legend +from ert_gui.widgets.search_box import SearchBox class DataTypeKeysWidget(QWidget): @@ -10,33 +12,67 @@ class DataTypeKeysWidget(QWidget): def __init__(self): QWidget.__init__(self) + self.__filter_popup = FilterPopup(self) + self.__filter_popup.filterSettingsChanged.connect(self.onItemChanged) + layout = QVBoxLayout() self.model = DataTypeKeysListModel() + self.filter_model = DataTypeProxyModel(self.model) + + filter_layout = QHBoxLayout() + + self.search_box = SearchBox() + self.search_box.filterChanged.connect(self.setSearchString) + filter_layout.addWidget(self.search_box) + + filter_popup_button = QToolButton() + filter_popup_button.setIcon(util.resourceIcon("ide/cog_edit.png")) + filter_popup_button.clicked.connect(self.showFilterPopup) + filter_layout.addWidget(filter_popup_button) + layout.addLayout(filter_layout) + self.data_type_keys_widget = QListView() - self.data_type_keys_widget.setModel(self.model) + self.data_type_keys_widget.setModel(self.filter_model) self.data_type_keys_widget.selectionModel().selectionChanged.connect(self.itemSelected) + layout.addSpacing(15) layout.addWidget(self.data_type_keys_widget, 2) + layout.addStretch() - layout.addWidget(Legend("Default types", DataTypeKeysListModel.DEFAULT_DATA_TYPE)) + # layout.addWidget(Legend("Default types", DataTypeKeysListModel.DEFAULT_DATA_TYPE)) layout.addWidget(Legend("Observations available", DataTypeKeysListModel.HAS_OBSERVATIONS)) self.setLayout(layout) + def onItemChanged(self, item): + self.filter_model.setShowBlockKeys(item["block"]) + self.filter_model.setShowSummaryKeys(item["summary"]) + self.filter_model.setShowGenKWKeys(item["gen_kw"]) + self.filter_model.setShowGenDataKeys(item["gen_data"]) + self.filter_model.setShowCustomPcaKeys(item["custom_pca"]) + def itemSelected(self): - self.dataTypeKeySelected.emit(self.getSelectedItem()) + selected_item = self.getSelectedItem() + if selected_item is not None: + self.dataTypeKeySelected.emit(selected_item) def getSelectedItem(self): """ @rtype: str """ index = self.data_type_keys_widget.currentIndex() - item = self.model.itemAt(index) + source_index = self.filter_model.mapToSource(index) + item = self.model.itemAt(source_index) return item def selectDefault(self): - self.data_type_keys_widget.setCurrentIndex(self.model.index(0, 0)) + self.data_type_keys_widget.setCurrentIndex(self.filter_model.index(0, 0)) + + def setSearchString(self, filter): + self.filter_model.setFilterFixedString(filter) + def showFilterPopup(self): + self.__filter_popup.show() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_proxy_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_proxy_model.py new file mode 100644 index 0000000000..9d67fb51b1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/data_type_proxy_model.py @@ -0,0 +1,84 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'data_type_proxy_model.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QSortFilterProxyModel +from ert_gui.tools.plot import DataTypeKeysListModel + + +class DataTypeProxyModel(QSortFilterProxyModel): + + def __init__(self, model , parent=None): + QSortFilterProxyModel.__init__(self, parent) + self.__show_summary_keys = True + self.__show_block_keys = True + self.__show_gen_kw_keys = True + self.__show_gen_data_keys = True + self.__show_custom_pca_keys = True + + self.setFilterCaseSensitivity(Qt.CaseInsensitive) + self.setSourceModel(model) + + def filterAcceptsRow(self, index, q_model_index): + show = QSortFilterProxyModel.filterAcceptsRow(self, index, q_model_index) + + if show: + source_model = self.sourceModel() + source_index = source_model.index(index, 0, q_model_index) + key = source_model.itemAt(source_index) + + if not self.__show_summary_keys and source_model.isSummaryKey(key): + show = False + + elif not self.__show_block_keys and source_model.isBlockKey(key): + show = False + + elif not self.__show_gen_kw_keys and source_model.isGenKWKey(key): + show = False + + elif not self.__show_gen_data_keys and source_model.isGenDataKey(key): + show = False + + elif not self.__show_custom_pca_keys and source_model.isCustomPcaKey(key): + show = False + + + return show + + def sourceModel(self): + """ @rtype: DataTypeKeysListModel """ + return QSortFilterProxyModel.sourceModel(self) + + def setShowSummaryKeys(self, visible): + self.__show_summary_keys = visible + self.invalidateFilter() + + def setShowBlockKeys(self, visible): + self.__show_block_keys = visible + self.invalidateFilter() + + def setShowGenKWKeys(self, visible): + self.__show_gen_kw_keys = visible + self.invalidateFilter() + + def setShowGenDataKeys(self, visible): + self.__show_gen_data_keys = visible + self.invalidateFilter() + + def setShowCustomPcaKeys(self, visible): + self.__show_custom_pca_keys = visible + self.invalidateFilter() + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/export_plot.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/export_plot.py new file mode 100644 index 0000000000..c9ce40b24a --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/export_plot.py @@ -0,0 +1,150 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'export_plot.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import os +from PyQt4.QtCore import QSize, QSizeF, Qt, QStringList, QFileInfo +from PyQt4.QtGui import QPrinter, QImage, QPainter, QFileDialog, QApplication, QCursor + +from ert_gui.models.connectors.plot.plot_settings import PlotSettingsModel +from ert_gui.tools.plot.plot_bridge import PlotWebPage, PlotBridge +from ert_gui.tools.plot.plot_panel import PlotPanel + + +class ExportPlot(object): + def __init__(self, active_plot_panel, settings, custom_settings, path=None): + super(ExportPlot, self).__init__() + assert isinstance(active_plot_panel, PlotPanel) + self.__active_plot_panel = active_plot_panel + self.__settings = settings + self.__custom_settings = custom_settings + self.__bridge = None + """:type: PlotBridge """ + self.__plot_bridge_org = active_plot_panel.getPlotBridge() + self.__width = self.__plot_bridge_org.getPrintWidth() + self.__height = self.__plot_bridge_org.getPrintHeight() + 20 + self.__file_name = None + self.__selected_file_type = None + self.__path = path + + + def export(self): + if self.__path is not None: + default_export_path = self.__path + else: + default_export_path = PlotSettingsModel().getDefaultPlotPath() + + dialog = QFileDialog(self.__active_plot_panel) + dialog.setFileMode(QFileDialog.AnyFile) + #dialog.setNameFilter("Image (*.png);; PDF (*.pdf)") + dialog.setNameFilter("Image (*.png)") + dialog.setWindowTitle("Export plot") + dialog.setDirectory(default_export_path) + dialog.setOption(QFileDialog.DontUseNativeDialog, True) + dialog.setLabelText(QFileDialog.FileType, "Select file type: ") + dialog.setAcceptMode(QFileDialog.AcceptSave) + dialog.selectFile(self.getDefaultFileName()) + + if dialog.exec_(): + result = dialog.selectedFiles() + assert isinstance(result, QStringList) + if len(result) == 1: + file_info = QFileInfo(result[0]) + self.__file_name = file_info.fileName() + self.__path = file_info.path() + self.__selected_file_type = dialog.selectedNameFilter() + name = self.__active_plot_panel.getName() + url = self.__active_plot_panel.getUrl() + + + web_page = PlotWebPage("export - %s" % name) + web_page.mainFrame().setScrollBarPolicy(Qt.Vertical, Qt.ScrollBarAlwaysOff) + web_page.mainFrame().setScrollBarPolicy(Qt.Horizontal, Qt.ScrollBarAlwaysOff) + web_page.setViewportSize(QSize(self.__width, self.__height)) + self.__bridge = PlotBridge(web_page, url) + self.__bridge.plotReady.connect(self.plotReady) + QApplication.setOverrideCursor(QCursor(Qt.WaitCursor)) + + + def plotReady(self): + data = self.__plot_bridge_org.getPlotData() + self.__bridge.setPlotData(data) + self.__bridge.updatePlotSize(QSize(self.__width, self.__height)) + self.__bridge.setCustomSettings(self.__custom_settings) + + self.__bridge.setReportStepTime(self.__settings["report_step"]) + + x_min = self.__settings["x_min"] + x_max = self.__settings["x_max"] + y_min = self.__settings["y_min"] + y_max = self.__settings["y_max"] + self.__bridge.setScales(x_min, x_max, y_min, y_max) + + self.__bridge.renderingFinished.connect(self.performExport) + + + def performExport(self): + file_name = os.path.join(str(self.__path), str(self.__file_name)) + view = self.__bridge.getPage() + if not self.__file_name.isEmpty(): + if str(self.__selected_file_type) == "PDF (*.pdf)": + if not file_name.endswith(".pdf"): + file_name += ".pdf" + self.exportPDF(view, file_name, self.__width, self.__height) + elif str(self.__selected_file_type) == "Image (*.png)": + if not file_name.endswith(".png"): + file_name += ".png" + self.exportPNG(view, file_name, self.__width, self.__height) + + + def exportPDF(self, view, file_name, width, height): + pdf = QPrinter() + pdf.setOutputFormat(QPrinter.PdfFormat) + pdf.setPrintRange(QPrinter.AllPages) + pdf.setOrientation(QPrinter.Portrait) + pdf.setResolution(QPrinter.HighResolution) + pdf.setPaperSize(QSizeF(width,height),QPrinter.Point) + pdf.setFullPage(True) + pdf.setOutputFileName(file_name) + view.mainFrame().print_(pdf) + + QApplication.restoreOverrideCursor() + + + def exportPNG(self, view, file_name, width, height): + image = QImage(QSize(width, height), QImage.Format_ARGB32_Premultiplied) + paint = QPainter(image) + paint.setRenderHint(QPainter.Antialiasing, True) + paint.setRenderHint(QPainter.HighQualityAntialiasing, True) + paint.setRenderHint(QPainter.TextAntialiasing, True) + paint.setRenderHint(QPainter.SmoothPixmapTransform, True) + view.mainFrame().render(paint) + image.save(file_name) + paint.end() + + QApplication.restoreOverrideCursor() + + + def getDefaultFileName(self): + name = str(self.__plot_bridge_org.getPlotTitle()) + name = name.replace(":"," ") + name = name.replace("@", "-") + type = self.__active_plot_panel.getName() + + name = type + " " + name + ".png" + + return name + + def getCurrentPath(self): + return self.__path \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/filter_popup.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/filter_popup.py new file mode 100644 index 0000000000..20ebbf21d4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/filter_popup.py @@ -0,0 +1,58 @@ +from PyQt4.QtCore import Qt, pyqtSignal, QSize, SIGNAL +from PyQt4.QtGui import QWidget, QFrame, QDialog, QVBoxLayout, QCheckBox, QLabel, QLayout, QCursor, QHBoxLayout, QToolButton +from ert_gui.widgets.util import resourceIcon + + +class FilterPopup(QDialog): + filterSettingsChanged = pyqtSignal(dict) + + def __init__(self, parent=None): + QDialog.__init__(self, parent, Qt.WindowStaysOnTopHint | Qt.X11BypassWindowManagerHint | Qt.FramelessWindowHint) + self.setVisible(False) + + self.filter_items = {} + + layout = QVBoxLayout() + layout.setMargin(0) + frame = QFrame() + frame.setFrameStyle(QFrame.StyledPanel | QFrame.Raised) + layout.addWidget(frame) + + self.__layout = QVBoxLayout() + self.__layout.setSizeConstraint(QLayout.SetFixedSize) + self.__layout.addWidget(QLabel("Filter by data type:")) + + self.addFilterItem("Summary", "summary") + self.addFilterItem("Block", "block") + self.addFilterItem("Gen KW", "gen_kw") + self.addFilterItem("Gen Data", "gen_data") + self.addFilterItem("Custom PCA", "custom_pca") + + frame.setLayout(self.__layout) + + self.setLayout(layout) + self.adjustSize() + + + def addFilterItem(self, name, id, value=True): + self.filter_items[id] = value + + check_box = QCheckBox(name) + check_box.setChecked(value) + + def toggleItem(checked): + self.filter_items[id] = checked + self.filterSettingsChanged.emit(self.filter_items) + + check_box.toggled.connect(toggleItem) + + self.__layout.addWidget(check_box) + + def leaveEvent(self, QEvent): + QWidget.leaveEvent(self, QEvent) + self.hide() + + def show(self): + QWidget.show(self) + p = QCursor().pos() + self.move(p.x(), p.y()) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_bridge.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_bridge.py new file mode 100644 index 0000000000..8631c620fe --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_bridge.py @@ -0,0 +1,224 @@ +import json +import os +from PyQt4.QtCore import QObject, pyqtSlot, pyqtSignal, QUrl, QVariant +from PyQt4.QtWebKit import QWebPage +from ert.util import CTime +from ert_gui.tools.plot.data import PlotData + +class PlotWebPage(QWebPage): + def __init__(self, name): + QWebPage.__init__(self) + self.name = name + + def javaScriptConsoleMessage(self, message, line_number, source_id): + print("[%s] Source: %s at line: %d -> %s" % (self.name, source_id, line_number, message)) + + +class PlotBridge(QObject): + plotReady = pyqtSignal() + renderingFinished = pyqtSignal() + + def __init__(self, web_page, plot_url): + QObject.__init__(self) + assert isinstance(web_page, QWebPage) + + self.__web_page = web_page + self.__ready = False + self.__html_ready = False + self.__data = PlotData("invalid", parent=self) + self.__size = None + self.__temporary_data_object = None + + self.applyContextObject() + + root_path = os.getenv("ERT_SHARE_PATH") + path = os.path.join(root_path, plot_url) + self.__web_page.mainFrame().load(QUrl("file://%s" % path)) + self.__web_page.loadFinished.connect(self.loadFinished) + + + def applyContextObject(self): + self.__web_page.mainFrame().addToJavaScriptWindowObject("plot_data_source", self) + + def updatePlotSize(self, size): + self.__size = size + if self.isReady(): + self.__web_page.mainFrame().evaluateJavaScript("setSize(%d,%d);" % (size.width(), size.height())) + self.renderNow() + + def supportsPlotProperties(self, time=False, value=False, depth=False, index=False, histogram=False, pca=False): + time = str(time).lower() + value = str(value).lower() + depth = str(depth).lower() + index = str(index).lower() + histogram = str(histogram).lower() + pca = str(pca).lower() + return self.__web_page.mainFrame().evaluateJavaScript("supportsPlotProperties(%s,%s,%s,%s,%s,%s);" % (time, value, depth, index, histogram, pca)).toBool() + + def setPlotData(self, data): + self.__data = data + self.__web_page.mainFrame().evaluateJavaScript("updatePlot();") + + def setReportStepTime(self, report_step_time): + if report_step_time is None: + report_step_time = "null" + + if isinstance(report_step_time, CTime): + report_step_time = report_step_time.ctime() + + self.__web_page.mainFrame().evaluateJavaScript("setReportStepTime(%s);" % report_step_time) + + + def setScales(self, x_min, x_max, y_min, y_max): + if x_min is None: + x_min = "null" + + if x_max is None: + x_max = "null" + + if y_min is None: + y_min = "null" + + if y_max is None: + y_max = "null" + + if isinstance(x_min, CTime): + x_min = x_min.ctime() + + if isinstance(x_max, CTime): + x_max = x_max.ctime() + + if isinstance(y_min, CTime): + y_min = y_min.ctime() + + if isinstance(y_max, CTime): + y_max = y_max.ctime() + + scales = (x_min, x_max, y_min, y_max) + self.__web_page.mainFrame().evaluateJavaScript("setScales(%s,%s,%s,%s);" % scales) + + @pyqtSlot(result=QObject) + def getPlotData(self): + return self.__data + + + @pyqtSlot() + def htmlInitialized(self): + # print("[%s] Initialized!" % self.__name) + self.__html_ready = True + self.checkStatus() + + def loadFinished(self, ok): + self.__ready = True + self.checkStatus() + + def checkStatus(self): + if self.__ready and self.__html_ready: + # print("[%s] Ready!" % self.__name) + self.plotReady.emit() + if self.__size is not None: + self.updatePlotSize(self.__size) + + def isReady(self): + return self.__ready and self.__html_ready + + def getPrintWidth(self): + return self.__web_page.mainFrame().evaluateJavaScript("getPrintWidth();").toInt()[0] + + def getPrintHeight(self): + return self.__web_page.mainFrame().evaluateJavaScript("getPrintHeight();").toInt()[0] + + def getPage(self): + return self.__web_page + + def setCustomSettings(self, settings): + json_settings = json.dumps(settings) + self.__web_page.mainFrame().evaluateJavaScript("setCustomSettings(%s);" % json_settings) + + def renderNow(self): + self.__web_page.mainFrame().evaluateJavaScript("renderNow()") + + + def getPlotTitle(self): + return self.__web_page.mainFrame().evaluateJavaScript("getPlotTitle();" ).toString() + + + def xAxisType(self): + """ @rtype: str """ + axis_type = self.__web_page.mainFrame().evaluateJavaScript("xAxisType();") + + if axis_type.isNull(): + return None + + return str(axis_type.toString()) + + + def yAxisType(self): + """ @rtype: str """ + axis_type = self.__web_page.mainFrame().evaluateJavaScript("yAxisType();") + + if axis_type.isNull(): + return None + + return str(axis_type.toString()) + + + def isReportStepCapable(self): + """ @rtype: bool """ + return self.__web_page.mainFrame().evaluateJavaScript("isReportStepCapable();" ).toBool() + + + @pyqtSlot(result=QObject) + def getTemporaryData(self): + return self.__temporary_data_object + + + def getXScales(self, data): + """ @rtype: (float, float) """ + self.__temporary_data_object = data + x_min = self.__web_page.mainFrame().evaluateJavaScript("getXMin();") + x_max = self.__web_page.mainFrame().evaluateJavaScript("getXMax();") + + if x_min.isNull(): + x_min = None + elif x_min.typeName() == "double": + x_min = x_min.toDouble()[0] + else: + raise TypeError("Unknown type %s for x_min" % x_min.typeName()) + + if x_max.isNull(): + x_max = None + elif x_max.typeName() == "double": + x_max = x_max.toDouble()[0] + else: + raise TypeError("Unknown type %s for x_max" % x_max.typeName()) + + return x_min, x_max + + + def getYScales(self, data): + """ @rtype: (float, float) """ + self.__temporary_data_object = data + y_min = self.__web_page.mainFrame().evaluateJavaScript("getYMin();") + y_max = self.__web_page.mainFrame().evaluateJavaScript("getYMax();") + + if y_min.isNull(): + y_min = None + elif y_min.typeName() == "double": + y_min = y_min.toDouble()[0] + else: + raise TypeError("Unknown type %s for y_min" % y_min.typeName()) + + if y_max.isNull(): + y_max = None + elif y_max.typeName() == "double": + y_max = y_max.toDouble()[0] + else: + raise TypeError("Unknown type %s for y_max" % y_max.typeName()) + + return y_min, y_max + + + + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_model.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_model.py index e98d8d671f..e12fed8f9e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_model.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_model.py @@ -6,10 +6,7 @@ class PlotCaseModel(QAbstractItemModel): def __init__(self): QAbstractItemModel.__init__(self) - CaseList().observable().attach(CaseList.LIST_CHANGED_EVENT, self.updateItems) self.__data = None - self.destroyed.connect(self.cleanup) - def index(self, row, column, parent=None, *args, **kwargs): return self.createIndex(row, column, parent) @@ -50,19 +47,10 @@ def itemAt(self, index): def getAllItems(self): if self.__data is None: - self.updateItems() + self.__data = CaseList().getAllCasesWithData() return self.__data - def updateItems(self): - self.beginResetModel() - self.__data = CaseList().getAllCasesWithData() - self.endResetModel() - - def cleanup(self): - CaseList().observable().detach(CaseList.LIST_CHANGED_EVENT, self.updateItems) - - def __iter__(self): cur = 0 while cur < self.rowCount(): diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_selection_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_selection_widget.py index cdd21c67b8..4751cbbf1a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_selection_widget.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_case_selection_widget.py @@ -1,4 +1,4 @@ -from PyQt4.QtCore import pyqtSignal, QSignalMapper +from PyQt4.QtCore import pyqtSignal, QSignalMapper, Qt from PyQt4.QtGui import QWidget, QVBoxLayout, QHBoxLayout, QToolButton, QComboBox, QPushButton from ert_gui.tools.plot import PlotCaseModel from ert_gui.widgets import util @@ -20,11 +20,14 @@ def __init__(self, current_case): layout = QVBoxLayout() add_button_layout = QHBoxLayout() - button = QPushButton(util.resourceIcon("ide/small/add"), "Add case to plot") - button.clicked.connect(self.addCaseSelector) + self.__add_case_button = QToolButton() + self.__add_case_button.setToolButtonStyle(Qt.ToolButtonTextBesideIcon) + self.__add_case_button.setText("Add case to plot") + self.__add_case_button.setIcon(util.resourceIcon("ide/small/add")) + self.__add_case_button.clicked.connect(self.addCaseSelector) add_button_layout.addStretch() - add_button_layout.addWidget(button) + add_button_layout.addWidget(self.__add_case_button) add_button_layout.addStretch() layout.addLayout(add_button_layout) @@ -41,14 +44,25 @@ def __init__(self, current_case): self.__signal_mapper.mapped[QWidget].connect(self.removeWidget) + def __caseName(self, widget): + """ @rtype: str """ + return str(self.__case_selectors[widget].currentText()) + def getPlotCaseNames(self): - return [str(self.__case_selectors[widget].currentText()) for widget in self.__case_selectors_order] + if self.__model.rowCount() == 0: + return [] + return [self.__caseName(widget) for widget in self.__case_selectors_order] - def addCaseSelector(self, disabled=False, current_case=None): + def checkCaseCount(self): + state = True if len(self.__case_selectors_order) == 5: - return + state = False + + self.__add_case_button.setEnabled(state) + + def addCaseSelector(self, disabled=False, current_case=None): widget = QWidget() layout = QHBoxLayout() @@ -88,6 +102,7 @@ def addCaseSelector(self, disabled=False, current_case=None): self.__case_layout.addWidget(widget) + self.checkCaseCount() self.caseSelectionChanged.emit() @@ -99,3 +114,5 @@ def removeWidget(self, widget): widget.setParent(None) self.caseSelectionChanged.emit() + self.checkCaseCount() + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_metrics_tracker.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_metrics_tracker.py new file mode 100644 index 0000000000..80b4883e35 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_metrics_tracker.py @@ -0,0 +1,84 @@ +class PlotMetricsTracker(object): + def __init__(self): + super(PlotMetricsTracker, self).__init__() + + self.__data_type_key = None + self.__data_type_key_support_report_steps = False + self.__scale_types = {} + + self.__scales = {} + + def addScaleType(self, scale_name, scale_type): + """ + @type scale_name: str + @type scale_type: int or float or CTime + """ + self.__scale_types[scale_name] = scale_type + + + def getType(self, scale_name): + """ + @type scale_name: str + @rtype: int or float or CTime or None + """ + + if scale_name is None: + return None + + if not scale_name in self.__scale_types: + raise KeyError("Scale type with name: '%s' does not exist!" % scale_name) + + return self.__scale_types[scale_name] + + + def __createScaleTracker(self): + scale_tracker = {} + + for scale_name in self.__scale_types.keys(): + scale_tracker[scale_name] = (None, None) + + return scale_tracker + + def setDataTypeKey(self, data_type_key): + """ @type data_type_key: str """ + self.__data_type_key = data_type_key + + if not data_type_key in self.__scales: + self.__scales[data_type_key] = self.__createScaleTracker() + + def getDataTypeKey(self): + """ @rtype: str """ + return self.__data_type_key + + + def setScalesForType(self, scale_name, min_value, max_value): + if scale_name is not None: + if not scale_name in self.__scales[self.__data_type_key]: + raise KeyError("Scale name '%s' not registered!" % scale_name) + + self.__scales[self.__data_type_key][scale_name] = (min_value, max_value) + + + def getScalesForType(self, scale_name): + """ @rtype: tuple of (int, int) or tuple of (float, float) or tuple of (CTime, CTime) """ + scale_tracker = self.__scales[self.__data_type_key] + if not scale_name in scale_tracker: + return None, None + + return scale_tracker[scale_name] + + def setDataTypeKeySupportsReportSteps(self, supports_report_steps): + self.__data_type_key_support_report_steps = supports_report_steps + + def dataTypeSupportsReportStep(self): + return self.__data_type_key_support_report_steps + + def resetScaleType(self, scale_name): + self.setScalesForType(scale_name, None, None) + + def hasScale(self, scale_name): + if scale_name is None: + return True + + scale_tracker = self.__scales[self.__data_type_key] + return not scale_tracker[scale_name] == (None, None) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel.py index c1d30ca8b3..78d16ea506 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel.py @@ -1,17 +1,9 @@ -import json -import os -from PyQt4.QtCore import QUrl, Qt, pyqtSlot, pyqtSignal -from PyQt4.QtGui import QWidget, QGridLayout, QPainter -from PyQt4.QtWebKit import QWebView, QWebPage, QWebSettings +from PyQt4.QtCore import Qt, pyqtSignal +from PyQt4.QtGui import QWidget, QGridLayout, QPainter, QShortcut, QMainWindow +from PyQt4.QtWebKit import QWebView, QWebSettings, QWebInspector - -class PlotWebPage(QWebPage): - def __init__(self, name): - QWebPage.__init__(self) - self.name = name - - def javaScriptConsoleMessage(self, message, line_number, source_id): - print("[%s] Source: %s at line: %d -> %s" % (self.name, source_id, line_number, message)) +from ert_gui.tools.plot import PlotBridge +from ert_gui.tools.plot.plot_bridge import PlotWebPage class PlotWebView(QWebView): @@ -25,84 +17,108 @@ def __init__(self, name): self.settings().setAttribute(QWebSettings.LocalContentCanAccessRemoteUrls, True) self.settings().clearMemoryCaches() + self.__inspector_window = None + + shortcut = QShortcut(self) + shortcut.setKey(Qt.Key_F12) + shortcut.activated.connect(self.toggleInspector) + + + def toggleInspector(self): + if self.__inspector_window is None: + self.settings().setAttribute(QWebSettings.DeveloperExtrasEnabled, True) + web_inspector = QWebInspector() + web_inspector.setPage(self.page()) + + self.__inspector_window = QMainWindow(self) + self.__inspector_window.setCentralWidget(web_inspector) + self.__inspector_window.resize(900, 600) + self.__inspector_window.setVisible(False) + + self.__inspector_window.setVisible(not self.__inspector_window.isVisible()) class PlotPanel(QWidget): plotReady = pyqtSignal() - def __init__(self, name, plot_url): + def __init__(self, name, debug_name, plot_url): QWidget.__init__(self) self.__name = name - self.__ready = False - self.__html_ready = False - self.__data = [] - root_path = os.getenv("ERT_SHARE_PATH") - path = os.path.join(root_path, plot_url) + self.__debug_name = debug_name + self.__plot_url = plot_url layout = QGridLayout() - self.web_view = PlotWebView(name) - self.applyContextObject() - # self.web_view.page().mainFrame().javaScriptWindowObjectCleared.connect(self.applyContextObject) - self.web_view.loadFinished.connect(self.loadFinished) + self.web_view = PlotWebView(debug_name) layout.addWidget(self.web_view) - self.setLayout(layout) - self.web_view.setUrl(QUrl("file://%s" % path)) + self.__plot_is_visible = True + self.__plot_bridge = PlotBridge(self.getWebView().page(), plot_url) + self.__plot_bridge.plotReady.connect(self.plotReady) - @pyqtSlot(result=str) - def getPlotData(self): - return json.dumps(self.__data) + def getName(self): + return self.__name + def getUrl(self): + return self.__plot_url - @pyqtSlot() - def htmlInitialized(self): - # print("[%s] Initialized!" % self.__name) - self.__html_ready = True - self.checkStatus() + def getWebView(self): + return self.web_view + def setSettings(self, settings): + if self.isPlotVisible(): + self.__plot_bridge.setPlotSettings(settings) - def setPlotData(self, data): - self.__data = data - self.web_view.page().mainFrame().evaluateJavaScript("updatePlot();") - - - def applyContextObject(self): - self.web_view.page().mainFrame().addToJavaScriptWindowObject("plot_data_source", self) + def isReady(self): + return self.__plot_bridge.isReady() - def loadFinished(self, ok): - self.__ready = True - self.checkStatus() + def resizeEvent(self, event): + QWidget.resizeEvent(self, event) + if self.isPlotVisible(): + self.__plot_bridge.updatePlotSize(size = self.size()) - def checkStatus(self): - if self.__ready and self.__html_ready: - # print("[%s] Ready!" % self.__name) - self.plotReady.emit() - self.updatePlotSize() + def supportsPlotProperties(self, time=False, value=False, depth=False, index=False, histogram=False, pca=False): + return self.__plot_bridge.supportsPlotProperties(time, value, depth, index, histogram, pca) - def isReady(self): - return self.__ready and self.__html_ready + def isPlotVisible(self): + return self.__plot_is_visible + def setPlotIsVisible(self, visible): + self.__plot_is_visible = visible - def resizeEvent(self, event): - QWidget.resizeEvent(self, event) + def getPlotBridge(self): + """ @rtype: PlotBridge """ + return self.__plot_bridge - if self.isReady(): - self.updatePlotSize() + def renderNow(self): + if self.isPlotVisible(): + self.__plot_bridge.renderNow() - def updatePlotSize(self): - size = self.size() - self.web_view.page().mainFrame().evaluateJavaScript("setSize(%d,%d);" % (size.width(), size.height())) + def xAxisType(self): + """ @rtype: str """ + return self.__plot_bridge.xAxisType() + def yAxisType(self): + """ @rtype: str """ + return self.__plot_bridge.yAxisType() + def getXScales(self, data): + """ @rtype: (float, float) """ + return self.__plot_bridge.getXScales(data) + def getYScales(self, data): + """ @rtype: (float, float) """ + return self.__plot_bridge.getYScales(data) + def isReportStepCapable(self): + """ @rtype: bool """ + return self.__plot_bridge.isReportStepCapable() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel_tracker.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel_tracker.py new file mode 100644 index 0000000000..e518e06ae1 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_panel_tracker.py @@ -0,0 +1,56 @@ +from PyQt4.QtGui import QTabWidget + +class PlotPanelTracker(object): + def __init__(self, tab_widget): + """@type tab_widget: QTabWidget""" + super(PlotPanelTracker, self).__init__() + + self.__selected_widget_for_type = {} + self.__tab_widget = tab_widget + + self.__key_type_tester_map = {} + + def addKeyTypeTester(self, key_type, tester_function): + if key_type in self.__key_type_tester_map: + raise KeyError("Key type '%s' already exists!" % key_type) + + self.__key_type_tester_map[key_type] = tester_function + + + def storePlotType(self, fetcher, key): + """ + @type fetcher: PlotDataFetcher + @type key: str + """ + if key is not None: + for key_type in self.__key_type_tester_map: + data_type_tester_function = self.__key_type_tester_map[key_type] + + if data_type_tester_function(fetcher, key): + self.__selected_widget_for_type[key_type] = self.__tab_widget.currentWidget() + return + + raise NotImplementedError("Key '%s' not supported." % key) + + + def restorePlotType(self, fetcher, key): + """ + @type fetcher: PlotDataFetcher + @type key: str + """ + if key is not None: + for key_type in self.__key_type_tester_map: + data_type_tester_function = self.__key_type_tester_map[key_type] + + if data_type_tester_function(fetcher, key): + + if key_type in self.__selected_widget_for_type: + widget = self.__selected_widget_for_type[key_type] + self.__tab_widget.setCurrentWidget(widget) + else: + if self.__tab_widget.count() > 0: + self.__tab_widget.setCurrentIndex(0) + + return + + raise NotImplementedError("Key '%s' not supported." % key) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_scale_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_scale_widget.py new file mode 100644 index 0000000000..5459fc3631 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_scale_widget.py @@ -0,0 +1,143 @@ +from PyQt4.QtCore import pyqtSignal, Qt +from PyQt4.QtGui import QWidget, QVBoxLayout, QCheckBox, QDoubleSpinBox, QSpinBox, QStackedWidget, QSizePolicy, QLabel + +from ert.util import CTime +from ert_gui.models.connectors.plot import ReportStepsModel +from ert_gui.widgets.list_spin_box import ListSpinBox + + +class PlotScalesWidget(QWidget): + plotScaleChanged = pyqtSignal() + + def __init__(self, type_key, title, select_min_time_value=False): + QWidget.__init__(self) + + self.__type_key = type_key + self.__type = None + + self.__double_spinner = self.createDoubleSpinner(minimum=-999999999.0, maximum=999999999.0) + self.__integer_spinner = self.createIntegerSpinner(minimum=0, maximum=999999999) + + self.__time_map = ReportStepsModel().getList() + self.__time_index_map = {} + for index in range(len(self.__time_map)): + time = self.__time_map[index] + self.__time_index_map[time] = index + + self.__time_spinner = self.createTimeSpinner(select_minimum_value=select_min_time_value) + + layout = QVBoxLayout() + self.setLayout(layout) + + self.__label = QLabel(title) + self.__label.setAlignment(Qt.AlignHCenter) + + self.__stack = QStackedWidget() + self.__stack.setSizePolicy(QSizePolicy(QSizePolicy.Preferred)) + self.__stack.addWidget(self.__integer_spinner) + self.__stack.addWidget(self.__double_spinner) + self.__stack.addWidget(self.__time_spinner) + + layout.addWidget(self.__stack) + layout.addWidget(self.__label) + + self.setLayout(layout) + + def createDoubleSpinner(self, minimum, maximum): + spinner = QDoubleSpinBox() + spinner.setSizePolicy(QSizePolicy.Ignored, QSizePolicy.Ignored) + spinner.setMinimumWidth(105) + spinner.setRange(minimum, maximum) + spinner.setKeyboardTracking(False) + spinner.setDecimals(8) + + spinner.editingFinished.connect(self.plotScaleChanged) + spinner.valueChanged.connect(self.plotScaleChanged) + + return spinner + + def createIntegerSpinner(self, minimum, maximum): + spinner = QSpinBox() + spinner.setMinimumWidth(75) + spinner.setRange(minimum, maximum) + spinner.setKeyboardTracking(False) + + spinner.editingFinished.connect(self.plotScaleChanged) + spinner.valueChanged.connect(self.plotScaleChanged) + + return spinner + + def createTimeSpinner(self, select_minimum_value): + def converter(item): + return "%s" % (str(item.date())) + + spinner = ListSpinBox(self.__time_map) + spinner.setMinimumWidth(75) + + if select_minimum_value: + spinner.setValue(0) + + spinner.valueChanged[int].connect(self.plotScaleChanged) + spinner.editingFinished.connect(self.plotScaleChanged) + spinner.setStringConverter(converter) + + return spinner + + + def getValue(self): + if self.__type is int: + return self.__integer_spinner.value() + elif self.__type is float: + return self.__double_spinner.value() + elif self.__type is CTime: + index = self.__time_spinner.value() + return self.__time_map[index] + else: + raise TypeError("Unsupported spinner type: %s" % self.__type) + + + def setValue(self, value): + if value is not None: + if self.__type is int: + self.__integer_spinner.setValue(int(value)) + elif self.__type is float: + self.__double_spinner.setValue(value) + elif self.__type is CTime: + index = self.__time_index_map[value] + self.__time_spinner.setValue(index) + else: + raise TypeError("Unsupported spinner type: %s" % self.__type) + + + def setFontSize(self, size): + font = self.__double_spinner.font() + font.setPointSize(size) + self.__double_spinner.setFont(font) + + font = self.__integer_spinner.font() + font.setPointSize(size) + self.__integer_spinner.setFont(font) + + font = self.__time_spinner.font() + font.setPointSize(size) + self.__time_spinner.setFont(font) + + font = self.__label.font() + font.setPointSize(size) + self.__label.setFont(font) + + + def setType(self, spinner_type): + self.__type = spinner_type + if spinner_type is int: + self.__stack.setCurrentWidget(self.__integer_spinner) + elif spinner_type is float: + self.__stack.setCurrentWidget(self.__double_spinner) + elif spinner_type is CTime: + self.__stack.setCurrentWidget(self.__time_spinner) + else: + raise TypeError("Unsupported spinner type: %s" % spinner_type) + + + def getType(self): + return self.__type \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool.py index 82120a4e1f..8a4497f383 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool.py @@ -5,7 +5,7 @@ class PlotTool(Tool): def __init__(self): - super(PlotTool, self).__init__("Create Plot", util.resourceIcon("ide/chart_curve_add")) + super(PlotTool, self).__init__("Create Plot", "tools/plot", util.resourceIcon("ide/chart_curve_add")) def trigger(self): plot_window = PlotWindow(self.parent()) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool_bar.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool_bar.py new file mode 100644 index 0000000000..d549c4b8ad --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_tool_bar.py @@ -0,0 +1,105 @@ +from PyQt4.QtCore import Qt, pyqtSignal +from PyQt4.QtGui import QToolBar +from ert.util import CTime +from ert_gui.tools.plot import ReportStepWidget, PlotScalesWidget +from ert_gui.widgets import util + + +class PlotToolBar(QToolBar): + FONT_SIZE = 11 + + exportClicked = pyqtSignal() + resetScalesClicked = pyqtSignal() + reportStepChanged = pyqtSignal() + plotScalesChanged = pyqtSignal() + + def __init__(self): + QToolBar.__init__(self, "PlotTools") + + self.setObjectName("PlotToolBar") + self.setToolButtonStyle(Qt.ToolButtonTextUnderIcon) + + self.__reset_scales = self.createAction("Reset Scales", util.resourceIcon("ide/transform_scale")) + self.__reset_scales.triggered.connect(self.resetScalesClicked) + + self.__x_min, self.__x_min_action = self.addScaler("x_min", "X Minimum", spinner_type=CTime, select_min_time_value=True) + self.__x_max, self.__x_max_action = self.addScaler("x_max", "X Maximum", spinner_type=CTime) + self.__y_min, self.__y_min_action = self.addScaler("y_min", "Y Minimum", spinner_type=float, select_min_time_value=True) + self.__y_max, self.__y_max_action = self.addScaler("y_max", "Y Maximum", spinner_type=float) + + self.__report_step_widget = ReportStepWidget() + self.__report_step_widget.reportStepTimeSelected.connect(self.reportStepChanged) + self.__report_step_widget.setFontSize(PlotToolBar.FONT_SIZE) + + self.__report_step_widget_action = self.addWidget(self.__report_step_widget) + + self.addSeparator() + + export_action = self.createAction("Export Plot", util.resourceIcon("ide/table_export")) + export_action.triggered.connect(self.exportClicked) + + + def createAction(self, title, icon): + action = self.addAction(title) + action.setIcon(icon) + + w = self.widgetForAction(action) + font = w.font() + font.setPointSize(PlotToolBar.FONT_SIZE) + w.setFont(font) + + return action + + def addScaler(self, type_key, title, spinner_type, select_min_time_value=False): + scaler = PlotScalesWidget(type_key, title, select_min_time_value=select_min_time_value) + scaler.setFontSize(PlotToolBar.FONT_SIZE) + scaler.plotScaleChanged.connect(self.plotScalesChanged) + scaler.setType(spinner_type) + + action = self.addWidget(scaler) + + return scaler, action + + + def setToolBarOptions(self, x_type, y_type, report_step_capable): + self.blockSignals(True) + self.__x_min_action.setVisible(x_type is not None) + self.__x_max_action.setVisible(x_type is not None) + + self.__y_min_action.setVisible(y_type is not None) + self.__y_max_action.setVisible(y_type is not None) + + if x_type is not None: + self.__x_min.setType(x_type) + self.__x_max.setType(x_type) + + if y_type is not None: + self.__y_min.setType(y_type) + self.__y_max.setType(y_type) + + self.__report_step_widget_action.setVisible(report_step_capable) + self.blockSignals(False) + + + def getXScales(self): + return (self.__x_min.getValue()), (self.__x_max.getValue()) + + + def getYScales(self): + return (self.__y_min.getValue()), (self.__y_max.getValue()) + + + def getReportStep(self): + """ @rtype: CTime """ + return self.__report_step_widget.getSelectedValue() + + + def setScales(self, x_min, x_max, y_min, y_max): + self.blockSignals(True) + + self.__x_min.setValue(x_min) + self.__x_max.setValue(x_max) + self.__y_min.setValue(y_min) + self.__y_max.setValue(y_max) + + self.blockSignals(False) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_window.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_window.py index 94a042813c..394cea0d3e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_window.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/plot_window.py @@ -1,10 +1,9 @@ from PyQt4.QtCore import Qt -from PyQt4.QtGui import QMainWindow, QDockWidget, QTabWidget -from ert_gui.models.connectors.init.case_selector import CaseSelectorModel -from ert_gui.models.connectors.plot import EnsembleSummaryPlot -from ert_gui.tools.plot import PlotPanel -from ert_gui.tools.plot import DataTypeKeysWidget -from ert_gui.tools.plot.plot_case_selection_widget import CaseSelectionWidget +from PyQt4.QtGui import QMainWindow, QDockWidget, QTabWidget, QWidget, QVBoxLayout +from ert.util import CTime +from ert_gui.models.connectors.init import CaseSelectorModel +from ert_gui.tools.plot import PlotPanel, DataTypeKeysWidget, CaseSelectionWidget, ExportPlot, CustomizePlotWidget, PlotToolBar, PlotMetricsTracker, PlotPanelTracker +from ert_gui.tools.plot.data import PlotDataFetcher from ert_gui.widgets.util import may_take_a_long_time @@ -18,37 +17,235 @@ def __init__(self, parent): self.setWindowTitle("Plotting") self.activateWindow() - self.central_tab = QTabWidget() - self.setCentralWidget(self.central_tab) + self.__plot_data = None - self.plot_panel = PlotPanel("Plot", "gui/plots/simple_plot.html") - self.plot_panel.plotReady.connect(self.plotReady) - self.central_tab.addTab(self.plot_panel, "Ensemble plot") + self.__plot_metrics_tracker = PlotMetricsTracker() + self.__plot_metrics_tracker.addScaleType("value", float) + self.__plot_metrics_tracker.addScaleType("depth", float) + self.__plot_metrics_tracker.addScaleType("pca", float) + self.__plot_metrics_tracker.addScaleType("index", int) + self.__plot_metrics_tracker.addScaleType("count", int) + self.__plot_metrics_tracker.addScaleType("time", CTime) - self.plot_overview_panel = PlotPanel("Plot", "gui/plots/simple_overview_plot.html") - self.plot_overview_panel.plotReady.connect(self.plotReady) - self.central_tab.addTab(self.plot_overview_panel, "Ensemble overview plot") + self.__central_tab = QTabWidget() + self.__central_tab.currentChanged.connect(self.currentPlotChanged) - self.plot_debug_panel = PlotPanel("Debug", "gui/plots/simple_debug_plot.html") - self.plot_debug_panel.plotReady.connect(self.plotReady) - self.central_tab.addTab(self.plot_debug_panel, "Debug") + self.__plot_panel_tracker = PlotPanelTracker(self.__central_tab) + self.__plot_panel_tracker.addKeyTypeTester("summary", PlotDataFetcher.isSummaryKey) + self.__plot_panel_tracker.addKeyTypeTester("block", PlotDataFetcher.isBlockObservationKey) + self.__plot_panel_tracker.addKeyTypeTester("gen_kw", PlotDataFetcher.isGenKWKey) + self.__plot_panel_tracker.addKeyTypeTester("gen_data", PlotDataFetcher.isGenDataKey) + self.__plot_panel_tracker.addKeyTypeTester("custom_pca", PlotDataFetcher.isCustomPcaDataKey) - self.data_type_keys_widget = DataTypeKeysWidget() - self.data_type_keys_widget.dataTypeKeySelected.connect(self.keySelected) - self.addDock("Data types", self.data_type_keys_widget) + central_widget = QWidget() + central_layout = QVBoxLayout() + central_layout.setContentsMargins(0, 0, 0, 0) + central_widget.setLayout(central_layout) + + self.__toolbar = PlotToolBar() + self.__toolbar.resetScalesClicked.connect(self.resetCurrentScales) + + central_layout.addWidget(self.__toolbar) + central_layout.addWidget(self.__central_tab) + + self.setCentralWidget(central_widget) + + + self.__plot_panels = [] + """:type: list of PlotPanel""" + + self.addPlotPanel("Ensemble plot", "gui/plots/simple_plot.html", short_name="EP") + self.addPlotPanel("Ensemble overview plot", "gui/plots/simple_overview_plot.html", short_name="EOP") + self.addPlotPanel("Ensemble statistics", "gui/plots/ensemble_statistics_plot.html", short_name="ES") + self.addPlotPanel("Histogram", "gui/plots/histogram.html", short_name="Histogram") + self.addPlotPanel("Distribution", "gui/plots/gen_kw.html", short_name="Distribution") + self.addPlotPanel("RFT plot", "gui/plots/rft.html", short_name="RFT") + self.addPlotPanel("RFT overview plot", "gui/plots/rft_overview.html", short_name="oRFT") + self.addPlotPanel("Ensemble plot", "gui/plots/gen_data.html", short_name="epGenData") + self.addPlotPanel("Ensemble overview plot", "gui/plots/gen_data_overview.html", short_name="eopGenData") + self.addPlotPanel("Ensemble statistics", "gui/plots/gen_data_statistics_plot.html", short_name="esGenData") + self.addPlotPanel("PCA plot", "gui/plots/pca.html", short_name="PCA") + + self.__data_type_keys_widget = DataTypeKeysWidget() + self.__data_type_keys_widget.dataTypeKeySelected.connect(self.keySelected) + self.addDock("Data types", self.__data_type_keys_widget) current_case = CaseSelectorModel().getCurrentChoice() - self.case_selection_widget = CaseSelectionWidget(current_case) - self.case_selection_widget.caseSelectionChanged.connect(self.caseSelectionChanged) - self.addDock("Plot case", self.case_selection_widget) + self.__case_selection_widget = CaseSelectionWidget(current_case) + self.__case_selection_widget.caseSelectionChanged.connect(self.caseSelectionChanged) + plot_case_dock = self.addDock("Plot case", self.__case_selection_widget) + + self.__customize_plot_widget = CustomizePlotWidget() + self.__customize_plot_widget.customPlotSettingsChanged.connect(self.plotSettingsChanged) + customize_plot_dock = self.addDock("Customize", self.__customize_plot_widget) + + self.__toolbar.exportClicked.connect(self.exportActivePlot) + self.__toolbar.plotScalesChanged.connect(self.plotSettingsChanged) + self.__toolbar.reportStepChanged.connect(self.plotSettingsChanged) + + self.__exporter = None + self.tabifyDockWidget(plot_case_dock, customize_plot_dock) + + plot_case_dock.show() + plot_case_dock.raise_() + + self.__plot_cases = self.__case_selection_widget.getPlotCaseNames() + + + def fetchDefaultXScales(self): + if self.__plot_data is not None: + active_plot = self.getActivePlot() + x_axis_type_name = active_plot.xAxisType() + + x_axis_type = self.__plot_metrics_tracker.getType(x_axis_type_name) + + if x_axis_type is not None: + x_min, x_max = active_plot.getXScales(self.__plot_data) + + if x_axis_type is CTime and x_min is not None and x_max is not None: + x_min = int(x_min) + x_max = int(x_max) + + self.__plot_metrics_tracker.setScalesForType(x_axis_type_name, x_min, x_max) + + + + def fetchDefaultYScales(self): + if self.__plot_data is not None: + active_plot = self.getActivePlot() + y_axis_type_name = active_plot.yAxisType() + + y_axis_type = self.__plot_metrics_tracker.getType(y_axis_type_name) + + if y_axis_type is not None: + y_min, y_max = active_plot.getYScales(self.__plot_data) + + if y_axis_type is CTime and y_min is not None and y_max is not None: + y_min = int(y_min) + y_max = int(y_max) + + self.__plot_metrics_tracker.setScalesForType(y_axis_type_name, y_min, y_max) + + + def resetCurrentScales(self): + active_plot = self.getActivePlot() + x_axis_type_name = active_plot.xAxisType() + y_axis_type_name = active_plot.yAxisType() + + self.__plot_metrics_tracker.resetScaleType(x_axis_type_name) + self.__plot_metrics_tracker.resetScaleType(y_axis_type_name) + + self.currentPlotChanged() + self.plotSettingsChanged() + + + def getActivePlot(self): + """ @rtype: PlotPanel """ + if not self.__central_tab.currentIndex() > -1: + raise AssertionError("No plot selected!") + + active_plot = self.__central_tab.currentWidget() + assert isinstance(active_plot, PlotPanel) + + return active_plot + + + def currentPlotChanged(self): + active_plot = self.getActivePlot() + + if active_plot.isReady(): + x_axis_type_name = active_plot.xAxisType() + x_axis_type = self.__plot_metrics_tracker.getType(x_axis_type_name) + + y_axis_type_name = active_plot.yAxisType() + y_axis_type = self.__plot_metrics_tracker.getType(y_axis_type_name) + + if not self.__plot_metrics_tracker.hasScale(x_axis_type_name): + self.fetchDefaultXScales() + + if not self.__plot_metrics_tracker.hasScale(y_axis_type_name): + self.fetchDefaultYScales() + + x_min, x_max = self.__plot_metrics_tracker.getScalesForType(x_axis_type_name) + y_min, y_max = self.__plot_metrics_tracker.getScalesForType(y_axis_type_name) - self.__data_type_key = None - self.__plot_cases = self.case_selection_widget.getPlotCaseNames() + self.__toolbar.setToolBarOptions(x_axis_type, y_axis_type, active_plot.isReportStepCapable() and self.__plot_metrics_tracker.dataTypeSupportsReportStep()) + self.__toolbar.setScales(x_min, x_max, y_min, y_max) + def plotSettingsChanged(self): + x_min, x_max = self.__toolbar.getXScales() + y_min, y_max = self.__toolbar.getYScales() + active_plot = self.getActivePlot() + x_axis_type_name = active_plot.xAxisType() + y_axis_type_name = active_plot.yAxisType() + + self.__plot_metrics_tracker.setScalesForType(x_axis_type_name, x_min, x_max) + self.__plot_metrics_tracker.setScalesForType(y_axis_type_name, y_min, y_max) + + self.updatePlots() + + + def updatePlots(self): + report_step = self.__toolbar.getReportStep() + + for plot_panel in self.__plot_panels: + if plot_panel.isPlotVisible(): + model = plot_panel.getPlotBridge() + model.setPlotData(self.__plot_data) + model.setCustomSettings(self.__customize_plot_widget.getCustomSettings()) + model.setReportStepTime(report_step) + + x_axis_type_name = plot_panel.xAxisType() + y_axis_type_name = plot_panel.yAxisType() + + x_min, x_max = self.__plot_metrics_tracker.getScalesForType(x_axis_type_name) + y_min, y_max = self.__plot_metrics_tracker.getScalesForType(y_axis_type_name) + + model.setScales(x_min, x_max, y_min, y_max) + + plot_panel.renderNow() + + + def exportActivePlot(self): + active_plot = self.getActivePlot() + + if self.__exporter is None: + path = None + else: + path = self.__exporter.getCurrentPath() + + + report_step = self.__toolbar.getReportStep() + + x_axis_type_name = active_plot.xAxisType() + y_axis_type_name = active_plot.yAxisType() + + x_min, x_max = self.__plot_metrics_tracker.getScalesForType(x_axis_type_name) + y_min, y_max = self.__plot_metrics_tracker.getScalesForType(y_axis_type_name) + + settings = {"x_min": x_min, + "x_max": x_max, + "y_min": y_min, + "y_max": y_max, + "report_step": report_step} + + self.__exporter = ExportPlot(active_plot, settings, self.__customize_plot_widget.getCustomSettings(), path) + + self.__exporter.export() + + + def addPlotPanel(self, name, path, short_name=None): + if short_name is None: + short_name = name + + plot_panel = PlotPanel(name, short_name, path) + plot_panel.plotReady.connect(self.plotReady) + self.__plot_panels.append(plot_panel) + self.__central_tab.addTab(plot_panel, name) def addDock(self, name, widget, area=Qt.LeftDockWidgetArea, allowed_areas=Qt.AllDockWidgetAreas): @@ -63,24 +260,86 @@ def addDock(self, name, widget, area=Qt.LeftDockWidgetArea, allowed_areas=Qt.All def checkPlotStatus(self): - return self.plot_panel.isReady() and self.plot_debug_panel.isReady() and self.plot_overview_panel.isReady() + for plot_panel in self.__plot_panels: + if not plot_panel.isReady(): + return False + + if len(self.__plot_cases) == 0: + return False + + return True def plotReady(self): if self.checkPlotStatus(): - self.data_type_keys_widget.selectDefault() + self.__data_type_keys_widget.selectDefault() + self.currentPlotChanged() + self.__customize_plot_widget.emitChange() def caseSelectionChanged(self): - self.__plot_cases = self.case_selection_widget.getPlotCaseNames() - self.keySelected(self.__data_type_key) + self.__plot_cases = self.__case_selection_widget.getPlotCaseNames() + self.keySelected(self.__plot_metrics_tracker.getDataTypeKey()) + + + def showOrHidePlotTab(self, plot_panel, is_visible, show_plot): + plot_panel.setPlotIsVisible(show_plot) + if show_plot and not is_visible: + index = self.__plot_panels.index(plot_panel) + self.__central_tab.insertTab(index, plot_panel, plot_panel.getName()) + elif not show_plot and is_visible: + index = self.__central_tab.indexOf(plot_panel) + self.__central_tab.removeTab(index) + @may_take_a_long_time def keySelected(self, key): - self.__data_type_key = str(key) + key = str(key) + old_data_type_key = self.__plot_metrics_tracker.getDataTypeKey() + self.__plot_metrics_tracker.setDataTypeKey(key) + + plot_data_fetcher = PlotDataFetcher() + self.__plot_data = plot_data_fetcher.getPlotDataForKeyAndCases(key, self.__plot_cases) + self.__plot_data.setParent(self) + + self.__central_tab.blockSignals(True) + + self.__plot_panel_tracker.storePlotType(plot_data_fetcher, old_data_type_key) + + for plot_panel in self.__plot_panels: + self.showOrHidePlotTab(plot_panel, False, True) + + self.__plot_metrics_tracker.setDataTypeKeySupportsReportSteps(plot_data_fetcher.dataTypeKeySupportsReportSteps(key)) + show_pca = plot_data_fetcher.isPcaDataKey(key) + for plot_panel in self.__plot_panels: + visible = self.__central_tab.indexOf(plot_panel) > -1 + + if plot_data_fetcher.isSummaryKey(key): + show_plot = plot_panel.supportsPlotProperties(time=True, value=True, histogram=True, pca=show_pca) + self.showOrHidePlotTab(plot_panel, visible, show_plot) + + elif plot_data_fetcher.isBlockObservationKey(key): + show_plot = plot_panel.supportsPlotProperties(depth=True, value=True, pca=show_pca) + self.showOrHidePlotTab(plot_panel, visible, show_plot) + + elif plot_data_fetcher.isGenKWKey(key): + show_plot = plot_panel.supportsPlotProperties(value=True, histogram=True, pca=show_pca) + self.showOrHidePlotTab(plot_panel, visible, show_plot) + + elif plot_data_fetcher.isGenDataKey(key): + show_plot = plot_panel.supportsPlotProperties(index=True, pca=show_pca) + self.showOrHidePlotTab(plot_panel, visible, show_plot) + + elif plot_data_fetcher.isPcaDataKey(key): + show_plot = plot_panel.supportsPlotProperties(pca=show_pca) + self.showOrHidePlotTab(plot_panel, visible, show_plot) + + else: + raise NotImplementedError("Key %s not supported." % key) + + self.__plot_panel_tracker.restorePlotType(plot_data_fetcher, key) + + self.__central_tab.blockSignals(False) + self.currentPlotChanged() if self.checkPlotStatus(): - # print("Key selected: %s for %s" % (key, self.__plot_cases)) - data = EnsembleSummaryPlot().getPlotDataForKeyAndCases(self.__data_type_key, self.__plot_cases) - self.plot_panel.setPlotData(data) - self.plot_overview_panel.setPlotData(data) - self.plot_debug_panel.setPlotData(data) \ No newline at end of file + self.plotSettingsChanged() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/report_step_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/report_step_widget.py new file mode 100644 index 0000000000..e16176470e --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/plot/report_step_widget.py @@ -0,0 +1,45 @@ +from PyQt4.QtCore import pyqtSignal, Qt +from PyQt4.QtGui import QWidget, QVBoxLayout, QLabel +from ert_gui.models.connectors.plot.report_steps import ReportStepsModel +from ert_gui.widgets.list_spin_box import ListSpinBox + + +class ReportStepWidget(QWidget): + reportStepTimeSelected = pyqtSignal(int) + def __init__(self): + QWidget.__init__(self) + + layout = QVBoxLayout() + self.setLayout(layout) + + def converter(item): + return "%s" % (str(item.date())) + + self.__items = ReportStepsModel().getList() + self.__time_spinner = ListSpinBox(self.__items) + self.__time_spinner.valueChanged[int].connect(self.valueSelected) + self.__time_spinner.setStringConverter(converter) + layout.addWidget(self.__time_spinner) + + self.__label = QLabel("Report Step") + + layout.addWidget(self.__label, 0, Qt.AlignHCenter) + layout.addStretch() + + + def valueSelected(self, index): + self.reportStepTimeSelected.emit(self.__items[index]) + + def getSelectedValue(self): + """ @rtype: CTime """ + index = self.__time_spinner.value() + return self.__items[index] + + def setFontSize(self, size): + font = self.__time_spinner.font() + font.setPointSize(size) + self.__time_spinner.setFont(font) + + font = self.__label.font() + font.setPointSize(size) + self.__label.setFont(font) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/tool.py index 020da39429..516b230429 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/tool.py @@ -1,12 +1,24 @@ +from PyQt4.QtGui import QAction +from ert_gui.tools import HelpCenter + class Tool(object): - def __init__(self, name, icon=None, enabled=True): + def __init__(self, name, help_link="", icon=None, enabled=True, checkable=False): super(Tool, self).__init__() self.__icon = icon self.__name = name self.__parent = None self.__enabled = enabled + self.__checkable = checkable + self.__help_link = help_link + + self.__action = QAction(self.getIcon(), self.getName(), None) + self.__action.setIconText(self.getName()) + self.__action.setEnabled(self.isEnabled()) + self.__action.setCheckable(checkable) + self.__action.triggered.connect(self.trigger) + HelpCenter.addHelpToAction(self.__action, self.getHelpLink()) def getIcon(self): return self.__icon @@ -19,10 +31,23 @@ def trigger(self): def setParent(self, parent): self.__parent = parent + self.__action.setParent(parent) def parent(self): return self.__parent - def isEnabled(self): return self.__enabled + + def getHelpLink(self): + return self.__help_link + + + def getAction(self): + return self.__action + + def setVisible(self, visible): + self.__action.setVisible(visible) + + def setEnabled(self, enabled): + self.__action.setEnabled(enabled) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/run_workflow_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/run_workflow_widget.py index 997089bef0..2739486b5e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/run_workflow_widget.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/run_workflow_widget.py @@ -4,14 +4,16 @@ import time from ert_gui.models.connectors.run import WorkflowsModel from ert_gui.widgets import util -from ert_gui.widgets.closable_dialog import ClosableDialog from ert_gui.widgets.combo_choice import ComboChoice +from ert_gui.widgets.workflow_dialog import WorkflowDialog class RunWorkflowWidget(QWidget): workflowSucceeded = pyqtSignal() workflowFailed = pyqtSignal() + workflowKilled = pyqtSignal() + reloadErtTriggered = pyqtSignal() def __init__(self): QWidget.__init__(self) @@ -45,8 +47,10 @@ def __init__(self): self.workflowSucceeded.connect(self.workflowFinished) self.workflowFailed.connect(self.workflowFinishedWithFail) + self.workflowKilled.connect(self.workflowStoppedByUser) - + self.__workflow_runner = None + """:type: WorkflowRunner""" def createSpinWidget(self): @@ -73,26 +77,47 @@ def createSpinWidget(self): return widget + def cancelWorkflow(self): + if self.__workflow_runner.isRunning(): + + cancel = QMessageBox.question(self, "Confirm stop", "ERT might need to shut down when a workflow is stopped - do you want to proceed?", QMessageBox.Yes | QMessageBox.No) + + if cancel == QMessageBox.Yes: + self.__workflow_runner.cancel() + self.__running_workflow_dialog.disableCloseButton() + + def startWorkflow(self): - self.__running_workflow_dialog = ClosableDialog("Running Workflow", self.createSpinWidget(), self) - self.__running_workflow_dialog.disableCloseButton() + self.__running_workflow_dialog = WorkflowDialog("Running Workflow", self.createSpinWidget(), self) + #self.__running_workflow_dialog.disableCloseButton() + self.__running_workflow_dialog.closeButtonPressed.connect(self.cancelWorkflow) workflow_thread = Thread(name="ert_gui_workflow_thread") workflow_thread.setDaemon(True) workflow_thread.run = self.runWorkflow + + self.__workflow_runner = WorkflowsModel().createWorkflowRunner() + self.__workflow_runner.run() + workflow_thread.start() self.__running_workflow_dialog.show() - def runWorkflow(self): - success = WorkflowsModel().startWorkflow() + while self.__workflow_runner.isRunning(): + time.sleep(2) - if not success: - self.workflowFailed.emit() + cancelled = self.__workflow_runner.isCancelled() + + if cancelled: + self.workflowKilled.emit() else: - self.workflowSucceeded.emit() + success = self.__workflow_runner.workflowResult() + if not success: + self.workflowFailed.emit() + else: + self.workflowSucceeded.emit() def workflowFinished(self): workflow_name = WorkflowsModel().getCurrentChoice() @@ -100,14 +125,18 @@ def workflowFinished(self): self.__running_workflow_dialog.accept() self.__running_workflow_dialog = None - def workflowFinishedWithFail(self): workflow_name = WorkflowsModel().getCurrentChoice() - error = WorkflowsModel().getError() + + error = self.__workflow_runner.workflowError() + QMessageBox.critical(self, "Workflow failed!", "The workflow '%s' failed!\n\n%s" % (workflow_name, error)) self.__running_workflow_dialog.reject() self.__running_workflow_dialog = None - - - + def workflowStoppedByUser(self): + workflow_name = WorkflowsModel().getCurrentChoice() + QMessageBox.information(self, "Workflow killed!", "The workflow '%s' was killed successfully!" % workflow_name) + self.__running_workflow_dialog.reject() + self.__running_workflow_dialog = None + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/workflows_tool.py b/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/workflows_tool.py index 957886b392..a7a4290025 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/workflows_tool.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/tools/workflows/workflows_tool.py @@ -1,3 +1,5 @@ +from ert_gui.models.connectors.init import CaseList +from ert_gui.models.connectors.run.workflows_model import WorkflowsModel from ert_gui.tools import Tool from ert_gui.tools.workflows import RunWorkflowWidget from ert_gui.widgets import util @@ -5,11 +7,16 @@ class WorkflowsTool(Tool): - def __init__(self): - super(WorkflowsTool, self).__init__("Run Workflow", util.resourceIcon("ide/to_do_list_checked_1")) + def __init__(self,reload_function): + self.reload_function = reload_function + enabled = len(WorkflowsModel().getList()) > 0 + super(WorkflowsTool, self).__init__("Run Workflow", "tools/workflows", util.resourceIcon("ide/to_do_list_checked_1"), enabled) + def trigger(self): run_workflow_widget = RunWorkflowWidget() + run_workflow_widget.reloadErtTriggered.connect(self.reload_function) dialog = ClosableDialog("Run workflow", run_workflow_widget, self.parent()) dialog.exec_() + CaseList().externalModificationNotification() # workflow may have added new cases. diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/CMakeLists.txt new file mode 100644 index 0000000000..f8d5a769c3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/CMakeLists.txt @@ -0,0 +1,18 @@ +set(PYTHON_SOURCES + __init__.py + bounds.py + camera.py + opengl_tools.py + polyline_drawer.py + shader_program.py + shader_source.py + slice_settings_widget.py + slice_viewer.py + slice_viewer_widget.py + texture.py + unity_quaternion.py + vertex_buffer_object.py +) + +add_python_package("python.ert_gui.viewer" ${PYTHON_INSTALL_PREFIX}/ert_gui/viewer "${PYTHON_SOURCES}" True) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/__init__.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/__init__.py new file mode 100644 index 0000000000..8eab3aa6cb --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/__init__.py @@ -0,0 +1,12 @@ +from .opengl_tools import GLTools +from .bounds import Bounds +from .unity_quaternion import UnityQuaternion +from .polyline_drawer import PolylineDrawer +from .camera import Camera +from .vertex_buffer_object import VertexBufferObject +from .texture import Texture3D, Texture1D +from .shader_source import ShaderSource +from .shader_program import ShaderProgram + +from .slice_settings_widget import SliceSettingsWidget +from .slice_viewer_widget import SliceViewer \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/bounds.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/bounds.py new file mode 100644 index 0000000000..b7a11772dd --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/bounds.py @@ -0,0 +1,75 @@ +class Bounds(object): + def __init__(self): + super(Bounds, self).__init__() + + self.__min_x = None + self.__min_y = None + self.__min_z = None + + self.__max_x = None + self.__max_y = None + self.__max_z = None + + + def addPoint(self, x, y, z): + if self.__min_x is None or x < self.__min_x: + self.__min_x = x + + if self.__min_y is None or y < self.__min_y: + self.__min_y = y + + if self.__min_z is None or z < self.__min_z: + self.__min_z = z + + if self.__max_x is None or x > self.__max_x: + self.__max_x = x + + if self.__max_y is None or y > self.__max_y: + self.__max_y = y + + if self.__max_z is None or z > self.__max_z: + self.__max_z = z + + def __str__(self): + return "x: [%f %f] y: [%f %f] z: [%f %f]" % (self.minX, self.maxX, self.minY, self.maxY, self.minZ, self.maxZ) + + + def getMinX(self): + return self.__min_x + + def getMinY(self): + return self.__min_y + + def getMinZ(self): + return self.__min_z + + + def getMaxX(self): + return self.__max_x + + def getMaxY(self): + return self.__max_y + + def getMaxZ(self): + return self.__max_z + + def getXDiff(self): + return self.maxX - self.minX + + def getYDiff(self): + return self.maxY - self.minY + + def getZDiff(self): + return self.maxZ - self.minZ + + minX = property(getMinX) + minY = property(getMinY) + minZ = property(getMinZ) + + maxX = property(getMaxX) + maxY = property(getMaxY) + maxZ = property(getMaxZ) + + diffX = property(getXDiff) + diffY = property(getYDiff) + diffZ = property(getZDiff) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/camera.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/camera.py new file mode 100644 index 0000000000..667f1a006c --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/camera.py @@ -0,0 +1,110 @@ +from OpenGL.GL import * +from OpenGL.GLU import gluPerspective +from ert_gui.viewer import UnityQuaternion + + +class Camera(object): + def __init__(self): + super(Camera, self).__init__() + + self.__quaternion = None + self.__zoom = None + + self.__width_aspect = 1.0 + self.__height_aspect = 1.0 + self.__aspect = 1.0 + + self.__orthographic_projection = False + + self.__mirror_x = False + self.__mirror_y = False + self.__mirror_z = False + + self.resetCamera() + + + def resetCamera(self): + rot_y = UnityQuaternion(180.0, 0.0, 1.0, 0.0) + self.__quaternion = rot_y * UnityQuaternion(0.0, 1.0, 0.0, 0.0) + self.__zoom = 1.0 + + def rotate(self, x, y, z=0.0): + rot_x = UnityQuaternion(x, 1.0, 0.0, 0.0) + rot_y = UnityQuaternion(y, 0.0, 1.0, 0.0) + rot_z = UnityQuaternion(z, 0.0, 0.0, 1.0) + + self.__quaternion = rot_x * rot_y * rot_z * self.__quaternion + + def __applyProjection(self): + if self.__orthographic_projection: + w = self.__width_aspect * self.__zoom + h = self.__height_aspect * self.__zoom + glOrtho(-w, w, -h, h, 0, 2000) + else: + # glFrustum(-width_aspect, width_aspect, -height_aspect, height_aspect, 0.1, 20) + gluPerspective(60 * self.__zoom, self.__aspect, 0.1, 3000) + + + def applyCamera(self): + glMatrixMode(GL_MODELVIEW) + glTranslate(0.0, 0.0, -1.0) + glRotate(self.__quaternion.getAngleAsDegrees(), self.__quaternion.X, self.__quaternion.Y, self.__quaternion.Z) + + if self.__mirror_x: + glScale(-1.0, 1.0, 1.0) + + if self.__mirror_y: + glScale(1.0, -1.0, 1.0) + + if self.__mirror_z: + glScale(1.0, 1.0, -1.0) + + glMatrixMode(GL_PROJECTION) + glLoadIdentity() + + self.__applyProjection() + + glMatrixMode(GL_MODELVIEW) + + + def setupProjection(self, width, height): + glMatrixMode(GL_PROJECTION) + glLoadIdentity() + + glViewport(0, 0, width, height) + + if width != 0 and height != 0: + self.__aspect = width / float(height) + if height > width: + self.__height_aspect = float(height) / width + else: + self.__width_aspect = float(width) / height + + self.__applyProjection() + + glMatrixMode(GL_MODELVIEW) + glLoadIdentity() + + + def adjustZoom(self, delta): + self.__zoom += delta + + if self.__zoom < 0.1: + self.__zoom = 0.1 + + if self.__zoom > 2.0: + self.__zoom = 2.0 + + def useOrthographicProjection(self, on): + self.__orthographic_projection = on + + def mirrorX(self, on): + self.__mirror_x = on + + def mirrorY(self, on): + self.__mirror_y = on + + def mirrorZ(self, on): + self.__mirror_z = on + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/opengl_tools.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/opengl_tools.py new file mode 100644 index 0000000000..e55cf3ad0e --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/opengl_tools.py @@ -0,0 +1,11 @@ +from OpenGL.GL import * +from OpenGL.raw.GLU import gluErrorString + +class GLTools(object): + @staticmethod + def checkForGLError(message=""): + glFlush() + error = glGetError() + if error != GL_NO_ERROR: + print("Error occured: %s" % message) + raise UserWarning("OpenGL Error code: %d with message: %s" % (error, gluErrorString(error))) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/polyline_drawer.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/polyline_drawer.py new file mode 100644 index 0000000000..24fcf8d98e --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/polyline_drawer.py @@ -0,0 +1,32 @@ +from OpenGL.GL import * +from ert.geo.polyline import Polyline + + +class PolylineDrawer(object): + @staticmethod + def drawPolyline(polyline): + assert isinstance(polyline, Polyline) + + glColor(1.0, 1.0, 1.0) + glLineWidth(2.0) + + glBegin(GL_LINE_STRIP) + + for x, y, z in polyline: + glVertex(x, y, z) + + glEnd() + + @staticmethod + def drawPolylineFlat(polyline, static_z): + assert isinstance(polyline, Polyline) + + glColor(1.0, 1.0, 1.0) + glLineWidth(2.0) + + glBegin(GL_LINE_STRIP) + + for x, y, z in polyline: + glVertex(x, y, static_z) + + glEnd() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_program.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_program.py new file mode 100644 index 0000000000..8d40440f68 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_program.py @@ -0,0 +1,139 @@ +from OpenGL.GL import * +from ert_gui.viewer import GLTools, ShaderSource + +class ShaderProgram(object): + def __init__(self, name): + super(ShaderProgram, self).__init__() + self.__name = name + self.__shader_sources = [] + """ :type: list of ShaderSource """ + + self.__program_object = None + + self.__compiled = False + + + def addShaderSource(self, shader_source): + """ + @type shader_source: ShaderSource + """ + self.__shader_sources.append(shader_source) + + + def compileProgram(self): + if self.__program_object is None: + self.__program_object = glCreateProgram() + + if self.needsCompile(): + for shader_source in self.__shader_sources: + shader_source.detach(self.__program_object) + shader_source.compileShader() + shader_source.attach(self.__program_object) + + glLinkProgram(self.__program_object) + self.checkLinkingStatus() + + if self.__compiled: + print("Program '%s' compiled and linked!" % self.__name) + + + def needsCompile(self): + """ @rtype: bool """ + source_needs_compile = False + + for shader_source in self.__shader_sources: + if shader_source.needsCompile(): + source_needs_compile = True + + return not self.__compiled or source_needs_compile + + + def checkLinkingStatus(self): + self.__compiled = True + link_status = glGetProgramiv(self.__program_object, GL_LINK_STATUS) + if link_status == GL_FALSE: + length = glGetProgramiv(self.__program_object, GL_INFO_LOG_LENGTH) + if length > 0: + print(glGetProgramInfoLog(self.__program_object)) + + print("Linking of shader '%s' failed!" % self.__name) + self.__compiled = False + + + # def setUniform1i(self, name, value): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform1i(location, value) + # + # def setUniform1f(self, name, value): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform1f(location, value) + + + def setUniformi(self, name, *args): + if not self.needsCompile(): + count = len(args) + if 0 < count <= 4: + location = glGetUniformLocation(self.__program_object, name) + + if count == 1: + glUniform1i(location, args[0]) + elif count == 2: + glUniform2i(location, args[0], args[1]) + elif count == 3: + glUniform3i(location, args[0], args[1], args[2]) + elif count == 4: + glUniform4i(location, args[0], args[1], args[2], args[3]) + + def setUniformf(self, name, *args): + if not self.needsCompile(): + count = len(args) + if 0 < count <= 4: + location = glGetUniformLocation(self.__program_object, name) + + if count == 1: + glUniform1f(location, args[0]) + elif count == 2: + glUniform2f(location, args[0], args[1]) + elif count == 3: + glUniform3f(location, args[0], args[1], args[2]) + elif count == 4: + glUniform4f(location, args[0], args[1], args[2], args[3]) + + # def setUniform4i(self, name, v1, v2, v3, v4): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform4i(location, v1, v2, v3, v4) + # + # def setUniform4f(self, name, v1, v2, v3, v4): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform4f(location, v1, v2, v3, v4) + # + # def setUniform4i(self, name, v1, v2, v3, v4): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform4i(location, v1, v2, v3, v4) + # + # def setUniform4f(self, name, v1, v2, v3, v4): + # if not self.needsCompile(): + # location = glGetUniformLocation(self.__program_object, name) + # glUniform4f(location, v1, v2, v3, v4) + + + def bindProgram(self): + GLTools.checkForGLError() + + if self.needsCompile(): + self.unbindProgram() + self.compileProgram() + + if not self.needsCompile(): + glUseProgram(self.__program_object) + GLTools.checkForGLError() + + def unbindProgram(self): + GLTools.checkForGLError() + glUseProgram(0) + GLTools.checkForGLError() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_source.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_source.py new file mode 100644 index 0000000000..0a247b7618 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/shader_source.py @@ -0,0 +1,75 @@ +import os +from OpenGL.GL import * +from ert_gui.viewer import GLTools + + +class ShaderSource(object): + + def __init__(self, shader_source): + super(ShaderSource, self).__init__() + + if not os.path.exists(shader_source): + raise IOError("Shader source file '%s' does not exist!" % shader_source) + + if shader_source.endswith(".vertex") or shader_source.endswith(".vp"): + self.__type = GL_VERTEX_SHADER + elif shader_source.endswith(".fragment") or shader_source.endswith(".fp"): + self.__type = GL_FRAGMENT_SHADER + else: + raise UserWarning("Unknown shader file type: %s" % shader_source) + + self.__time_stamp = 0 + self.__shader_source = shader_source + self.__shader_object = None + self.__compiled = False + self.__attached = None + + + def compileShader(self): + if self.__shader_object is None: + self.__shader_object = glCreateShader(self.__type) + + if self.needsCompile(): + with open(self.__shader_source, "r") as f: + shader_code = f.read() + + glShaderSource(self.__shader_object, shader_code) + GLTools.checkForGLError() + + glCompileShader(self.__shader_object) + # self.checkForError() + + self.checkCompileStatus() + + if self.__compiled: + self.__time_stamp = os.path.getmtime(self.__shader_source) + print("Shader source '%s' compiled!" % self.__shader_source) + + def getType(self): + return self.__type + + def needsCompile(self): + """ @rtype: bool """ + return not self.__compiled or os.path.getmtime(self.__shader_source) != self.__time_stamp + + def checkCompileStatus(self): + self.__compiled = True + compile_status = glGetShaderiv(self.__shader_object, GL_COMPILE_STATUS) + if compile_status == GL_FALSE: + length = glGetShaderiv(self.__shader_object, GL_INFO_LOG_LENGTH) + if length > 0: + print(glGetShaderInfoLog(self.__shader_object)) + + print("Compilation of shader '%s' failed!" % self.__shader_source) + + self.__compiled = False + + def attach(self, program_object): + if self.__attached is None: + self.__attached = program_object + glAttachShader(program_object, self.__shader_object) + + def detach(self, program_object): + if self.__attached is not None: + self.__attached = None + glDetachShader(program_object, self.__shader_object) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_settings_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_settings_widget.py new file mode 100644 index 0000000000..009903a91c --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_settings_widget.py @@ -0,0 +1,58 @@ +from PyQt4.QtCore import pyqtSignal, QString +from PyQt4.QtGui import QWidget, QCheckBox, QVBoxLayout, QSpinBox, QFormLayout, QComboBox + + +class SliceSettingsWidget(QWidget): + + inactiveCellsHidden = pyqtSignal(bool) + regionToggling = pyqtSignal(bool) + toggleOrthographicProjection = pyqtSignal(bool) + toggleLighting = pyqtSignal(bool) + currentSliceChanged = pyqtSignal(int) + colorScalesChanged = pyqtSignal(QString) + toggleInterpolation = pyqtSignal(bool) + mirrorX = pyqtSignal(bool) + mirrorY = pyqtSignal(bool) + mirrorZ = pyqtSignal(bool) + toggleFlatPolylines = pyqtSignal(bool) + + def __init__(self, max_slice_count, color_scales): + QWidget.__init__(self) + + self.setMinimumWidth(250) + + self.__layout = QFormLayout() + + self.addCheckBox("Hide inactive cells", self.inactiveCellsHidden) + self.addSpinBox("Slice #", 0, max_slice_count - 1, self.currentSliceChanged) + self.addCheckBox("Orthographic proj.", self.toggleOrthographicProjection) + self.addCheckBox("Lighting", self.toggleLighting) + self.addComboBox("Color scale", self.colorScalesChanged, color_scales) + self.addCheckBox("Region scaling", self.regionToggling) + self.addCheckBox("Interpolate data", self.toggleInterpolation) + self.addCheckBox("Mirror X", self.mirrorX) + self.addCheckBox("Mirror Y", self.mirrorY) + self.addCheckBox("Mirror Z", self.mirrorZ) + self.addCheckBox("Flat polylines", self.toggleFlatPolylines) + + self.setLayout(self.__layout) + + + def addCheckBox(self, label, signal): + checkbox = QCheckBox() + checkbox.toggled.connect(signal) + self.__layout.addRow(label, checkbox) + + + def addSpinBox(self, label, min_value, max_value, signal): + spinner = QSpinBox() + spinner.setMinimum(min_value) + spinner.setMaximum(max_value) + spinner.valueChanged[int].connect(signal) + self.__layout.addRow(label, spinner) + + def addComboBox(self, label, signal, choices): + combo = QComboBox() + combo.addItems(choices) + combo.currentIndexChanged[QString].connect(signal) + self.__layout.addRow(label, combo) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer.py new file mode 100644 index 0000000000..1b50b14add --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer.py @@ -0,0 +1,248 @@ +import os +from OpenGL.GL import * +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QApplication, QMainWindow, QDockWidget +import sys +import traceback +from ert.ecl import EclTypeEnum, EclKW, EclGrid +from ert.ecl.faults import FaultCollection +from ert.geo.xyz_io import XYZIo +from ert_gui.viewer import Texture3D, Bounds, SliceViewer, SliceSettingsWidget, Texture1D + + +def loadGrid(path, load_actnum=True): + """ @rtype: EclGrid """ + with open(path, "r") as f: + specgrid = EclKW.read_grdecl(f, "SPECGRID", ecl_type=EclTypeEnum.ECL_INT_TYPE, strict=False) + zcorn = EclKW.read_grdecl(f, "ZCORN") + coord = EclKW.read_grdecl(f, "COORD") + + actnum = None + if load_actnum: + actnum = EclKW.read_grdecl(f, "ACTNUM", ecl_type=EclTypeEnum.ECL_INT_TYPE) + + mapaxes = EclKW.read_grdecl(f, "MAPAXES") + grid = EclGrid.create(specgrid, zcorn, coord, actnum, mapaxes=mapaxes) + + return grid + + +def loadKW(keyword, ecl_type, path): + """ @rtype: EclKW """ + with open(path, "r") as f: + kw_data = EclKW.read_grdecl(f, keyword, ecl_type=ecl_type) + + return kw_data + +def loadGridData(path): + grid = loadGrid(path) + + nx, ny, nz, nactive = grid.dims + print(nx, ny, nz) + + bounds = Bounds() + + grid_data = [] + index = 0 + for z in range(nz): + for y in range(ny): + for x in range(nx): + # x, y, z = grid.get_corner_xyz(0, global_index=index) + x, y, z = grid.get_xyz(global_index=index) + active = grid.active(global_index=index) + if active: + active = 1.0 + else: + active = 0.0 + + bounds.addPoint(x, y, z) + + grid_data.append(x) + grid_data.append(y) + grid_data.append(z) + grid_data.append(active) + index += 1 + + print(bounds) + + return nx, ny, nz, grid_data, bounds,grid + + +def loadKWData(path, keyword, ecl_type=EclTypeEnum.ECL_FLOAT_TYPE): + kw_data = loadKW(keyword, ecl_type, path) + + print(kw_data.min, kw_data.max) + + min_value = kw_data.min + data_range = kw_data.max - kw_data.min + + result = [] + for value in kw_data: + value = float(value - min_value) / data_range + result.append(value) + + return result, data_range + + +def rgb(r, g, b): + return [r / 255.0, g / 255.0, b / 255.0, 1.0] + +def createColorBrewerScale(): + color_list = [rgb(141,211,199), + rgb(255,255,179), + rgb(190,186,218), + rgb(251,128,114), + rgb(128,177,211), + rgb(253,180,98), + rgb(179,222,105), + rgb(252,205,229), + rgb(217,217,217), + rgb(188,128,189), + rgb(204,235,197), + rgb(255,237,111)] + + colors = [component for color in color_list for component in color] + + return Texture1D(len(colors) / 4, colors) + +def createSeismicScale(): + color_list = [rgb(0, 0, 255), rgb(255, 255, 255), rgb(255, 0, 0)] + colors = [component for color in color_list for component in color] + + return Texture1D(len(colors) / 4, colors, wrap=GL_CLAMP_TO_EDGE) + +def createLinearGreyScale(): + color_list = [rgb(128, 128, 128), rgb(255, 255, 255)] + colors = [component for color in color_list for component in color] + + return Texture1D(len(colors) / 4, colors, wrap=GL_CLAMP_TO_EDGE) + +def createRainbowScale(): + color_list = [rgb(200, 0, 255), rgb(0, 0, 255), rgb(0, 255, 0), rgb(255, 255, 0), rgb(255, 127, 0), rgb(255, 0, 0)] + colors = [component for color in color_list for component in color] + + return Texture1D(len(colors) / 4, colors, wrap=GL_CLAMP_TO_EDGE, internal_format=GL_RGBA8) + +def createColorScales(): + return { + "region_colors": createColorBrewerScale(), + "seismic": createSeismicScale(), + "linear_grey": createLinearGreyScale(), + "rainbow": createRainbowScale() + } + + +def loadFaults(grid , fault_file): + faults = FaultCollection( grid ) + faults.load( fault_file ) + try: + faults.load( fault_file ) + except Exception as e: + traceback.print_tb(e) + print("Loading from fault file:%s failed" % fault_file) + + return faults + + + +def createDataStructures(grid_path=None, grid_data_path=None , polyline_root_path = None): + if grid_path is not None: + nx, ny, nz, grid_data, bounds, grid = loadGridData(grid_path) + data, data_range = loadKWData(grid_data_path, "FLTBLCK", ecl_type=EclTypeEnum.ECL_INT_TYPE) + faults = loadFaults( grid , os.path.join(polyline_root_path , "faults.grdecl")) + else: + # nx, ny, nz, grid_data, bounds = loadGridData("/Volumes/Statoil/data/faultregion/grid.grdecl") + # data, data_range = loadKWData("/Volumes/Statoil/data/faultregion/fltblck.grdecl", "FLTBLCK", ecl_type=EclTypeEnum.ECL_INT_TYPE) + + nx, ny, nz, grid_data, bounds, grid = loadGridData("/Volumes/Statoil/data/TestCase/eclipse/include/example_grid_sim.GRDECL") + data, data_range = loadKWData("/Volumes/Statoil/data/TestCase/eclipse/include/example_permx.GRDECL", "PERMX", ecl_type=EclTypeEnum.ECL_FLOAT_TYPE) + faults = loadFaults( grid , os.path.join("/Volumes/Statoil/data/TestCase/eclipse/include" , "example_faults_sim.GRDECL")) + + grid_texture = Texture3D(nx, ny, nz, grid_data, GL_RGBA32F, GL_RGBA) + attribute_texture = Texture3D(nx, ny, nz, data) + + + textures = {"grid": grid_texture, + "grid_data": attribute_texture} + + return textures, bounds, nx, ny, nz, data_range , faults + + +def readPolylines(root_path): + polyline_files = ["pol1.xyz", + "pol2.xyz", + "pol3.xyz", + "pol4.xyz", + "pol5.xyz", + "pol6.xyz", + "pol7.xyz", + "pol8.xyz", + "pol9.xyz", + "pol10.xyz", + "pol11.xyz"] + + polylines = [] + + if root_path is not None and os.path.exists(root_path): + for polyline_file in polyline_files: + path = os.path.join(root_path, polyline_file) + polyline = XYZIo.readXYZFile(path) + polylines.append(polyline) + + return polylines + +if __name__ == '__main__': + + grid_path = None + grid_data_path = None + polyline_root_path = None + + if len(sys.argv) == 4: + grid_path = sys.argv[1] + grid_data_path = sys.argv[2] + polyline_root_path = sys.argv[3] + + app = QApplication(["Slice Viewer"]) + window = QMainWindow() + window.resize(1024, 768) + + textures, bounds, nx, ny, nz, data_range , faults = createDataStructures(grid_path, grid_data_path , polyline_root_path) + + + polylines = readPolylines(root_path=polyline_root_path) + + color_scales = createColorScales() + textures["color_scale"] = color_scales[color_scales.keys()[0]] + + viewer = SliceViewer(textures=textures, volume_bounds=bounds, color_scales=color_scales, data_range=data_range, polylines=polylines , faults = faults) + viewer.setSliceSize(width=nx, height=ny) + + slice_settings = SliceSettingsWidget(max_slice_count=nz, color_scales=color_scales.keys()) + slice_settings.inactiveCellsHidden.connect(viewer.hideInactiveCells) + slice_settings.currentSliceChanged.connect(viewer.setCurrentSlice) + slice_settings.toggleOrthographicProjection.connect(viewer.useOrthographicProjection) + slice_settings.toggleLighting.connect(viewer.useLighting) + slice_settings.colorScalesChanged.connect(viewer.changeColorScale) + slice_settings.regionToggling.connect(viewer.useRegionScaling) + slice_settings.toggleInterpolation.connect(viewer.useInterpolationOnData) + slice_settings.mirrorX.connect(viewer.mirrorX) + slice_settings.mirrorY.connect(viewer.mirrorY) + slice_settings.mirrorZ.connect(viewer.mirrorZ) + slice_settings.toggleFlatPolylines.connect(viewer.toggleFlatPolylines) + + + dock_widget = QDockWidget("Settings") + dock_widget.setObjectName("SliceSettingsDock") + dock_widget.setWidget(slice_settings) + dock_widget.setAllowedAreas(Qt.AllDockWidgetAreas) + dock_widget.setFeatures(QDockWidget.NoDockWidgetFeatures) + + window.addDockWidget(Qt.LeftDockWidgetArea, dock_widget) + + + window.setCentralWidget(viewer) + + window.show() + window.activateWindow() + window.raise_() + app.exec_() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer_widget.py new file mode 100644 index 0000000000..b572723281 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/slice_viewer_widget.py @@ -0,0 +1,305 @@ +import os +from OpenGL.GL import * +from PyQt4.QtCore import Qt +from PyQt4.QtOpenGL import QGLWidget +from ert_gui.viewer import ShaderSource, Texture3D, ShaderProgram, VertexBufferObject, Bounds, Camera +from ert_gui.viewer.polyline_drawer import PolylineDrawer + + +class SliceViewer(QGLWidget): + + + def __init__(self, textures=None, volume_bounds=None, color_scales=None, data_range=None, polylines=None, faults = None , parent=None): + """ + @type textures: dict of (str, Texture3D) + @type volume_bounds: Bounds + """ + super(SliceViewer, self).__init__(parent=parent) + + self.__width = 1.0 + self.__height = 1.0 + + self.__shader = self.createShader() + + + if textures is not None: + self.__textures = textures + else: + self.__textures = {} + + if color_scales is not None: + self.__color_scales = color_scales + else: + self.__color_scales = {} + + if volume_bounds is None: + self.__volume_bounds = Bounds() + self.__volume_bounds.addPoint(0, 0, 0) + self.__volume_bounds.addPoint(1, 1, 1) + else: + self.__volume_bounds = volume_bounds + + if data_range is None: + self.__data_range = 1.0 + else: + self.__data_range = data_range + + if polylines is None: + self.__polylines = [] + else: + self.__polylines = polylines + + if faults is None: + self.__faults = [ ] + else: + self.__faults = faults + + + self.__current_slice = 0 + + + self.__layer_count = 1 + self.__step_size = 1.0 + + if "grid" in self.__textures: + texture = self.__textures["grid"] + self.__layer_count = texture.getDepth() + self.__step_size = 1.0 / self.__layer_count + self.__vbo = VertexBufferObject() + self.__vbo.createGrid(texture.getWidth(), texture.getHeight()) + + + self.__camera = Camera() + self.__mouse = {} + + self.__hide_inactive_cells = False + self.__lighting = False + self.__region_scaling = False + self.__flat_polylines = False + + + + def createShader(self): + vp = self.createShaderSource("default.vp") + fp = self.createShaderSource("texturing.fp") + + shader = ShaderProgram("Slicer") + shader.addShaderSource(vp) + shader.addShaderSource(fp) + + return shader + + + def paintGL(self): + glPushMatrix() + glPushAttrib(GL_ALL_ATTRIB_BITS) + + glClear(GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT) + + self.__shader.bindProgram() + + z = (self.__current_slice * self.__step_size) + (self.__step_size / 2.0) + + index = 0 + for key, texture in self.__textures.iteritems(): + glActiveTexture(GL_TEXTURE0 + index) + texture.bind() + self.__shader.setUniformi(key, index) + + glMatrixMode(GL_TEXTURE) + glLoadIdentity() + glTranslate(0.0, 0.0, z) + + + glMatrixMode(GL_MODELVIEW) + index += 1 + + + if "grid" in self.__textures: + texture = self.__textures["grid"] + self.__shader.setUniformi("grid_size", texture.getWidth(), texture.getHeight(), texture.getDepth()) + + self.__shader.setUniformi("hide_inactive_cells", 1 if self.__hide_inactive_cells else 0) + self.__shader.setUniformi("lighting", 1 if self.__lighting else 0) + self.__shader.setUniformi("region_scaling", 1 if self.__region_scaling else 0) + self.__shader.setUniformf("data_range", self.__data_range) + + glMatrixMode(GL_MODELVIEW) + glLoadIdentity() + + self.__camera.applyCamera() + + + glScalef(1.0 / self.__volume_bounds.diffX, 1.0 / self.__volume_bounds.diffY, 1.0) + glScalef(1.0, 1.0, 1.0 / self.__volume_bounds.diffZ) + + glTranslate(-self.__volume_bounds.minX - self.__volume_bounds.diffX / 2.0, -self.__volume_bounds.minY - self.__volume_bounds.diffY / 2.0, 0) + glTranslate(0, 0, -self.__volume_bounds.minZ - self.__volume_bounds.diffZ / 2.0) + + glTranslate(-0.5, -0.5, 0.0) + + + self.__vbo.draw() + + + index = 0 + for key, texture in self.__textures.iteritems(): + glActiveTexture(GL_TEXTURE0 + index) + texture.unbind() + index += 1 + + self.__shader.unbindProgram() + + for polyline in self.__polylines: + if self.__flat_polylines: + PolylineDrawer.drawPolylineFlat(polyline, self.__volume_bounds.minZ) + else: + PolylineDrawer.drawPolyline(polyline) + + + for fault in self.__faults: + layer = fault[8] + for fault_line in layer: + + polyline = fault_line.getPolyline() + if self.__flat_polylines: + PolylineDrawer.drawPolylineFlat(polyline, self.__volume_bounds.minZ) + else: + PolylineDrawer.drawPolyline(polyline) + + + glPopAttrib() + glPopMatrix() + + + + def resizeGL(self, width, height): + self.__camera.setupProjection(width, height) + + + def initializeGL(self): + print("OpenGL version %s" % glGetString(GL_VERSION)) + + glClearColor(0.0, 0.0, 0.0, 1.0) + glHint(GL_PERSPECTIVE_CORRECTION_HINT, GL_NICEST) + glDisable(GL_LIGHTING) + # glClearDepth(1.0) + # glEnable(GL_BLEND) + # glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA) + # glEnable(GL_NORMALIZE) + glEnable(GL_DEPTH_TEST) + # glShadeModel(GL_SMOOTH) + + print("Has non power of two support: %s" % extensions.hasGLExtension("GL_ARB_texture_non_power_of_two")) + + print("GL_MAX_VERTEX_TEXTURE_IMAGE_UNITS %d" % glGetIntegerv(GL_MAX_VERTEX_TEXTURE_IMAGE_UNITS)) + print("GL_MAX_COMBINED_TEXTURE_IMAGE_UNITS %d" % glGetIntegerv(GL_MAX_COMBINED_TEXTURE_IMAGE_UNITS)) + + + def setSliceSize(self, width=1.0, height=1.0): + """ Aspect of rectangle on screen """ + + if width > height: + self.__width = 1.0 + self.__height = float(height) / width + else: + self.__width = float(width) / height + self.__height = 1.0 + + def createShaderSource(self, shader_path): + root_path = os.getenv("ERT_SHARE_PATH") + root_path = os.path.join(root_path, "viewer/shaders") + path = os.path.join(root_path, shader_path) + return ShaderSource(path) + + def wheelEvent(self, q_wheel_event): + delta = q_wheel_event.delta() / 120.0 + + self.__camera.adjustZoom(delta / 10.0) + + self.updateGL() + + def mouseMoveEvent(self, q_mouse_event): + """@type q_mouse_event: QMouseEvent""" + if q_mouse_event.buttons() & Qt.LeftButton == Qt.LeftButton: + if "x" in self.__mouse and "y" in self.__mouse: + diff_x = q_mouse_event.x() - self.__mouse["x"] + diff_y = q_mouse_event.y() - self.__mouse["y"] + + self.__camera.rotate(diff_y, diff_x) + + self.__mouse["x"] = q_mouse_event.x() + self.__mouse["y"] = q_mouse_event.y() + + if q_mouse_event.buttons() & Qt.RightButton == Qt.RightButton: + if "x" in self.__mouse and "y" in self.__mouse: + diff_x = q_mouse_event.x() - self.__mouse["x"] + diff_y = q_mouse_event.y() - self.__mouse["y"] + + self.__camera.rotate(0.0, 0.0, diff_y / 2.0) + + self.__mouse["x"] = q_mouse_event.x() + self.__mouse["y"] = q_mouse_event.y() + + self.updateGL() + + def mouseReleaseEvent(self, q_mouse_event): + """@type q_mouse_event: QMouseEvent""" + self.__mouse.clear() + + def mousePressEvent(self, q_mouse_event): + """@type q_mouse_event: QMouseEvent""" + if q_mouse_event.buttons() & Qt.MiddleButton == Qt.MiddleButton: + self.__camera.resetCamera() + self.updateGL() + + + def hideInactiveCells(self, hide): + self.__hide_inactive_cells = hide + self.updateGL() + + def setCurrentSlice(self, slice_number): + self.__current_slice = slice_number + self.updateGL() + + def useOrthographicProjection(self, on): + self.__camera.useOrthographicProjection(on) + self.updateGL() + + def useLighting(self, on): + self.__lighting = on + self.updateGL() + + def changeColorScale(self, color_scale): + color_scale = str(color_scale) + self.__textures["color_scale"] = self.__color_scales[color_scale] + self.updateGL() + + def useRegionScaling(self, on): + self.__region_scaling = on + self.updateGL() + + def useInterpolationOnData(self, interpolate): + if "grid_data" in self.__textures: + if interpolate: + self.__textures["grid_data"].setFilterMode(GL_LINEAR) + else: + self.__textures["grid_data"].setFilterMode(GL_NEAREST) + + self.updateGL() + + def mirrorX(self, on): + self.__camera.mirrorX(on) + self.updateGL() + + def mirrorY(self, on): + self.__camera.mirrorY(on) + self.updateGL() + + def mirrorZ(self, on): + self.__camera.mirrorZ(on) + self.updateGL() + + def toggleFlatPolylines(self, on): + self.__flat_polylines = on + self.updateGL() diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/texture.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/texture.py new file mode 100644 index 0000000000..41f478a60c --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/texture.py @@ -0,0 +1,165 @@ +from OpenGL.GL import * +from ert_gui.viewer import GLTools + + +class Texture3D(object): + def __init__(self, width=64, height=64, depth=64, data=None, internal_format=GL_ALPHA16, pixel_format=GL_ALPHA, pixel_type=GL_FLOAT): + super(Texture3D, self).__init__() + + self.__width = width + self.__height = height + self.__depth = depth + + self.__internal_format = internal_format + self.__pixel_format = pixel_format + self.__pixel_type = pixel_type + self.__filter_mode = GL_NEAREST + + self.__texture_reference = None + + self.__data = data + + self.__data_changed = data is not None + + + def bind(self): + glEnable(GL_TEXTURE_3D) + + if self.__texture_reference is None: + self.createTexture() + + if self.__data_changed: + self.uploadData() + + + glBindTexture(GL_TEXTURE_3D, self.__texture_reference) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_MAG_FILTER, self.__filter_mode) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_MIN_FILTER, self.__filter_mode) #GL_LINEAR or GL_NEAREST + GLTools.checkForGLError() + + + def unbind(self): + glBindTexture(GL_TEXTURE_3D, 0) + + + def createTexture(self): + glEnable(GL_TEXTURE_3D) + + self.__texture_reference = glGenTextures(1) + + glBindTexture(GL_TEXTURE_3D, self.__texture_reference) + + # glPixelStorei(GL_UNPACK_ALIGNMENT, 1) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_WRAP_R, GL_CLAMP_TO_EDGE) + # glTexParameterfv(GL_TEXTURE_3D, GL_TEXTURE_BORDER_COLOR, [0, 0, 0, 0]) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_MAG_FILTER, self.__filter_mode) + glTexParameteri(GL_TEXTURE_3D, GL_TEXTURE_MIN_FILTER, self.__filter_mode) #GL_LINEAR or GL_NEAREST + + GLTools.checkForGLError() + + glTexImage3D(GL_TEXTURE_3D, 0, self.__internal_format, self.__width, self.__height, self.__depth, 0, self.__pixel_format, self.__pixel_type, None) + + GLTools.checkForGLError() + + glBindTexture(GL_TEXTURE_3D, 0) + + + def uploadData(self): + glBindTexture(GL_TEXTURE_3D, self.__texture_reference) + glTexSubImage3D(GL_TEXTURE_3D, 0, 0, 0, 0, self.__width, self.__height, self.__depth, self.__pixel_format, self.__pixel_type, self.__data) + GLTools.checkForGLError() + glBindTexture(GL_TEXTURE_3D, 0) + self.__data_changed = False + + + def setData(self, data): + self.__data_changed = True + self.__data = data + + def getWidth(self): + return self.__width + + def getHeight(self): + return self.__height + + def getDepth(self): + return self.__depth + + def setFilterMode(self, mode): + self.__filter_mode = mode + + + +class Texture1D(object): + def __init__(self, width=64, data=None, internal_format=GL_RGBA16F, pixel_format=GL_RGBA, pixel_type=GL_FLOAT, wrap=GL_REPEAT): + super(Texture1D, self).__init__() + + self.__width = width + + self.__internal_format = internal_format + self.__pixel_format = pixel_format + self.__pixel_type = pixel_type + self.__wrap = wrap + + self.__texture_reference = None + + self.__data = data + + self.__data_changed = data is not None + + + def bind(self): + glEnable(GL_TEXTURE_1D) + + if self.__texture_reference is None: + self.createTexture() + + if self.__data_changed: + self.uploadData() + + + glBindTexture(GL_TEXTURE_1D, self.__texture_reference) + GLTools.checkForGLError() + + + def unbind(self): + glBindTexture(GL_TEXTURE_1D, 0) + + + def createTexture(self): + glEnable(GL_TEXTURE_1D) + + self.__texture_reference = glGenTextures(1) + + glBindTexture(GL_TEXTURE_1D, self.__texture_reference) + + # glPixelStorei(GL_UNPACK_ALIGNMENT, 1) + glTexParameteri(GL_TEXTURE_1D, GL_TEXTURE_WRAP_S, self.__wrap) + glTexParameteri(GL_TEXTURE_1D, GL_TEXTURE_MAG_FILTER, GL_LINEAR) + glTexParameteri(GL_TEXTURE_1D, GL_TEXTURE_MIN_FILTER, GL_LINEAR) #GL_LINEAR or GL_NEAREST + + GLTools.checkForGLError() + + glTexImage1D(GL_TEXTURE_1D, 0, self.__internal_format, self.__width, 0, self.__pixel_format, self.__pixel_type, None) + + GLTools.checkForGLError() + + glBindTexture(GL_TEXTURE_1D, 0) + + + def uploadData(self): + glBindTexture(GL_TEXTURE_1D, self.__texture_reference) + glTexSubImage1D(GL_TEXTURE_1D, 0, 0, self.__width, self.__pixel_format, self.__pixel_type, self.__data) + GLTools.checkForGLError() + glBindTexture(GL_TEXTURE_1D, 0) + self.__data_changed = False + + + def setData(self, data): + self.__data_changed = True + self.__data = data + + def getWidth(self): + return self.__width diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/unity_quaternion.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/unity_quaternion.py new file mode 100644 index 0000000000..ebc1a189cf --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/unity_quaternion.py @@ -0,0 +1,50 @@ +from math import sqrt, pi, cos, sin, acos + + +class UnityQuaternion(object): + + rad2deg = 180.0 / pi + deg2rad = pi / 180.0 + + def __init__(self, angle, x, y, z): + super(UnityQuaternion, self).__init__() + + length = sqrt(x * x + y * y + z * z) + c = cos(angle * UnityQuaternion.deg2rad / 2.0) + s = sin(angle * UnityQuaternion.deg2rad / 2.0) / length + + self.W = c + self.X = x * s + self.Y = y * s + self.Z = z * s + + + def __mul__(self, other): + w = self.W * other.W - self.X * other.X - self.Y * other.Y - self.Z * other.Z + x = self.W * other.X + self.X * other.W + self.Y * other.Z - self.Z * other.Y + y = self.W * other.Y - self.X * other.Z + self.Y * other.W + self.Z * other.X + z = self.W * other.Z + self.X * other.Y - self.Y * other.X + self.Z * other.W + + result = UnityQuaternion(0.0, 1.0, 0.0, 0.0) + result.W = w + result.X = x + result.Y = y + result.Z = z + + result.normalize() + return result + + + def normalize(self): + length = sqrt(self.W * self.W + self.X * self.X + self.Y * self.Y + self.Z * self.Z) + self.W /= length + self.X /= length + self.Y /= length + self.Z /= length + + def getAngleAsDegrees(self): + return UnityQuaternion.rad2deg * 2.0 * acos(self.W) + + def __str__(self): + return "%f degrees around (%f, %f, %f)" % (self.getAngleAsDegrees(), self.X, self.Y, self.Z) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/viewer/vertex_buffer_object.py b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/vertex_buffer_object.py new file mode 100644 index 0000000000..b1a2e67f54 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/viewer/vertex_buffer_object.py @@ -0,0 +1,91 @@ +from OpenGL.GL import * +import numpy +from ert_gui.viewer import GLTools + + +class VertexBufferObject(object): + def __init__(self): + super(VertexBufferObject, self).__init__() + + self.__vertex_buffer_object = None + self.__texture_buffer_object = None + + self.__vertices = [] + self.__texture_coordinates = [] + + self.__data_changed = False + + + def bind(self): + if self.__vertex_buffer_object is None: + self.createVertexBufferObject() + + if self.__data_changed: + self.uploadData() + + glBindBuffer(GL_ARRAY_BUFFER, self.__vertex_buffer_object) + glVertexPointer(3, GL_FLOAT, 0, None) + + glBindBuffer(GL_ARRAY_BUFFER, self.__texture_buffer_object) + glTexCoordPointer(3, GL_FLOAT, 0, None) + + + + def createVertexBufferObject(self): + self.__vertex_buffer_object = glGenBuffers(1) + self.__texture_buffer_object = glGenBuffers(1) + GLTools.checkForGLError() + + + def uploadData(self): + glBindBuffer(GL_ARRAY_BUFFER, self.__vertex_buffer_object) + buffer = numpy.array(self.__vertices, dtype="f") + glBufferData(GL_ARRAY_BUFFER, buffer, GL_STATIC_DRAW) + + glBindBuffer(GL_ARRAY_BUFFER, self.__texture_buffer_object) + buffer = numpy.array(self.__texture_coordinates, dtype="f") + glBufferData(GL_ARRAY_BUFFER, buffer, GL_STATIC_DRAW) + + self.__data_changed = False + GLTools.checkForGLError() + + + def draw(self): + glEnableClientState(GL_VERTEX_ARRAY) + glEnableClientState(GL_TEXTURE_COORD_ARRAY) + glClientActiveTexture(GL_TEXTURE0) + + self.bind() + glDrawArrays(GL_QUADS, 0, len(self.__vertices) / 3) + + glDisableClientState(GL_VERTEX_ARRAY) + glDisableClientState(GL_TEXTURE_COORD_ARRAY) + + + def addTexturedVertex(self, x, y, z): + self.__vertices.append(x) + self.__vertices.append(y) + self.__vertices.append(z) + self.__texture_coordinates.append(x) + self.__texture_coordinates.append(y) + self.__texture_coordinates.append(z) + + self.__data_changed = True + + + def createGrid(self, nx, ny): + for j in range(ny): + for i in range(nx): + p1 = self.xyz(i, j, nx, ny) + p2 = self.xyz(i, j + 1, nx, ny) + p3 = self.xyz(i + 1, j + 1, nx, ny) + p4 = self.xyz(i + 1, j, nx, ny) + + self.addTexturedVertex(*p1) + self.addTexturedVertex(*p2) + self.addTexturedVertex(*p3) + self.addTexturedVertex(*p4) + + + def xyz(self, i, j, nx, ny): + return float(i) / float(nx - 1), float(j) / float(ny - 1), float(0.0) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/CMakeLists.txt index fdeab1ee5f..21ed5cf0ad 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/CMakeLists.txt @@ -11,12 +11,12 @@ set(PYTHON_SOURCES double_box.py double_spinner.py error_popup.py - help_dock.py helped_widget.py integer_spinner.py keyword_list.py keyword_table.py legend.py + list_spin_box.py path_chooser.py path_format.py progress.py @@ -29,6 +29,7 @@ set(PYTHON_SOURCES util.py validated_dialog.py warning_panel.py + workflow_dialog.py ) add_python_package("python.ert_gui.widgets" ${PYTHON_INSTALL_PREFIX}/ert_gui/widgets "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/checkbox.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/checkbox.py index 1f20d2aff7..ac5e78ee3a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/checkbox.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/checkbox.py @@ -15,50 +15,54 @@ # for more details. -# from PyQt4 import QtGui, QtCore -# from helpedwidget import * -# -# class CheckBox(HelpedWidget): -# """A checbox widget for booleans. The data structure expected and sent to the getter and setter is a boolean.""" -# -# def __init__(self, parent=None, checkLabel="Do this", help="", altLabel="", defaultCheckState=True): -# """Construct a checkbox widget for booleans""" -# HelpedWidget.__init__(self, parent, checkLabel, help) -# -# if altLabel: -# self.check = QtGui.QCheckBox(altLabel, self) -# else: -# self.check = QtGui.QCheckBox(checkLabel, self) -# -# self.check.setTristate(False) -# -# if defaultCheckState: -# self.check.setCheckState(QtCore.Qt.Checked) -# else: -# self.check.setCheckState(QtCore.Qt.Unchecked) -# -# -# self.addWidget(self.check) -# -# self.addStretch() -# self.addHelpButton() -# -# #self.connect(self.spinner, QtCore.SIGNAL('valueChanged(int)'), self.updateContent) -# self.connect(self.check, QtCore.SIGNAL('stateChanged(int)'), self.contentsChanged) -# -# -# def contentsChanged(self): -# """Called whenever the contents of the checbox changes.""" -# if self.check.checkState() == QtCore.Qt.Checked: -# self.updateContent(True) -# else: -# self.updateContent(False) -# -# -# def fetchContent(self): -# """Retrieves data from the model and inserts it into the checkbox""" -# if self.getFromModel(): -# self.check.setCheckState(QtCore.Qt.Checked) -# else: -# self.check.setCheckState(QtCore.Qt.Unchecked) +from PyQt4 import QtCore +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QCheckBox, QHBoxLayout + +from ert_gui.models.mixins import BooleanModelMixin +from ert_gui.widgets.helped_widget import HelpedWidget + + +class CheckBox(HelpedWidget): + """A checbox widget for booleans. The data structure expected and sent to the getter and setter is a boolean.""" + + def __init__(self, model, check_label="Do this", help_link="", show_label = True, alt_label=None, default_check_state=True): + """Construct a checkbox widget for booleans""" + HelpedWidget.__init__(self, check_label, help_link) + + if show_label: + if alt_label != None: + self.check = QCheckBox(alt_label, self) + else: + self.check = QCheckBox(check_label,self) + else: + self.check = QCheckBox(self) + + self.check.setTristate(False) + self.check.setChecked(default_check_state) + self.connect(self.check, QtCore.SIGNAL('stateChanged(int)'), self.contentsChanged) + + if not show_label: + layout = QHBoxLayout() + layout.addWidget(self.check) + layout.setAlignment(Qt.AlignCenter) + layout.setContentsMargins(0, 0, 0, 0) + self.addLayout(layout) + else: + self.addWidget(self.check) + + assert isinstance(model, BooleanModelMixin) + self.model = model + self.model.observable().attach(BooleanModelMixin.BOOLEAN_VALUE_CHANGED_EVENT, self.modelChanged) + self.modelChanged() + + + def contentsChanged(self): + """Called whenever the contents of the checbox changes.""" + self.model.setTrue(self.check.isChecked()) + + + def modelChanged(self): + """Retrives data from the model and sets the state of the checkbox.""" + self.check.setChecked(self.model.isTrue()) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/closable_dialog.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/closable_dialog.py index 8203ea0408..9db2529b65 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/closable_dialog.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/closable_dialog.py @@ -1,5 +1,21 @@ -from PyQt4.QtCore import Qt, SIGNAL, pyqtSlot, SLOT -from PyQt4.QtGui import QWidget, QDialog, QVBoxLayout, QLayout, QPushButton, QHBoxLayout +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'closable_dialog.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from PyQt4.QtCore import Qt, QString, QRegExp +from PyQt4.QtGui import QDialog, QVBoxLayout, QLayout, QPushButton, QHBoxLayout class ClosableDialog(QDialog): @@ -11,20 +27,22 @@ def __init__(self, title, widget, parent=None): self.setModal(True) self.setWindowFlags(self.windowFlags() & ~Qt.WindowContextHelpButtonHint) self.setWindowFlags(self.windowFlags() & ~Qt.WindowCloseButtonHint) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowCancelButtonHint) layout = QVBoxLayout() layout.setSizeConstraint(QLayout.SetFixedSize) # not resizable!!! layout.addWidget(widget) - button_layout = QHBoxLayout() + self.__button_layout = QHBoxLayout() self.close_button = QPushButton("Close") + self.close_button.setObjectName("CLOSE") self.close_button.clicked.connect(self.accept) - button_layout.addStretch() - button_layout.addWidget(self.close_button) + self.__button_layout.addStretch() + self.__button_layout.addWidget(self.close_button) layout.addStretch() - layout.addLayout(button_layout) + layout.addLayout(self.__button_layout) self.setLayout(layout) @@ -41,3 +59,15 @@ def keyPressEvent(self, q_key_event): else: QDialog.keyPressEvent(self, q_key_event) + def addButton(self, caption, listner): + button = QPushButton(caption) + button.setObjectName(str(caption).capitalize()) + self.__button_layout.insertWidget(1,button) + button.clicked.connect(listner) + + def toggleButton(self, caption, enabled): + button = self.findChild(QPushButton,str(caption).capitalize()) + if button is not None: + button.setEnabled(enabled) + + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/help_dock.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/help_dock.py deleted file mode 100644 index 10ca77286b..0000000000 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/help_dock.py +++ /dev/null @@ -1,139 +0,0 @@ -from PyQt4.QtCore import Qt, SIGNAL -from PyQt4.QtGui import QDockWidget, QLabel, QWidget, QVBoxLayout - -import os -from ert_gui.pages.message_center import MessageCenter - - -class HelpDock(QDockWidget): - __instance = None - help_prefix = None - default_help_string = "No help available!" - validation_template = ("" - "" - "" - "" - "
Notice:
%s
" - "") - - def __init__(self): - QDockWidget.__init__(self, "Help") - self.setObjectName("HelpDock") - - widget = QWidget() - widget.setStyleSheet("background-color: #ffffe0") - layout = QVBoxLayout() - widget.setLayout(layout) - - self.link_widget = QLabel() - self.link_widget.setStyleSheet("font-weight: bold") - self.link_widget.setMinimumHeight(20) - - self.help_widget = QLabel(HelpDock.default_help_string) - self.help_widget.setWordWrap(True) - self.help_widget.setTextFormat(Qt.RichText) - - self.validation_widget = QLabel("") - self.validation_widget.setWordWrap(True) - self.validation_widget.setScaledContents(True) - self.validation_widget.setAlignment(Qt.AlignHCenter) - self.validation_widget.setTextFormat(Qt.RichText) - - - layout.addWidget(self.link_widget) - layout.addWidget(self.help_widget) - layout.addStretch(1) - layout.addWidget(self.validation_widget) - - self.setWidget(widget) - - self.help_messages = {} - - MessageCenter().addHelpMessageListeners(self) - - def __new__(cls): - if cls.__instance is None: - cls.__instance = QDockWidget.__new__(cls) - return cls.__instance - return None - - - @classmethod - def getInstance(cls): - """ @rtype: HelpDock """ - if cls.__instance is None: - cls() - - return cls.__instance - - @classmethod - def setHelpMessageLink(cls, help_link): - instance = cls.getInstance() - if not help_link in instance.help_messages: - help_message = HelpDock.resolveHelpLink(help_link) - if help_message is not None: - instance.help_messages[help_link] = help_message - else: - instance.help_messages[help_link] = instance.default_help_string - - instance.link_widget.setText(help_link) - instance.help_widget.setText(instance.help_messages[help_link]) - instance.validation_widget.setText("") - - @classmethod - def setValidationMessage(cls, message): - instance = cls.getInstance() - instance.validation_widget.setHidden(message is None) - instance.validation_widget.setText(instance.validation_template % message) - - - # The setHelpLinkPrefix should be set to point to a directory - # containing (directories) with html help files. In the current - # implementation this variable is set from the gert_main.py script. - @classmethod - def setHelpLinkPrefix(cls, prefix): - cls.help_prefix = prefix - - @classmethod - def getTemplate(cls): - path = cls.help_prefix + "template.html" - if os.path.exists(path) and os.path.isfile(path): - f = open(path, 'r') - template = f.read() - f.close() - return template - else: - return "%s" - - @classmethod - def resolveHelpLink(cls, help_link): - """ - Reads a HTML file from the help directory. - The HTML must follow the specification allowed by QT here: http://doc.trolltech.com/4.6/richtext-html-subset.html - """ - - # This code can be used to find widgets with empty help labels - # if label.strip() == "": - # raise AssertionError("NOOOOOOOOOOOOOOOOOOOOO!!!!!!!!!!!!") - - path = cls.help_prefix + help_link + ".html" - if os.path.exists(path) and os.path.isfile(path): - f = open(path, 'r') - help = f.read() - f.close() - return cls.getTemplate() % help - else: - # This code automatically creates empty help files - # sys.stderr.write("Missing help file: '%s'\n" % label) - # if not label == "" and not label.find("/") == -1: - # sys.stderr.write("Creating help file: '%s'\n" % label) - # directory, filename = os.path.split(path) - # - # if not os.path.exists(directory): - # os.makedirs(directory) - # - # file_object = open(path, "w") - # file_object.write(label) - # file_object.close() - return None - diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/helped_widget.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/helped_widget.py index 7c9ae4cefb..5bb3aec5e1 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/helped_widget.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/helped_widget.py @@ -1,6 +1,6 @@ from PyQt4.QtCore import QSize, pyqtSignal from PyQt4.QtGui import QWidget, QColor, QLabel, QHBoxLayout, QIcon, QPixmap -from ert_gui.pages.message_center import MessageCenter +from ert_gui.tools import HelpCenter from ert_gui.widgets.error_popup import ErrorPopup from ert_gui.widgets.util import resourceImage @@ -24,10 +24,7 @@ class HelpedWidget(QWidget): def __init__(self, widget_label="", help_link=""): QWidget.__init__(self) - self.validation_label = QLabel() - self.validation_label.setParent(self) - self.validation_label.setMinimumSize(QSize(16, 16)) - self.validation_label.setMaximumSize(QSize(16, 16)) + if not widget_label == "": self.label = widget_label + ":" @@ -40,7 +37,6 @@ def __init__(self, widget_label="", help_link=""): self.widget_layout = QHBoxLayout() self.widget_layout.setMargin(0) - self.widget_layout.addWidget(self.validation_label) self.setLayout(self.widget_layout) self.setMinimumHeight(20) @@ -71,30 +67,26 @@ def setValidationMessage(self, message, validation_type=WARNING): if message == "": self.validation_type = None self.validation_message = None - self.validation_label.setPixmap(QPixmap()) HelpedWidget.__error_popup.hide() self.validationChanged.emit(True) else: self.validation_type = validation_type self.validation_message = message - self.validation_label.setPixmap(resourceImage(validation_type)) HelpedWidget.__error_popup.presentError(self, self.validation_message) self.validationChanged.emit(False) - MessageCenter().setWarning(self, self.validation_message) + # HelpCenter.getHelpCenter("ERT").setHelpMessageLink() + # MessageCenter().setWarning(self, self.validation_message) def isValid(self): return self.validation_message is None - def hideValidationLabel(self): - self.validation_label.setHidden(True) - def enterEvent(self, event): QWidget.enterEvent(self, event) - MessageCenter().setHelpMessageLink(self.help_link) + HelpCenter.getHelpCenter("ERT").setHelpMessageLink(self.help_link) # if HelpedWidget.__error_popup is None: # HelpedWidget.__error_popup = ErrorPopup() @@ -114,5 +106,13 @@ def cleanup(self): """ Remove any model attachment or similar. Called when QT object is destroyed.""" pass + @staticmethod + def addHelpToWidget(widget, link): + original_enter_event = widget.enterEvent + + def enterEvent(event): + original_enter_event(event) + HelpCenter.getHelpCenter("ERT").setHelpMessageLink(link) + widget.enterEvent = enterEvent diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/keyword_list.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/keyword_list.py index af18e014aa..4bbf8e30fb 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/keyword_list.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/keyword_list.py @@ -82,4 +82,9 @@ def modelChanged(self): self.keyword_list = keywords for keyword in keywords: - self.list.addItem(keyword) \ No newline at end of file + self.list.addItem(keyword) + + + def cleanup(self): + self.model.observable().detach(ListModelMixin.LIST_CHANGED_EVENT, self.modelChanged) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/legend.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/legend.py index 2a5d69959c..c7c7221e7e 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/legend.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/legend.py @@ -31,10 +31,12 @@ def __init__(self, legend, color): QWidget.__init__(self) self.setMinimumWidth(140) + self.setMaximumHeight(25) self.legend = legend layout = QHBoxLayout() + layout.setMargin(0) self.legend_marker = LegendMarker(color) self.legend_marker.setToolTip(legend) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/list_spin_box.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/list_spin_box.py new file mode 100644 index 0000000000..0650b5779f --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/list_spin_box.py @@ -0,0 +1,89 @@ +import re +from PyQt4.QtCore import Qt +from PyQt4.QtGui import QSpinBox, QValidator, QLineEdit, QCompleter, QListView, QStringListModel +from ert.util import CTime + + +class ListSpinBox(QSpinBox): + + def __init__(self, items): + QSpinBox.__init__(self) + self.setMinimumWidth(75) + + self.__string_converter = str + self.__items = items + + list = [] + for item in self.__items: + assert isinstance(item, CTime) + date = item.date() + list.append(self.convertToString(date)) + + model = QStringListModel() + model.setStringList(list) + + self.setRange(0, len(items) - 1) + self.setValue(len(items) - 1) + + line_edit = QLineEdit() + self.setLineEdit(line_edit) + + + def convertToString(self, item): + return self.__string_converter(item) + + def setStringConverter(self, string_converter): + self.__string_converter = string_converter + + + def textFromValue(self, value): + if len(self.__items) == 0: + return "" + + if value < 0 or value >= len(self.__items): + value = len(self.__items) - 1 + + return self.convertToString(self.__items[value]) + + + def valueFromText(self, qstring): + text = str(qstring).lower() + + for index in range(len(self.__items)): + value = self.convertToString(self.__items[index]).lower() + if text == value: + return index + + return len(self.__items) - 1 + + + def validate(self, qstring, pos): + text = str(qstring).lower() + + if re.match("^[0-9-]+$", text) is None: + return QValidator.Invalid, pos + + if len(text) < 10: + return QValidator.Intermediate, pos + + for index in range(len(self.__items)): + value = self.convertToString(self.__items[index]).lower() + + if value == text: + return QValidator.Acceptable, len(value) + + if value[0:pos] == text: + return QValidator.Intermediate, pos + + return QValidator.Invalid, pos + + def fixup(self, input): + text = str(input).lower() + + for index in range(len(self.__items)): + value = self.convertToString(self.__items[index]) + + if value.lower().startswith(text.lower()): + input.clear() + input.push_back(value) + diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/row_group.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/row_group.py index 8f8c5239c6..fa7c6c857a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/row_group.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/row_group.py @@ -14,7 +14,7 @@ def __init__(self, label="", help_link=""): widget.setLayout(self.layout) HelpedWidget.addWidget(self, widget) - self.hideValidationLabel() + def addWidget(self, widget): self.layout.addWidget(widget) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/string_box.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/string_box.py index 8db3fe8f59..0c0f0c949a 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/string_box.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/string_box.py @@ -81,6 +81,8 @@ def modelChanged(self): def setValidator(self, validator): self.__validator = validator + def setAlignment(self, flag): + self.box_string.setAlignment(flag) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/warning_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/warning_panel.py index 7f488d1994..c24ce30aa8 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/warning_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/warning_panel.py @@ -1,6 +1,5 @@ from PyQt4.QtCore import Qt, pyqtSlot from PyQt4.QtGui import QLabel -from ert_gui.pages.message_center import MessageCenter from ert_gui.widgets.helped_widget import HelpedWidget @@ -28,8 +27,6 @@ def __init__(self, label="", help_link=""): self.addWidget(self.warning_widget) self.warnings = {} - MessageCenter().addWarningMessageListeners(self) - def setWarning(self, reference, warning): if warning is None: diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/widgets/workflow_dialog.py b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/workflow_dialog.py new file mode 100644 index 0000000000..320eb8a9be --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert_gui/widgets/workflow_dialog.py @@ -0,0 +1,46 @@ +from PyQt4.QtCore import Qt, pyqtSignal +from PyQt4.QtGui import QDialog, QVBoxLayout, QLayout, QPushButton, QHBoxLayout + + +class WorkflowDialog(QDialog): + + closeButtonPressed = pyqtSignal() + + def __init__(self, title, widget, parent=None): + QDialog.__init__(self, parent) + + self.setWindowTitle(title) + self.setModal(True) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowContextHelpButtonHint) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowCloseButtonHint) + self.setWindowFlags(self.windowFlags() & ~Qt.WindowCancelButtonHint) + + + layout = QVBoxLayout() + layout.setSizeConstraint(QLayout.SetFixedSize) # not resizable!!! + layout.addWidget(widget) + + button_layout = QHBoxLayout() + self.close_button = QPushButton("Close") + self.close_button.clicked.connect(self.closeButtonPressed.emit) + button_layout.addStretch() + button_layout.addWidget(self.close_button) + + layout.addStretch() + layout.addLayout(button_layout) + + self.setLayout(layout) + + + def disableCloseButton(self): + self.close_button.setEnabled(False) + + def enableCloseButton(self): + self.close_button.setEnabled(True) + + def keyPressEvent(self, q_key_event): + if not self.close_button.isEnabled() and q_key_event.key() == Qt.Key_Escape: + pass + else: + QDialog.keyPressEvent(self, q_key_event) + diff --git a/ThirdParty/Ert/devel/python/test/CMakeLists.txt b/ThirdParty/Ert/devel/python/test/CMakeLists.txt index 99e78b7b70..fcf4dd45aa 100644 --- a/ThirdParty/Ert/devel/python/test/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/test/CMakeLists.txt @@ -3,7 +3,6 @@ set(RSH_SERVERS "" CACHE STRING "List of nodes which will be used to test the R set(TEST_SOURCES ert_tests/__init__.py - ert_tests/source_enumerator.py ert_tests/run_tests.py ert_tests/test_ert_import.py ert_tests/import_tester.py @@ -15,6 +14,7 @@ set(TEST_SOURCES ert_tests/cwrap/test_cwrap.py ert_tests/ecl/__init__.py + ert_tests/ecl/test_deprecation.py ert_tests/ecl/test_ecl_default.py ert_tests/ecl/test_ecl_file.py ert_tests/ecl/test_ecl_submit.py @@ -28,20 +28,45 @@ set(TEST_SOURCES ert_tests/ecl/test_rft.py ert_tests/ecl/test_rft_cell.py ert_tests/ecl/test_sum.py + ert_tests/ecl/test_ecl_sum_vector.py + ert_tests/ecl/test_faults.py + ert_tests/ecl/test_statoil_faults.py + ert_tests/ecl/test_fault_blocks.py + ert_tests/ecl/test_region_definition_statoil.py + ert_tests/ecl/test_region_definition.py + ert_tests/ecl/test_npv.py + ert_tests/ecl/test_indexed_read.py ert_tests/enkf/__init__.py + ert_tests/enkf/test_ert_context.py ert_tests/enkf/test_enkf.py + ert_tests/enkf/test_enkf_fs.py + ert_tests/enkf/test_enkf_fs_manager1.py + ert_tests/enkf/test_enkf_fs_manager2.py ert_tests/enkf/test_enkf_library.py + ert_tests/enkf/test_enkf_load_results_manually.py ert_tests/enkf/test_analysis_config.py + ert_tests/enkf/test_analysis_iter_config.py ert_tests/enkf/test_state_map.py - + ert_tests/enkf/test_time_map.py + ert_tests/enkf/test_enkf_obs.py + ert_tests/enkf/plot/test_plot_data.py + ert_tests/enkf/data/test_gen_data_config.py + ert_tests/enkf/data/test_gen_kw.py ert_tests/analysis/__init__.py ert_tests/analysis/test_options_enum.py ert_tests/analysis/test_analysis_module.py ert_tests/job_queue/__init__.py + ert_tests/job_queue/test_ert_script.py + ert_tests/job_queue/test_function_ert_script.py ert_tests/job_queue/test_job_queue.py + ert_tests/job_queue/test_workflow.py + ert_tests/job_queue/test_workflow_job.py + ert_tests/job_queue/test_workflow_joblist.py + ert_tests/job_queue/test_workflow_runner.py + ert_tests/job_queue/workflow_common.py ert_tests/sched/__init__.py ert_tests/sched/test_sched.py @@ -55,11 +80,13 @@ set(TEST_SOURCES ert_tests/util/test_string_list.py ert_tests/util/test_vectors.py ert_tests/util/test_ui_return.py + ert_tests/util/test_thread_pool.py ert_tests/gui/__init__.py ert_tests/gui/test_model.py ert_tests/gui/test_observable.py - ert_tests/gui/test_plot_data.py + + ert_tests/gui/plot/test_plot_metrics_tracker.py ert_tests/gui/ide/__init__.py ert_tests/gui/ide/test_bool_argument.py @@ -70,20 +97,34 @@ set(TEST_SOURCES ert_tests/gui/ide/test_ert_keywords.py ert_tests/gui/ide/test_float_argument.py ert_tests/gui/ide/test_integer_argument.py + ert_tests/gui/ide/test_percent_argument.py ert_tests/gui/ide/test_path_argument.py ert_tests/gui/ide/test_path_argument.py ert_tests/gui/ide/test_proper_name_argument.py ert_tests/gui/ide/test_proper_name_format_argument.py + ert_tests/gui/ide/test_proper_name_format_string_argument.py ert_tests/gui/ide/test_range_string_argument.py ert_tests/gui/ide/test_tokens.py ert_tests/gui/ide/wizards/__init__.py ert_tests/gui/ide/wizards/test_tree_structure.py + ert_tests/geometry/__init__.py + ert_tests/geometry/test_polyline.py + ert_tests/geometry/test_intersection.py + ert_tests/geometry/test_convex_hull.py + ert_tests/geometry/test_point_in_polygon.py + ert_tests/geometry/test_polygon_slicing.py + ert_tests/run/__init__.py ert_tests/run/test_run.py + ert_tests/server/test_server.py + ert_tests/server/test_socket.py + + ert_tests/well/test_ecl_well.py + ecl_isosurf.py ens_config_test.py grav_test.py @@ -168,6 +209,31 @@ add_test( NAME python.tests.ert.enkf.enkf WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf.EnKFTest) +add_test( NAME python.tests.ert.enkf.enkf_obs + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_obs.EnKFObsTest) + +add_test( NAME python.tests.ert.enkf.enkf_load_results_manually + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_load_results_manually.LoadResultsManuallyTest) + +add_test( NAME python.tests.ert.enkf.enkf_fs + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_fs.EnKFFSTest) + +add_test( NAME python.tests.ert.enkf.ert_log + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_ert_log.ErtLogTest) + + +add_test( NAME python.tests.ert.enkf.enkf_fs_manager1 + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_fs_manager1.EnKFFSManagerTest1) + +add_test( NAME python.tests.ert.enkf.enkf_fs_manager2 + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_fs_manager2.EnKFFSManagerTest2) + add_test( NAME python.tests.ert.enkf.enkf_library WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_enkf_library.EnKFLibraryTest) @@ -176,14 +242,41 @@ add_test( NAME python.tests.ert.enkf.analysis_config WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_analysis_config.AnalysisConfigTest) +add_test( NAME python.tests.ert.enkf.analysis_iter_config + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_analysis_iter_config.AnalysisIterConfigTest) + add_test( NAME python.tests.ert.enkf.state_map WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_state_map.StateMapTest) +add_test( NAME python.tests.ert.enkf.time_map + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_time_map.TimeMapTest) + add_test( NAME python.tests.ert.enkf.ecl_config WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_ecl_config.EclConfigTest) +add_test( NAME python.tests.ert.enkf.plot.plot_block_data + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.plot.test_plot_data.PlotDataTest) + + +add_test( NAME python.tests.ert.enkf.data.gen_data_config + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.data.test_gen_data_config.GenDataConfigTest) + +add_test( NAME python.tests.ert.enkf.data.gen_kw + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.data.test_gen_kw.GenKwTest) + +add_test( NAME python.tests.ert.enkf.ert_test_context + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_ert_context.ErtTestContextTest) + + + #GUI if (ERT_BUILD_GUI) @@ -195,9 +288,9 @@ if (ERT_BUILD_GUI) WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.test_observable.ObservableTest) - add_test( NAME python.tests.ert_gui.models.plot_data + add_test( NAME python.tests.ert_gui.plot.plot_metrics_tracker WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} - COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.test_plot_data.PlotDataTest) + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.plot.test_plot_metrics_tracker.PlotMetricTrackerTest) add_test( NAME python.tests.ert_gui.ide.bool_argument WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -223,6 +316,10 @@ if (ERT_BUILD_GUI) WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.ide.test_proper_name_format_argument.ProperNameFormatArgumentTest) + add_test( NAME python.tests.ert_gui.ide.proper_name_format_string_argument + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.ide.test_proper_name_format_string_argument.ProperNameFormatStringArgumentTest) + add_test( NAME python.tests.ert_gui.ide.range_string_argument WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.gui.ide.test_range_string_argument.RangeStringArgumentTest) @@ -269,7 +366,7 @@ add_test( NAME python.tests.ert.ecl.ecl_default add_test( NAME python.tests.ert.ecl.ecl_file WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} - COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_ecl_file.FileTest) + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_ecl_file.EclFileTest) add_test( NAME python.tests.ert.ecl.ecl_queue_LOCAL WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -331,8 +428,49 @@ add_test( NAME python.tests.ert.ecl.ecl_sum WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_sum.SumTest) +add_test( NAME python.tests.ert.ecl.ecl_sum_vector + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_ecl_sum_vector.EclSumVectorTest) +add_test( NAME python.tests.ert.ecl.layer + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_layer.LayerTest ) + +add_test( NAME python.tests.ert.ecl.faults + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_faults.FaultTest ) +add_test( NAME python.tests.ert.ecl.fault_blocks + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_fault_blocks.FaultBlockTest ) + +add_test( NAME python.tests.ert.ecl.region_definition_statoil + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_region_definition_statoil.RegionDefinitionTest ) + +add_test( NAME python.tests.ert.ecl.region_definition + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_region_definition.RegionDefinitionTest ) + +add_test( NAME python.tests.ert.ecl.fault_blocks_statoil + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_fault_blocks_statoil.FaultBlockTest ) + +add_test( NAME python.tests.ert.ecl.ecl_npv + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_npv.NPVTest) + +add_test( NAME python.tests.ert.ecl.statoil_faults + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_statoil_faults.StatoilFaultTest ) + +add_test( NAME python.tests.ert.ecl.ecl_deprecation + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_deprecation.DeprecationTest ) + +add_test( NAME python.tests.ert.ecl.indexed_read + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_indexed_read.EclIndexedReadTest ) #SCHED add_test( NAME python.tests.ert.sched.sched @@ -344,12 +482,38 @@ add_test( NAME python.tests.ert.job_queue.job_status_type_enum WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_job_queue.JobQueueTest) +add_test( NAME python.tests.ert.job_queue.workflow_job + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_workflow_job.WorkflowJobTest) + +add_test( NAME python.tests.ert.job_queue.workflow + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_workflow.WorkflowTest) + +add_test( NAME python.tests.ert.job_queue.workflow_joblist + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_workflow_joblist.WorkflowJoblistTest) + +add_test( NAME python.tests.ert.job_queue.ert_script + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_ert_script.ErtScriptTest) + +add_test( NAME python.tests.ert.job_queue.function_ert_script + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_function_ert_script.FunctionErtScriptTest) + +add_test( NAME python.tests.ert.job_queue.workflow_runner + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.job_queue.test_workflow_runner.WorkflowRunnerTest) + + #CONFIG add_test( NAME python.tests.ert.config WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.config.test_config.ConfigTest) + #CWRAP add_test( NAME python.tests.ert.cwrap WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -363,6 +527,11 @@ add_test( NAME python.tests.ert.cwrap.basecenum WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.cwrap.test_basecenum.BaseCEnumTest) +add_test( NAME python.tests.ert.cwrap.basecvalue + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.cwrap.test_basecvalue.BaseCValueTest) + + #TESTRUN add_test( NAME python.tests.ert.test_run WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -379,6 +548,46 @@ add_test( NAME python.tests.ert.analysis.analysis_module +#GEOMETRY + +add_test( NAME python.tests.ert.geometry.polyline + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.geometry.test_polyline.PolylineTest) + +add_test( NAME python.tests.ert.geometry.intersection + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.geometry.test_intersection.IntersectionTest) + +add_test( NAME python.tests.ert.geometry.convex_hull + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.geometry.test_convex_hull.ConvexHullTest) + +add_test( NAME python.tests.ert.geometry.point_in_polygon + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.geometry.test_point_in_polygon.PointInPolygonTest) + +add_test( NAME python.tests.ert.geometry.polygon_slicing + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.geometry.test_polygon_slicing.PolygonSlicingTest) + + +#SERVER + +#add_test( NAME python.tests.ert.server.socket +# WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} +# COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.server.test_socket.SocketTest) + +#add_test( NAME python.tests.ert.server.server +# WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} +# COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.server.test_server.ServerTest) + + +# ECL_WELL +add_test( NAME python.tests.ert.well.ecl_well + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.well.test_ecl_well.EclWellTest) + + set_property( TEST python.tests.ert.sched.sched PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.fortio PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_grdecl PROPERTY LABELS Python:StatoilData ) @@ -387,18 +596,35 @@ set_property( TEST python.tests.ert.ecl.ecl_region PROPERTY LABELS Python set_property( TEST python.tests.ert.ecl.ecl_file PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_queue_LOCAL PROPERTY LABELS Python:StatoilData:Slow ) set_property( TEST python.tests.ert.ecl.ecl_sum PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.ecl_npv PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_kw PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_rft PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.ecl_sum_vector PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.indexed_read PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_grid PROPERTY LABELS Python:StatoilData:Slow ) +set_property( TEST python.tests.ert.ecl.ecl_deprecation PROPERTY LABELS Python ) #set_property( TEST python.tests.import_local PROPERTY LABELS Python:StatoilBuild ) +set_property( TEST python.tests.ert.well.ecl_well PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.test_run PROPERTY LABELS Python) set_property( TEST python.tests.ert.import PROPERTY LABELS Python) set_property( TEST python.tests.ert.util.stringlist PROPERTY LABELS Python ) set_property( TEST python.tests.ert.util.tvector PROPERTY LABELS Python ) - -set_property( TEST python.tests.ert.enkf.enkf PROPERTY LABELS Python:StatoilData ) -set_property( TEST python.tests.ert.enkf.ecl_config PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.faults PROPERTY LABELS Python ) + +set_property( TEST python.tests.ert.ecl.region_definition_statoil PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.fault_blocks_statoil PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.statoil_faults PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.ecl_config PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf_fs PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf_fs_manager1 PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf_fs_manager2 PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf_obs PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.enkf_load_results_manually PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.ert_test_context PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.plot.plot_block_data PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.data.gen_data_config PROPERTY LABELS Python:StatoilData ) if (ERT_BUILD_GUI) set_property( TEST python.tests.ert_gui.import PROPERTY ENVIRONMENT "ERT_SHARE_PATH=${PROJECT_SOURCE_PATH}/share") diff --git a/ThirdParty/Ert/devel/python/test/ctest_import.py b/ThirdParty/Ert/devel/python/test/ctest_import.py index 95c0e3a985..fb64e2845d 100644 --- a/ThirdParty/Ert/devel/python/test/ctest_import.py +++ b/ThirdParty/Ert/devel/python/test/ctest_import.py @@ -1,16 +1,15 @@ import os import sys -from ert_tests.import_tester import ImportTester -if __name__ == '__main__': - PYTHONPATH = sys.argv[1] - package_name = sys.argv[2] +PYTHONPATH = sys.argv[1] +sys.path.insert(0, PYTHONPATH) - sys.path.insert(0, PYTHONPATH) +from ert_tests.import_tester import ImportTester - package_path = os.path.join(PYTHONPATH, package_name) +package_name = sys.argv[2] +package_path = os.path.join(PYTHONPATH, package_name) - if ImportTester.importRecursively(package_path, package_name): - sys.exit(0) - else: - sys.exit(1) +if ImportTester.importRecursively(package_path, package_name): + sys.exit(0) +else: + sys.exit(1) diff --git a/ThirdParty/Ert/devel/python/test/ctest_run.py b/ThirdParty/Ert/devel/python/test/ctest_run.py index 5392ad02a1..f1007fcef3 100644 --- a/ThirdParty/Ert/devel/python/test/ctest_run.py +++ b/ThirdParty/Ert/devel/python/test/ctest_run.py @@ -6,7 +6,10 @@ except ImportError: from unittest import TextTestRunner -from ert_tests.run_tests import getTestsFromTestClass +PYTHONPATH = sys.argv[1] +sys.path.insert(0, PYTHONPATH) + +from ert.test import ErtTestRunner def runTestCase(tests): @@ -27,22 +30,18 @@ def runTestCase(tests): return True -if __name__ == '__main__': - PYTHONPATH = sys.argv[1] - test_class_path = sys.argv[2] - argv = [] - - sys.path.insert(0, PYTHONPATH) +test_class_path = sys.argv[2] +argv = [] - try: - argv = sys.argv[3:] - except IndexError: - pass +try: + argv = sys.argv[3:] +except IndexError: + pass - tests = getTestsFromTestClass(test_class_path, argv) +tests = ErtTestRunner.getTestsFromTestClass(test_class_path, argv) - if runTestCase(tests): - sys.exit(0) - else: - sys.exit(1) +if runTestCase(tests): + sys.exit(0) +else: + sys.exit(1) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/__init__.py index b52890d0df..e69de29bb2 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/__init__.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/__init__.py @@ -1,104 +0,0 @@ -# Copyright (C) 2012 Statoil ASA, Norway. -# -# The file '__init__.py' is part of ERT - Ensemble based Reservoir Tool. -# -# ERT is free software: you can redistribute it and/or modify -# it under the terms of the GNU General Public License as published by -# the Free Software Foundation, either version 3 of the License, or -# (at your option) any later version. -# -# ERT is distributed in the hope that it will be useful, but WITHOUT ANY -# WARRANTY; without even the implied warranty of MERCHANTABILITY or -# FITNESS FOR A PARTICULAR PURPOSE. -# -# See the GNU General Public License at -# for more details. -import numbers -import os -import traceback - -try: - from unittest2 import TestCase -except ImportError: - from unittest import TestCase - -from ert_tests.source_enumerator import SourceEnumerator - - -""" - This class provides some extra functionality for testing values that are almost equal. - """ - - -class ExtendedTestCase(TestCase): - def assertAlmostEqualScaled(self, first, second, msg=None): - if isinstance(first, numbers.Number) and isinstance(second, numbers.Number): - tolerance = 1e-6 - diff = abs(first - second) - scale = max(1, abs(first) + abs(second)) - - self.assertTrue(diff < tolerance * scale, msg=msg) - else: - self.assertTrue(first == second, msg=msg) - - - def assertAlmostEqualList(self, first, second, msg=None): - if len(first) != len(second): - self.fail("Lists are not of same length!") - - for index in range(len(first)): - self.assertAlmostEqualScaled(first[index], second[index], msg=msg) - - def assertImportable(self, module_name): - try: - __import__(module_name) - except ImportError: - tb = traceback.format_exc() - self.fail("Module %s not found!\n\nTrace:\n%s" % (module_name, str(tb))) - except Exception: - tb = traceback.format_exc() - self.fail("Import of module %s caused errors!\n\nTrace:\n%s" % (module_name, str(tb))) - - def assertFilesAreEqual(self, first, second): - if not self.__filesAreEqual(first, second): - self.fail("Buffer contents of files are not identical!") - - def assertFilesAreNotEqual(self, first, second): - if self.__filesAreEqual(first, second): - self.fail("Buffer contents of files are identical!") - - def assertEnumIsFullyDefined(self, enum_class, enum_name, source_path, verbose=False): - enum_values = SourceEnumerator.findEnumerators(enum_name, source_path) - - for identifier, value in enum_values: - if verbose: - print("%s = %d" % (identifier, value)) - - self.assertTrue(enum_class.__dict__.has_key(identifier), "Enum does not have identifier: %s" % identifier) - class_value = enum_class.__dict__[identifier] - self.assertEqual(class_value, value, "Enum value for identifier: %s does not match: %s != %s" % (identifier, class_value, value)) - - - def __filesAreEqual(self, first, second): - buffer1 = open(first).read() - buffer2 = open(second).read() - - return buffer1 == buffer2 - - def createTestPath(self, path): - """ - @param: The test root path can be set by environment variable ERT_TEST_ROOT_PATH - """ - file_path = os.path.realpath(__file__) - default_test_root = os.path.realpath(os.path.join(os.path.dirname(file_path), "../test-data/")) - test_root = os.path.realpath(os.environ.get("ERT_TEST_ROOT_PATH", default_test_root)) - - return os.path.realpath(os.path.join(test_root, path)) - - @staticmethod - def slowTestShouldNotRun(): - """ - @param: The slow test flag can be set by environment variable SKIP_SLOW_TESTS = [True|False] - """ - - return os.environ.get("SKIP_SLOW_TESTS", "False") == "True" \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_analysis_module.py b/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_analysis_module.py index 9c21119e97..a8b5d9c9aa 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_analysis_module.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_analysis_module.py @@ -14,7 +14,7 @@ # See the GNU General Public License at # for more details. -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase from ert.analysis import AnalysisModule, AnalysisModuleLoadStatusEnum, AnalysisModuleOptionsEnum from ert.util.enums import RngAlgTypeEnum, RngInitModeEnum diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_options_enum.py b/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_options_enum.py index 8dc2ca559c..9013f1954e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_options_enum.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/analysis/test_options_enum.py @@ -15,7 +15,7 @@ # See the GNU General Public License at # for more details. -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase from ert.analysis import AnalysisModuleOptionsEnum diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/config/test_config.py b/ThirdParty/Ert/devel/python/test/ert_tests/config/test_config.py index a6d5c07424..70747b2e2e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/config/test_config.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/config/test_config.py @@ -16,7 +16,7 @@ # for more details. from ert.config import ContentTypeEnum, UnrecognizedEnum, SchemaItem, ContentItem, ContentNode, ConfigParser -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ConfigTest(ExtendedTestCase): @@ -25,12 +25,12 @@ def setUp( self ): def test_enums(self): - self.assertTrue(ContentTypeEnum.CONFIG_STRING) - self.assertTrue(ContentTypeEnum.CONFIG_INVALID) + source_file_path = "libconfig/include/ert/config/config_schema_item.h" + self.assertEnumIsFullyDefined(ContentTypeEnum, "config_item_types", source_file_path) + self.assertTrue(UnrecognizedEnum.CONFIG_UNRECOGNIZED_ERROR) - self.assertEqual(ContentTypeEnum.CONFIG_STRING, 1) - self.assertEqual(ContentTypeEnum.CONFIG_INVALID, 512) + def test_parse(self): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecclass.py b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecclass.py index 6e71ee8129..8a95097cdd 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecclass.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecclass.py @@ -1,5 +1,5 @@ from ert.cwrap import BaseCClass -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class BaseCClassTest(ExtendedTestCase): @@ -9,4 +9,4 @@ def test_none_assertion(self): def test_creation(self): with self.assertRaises(ValueError): - obj = BaseCClass(0) \ No newline at end of file + obj = BaseCClass(0) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecenum.py b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecenum.py index ab728d4819..8aefcea9f8 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecenum.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecenum.py @@ -1,6 +1,6 @@ from ert.config import CONFIG_LIB from ert.cwrap import BaseCEnum -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecvalue.py b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecvalue.py new file mode 100644 index 0000000000..572c023519 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_basecvalue.py @@ -0,0 +1,69 @@ +from ctypes import c_ubyte, c_long +from ert.cwrap import BaseCValue, clib, CWrapper +from ert.test import ExtendedTestCase + + +class UnsignedByteValue(BaseCValue): + DATA_TYPE = c_ubyte + + +class TimeTValue(BaseCValue): + DATA_TYPE = c_long + + +class BaseCValueTest(ExtendedTestCase): + def setUp(self): + ert = clib.ert_load("libert_util") + + self.ert_wrapper = CWrapper(ert) + + self.ert_wrapper.registerType("time_t", TimeTValue) + self.make_date = self.ert_wrapper.prototype("time_t util_make_date(int, int, int)") + + + def test_illegal_type(self): + class ExceptionValueTest(BaseCValue): + DATA_TYPE = str + def __init__(self, value): + super(ExceptionValueTest, self).__init__(value) + + with self.assertRaises(ValueError): + test = ExceptionValueTest("Failure") + + + class NoDataTypeTest(BaseCValue): + def __init__(self, value): + super(NoDataTypeTest, self).__init__(value) + + with self.assertRaises(ValueError): + test = ExceptionValueTest(0) + + + def test_creation(self): + test_value = UnsignedByteValue(255) + + self.assertEqual(test_value.value(), 255) + + test_value.setValue(256) + self.assertEqual(test_value.value(), 0) + + self.assertEqual(test_value.type(), c_ubyte) + + + def test_from_param(self): + test_value = UnsignedByteValue(127) + + self.assertEqual(UnsignedByteValue.from_param(test_value).value, 127) + + with self.assertRaises(AttributeError): + UnsignedByteValue.from_param(None) + + with self.assertRaises(ValueError): + UnsignedByteValue.from_param("exception") + + + def test_time_t(self): + future = self.make_date(1, 1, 2050) + + self.assertIsInstance(future, TimeTValue) + self.assertEqual(future.value(), 2524604400) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_cwrap.py b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_cwrap.py index 3557967beb..f17a7be376 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_cwrap.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/cwrap/test_cwrap.py @@ -1,29 +1,33 @@ -import ctypes -from ert.cwrap import CWrapper, CWrapperNameSpace, CClass, BaseCClass -from ert.util import UTIL_LIB -from ert_tests import ExtendedTestCase - - +from ert.cwrap import CWrapper, BaseCClass, clib +from ert.test import ExtendedTestCase +test_lib = clib.ert_load("libert_util") # create a local namespace (so we don't overwrite StringList) +cwrapper = CWrapper(test_lib) class StringListTest(BaseCClass): def __init__(self): - c_pointer = self.cNamespace().stringlist_alloc() + c_pointer = self.cNamespace().alloc() super(StringListTest, self).__init__(c_pointer) def free(self): StringListTest.cNamespace().free(self) +CWrapper.registerObjectType("stringlisttest", StringListTest) + +StringListTest.cNamespace().alloc = cwrapper.prototype("c_void_p stringlist_alloc_new( )") +StringListTest.cNamespace().free = cwrapper.prototype("void stringlist_free(stringlisttest )") + class CWRapTest(ExtendedTestCase): + def test_return_type(self): stringlist_alloc = cwrapper.prototype("c_void_p stringlist_alloc_new( )") string_list1 = StringListTest() - stringlist_alloc = cwrapper.prototype("StringListObj stringlist_alloc_new( )") + stringlist_alloc = cwrapper.prototype("stringlisttest_obj stringlist_alloc_new( )") string_list2 = stringlist_alloc() - stringlist_alloc = cwrapper.prototype("StringListRef stringlist_alloc_new( )") + stringlist_alloc = cwrapper.prototype("stringlisttest_ref stringlist_alloc_new( )") string_list3 = stringlist_alloc() self.assertIsInstance(string_list1, StringListTest) @@ -39,6 +43,8 @@ def test_return_type(self): self.assertNotEqual(BaseCClass.from_param(string_list1), BaseCClass.from_param(string_list3)) + + def test_class_variables(self): BaseCClass.cNamespace().hello = "BooYa!" StringListTest.cNamespace()["pow"] = "Badonkadonk!" @@ -55,12 +61,6 @@ def test_class_variables(self): self.assertEqual(StringListTest.cNamespace().pow, StringListTest.cNamespace()["pow"]) -CWrapper.registerType("stringlist", StringListTest) -CWrapper.registerType("StringListObj", StringListTest.createPythonObject) -CWrapper.registerType("StringListRef", StringListTest.createCReference) -cwrapper = CWrapper(UTIL_LIB) -StringListTest.cNamespace().stringlist_alloc = cwrapper.prototype("c_void_p stringlist_alloc_new( )") -StringListTest.cNamespace().free = cwrapper.prototype("void stringlist_free(stringlist)") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_deprecation.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_deprecation.py new file mode 100644 index 0000000000..d2610d9491 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_deprecation.py @@ -0,0 +1,36 @@ +#!/usr/bin/env python +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'test_deprecation.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +import warnings + +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl import EclGrid +from ert.test import ExtendedTestCase + + +class DeprecationTest(ExtendedTestCase): + + def test_EclGrid_get_corner_xyz(self): + grid = EclGrid.create_rectangular( (10,20,30) , (1,1,1) ) + with warnings.catch_warnings(): + grid.get_corner_xyz(0 , global_index = 10) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_file.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_file.py index 210bbacb4f..1b3b7b1d0e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_file.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_file.py @@ -14,6 +14,7 @@ # # See the GNU General Public License at # for more details. +import datetime try: from unittest2 import skipIf except ImportError: @@ -22,11 +23,10 @@ from ert.ecl import EclFile, FortIO from ert.ecl.ecl_util import EclFileFlagEnum -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext -class FileTest(ExtendedTestCase): +class EclFileTest(ExtendedTestCase): def setUp(self): self.test_file = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.UNRST") self.test_fmt_file = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.FUNRST") @@ -37,8 +37,14 @@ def test_restart_days(self): self.assertAlmostEqual( 0.0 , rst_file.iget_restart_sim_days(0) ) self.assertAlmostEqual( 31.0 , rst_file.iget_restart_sim_days(1) ) self.assertAlmostEqual( 274.0 , rst_file.iget_restart_sim_days(10) ) - print "OK - " + with self.assertRaises(KeyError): + rst_file.restart_get_kw("Missing" , dtime = datetime.date( 2004,1,1)) + + with self.assertRaises(IndexError): + rst_file.restart_get_kw("SWAT" , dtime = datetime.date( 1985 , 1 , 1)) + + def test_IOError(self): @@ -46,20 +52,29 @@ def test_IOError(self): EclFile("No/Does/not/exist") + def test_iget_named(self): + f = EclFile(self.test_file) + N = f.num_named_kw( "SWAT" ) + with self.assertRaises(KeyError): + s = f.iget_named_kw( "SWAT" , N + 1) + + + def test_fwrite( self ): #work_area = TestArea("python/ecl_file/fwrite") with TestAreaContext("python/ecl_file/fwrite"): rst_file = EclFile(self.test_file) - fortio = FortIO.writer("ECLIPSE.UNRST") + fortio = FortIO("ECLIPSE.UNRST", FortIO.WRITE_MODE) rst_file.fwrite(fortio) fortio.close() rst_file.close() self.assertFilesAreEqual("ECLIPSE.UNRST", self.test_file) + @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow file test skipped!") def test_save(self): #work_area = TestArea("python/ecl_file/save") - with TestAreaContext("python/ecl_file/save") as work_area: + with TestAreaContext("python/ecl_file/save", store_area=False) as work_area: work_area.copy_file(self.test_file) rst_file = EclFile("ECLIPSE.UNRST", flags=EclFileFlagEnum.ECL_FILE_WRITABLE) swat0 = rst_file["SWAT"][0] @@ -84,6 +99,7 @@ def test_save(self): self.assertFilesAreEqual("ECLIPSE.UNRST", self.test_file) + @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow file test skipped!") def test_save_fmt(self): #work_area = TestArea("python/ecl_file/save_fmt") @@ -111,3 +127,4 @@ def test_save_fmt(self): # Random failure .... self.assertFilesAreEqual("ECLIPSE.FUNRST", self.test_fmt_file) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_submit.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_submit.py index 66afd81eed..69c850681d 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_submit.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_submit.py @@ -25,10 +25,10 @@ import time import shutil -from ert.ecl import EclQueue, EclSum +from ert.ecl import EclSum +from ert.ecl.ecl_queue import EclQueue from ert.job_queue import QueueDriverEnum, RSHDriver -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext path = "Statoil/ECLIPSE/Gurbat" diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum_vector.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum_vector.py new file mode 100644 index 0000000000..14cbb5e264 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum_vector.py @@ -0,0 +1,40 @@ +# !/usr/bin/env python +# Copyright (C) 2013 Statoil ASA, Norway. +# +# The file 'test_ecl_sum_vector.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import warnings + +from ert.ecl import EclSumVector, EclSum +from ert.test import ExtendedTestCase + + +class EclSumVectorTest(ExtendedTestCase): + def setUp(self): + self.test_file = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.SMSPEC") + self.ecl_sum = EclSum(self.test_file) + + def test_reportOnly_warns(self): + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter("always") + + vector = EclSumVector(self.ecl_sum, "FOPT", True) + assert len(w) == 1 + assert issubclass(w[-1].category, DeprecationWarning) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks.py new file mode 100644 index 0000000000..f8c570da52 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks.py @@ -0,0 +1,233 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_fault_blocks.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +from ert.ecl import EclGrid, EclTypeEnum , EclKW , EclRegion +from ert.test import ExtendedTestCase , TestAreaContext +from ert.ecl.faults import FaultBlock, FaultBlockLayer, FaultBlockCell + + +class FaultBlockTest(ExtendedTestCase): + def setUp(self): + self.grid = EclGrid.create_rectangular( (10,10,10) , (1,1,1) ) + self.kw = EclKW.create( "FAULTBLK" , self.grid.size , EclTypeEnum.ECL_INT_TYPE ) + self.kw.assign( 1 ) + + reg = EclRegion( self.grid , False ) + + for k in range(self.grid.getNZ()): + reg.clear( ) + reg.select_kslice( k , k ) + self.kw.assign( k , mask = reg ) + self.kw[ k * self.grid.getNX() * self.grid.getNY() + 7] = 177 + + + + def test_fault_block(self): + grid = EclGrid.create_rectangular( (5,5,1) , (1,1,1) ) + kw = EclKW.create( "FAULTBLK" , grid.size , EclTypeEnum.ECL_INT_TYPE ) + kw.assign( 0 ) + for j in range(1,4): + for i in range(1,4): + g = i + j*grid.getNX() + kw[g] = 1 + + layer = FaultBlockLayer( grid , 0 ) + layer.scanKeyword( kw ) + block = layer[1] + + self.assertEqual( (2.50 , 2.50) , block.getCentroid() ) + self.assertEqual( len(block) , 9) + self.assertEqual( layer , block.getParentLayer() ) + + + def test_neighbours(self): + + with TestAreaContext("python/fault_block_layer/neighbour") as work_area: + with open("kw.grdecl","w") as fileH: + fileH.write("FAULTBLK \n") + fileH.write("1 1 1 0 0\n") + fileH.write("1 2 2 0 3\n") + fileH.write("4 2 2 3 3\n") + fileH.write("4 4 4 0 0\n") + fileH.write("4 4 4 0 5\n") + fileH.write("/\n") + + kw = EclKW.read_grdecl(open("kw.grdecl") , "FAULTBLK" , ecl_type = EclTypeEnum.ECL_INT_TYPE) + + grid = EclGrid.create_rectangular( (5,5,1) , (1,1,1) ) + layer = FaultBlockLayer( grid , 0 ) + + layer.loadKeyword( kw ) + block1 = layer.getBlock( 1 ) + block2 = layer.getBlock( 2 ) + block3 = layer.getBlock( 3 ) + block4 = layer.getBlock( 4 ) + block5 = layer.getBlock( 5 ) + self.assertEqual( block1.getParentLayer() , layer ) + + #Expected: 1 -> {2,4}, 2 -> {1,3,4}, 3 -> {2}, 4 -> {1,2}, 5-> {} + + neighbours = block1.getNeighbours() + self.assertEqual( len(neighbours) , 2) + self.assertTrue( block2 in neighbours ) + self.assertTrue( block4 in neighbours ) + + neighbours = block2.getNeighbours() + self.assertEqual( len(neighbours) , 3) + self.assertTrue( block1 in neighbours ) + self.assertTrue( block3 in neighbours ) + self.assertTrue( block4 in neighbours ) + + neighbours = block3.getNeighbours() + self.assertEqual( len(neighbours) , 1) + self.assertTrue( block2 in neighbours ) + + neighbours = block4.getNeighbours() + self.assertEqual( len(neighbours) , 2) + self.assertTrue( block1 in neighbours ) + self.assertTrue( block2 in neighbours ) + + neighbours = block5.getNeighbours() + self.assertEqual( len(neighbours) , 0) + + + + + def test_fault_block_edge(self): + grid = EclGrid.create_rectangular( (5,5,1) , (1,1,1) ) + kw = EclKW.create( "FAULTBLK" , grid.size , EclTypeEnum.ECL_INT_TYPE ) + kw.assign( 0 ) + for j in range(1,4): + for i in range(1,4): + g = i + j*grid.getNX() + kw[g] = 1 + + layer = FaultBlockLayer( grid , 0 ) + #with self.assertRaises: + # layer.getEdgePolygon( ) + + + + def test_fault_block_layer(self): + with self.assertRaises(ValueError): + layer = FaultBlockLayer( self.grid , -1 ) + + with self.assertRaises(ValueError): + layer = FaultBlockLayer( self.grid , self.grid.size ) + + layer = FaultBlockLayer( self.grid , 1 ) + self.assertEqual( 1 , layer.getK() ) + + kw = EclKW.create( "FAULTBLK" , self.grid.size , EclTypeEnum.ECL_FLOAT_TYPE ) + with self.assertRaises(ValueError): + layer.scanKeyword( kw ) + + layer.scanKeyword( self.kw ) + self.assertEqual( 2 , len(layer) ) + + with self.assertRaises(TypeError): + ls = layer["JJ"] + + l = [] + for blk in layer: + l.append( blk ) + self.assertEqual( len(l) , 2 ) + + l0 = layer[0] + l1 = layer[1] + self.assertTrue( isinstance(l1 , FaultBlock )) + l0.getCentroid() + l1.getBlockID() + + with self.assertRaises(IndexError): + l2 = layer[2] + + + self.assertEqual( True , 1 in layer) + self.assertEqual( True , 2 in layer) + self.assertEqual( False , 77 in layer) + self.assertEqual( False , 177 in layer) + + l1 = layer.getBlock( 1 ) + self.assertTrue( isinstance(l1 , FaultBlock )) + + with self.assertRaises(KeyError): + l =layer.getBlock(66) + + with self.assertRaises(KeyError): + layer.deleteBlock(66) + + layer.deleteBlock(2) + self.assertEqual( 1 , len(layer)) + blk = layer[0] + self.assertEqual( blk.getBlockID() , 1 ) + + with self.assertRaises(KeyError): + layer.addBlock(1) + + blk2 = layer.addBlock(2) + self.assertEqual( len(layer) , 2 ) + + blk3 = layer.addBlock() + self.assertEqual( len(layer) , 3 ) + + + layer.addBlock(100) + layer.addBlock(101) + layer.addBlock(102) + layer.addBlock(103) + + layer.deleteBlock(2) + blk1 = layer.getBlock( 103 ) + blk2 = layer[-1] + self.assertEqual( blk1.getBlockID() , blk2.getBlockID() ) + + fault_block = layer[0] + fault_block.assignToRegion( 2 ) + self.assertEqual( [2] , list(fault_block.getRegionList())) + + fault_block.assignToRegion( 2 ) + self.assertEqual( [2] , list(fault_block.getRegionList())) + + fault_block.assignToRegion( 3 ) + self.assertEqual( [2,3] , list(fault_block.getRegionList())) + + fault_block.assignToRegion( 1 ) + self.assertEqual( [1,2,3] , list(fault_block.getRegionList())) + + fault_block.assignToRegion( 2 ) + self.assertEqual( [1,2,3] , list(fault_block.getRegionList())) + + + + def test_fault_block_layer_export(self): + layer = FaultBlockLayer( self.grid , 1 ) + kw1 = EclKW.create( "FAULTBLK" , self.grid.size + 1 , EclTypeEnum.ECL_INT_TYPE ) + with self.assertRaises(ValueError): + layer.exportKeyword( kw1 ) + + kw2 = EclKW.create( "FAULTBLK" , self.grid.size , EclTypeEnum.ECL_FLOAT_TYPE ) + with self.assertRaises(TypeError): + layer.exportKeyword(kw2) + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks_statoil.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks_statoil.py new file mode 100644 index 0000000000..0225105108 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fault_blocks_statoil.py @@ -0,0 +1,40 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_fault_blocks.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +from ert.ecl import EclGrid, EclTypeEnum , EclKW +from ert.test import ExtendedTestCase +from ert.ecl.faults import FaultBlock, FaultBlockLayer + +class FaultBlockTest(ExtendedTestCase): + def setUp(self): + self.grid = EclGrid( self.createTestPath("Statoil/ECLIPSE/Mariner/MARINER.EGRID")) + fileH = open( self.createTestPath("Statoil/ECLIPSE/Mariner/faultblock.grdecl") ) + self.kw = EclKW.read_grdecl( fileH , "FAULTBLK" , ecl_type = EclTypeEnum.ECL_INT_TYPE ) + + + + def test_load(self): + for k in range(self.grid.getNZ()): + faultBlocks = FaultBlockLayer(self.grid , k) + faultBlocks.scanKeyword( self.kw ) + for block in faultBlocks: + centroid = block.getCentroid() + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_faults.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_faults.py new file mode 100644 index 0000000000..b3d68d674e --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_faults.py @@ -0,0 +1,289 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_faults.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl.faults import FaultCollection, Fault, FaultLine, FaultSegment +from ert.ecl import EclGrid +from ert.test import ExtendedTestCase +from ert.geo import Polyline + +class FaultTest(ExtendedTestCase): + def setUp(self): + self.faults1 = self.createTestPath("local/ECLIPSE/FAULTS/fault1.grdecl") + self.faults2 = self.createTestPath("local/ECLIPSE/FAULTS/fault2.grdecl") + self.grid = EclGrid.create_rectangular( (151,100,50) , (1,1,1)) + + + def test_empty_collection(self): + faults = FaultCollection(self.grid) + self.assertEqual(0 , len(faults)) + + self.assertFalse( faults.hasFault("FX") ) + + with self.assertRaises(TypeError): + f = faults[ [] ] + + with self.assertRaises(KeyError): + f = faults["FX"] + + with self.assertRaises(IndexError): + f = faults[0] + + + def test_splitLine(self): + faults = FaultCollection(self.grid) + with self.assertRaises(ValueError): + # Not slash terminated + t = faults.splitLine("'F1' 149 149 29 29 1 43 'Y'") + + with self.assertRaises(ValueError): + # Not integer + t = faults.splitLine("'F1' 149 149 29 29 1 43X 'Y' /") + + with self.assertRaises(ValueError): + # Missing item + t = faults.splitLine("'F1' 149 29 29 1 43 'Y' /") + + with self.assertRaises(ValueError): + # Quote fuckup + t = faults.splitLine("'F1 149 149 29 29 1 43 'X' /") + + + def test_empty_fault( self ): + f = Fault(self.grid , "NAME") + self.assertEqual("NAME" , f.getName()) + + with self.assertRaises(KeyError): + g = f["Key"] + + with self.assertRaises(KeyError): + g = f[0] + + self.assertEqual( len(f) , 0 ) + + + def test_empty_faultLine(self): + fl = FaultLine(self.grid , 10) + self.assertEqual( 10 , fl.getK()) + self.assertEqual( 0 , len(fl) ) + + with self.assertRaises(TypeError): + f = fl[ "Test" ] + + with self.assertRaises(IndexError): + f = fl[0] + + + def test_faultLine(self): + fl = FaultLine(self.grid , 10) + S1 = FaultSegment(0 , 10) + S2 = FaultSegment(10 , 20) + fl.tryAppend( S1 ) + fl.tryAppend( S2 ) + fl.verify() + S3 = FaultSegment(20 , 30) + fl.tryAppend( S3 ) + fl.verify() + #--- + fl = FaultLine(self.grid , 10) + S1 = FaultSegment(0 , 10) + S2 = FaultSegment(20 , 10) + fl.tryAppend( S1 ) + self.assertTrue( fl.tryAppend( S2 ) ) + fl.verify() + #--- + fl = FaultLine(self.grid , 10) + S1 = FaultSegment(10 , 0) + S2 = FaultSegment(20 , 10) + fl.tryAppend( S1 ) + fl.tryAppend( S2 ) + fl.verify() + #--- + fl = FaultLine(self.grid , 10) + S1 = FaultSegment(10 , 0) + S2 = FaultSegment(10 , 20) + fl.tryAppend( S1 ) + fl.tryAppend( S2 ) + fl.verify() + + fl = FaultLine(self.grid , 10) + S1 = FaultSegment(10 , 0) + S2 = FaultSegment(10 , 20) + fl.tryAppend( S1 ) + fl.tryAppend( S2 ) + S3 = FaultSegment(40 , 30) + self.assertTrue( fl.tryAppend(S3) == False ) + self.assertEqual( len(fl) , 2 ) + + pl = fl.getPolyline( ) + self.assertIsInstance( pl , Polyline ) + self.assertEqual( len(pl) , len(fl) + 1 ) + + S3 = FaultSegment(20 , 30) + fl.tryAppend( S3 ) + pl = fl.getPolyline( ) + self.assertIsInstance( pl , Polyline ) + self.assertEqual( len(pl) , len(fl) + 1 ) + + + + + def test_load(self): + faults = FaultCollection(self.grid , self.faults1) + self.assertEqual( 3 , len(faults)) + faults.load( self.faults2 ) + self.assertEqual( 7 , len(faults)) + fault1 = faults["F1"] + layer8 = fault1[8] + self.assertEqual( len(layer8) , 1 ) + + + def test_iter(self): + faults = FaultCollection(self.grid , self.faults1 , self.faults2) + self.assertEqual( 7 , len(faults)) + c = 0 + for f in faults: + c += 1 + self.assertEqual( c , len(faults)) + + + + def test_fault(self): + f = Fault(self.grid , "NAME") + + with self.assertRaises(ValueError): + # Invalid face + f.addRecord( 10 , 10 , 11 , 11 , 1 , 43 , "F") + + + with self.assertRaises(ValueError): + # Invalid coordinates + f.addRecord( -1 , 10 , 11 , 11 , 1 , 43 , "X") + + with self.assertRaises(ValueError): + # Invalid coordinates + f.addRecord( 10000 , 10 , 11 , 11 , 1 , 43 , "X") + + with self.assertRaises(ValueError): + # Invalid coordinates + f.addRecord( 10 , 9 , 11 , 11 , 1 , 43 , "X") + + + with self.assertRaises(ValueError): + # Invalid coordinates + f.addRecord( 10 , 9 , 11 , 11 , 1 , 43 , "X") + + with self.assertRaises(ValueError): + # Invalid coordinates/face combination + f.addRecord( 10 , 11 , 11 , 11 , 1 , 43 , "X") + + with self.assertRaises(ValueError): + # Invalid coordinates/face combination + f.addRecord( 10 , 11 , 11 , 12 , 1 , 43 , "Y") + + f.addRecord(10 , 10 , 0 , 10 , 1 , 10 , "X") + + + def test_segment(self ): + s0 = FaultSegment(0 , 10) + self.assertEqual(s0.getC1() , 0 ) + self.assertEqual(s0.getC2() , 10 ) + + s0.swap() + self.assertEqual(s0.getC1() , 10 ) + self.assertEqual(s0.getC2() , 0 ) + + + + def test_fault_line(self ): + faults = FaultCollection(self.grid , self.faults1 , self.faults2) + for fault in faults: + for layer in fault: + for fl in layer: + fl.verify() + + + + + + def test_neighbour_cells(self): + nx = 10 + ny = 8 + nz = 7 + grid = EclGrid.create_rectangular( (nx , ny , nz) , (1,1,1) ) + faults_file = self.createTestPath("local/ECLIPSE/FAULTS/faults_nb.grdecl") + faults = FaultCollection( grid , faults_file ) + + fault = faults["FY"] + self.assertEqual(len(fault),1) + fault_layer = fault[0] + + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(0, nx) , (1,nx + 1), (2,nx+2) , (3,nx + 3) , (4,nx+4)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + + fl2 = fault_layer[1] + nb_cells2 = fl2.getNeighborCells() + true_nb_cells2 = [(6, nx+6) , (7,nx + 7), (8 , nx+8) , (9,nx + 9)] + self.assertListEqual( nb_cells2 , true_nb_cells2 ) + + nb_cells = fault_layer.getNeighborCells() + self.assertListEqual( nb_cells , true_nb_cells1 + true_nb_cells2) + + + fault = faults["FY0"] + fault_layer = fault[0] + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(-1,0) , (-1,1), (-1,2)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + + + fault = faults["FYNY"] + fault_layer = fault[0] + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(nx * (ny - 1) , -1), (nx * (ny - 1) + 1 , -1), (nx * (ny - 1) + 2, -1)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + + fault = faults["FX"] + fault_layer = fault[0] + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(0,1) , (nx , nx+1) , (2*nx , 2*nx + 1)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + + + fault = faults["FX0"] + fault_layer = fault[0] + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(-1 , 0) , (-1 , nx) , (-1 , 2*nx)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + + fault = faults["FXNX"] + fault_layer = fault[0] + fl1 = fault_layer[0] + nb_cells1 = fl1.getNeighborCells() + true_nb_cells1 = [(nx -1 , -1) , (2*nx -1 , -1) , (3*nx - 1 , -1)] + self.assertListEqual( nb_cells1 , true_nb_cells1 ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py index bb1499f2f5..6826d75565 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py @@ -15,9 +15,9 @@ # See the GNU General Public License at # for more details. import os +from random import randint from ert.ecl import FortIO, EclTypeEnum, EclKW -from ert_tests import ExtendedTestCase -from ert.util.test_area import TestAreaContext +from ert.test import ExtendedTestCase, TestAreaContext @@ -28,19 +28,18 @@ def setUp(self): def test_open_read(self): - f = FortIO.reader(self.unrst_file) - self.assertTrue(f) + f = FortIO(self.unrst_file, FortIO.READ_MODE) + self.assertIsNotNone(f) def test_open_write(self): with TestAreaContext("python/fortio/write"): - f = FortIO.writer("newfile") - f.close() - self.assertTrue(True) + f = FortIO("newfile", FortIO.WRITE_MODE) + self.assertTrue(os.path.exists("newfile")) def test_noex(self): with self.assertRaises(IOError): - f = FortIO.reader("/tmp/does/notExist") + f = FortIO("odes_not_exist", FortIO.READ_MODE) def test_kw(self): kw1 = EclKW.create("KW1", 2, EclTypeEnum.ECL_INT_TYPE) @@ -52,21 +51,75 @@ def test_kw(self): kw2[1] = 335 with TestAreaContext("python/fortio/write-kw"): - f = FortIO.writer("test", fmt_file=False) + f = FortIO("test", FortIO.WRITE_MODE, fmt_file=False) kw1.fwrite(f) - f.close() - f = FortIO.open("test", mode="a") + f = FortIO("test", FortIO.APPEND_MODE) kw2.fwrite(f) - f.close() - f = FortIO.open("test", fmt_file=False) + f = FortIO("test", fmt_file=False) k1 = EclKW.fread(f) k2 = EclKW.fread(f) - f.close() self.assertTrue(k1.equal(kw1)) self.assertTrue(k2.equal(kw2)) + def test_fortio_creation(self): + with TestAreaContext("python/fortio/create"): + w = FortIO("test", FortIO.WRITE_MODE) + rw = FortIO("test", FortIO.READ_AND_WRITE_MODE) + r = FortIO("test", FortIO.READ_MODE) + a = FortIO("test", FortIO.APPEND_MODE) + + w.close() + w.close() # should not fail + + def test_fortio_read_and_write(self): + with TestAreaContext("python/fortio/read_and_write"): + f = FortIO("test", FortIO.WRITE_MODE) + + record_size = 4000 + + for i, c in enumerate("abcdefghijklmnopqrstuvwxyz"): + data = bytearray(c * record_size) + f.writeRecord(data) + position = f.getPosition() + self.assertEqual(position, (i + 1) * (record_size + 8)) + + f = FortIO("test", FortIO.READ_MODE) + + for c in "abcdefghijklmnopqrstuvwxyz": + record = f.readRecordAsString(record_size) + self.assertEqual(record, c * record_size) + + + def test_fortio_read_and_write_and_rewrite(self): + with TestAreaContext("python/fortio/read_and_write_and_rewrite"): + record_size = 4000 + + f = FortIO("complete", FortIO.WRITE_MODE) + for c in "abcdefghijklmnopqrstuvwxyz": + data = bytearray(c * record_size) + f.writeRecord(data) + + + f = FortIO("test", FortIO.WRITE_MODE) + + positions = {} + for c in "abcdefghij-lmnopqrstuvwxyz": + data = bytearray(c * record_size) + f.writeRecord(data) + positions[c] = f.getPosition() + + + f = FortIO("test", FortIO.READ_AND_WRITE_MODE) + + f.seek(positions["j"]) + + new_data = bytearray("k" * record_size) + f.writeRecord(new_data) + + f.close() + self.assertFilesAreEqual("test", "complete") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grdecl.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grdecl.py index baab05ad55..cfda2feef1 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grdecl.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grdecl.py @@ -17,7 +17,7 @@ import os from ert.ecl import EclKW -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grid.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grid.py index 0e2024cb04..b7f10a96ac 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grid.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_grid.py @@ -14,6 +14,8 @@ # # See the GNU General Public License at # for more details. +import math + try: from unittest2 import skipIf except ImportError: @@ -22,8 +24,7 @@ import time from ert.ecl import EclTypeEnum, EclKW, EclGrid from ert.util import DoubleVector -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext class GridTest(ExtendedTestCase): @@ -38,16 +39,101 @@ def grid_file(self): def grdecl_file(self): return self.createTestPath("Statoil/ECLIPSE/Gurbat/include/example_grid_sim.GRDECL") + def test_dims(self): + grid = EclGrid.create_rectangular( (10,20,30) , (1,1,1) ) + self.assertEqual( grid.getNX() , 10 ) + self.assertEqual( grid.getNY() , 20 ) + self.assertEqual( grid.getNZ() , 30 ) + self.assertEqual( grid.getGlobalSize() , 30*10*20 ) + + + + def test_node_pos(self): + grid = EclGrid.create_rectangular( (10,20,30) , (1,1,1) ) + with self.assertRaises(IndexError): + grid.getNodePos(-1,0,0) + + with self.assertRaises(IndexError): + grid.getNodePos(11,0,0) + + p0 = grid.getNodePos(0,0,0) + self.assertEqual( p0 , (0,0,0)) + + p7 = grid.getNodePos(10,20,30) + self.assertEqual( p7 , (10,20,30)) + + + + + + + def test_corner(self): + grid = EclGrid(self.egrid_file()) + nx = grid.getNX() + ny = grid.getNY() + nz = grid.getNZ() + + (x1,y1,z1) = grid.getCellCorner( 0 , ijk = (0,0,0)) + (x2,y2,z2) = grid.getLayerXYZ( 0 , 0 ) + self.assertEqual(x1,x2) + self.assertEqual(y1,y2) + self.assertEqual(z1,z2) + + (x1,y1,z1) = grid.getCellCorner( 0 , ijk = (0,1,0)) + (x2,y2,z2) = grid.getLayerXYZ( (nx + 1) , 0 ) + self.assertEqual(x1,x2) + self.assertEqual(y1,y2) + self.assertEqual(z1,z2) + + (x1,y1,z1) = grid.getCellCorner( 1 , ijk = (nx - 1,0,0)) + (x2,y2,z2) = grid.getLayerXYZ( nx , 0 ) + self.assertEqual(x1,x2) + self.assertEqual(y1,y2) + self.assertEqual(z1,z2) + + (x1,y1,z1) = grid.getCellCorner( 4 , ijk = (0,0,nz-1)) + (x2,y2,z2) = grid.getLayerXYZ( 0 , nz ) + self.assertEqual(x1,x2) + self.assertEqual(y1,y2) + self.assertEqual(z1,z2) + + (x1,y1,z1) = grid.getCellCorner( 7 , ijk = (nx-1,ny-1,nz-1)) + (x2,y2,z2) = grid.getLayerXYZ( (nx + 1)*(ny + 1) - 1 , nz ) + self.assertEqual(x1,x2) + self.assertEqual(y1,y2) + self.assertEqual(z1,z2) + + + + with self.assertRaises(IndexError): + grid.getLayerXYZ( -1 , 0 ) + + with self.assertRaises(IndexError): + grid.getLayerXYZ( (nx + 1)*(ny + 1) , 0 ) + + with self.assertRaises(IndexError): + grid.getLayerXYZ( 0 , -1 ) + + with self.assertRaises(IndexError): + grid.getLayerXYZ( 0 , nz + 1 ) + + def test_GRID( self ): grid = EclGrid(self.grid_file()) self.assertTrue(grid) - - + + + def test_EGRID( self ): grid = EclGrid(self.egrid_file()) self.assertTrue(grid) - - + dims = grid.dims + self.assertEqual(dims[0] , grid.getNX()) + self.assertEqual(dims[1] , grid.getNY()) + self.assertEqual(dims[2] , grid.getNZ()) + + + def create(self, filename, load_actnum=True): fileH = open(filename, "r") specgrid = EclKW.read_grdecl(fileH, "SPECGRID", ecl_type=EclTypeEnum.ECL_INT_TYPE, strict=False) @@ -57,12 +143,12 @@ def create(self, filename, load_actnum=True): actnum = EclKW.read_grdecl(fileH, "ACTNUM", ecl_type=EclTypeEnum.ECL_INT_TYPE) else: actnum = None - + mapaxes = EclKW.read_grdecl(fileH, "MAPAXES") grid = EclGrid.create(specgrid, zcorn, coord, actnum, mapaxes=mapaxes) return grid - - + + def test_rect(self): with TestAreaContext("python/grid-test/testRect"): a1 = 1.0 @@ -73,87 +159,100 @@ def test_rect(self): grid2 = EclGrid("rect.EGRID") self.assertTrue(grid) self.assertTrue(grid2) - + (x, y, z) = grid.get_xyz(ijk=(4, 4, 4)) self.assertAlmostEqualList([x, y, z], [4.5 * a1, 4.5 * a2, 4.5 * a3]) - + v = grid.cell_volume(ijk=(4, 4, 4)) - self.assertAlmostEqualScaled(v, a1 * a2 * a3) - + self.assertFloatEqual(v, a1 * a2 * a3) + z = grid.depth(ijk=(4, 4, 4 )) - self.assertAlmostEqualScaled(z, 4.5 * a3) - + self.assertFloatEqual(z, 4.5 * a3) + g1 = grid.global_index(ijk=(2, 2, 2)) g2 = grid.global_index(ijk=(4, 4, 4)) (dx, dy, dz) = grid.distance(g2, g1) self.assertAlmostEqualList([dx, dy, dz], [2 * a1, 2 * a2, 2 * a3]) - + self.assertTrue(grid.cell_contains(2.5 * a1, 2.5 * a2, 2.5 * a3, ijk=(2, 2, 2))) - - ijk = grid.find_cell(1.5 * a1, 2.5 * a2, 3.5 * a3) - self.assertAlmostEqualList(ijk, [1, 2, 3]) - - + + #ijk = grid.find_cell(1.5 * a1 , 2.5 * a2 , 3.5 * a3) + #self.assertAlmostEqualList(ijk, [1, 2, 3]) + + def test_create(self): grid = self.create(self.grdecl_file()) self.assertTrue(grid) - - + + def test_ACTNUM(self): g1 = self.create(self.grdecl_file()) g2 = self.create(self.grdecl_file(), load_actnum=False) self.assertTrue(g1.equal(g2)) - - + + def test_time(self): t0 = time.clock() g1 = EclGrid(self.egrid_file()) t1 = time.clock() t = t1 - t0 self.assertTrue(t < 1.0) - - + + def test_save(self): with TestAreaContext("python/grid-test/testSave"): g1 = EclGrid(self.egrid_file()) - + g1.save_EGRID("test.EGRID") g2 = EclGrid("test.EGRID") self.assertTrue(g1.equal(g2)) - + g1.save_GRID("test.GRID") g2 = EclGrid("test.GRID") self.assertTrue(g1.equal(g2)) - + fileH = open("test.grdecl", "w") g1.save_grdecl(fileH) fileH.close() g2 = self.create("test.grdecl") self.assertTrue(g1.equal(g2)) - + @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow test of coarse grid skipped!") def test_coarse(self): #work_area = TestArea("python/grid-test/testCoarse") with TestAreaContext("python/grid-test/testCoarse"): testGRID = True g1 = EclGrid(self.createTestPath("Statoil/ECLIPSE/LGCcase/LGC_TESTCASE2.EGRID")) - + g1.save_EGRID("LGC.EGRID") g2 = EclGrid("LGC.EGRID") self.assertTrue(g1.equal(g2, verbose=True)) - + if testGRID: g1.save_GRID("LGC.GRID") g3 = EclGrid("LGC.GRID") self.assertTrue(g1.equal(g3, verbose=True)) - + self.assertTrue(g1.coarse_groups() == 3384) - - + + def test_raise_IO_error(self): with self.assertRaises(IOError): g = EclGrid("/does/not/exist.EGRID") + def test_boundingBox(self): + grid = EclGrid.create_rectangular((10,10,10) , (1,1,1)) + with self.assertRaises(ValueError): + bbox = grid.getBoundingBox2D(layer = -1 ) + + with self.assertRaises(ValueError): + bbox = grid.getBoundingBox2D( layer = 11 ) + + bbox = grid.getBoundingBox2D( layer = 10 ) + self.assertEqual( bbox , ((0,0) , (10, 0) , (10 , 10) , (0,10))) + + + @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow test of dual grid skipped!") def test_dual(self): @@ -193,9 +292,10 @@ def test_dual(self): self.assertTrue(dgrid.get_active_index(global_index=106) == -1) self.assertTrue(dgrid.get_global_index1F(2) == 5) - dgrid.save_GRID("DUAL_DIFF.GRID") - dgrid2 = EclGrid("DUAL_DIFF.GRID") - self.assertTrue(dgrid.equal(dgrid2)) + dgrid.save_EGRID("DUAL_DIFF.EGRID") + dgrid2 = EclGrid("DUAL_DIFF.EGRID") + self.assertTrue(dgrid.equal(dgrid2 , verbose = True)) + @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow test of nactive large memory skipped!") def test_nactive_large_memory(self): @@ -210,3 +310,21 @@ def test_nactive_large_memory(self): grid2 = EclGrid(case) self.assertEqual(grid1.nactive, grid2.nactive) self.assertEqual(grid1.nactive, 34770) + + + def test_no_mapaxes_check_for_nan(self): + grid_paths = ["Statoil/ECLIPSE/NoMapaxes/ECLIPSE.EGRID", "Statoil/ECLIPSE/NoMapaxes/ECLIPSE.GRID"] + + for grid_path in grid_paths: + test_grid_path = self.createTestPath(grid_path) + grid = EclGrid(test_grid_path) + + xyz = grid.get_xyz(ijk=(0, 0, 0)) + self.assertFalse(math.isnan(xyz[0])) + self.assertFalse(math.isnan(xyz[1])) + self.assertFalse(math.isnan(xyz[2])) + + xyz = grid.get_xyz(ijk=(1, 1, 1)) + self.assertFalse(math.isnan(xyz[0])) + self.assertFalse(math.isnan(xyz[1])) + self.assertFalse(math.isnan(xyz[2])) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_indexed_read.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_indexed_read.py new file mode 100644 index 0000000000..f93738f9a5 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_indexed_read.py @@ -0,0 +1,120 @@ +import ctypes +from ert.cwrap import clib, CWrapper +from ert.ecl import EclKW, EclFile, EclTypeEnum, FortIO +from ert.test import ExtendedTestCase, TestAreaContext +from ert.util import IntVector + + +ecl_lib = clib.ert_load("libecl") +ecl_wrapper = CWrapper(ecl_lib) + + +freadIndexedData = ecl_wrapper.prototype("void ecl_kw_fread_indexed_data(fortio, int, int, int, int_vector, char*)") # fortio, offset, type, count, index_map, buffer +eclFileIndexedRead = ecl_wrapper.prototype("void ecl_file_indexed_read(ecl_file, char*, int, int_vector, char*)") # ecl_file, kw, index, index_map, buffer + + +class EclIndexedReadTest(ExtendedTestCase): + def test_ecl_kw_indexed_read(self): + with TestAreaContext("ecl_kw_indexed_read") as area: + fortio = FortIO("index_test", mode=FortIO.WRITE_MODE) + + element_count = 100000 + ecl_kw = EclKW.create("TEST", element_count, EclTypeEnum.ECL_INT_TYPE) + + for index in range(element_count): + ecl_kw[index] = index + + ecl_kw.fwrite(fortio) + + fortio.close() + + + fortio = FortIO("index_test", mode=FortIO.READ_MODE) + + new_ecl_kw = EclKW.fread(fortio) + + for index in range(element_count): + self.assertEqual(new_ecl_kw[index], index) + + index_map = IntVector() + index_map.append(2) + index_map.append(3) + index_map.append(5) + index_map.append(7) + index_map.append(11) + index_map.append(13) + index_map.append(313) + index_map.append(1867) + index_map.append(5227) + index_map.append(7159) + index_map.append(12689) + index_map.append(18719) + index_map.append(32321) + index_map.append(37879) + index_map.append(54167) + index_map.append(77213) + index_map.append(88843) + index_map.append(99991) + + char_buffer = ctypes.create_string_buffer(len(index_map) * ctypes.sizeof(ctypes.c_int)) + + freadIndexedData(fortio, 24, EclTypeEnum.ECL_INT_TYPE, element_count, index_map, char_buffer) + + int_buffer = ctypes.cast(char_buffer, ctypes.POINTER(ctypes.c_int)) + + for index, index_map_value in enumerate(index_map): + self.assertEqual(index_map_value, int_buffer[index]) + + + + def test_ecl_file_indexed_read(self): + with TestAreaContext("ecl_file_indexed_read") as area: + fortio = FortIO("ecl_file_index_test", mode=FortIO.WRITE_MODE) + + element_count = 100000 + ecl_kw_1 = EclKW.create("TEST1", element_count, EclTypeEnum.ECL_INT_TYPE) + ecl_kw_2 = EclKW.create("TEST2", element_count, EclTypeEnum.ECL_INT_TYPE) + + for index in range(element_count): + ecl_kw_1[index] = index + ecl_kw_2[index] = index + 3 + + ecl_kw_1.fwrite(fortio) + ecl_kw_2.fwrite(fortio) + + fortio.close() + + ecl_file = EclFile("ecl_file_index_test") + + index_map = IntVector() + index_map.append(2) + index_map.append(3) + index_map.append(5) + index_map.append(7) + index_map.append(11) + index_map.append(13) + index_map.append(313) + index_map.append(1867) + index_map.append(5227) + index_map.append(7159) + index_map.append(12689) + index_map.append(18719) + index_map.append(32321) + index_map.append(37879) + index_map.append(54167) + index_map.append(77213) + index_map.append(88843) + index_map.append(99991) + + char_buffer_1 = ctypes.create_string_buffer(len(index_map) * ctypes.sizeof(ctypes.c_int)) + char_buffer_2 = ctypes.create_string_buffer(len(index_map) * ctypes.sizeof(ctypes.c_int)) + + eclFileIndexedRead(ecl_file, "TEST2", 0, index_map, char_buffer_2) + eclFileIndexedRead(ecl_file, "TEST1", 0, index_map, char_buffer_1) + + int_buffer_1 = ctypes.cast(char_buffer_1, ctypes.POINTER(ctypes.c_int)) + int_buffer_2 = ctypes.cast(char_buffer_2, ctypes.POINTER(ctypes.c_int)) + + for index, index_map_value in enumerate(index_map): + self.assertEqual(index_map_value, int_buffer_1[index]) + self.assertEqual(index_map_value, int_buffer_2[index] - 3) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_kw.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_kw.py index 5419244360..0d1f46483e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_kw.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_kw.py @@ -15,10 +15,10 @@ # See the GNU General Public License at # for more details. import os -from ert.ecl import EclKW, EclTypeEnum, EclFile -from ert.util.test_area import TestAreaContext +import random +from ert.ecl import EclKW, EclTypeEnum, EclFile, FortIO, EclFileFlagEnum -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext def copy_long(): @@ -102,6 +102,43 @@ def kw_test( self, data_type, data, fmt ): file2.write(fmt % d) file2.close() self.assertFilesAreEqual(name1, name2) + self.assertEqual( kw.getEclType() , data_type ) + + + def test_sum( self ): + kw_string = EclKW.create( "STRING" , 100 , EclTypeEnum.ECL_CHAR_TYPE ) + with self.assertRaises(ValueError): + kw_string.sum() + + + kw_int = EclKW.create( "INT" , 4 , EclTypeEnum.ECL_INT_TYPE ) + kw_int[0] = 1 + kw_int[1] = 2 + kw_int[2] = 3 + kw_int[3] = 4 + self.assertEqual( kw_int.sum() , 10 ) + + kw_d = EclKW.create( "D" , 4 , EclTypeEnum.ECL_DOUBLE_TYPE ) + kw_d[0] = 1 + kw_d[1] = 2 + kw_d[2] = 3 + kw_d[3] = 4 + self.assertEqual( kw_d.sum() , 10 ) + + kw_f = EclKW.create( "F" , 4 , EclTypeEnum.ECL_FLOAT_TYPE ) + kw_f[0] = 1 + kw_f[1] = 2 + kw_f[2] = 3 + kw_f[3] = 4 + self.assertEqual( kw_f.sum() , 10 ) + + kw_b = EclKW.create( "F" , 4 , EclTypeEnum.ECL_BOOL_TYPE ) + kw_b[0] = False + kw_b[1] = True + kw_b[2] = False + kw_b[3] = True + self.assertEqual( kw_b.sum() , 2 ) + def test_sub_copy(self): @@ -137,6 +174,44 @@ def test_fprintf( self ): self.kw_test(EclTypeEnum.ECL_BOOL_TYPE, [True, True, True, False, True], "%4d\n") self.kw_test(EclTypeEnum.ECL_CHAR_TYPE, ["1", "22", "4444", "666666", "88888888"], "%-8s\n") + def test_kw_write(self): + with TestAreaContext("python/ecl_kw/writing"): + + data = [random.random() for i in range(10000)] + + kw = EclKW.new("TEST", len(data), EclTypeEnum.ECL_DOUBLE_TYPE) + i = 0 + for d in data: + kw[i] = d + i += 1 + + fortio = FortIO("ECL_KW_TEST", FortIO.WRITE_MODE) + kw.fwrite(fortio) + fortio.close() + + fortio = FortIO("ECL_KW_TEST") + + kw2 = EclKW.fread(fortio) + + self.assertTrue(kw.equal(kw2)) + + ecl_file = EclFile("ECL_KW_TEST", flags=EclFileFlagEnum.ECL_FILE_WRITABLE) + kw3 = ecl_file["TEST"][0] + self.assertTrue(kw.equal(kw3)) + ecl_file.save_kw(kw3) + ecl_file.close() + + fortio = FortIO("ECL_KW_TEST", FortIO.READ_AND_WRITE_MODE) + kw4 = EclKW.fread(fortio) + self.assertTrue(kw.equal(kw4)) + fortio.seek(0) + kw4.fwrite(fortio) + fortio.close() + + ecl_file = EclFile("ECL_KW_TEST") + kw5 = ecl_file["TEST"][0] + self.assertTrue(kw.equal(kw5)) + #def cutoff( x , arg ): # if x < arg: diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_layer.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_layer.py new file mode 100644 index 0000000000..5cffccc51a --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_layer.py @@ -0,0 +1,49 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_layer.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl.faults import Layer +from ert.test import ExtendedTestCase + +class LayerTest(ExtendedTestCase): + def setUp(self): + pass + + + def test_create_layer(self): + layer = Layer(10,10) + self.assertTrue( isinstance( layer , Layer )) + + + def test_add_cell(self): + layer = Layer(10,10) + with self.assertRaises(ValueError): + layer[100,100] = 199 + + with self.assertRaises(ValueError): + layer[100,"X"] = 199 + + with self.assertRaises(ValueError): + layer[100] = 199 + + layer[5,5] = 88 + self.assertEqual(layer[5,5] , 88) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_legacy_ecl.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_legacy_ecl.py index 468928035e..c07b53f689 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_legacy_ecl.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_legacy_ecl.py @@ -51,7 +51,7 @@ def test_classes(self): ecl.ecl_default.default.ecl_version new_ecl.EclDefault.ecl_version() - self.assertEqual(ecl.EclQueue, new_ecl.EclQueue) + self.assertEqual(ecl.EclQueue, new_ecl.ecl_queue.EclQueue) def test_enums(self): self.assertEqual(ecl.ECL_FLOAT_TYPE, EclTypeEnum.ECL_FLOAT_TYPE) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_npv.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_npv.py new file mode 100644 index 0000000000..ac31d398ef --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_npv.py @@ -0,0 +1,194 @@ +#!/usr/bin/env python +# Copyright (C) 2011 Statoil ASA, Norway. +# +# The file 'sum_test.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os +import datetime +import math + +try: + from unittest2 import skipIf, skipUnless, skipIf +except ImportError: + from unittest import skipIf, skipUnless, skipIf + +from ert.ecl import EclSum +from ert.ecl import EclNPV , NPVPriceVector + +from ert.util import StringList, TimeVector, DoubleVector , CTime +from ert.test import ExtendedTestCase , TestAreaContext + + +base = "ECLIPSE" +path = "Statoil/ECLIPSE/Gurbat" +case = "%s/%s" % (path, base) + +def callable(x): + return 1 + +def linear1(x): + return x + +def linear2(x): + return 2*x + + +class NPVTest(ExtendedTestCase): + def setUp(self): + self.case = self.createTestPath(case) + + + def test_create(self): + with self.assertRaises(Exception): + npv = EclNPV("/does/not/exist") + + npv = EclNPV( self.case ) + + + def test_eval_npv(self): + npv = EclNPV( self.case ) + with self.assertRaises(ValueError): + npv.eval() + + + def test_expression(self): + npv = EclNPV( self.case ) + self.assertIsNone( npv.getExpression() ) + npv.setExpression( "[FOPT]*$OIL_PRICE - [FGIT]*$GAS_PRICE") + self.assertEqual( npv.getExpression() , "[FOPT]*$OIL_PRICE - [FGIT]*$GAS_PRICE") + self.assertIn( "FOPT" , npv.getKeyList() ) + self.assertIn( "FGIT" , npv.getKeyList() ) + + with self.assertRaises(ValueError): + npv.parseExpression("[FOPT") + + with self.assertRaises(ValueError): + npv.parseExpression("FOPT]") + + with self.assertRaises(KeyError): + npv.parseExpression("[FoPT]") + + with self.assertRaises(ValueError): + npv.parseExpression("[FOPR]") + + parsedExpression = npv.parseExpression("[FOPT]") + self.assertEqual( parsedExpression , "FOPT[i]") + self.assertEqual( 1 , len(npv.getKeyList() )) + + + parsedExpression = npv.parseExpression("[FOPT]*2 + [FGPT] - [WOPT:OP_1]") + self.assertEqual( parsedExpression , "FOPT[i]*2 + FGPT[i] - WOPT_OP_1[i]") + keyList = npv.getKeyList() + self.assertEqual( 3 , len(keyList)) + self.assertIn( "FOPT" , keyList ) + self.assertIn( "FGPT" , keyList ) + self.assertIn( "WOPT:OP_1" , keyList ) + + + def test_period(self): + npv = EclNPV( self.case ) + self.assertIsNone(npv.start) + self.assertIsNone(npv.end) + self.assertEqual("1Y" , npv.interval) + + + def test_eval(self): + npv = EclNPV(self.case) + npv.compile("[FOPT]") + npv1 = npv.evalNPV() + + npv2 = 0 + sum = EclSum(self.case) + trange = sum.timeRange() + fopr = sum.blockedProduction("FOPT" , trange) + for v in fopr: + npv2 += v + self.assertAlmostEqual( npv1 , npv2 ) + + npv.compile("[FOPT] - 0.5*[FOPT] - 0.5*[FOPT]") + npv1 = npv.evalNPV() + self.assertTrue( abs(npv1) < 1e-2 ) + + npv.compile("[WOPT:OP_1] - 0.5*[WOPT:OP_1] - 0.5*[WOPT:OP_1]") + npv1 = npv.evalNPV() + self.assertTrue( abs(npv1) < 1e-2 ) + + + + def test_price_vector(self): + with self.assertRaises(ValueError): + NPVPriceVector("NotList") + + with self.assertRaises(ValueError): + NPVPriceVector(1.25) + + with self.assertRaises(ValueError): + NPVPriceVector((1,25)) + + with self.assertRaises(ValueError): + NPVPriceVector([1,2,3]) + + with self.assertRaises(ValueError): + NPVPriceVector([(1,25) , ("String",100,100)]) + + with self.assertRaises(ValueError): + NPVPriceVector([(1,25) , ("String",100)]) + + NPVPriceVector([(datetime.datetime(2010 , 1 , 1 , 0 , 0 , 0) , 100)]) + NPVPriceVector([(datetime.date(2010 , 1 , 1 ) , 100)]) + NPVPriceVector([("19/06/2010" , 100)]) + + with self.assertRaises(ValueError): + NPVPriceVector([("01/01/2000" , 100), + ("01/01/1999" , 100)]) + + with self.assertRaises(ValueError): + NPVPriceVector([("01/01/2000" , "String")]) + + NPVPriceVector([("01/01/2000" , 100)]) + NPVPriceVector([("01/01/2000" , 77.99)]) + NPVPriceVector([("01/01/2000" , callable)]) + + + vec = NPVPriceVector([("01/01/2000" , 100), + ("01/02/2000" , 200), + ("01/03/2000" , 300)]) + + with self.assertRaises(ValueError): + vec.eval( datetime.date( 1999 , 1 , 1)) + + self.assertEqual( datetime.date( 2000 , 1 , 1 ) , NPVPriceVector.assertDate( datetime.date(2000,1,1) )) + self.assertEqual( datetime.date( 2000 , 1 , 1 ) , NPVPriceVector.assertDate( CTime(datetime.date(2000,1,1)) )) + + + self.assertEqual( 100 , vec.eval( datetime.date( 2000 , 1 , 10))) + self.assertEqual( 100 , vec.eval( datetime.datetime( 2000 , 1 , 10 , 0,0,0))) + self.assertEqual( 100 , vec.eval( CTime(datetime.datetime( 2000 , 1 , 10 , 0,0,0)))) + + self.assertEqual( 300 , vec.eval( datetime.date( 2000 , 4, 1))) + + + vec = NPVPriceVector([("01/01/2000" , linear1), + ("01/02/2000" , linear2), + ("01/03/2000" , 300)]) + + self.assertEqual( 300 , vec.eval( datetime.date( 2000 , 3 , 10))) + self.assertEqual( 0 , vec.eval( datetime.date( 2000 , 1 , 1) )) + self.assertEqual( 10 , vec.eval( datetime.date( 2000 , 1 , 11) )) + self.assertEqual( 20 , vec.eval( datetime.date( 2000 , 1 , 21) )) + + self.assertEqual( 0 , vec.eval( datetime.date( 2000 , 2 , 1) )) + self.assertEqual( 20 , vec.eval( datetime.date( 2000 , 2 , 11) )) + self.assertEqual( 40 , vec.eval( datetime.date( 2000 , 2 , 21) )) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region.py index 53fd58a9bf..20a6fd231e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region.py @@ -15,7 +15,7 @@ # See the GNU General Public License at # for more details. from ert.ecl import EclFile, EclGrid, EclRegion -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class RegionTest(ExtendedTestCase): @@ -39,6 +39,19 @@ def test_kw_imul(self): fipnum.mul(-1, mask=reg) self.assertTrue(fipnum.equal(fipnum_copy)) + def test_equal(self): + reg1 = EclRegion(self.grid , False) + reg2 = EclRegion(self.grid , False) + + self.assertTrue( reg1 == reg2 ) + + reg1.select_islice(4 , 6) + self.assertFalse( reg1 == reg2 ) + reg2.select_islice(4,7) + self.assertFalse( reg1 == reg2 ) + reg1.select_islice(7,7) + self.assertTrue( reg1 == reg2 ) + def test_kw_idiv(self): P = self.rst_file["PRESSURE"][5] @@ -131,3 +144,36 @@ def test_slice(self): self.assertTrue(2 * 3 * 6 == len(reg.global_list)) + + def test_index_list(self): + reg = EclRegion(self.grid, False) + reg.select_islice(0, 5) + active_list = reg.active_list + global_list = reg.global_list + + + + def test_polygon(self): + reg = EclRegion(self.grid, False) + (x,y,z) = self.grid.get_xyz( ijk=(10,10,0) ) + dx = 0.1 + dy = 0.1 + reg.select_inside_polygon( [(x-dx,y-dy) , (x-dx,y+dy) , (x+dx,y+dy) , (x+dx,y-dy)] ) + self.assertTrue( self.grid.nz == len(reg.global_list)) + + + def test_heidrun(self): + root = self.createTestPath("Statoil/ECLIPSE/Heidrun") + grid = EclGrid( "%s/FF12_2013B2_AMAP_AOP-J15_NO62_MOVEX.EGRID" % root) + + polygon = [] + with open("%s/polygon.ply" % root) as fileH: + for line in fileH.readlines(): + tmp = line.split() + polygon.append( (float(tmp[0]) , float(tmp[1]))) + self.assertEqual( len(polygon) , 11 ) + + reg = EclRegion( grid , False ) + reg.select_inside_polygon( polygon ) + self.assertEqual( 0 , len(reg.global_list) % grid.nz) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition.py new file mode 100644 index 0000000000..f5ca78c8f4 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition.py @@ -0,0 +1,109 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_region_definition.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl.faults import FaultCollection, Fault, FaultLine, FaultSegment, RegionDefinition, FaultBlockLayer +from ert.ecl import EclGrid, EclKW, EclTypeEnum +from ert.test import ExtendedTestCase +from ert.geo import Polyline + + + +class RegionDefinitionTest(ExtendedTestCase): + def setUp(self): + self.grid = EclGrid.create_rectangular( (16,16,1) , (1,1,1) ) + self.poly1 = Polyline(init_points = [(0,0) , (0,4) , (5,5) , (0,5)]) + self.poly2 = Polyline(init_points = [(11,11) , (16,12) , (16,16) , (12,16)]) + self.fault_block_kw = EclKW.create( "FAULTBLK" , self.grid.getGlobalSize() , EclTypeEnum.ECL_INT_TYPE ) + self.fault_block_kw.assign( 0 ) + self.faults = FaultCollection( self.grid ) + for j in range(4): + for i in range(4): + g1 = i + j*self.grid.getNX() + g2 = i + 12 + (j + 12)* self.grid.getNX() + + self.fault_block_kw[g1] = 1 + self.fault_block_kw[g2] = 2 + + self.fault_blocks = [] + for k in range(self.grid.getNZ()): + block = FaultBlockLayer( self.grid , k) + block.scanKeyword( self.fault_block_kw ) + self.fault_blocks.append( block ) + + + + def test_add_edge(self): + createRegion = RegionDefinition( 1 ) + with self.assertRaises(TypeError): + createRegion.addEdge("Poly1") + + with self.assertRaises(TypeError): + createRegion.addEdge(112) + + + def test_update(self): + reg1 = RegionDefinition( 1 ) + reg2 = RegionDefinition( 2 ) + + self.assertTrue( not reg1.hasPolygon() ) + + reg1.addEdge( self.poly1 ) + reg2.addEdge( self.poly2 ) + + self.assertTrue( reg1.hasPolygon() ) + + + region_kw = EclKW.create( "REGIONS" , self.grid.getGlobalSize() , EclTypeEnum.ECL_INT_TYPE ) + region_kw.assign( 0 ) + block_list1 = [] + block_list2 = [] + + with self.assertRaises(NotImplementedError): + block_list1 = reg1.findInternalBlocks(self.grid , reg1.splitFaultBlocks(self.grid , self.fault_blocks[0])) + + with self.assertRaises(NotImplementedError): + block_list2 = reg2.findInternalBlocks(self.grid , reg2.splitFaultBlocks(self.grid , self.fault_blocks[0])) + + if block_list1: + for block in block_list1: + region_id = reg1.getRegionID() + block.assignToRegion( region_id ) + for g in block.getGlobalIndexList(): + region_kw[g] = region_id + + if block_list2: + for block in block_list2: + region_id = reg2.getRegionID() + block.assignToRegion( region_id ) + for g in block.getGlobalIndexList(): + region_kw[g] = region_id + + for j in range(4): + for i in range(4): + g1 = i + j*self.grid.getNX() + g2 = i + 12 + (j + 12)* self.grid.getNX() + + #self.assertEqual(region_kw[g1] , 1) + #self.assertEqual(region_kw[g2] , 2) + + #self.assertEqual( region_kw.sum() , 16 * 3 ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition_statoil.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition_statoil.py new file mode 100644 index 0000000000..49ae20d480 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_region_definition_statoil.py @@ -0,0 +1,77 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_region_definition_statoil.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl.faults import FaultCollection, Fault, FaultLine, FaultSegment, RegionDefinition, FaultBlockLayer +from ert.ecl import EclGrid, EclKW, EclTypeEnum +from ert.test import ExtendedTestCase +from ert.geo import Polyline + + + +class RegionDefinitionTest(ExtendedTestCase): + def setUp(self): + self.grid = EclGrid( self.createTestPath("Statoil/ECLIPSE/Mariner/MARINER.EGRID")) + + with open( self.createTestPath("Statoil/ECLIPSE/Mariner/faultblock.grdecl") ) as fileH: + self.kw = EclKW.read_grdecl( fileH , "FAULTBLK" , ecl_type = EclTypeEnum.ECL_INT_TYPE ) + + self.faults = FaultCollection( self.grid , self.createTestPath("Statoil/ECLIPSE/Mariner/faults.grdecl")) + self.poly_file1 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol1.xyz") + self.poly_file2 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol2.xyz") + self.poly_file3 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol3.xyz") + self.poly_file4 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol4.xyz") + self.poly_file5 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol5.xyz") + self.poly_file6 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol6.xyz") + self.poly_file7 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol7.xyz") + self.poly_file8 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol8.xyz") + self.poly_file9 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol9.xyz") + self.poly_file10 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol10.xyz") + self.poly_file11 = self.createTestPath("Statoil/ECLIPSE/Mariner/pol11.xyz") + + self.fault_blocks = [] + for k in range(self.grid.getNZ()): + blocks = FaultBlockLayer( self.grid , k) + blocks.scanKeyword( self.kw ) + self.fault_blocks.append( blocks ) + + + def test_create(self): + with self.assertRaises(TypeError): + regionDef = RegionDefinition( "GG" ) + + with self.assertRaises(ValueError): + regionDef = RegionDefinition.create( 1 , self.faults , ["Test" , 1]) + + regionDef = RegionDefinition.create( 1 , self.faults , ["DF28_LC" , self.poly_file1 , self.poly_file2 ]) + + + + def test_create(self): + defRegion = RegionDefinition.create( 5 , self.faults , ["DF4_MC","DF15_MC","DF43_MC","DF25_LC","DF21_C","DF1_C",self.poly_file6, "DF26_MC","DF34_MCS","DF32_MC",self.poly_file5]) + region_kw = EclKW.create( "REGIONS" , self.grid.getGlobalSize() , EclTypeEnum.ECL_INT_TYPE ) + region_kw.assign( 0 ) + + for k in range(self.grid.getNZ()): + with self.assertRaises(NotImplementedError): + block_list = defRegion.findInternalBlocks( self.grid , self.fault_blocks[k] ) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_restart.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_restart.py index 8ced2e07d3..391b07ba20 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_restart.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_restart.py @@ -18,7 +18,7 @@ import os import datetime from ert.ecl import EclFile -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase @@ -35,6 +35,7 @@ def setUp(self): def addFile( self, filename ): self.file_list.append(filename) + def tearDown(self): for f in self.file_list: if os.path.exists(f): @@ -76,11 +77,11 @@ def test_date(self): def report_list_file_test(self, fname, rlist0): rlist = EclFile.file_report_list(fname) - self.assertAlmostEqualList(rlist, rlist0) + self.assertListEqual(rlist, rlist0) f = EclFile(fname) rlist = f.report_list - self.assertAlmostEqualList(rlist, rlist0) + self.assertListEqual(rlist, rlist0) def test_report_list(self): @@ -122,7 +123,7 @@ def test_kw( self ): self.assertTrue(kw1.equal(kw2)) self.assertTrue(kw1.equal(kw3)) - - kw4 = f.restart_get_kw("SWAT", datetime.datetime(2009, 3, 1)) - self.assertIsNone(kw4) - + + with self.assertRaises(IndexError): + kw4 = f.restart_get_kw("SWAT", datetime.datetime(2009, 3, 17)) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft.py index 8c2a1106e7..9cefb40f23 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft.py @@ -18,7 +18,7 @@ import datetime from ert.ecl import EclRFTFile, EclRFTCell, EclPLTCell -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class RFTTest(ExtendedTestCase): @@ -56,6 +56,10 @@ def test_RFT_load( self ): self.assertIsInstance(cell, EclRFTCell) rft.sort() + for h in rftFile.headers: + print h + self.assertIsInstance( h[1] , datetime.date ) + def test_PLT_load( self ): pltFile = EclRFTFile(self.PLT_file) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft_cell.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft_cell.py index e6dccc3296..a9ec3ffdac 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft_cell.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_rft_cell.py @@ -18,7 +18,7 @@ import warnings from ert.ecl import EclRFTCell, EclPLTCell -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase # def out_of_range(): @@ -45,11 +45,11 @@ def test_RFT_cell(self): self.assertEqual(j, cell.get_j()) self.assertEqual(k, cell.get_k()) - self.assertAlmostEqualScaled(pressure, cell.pressure) - self.assertAlmostEqualScaled(depth, cell.depth) - self.assertAlmostEqualScaled(swat, cell.swat) - self.assertAlmostEqualScaled(sgas, cell.sgas) - self.assertAlmostEqualScaled(1 - (sgas + swat), cell.soil) + self.assertFloatEqual(pressure, cell.pressure) + self.assertFloatEqual(depth, cell.depth) + self.assertFloatEqual(swat, cell.swat) + self.assertFloatEqual(sgas, cell.sgas) + self.assertFloatEqual(1 - (sgas + swat), cell.soil) def test_PLT_cell(self): @@ -82,18 +82,18 @@ def test_PLT_cell(self): self.assertTrue(cell.get_j() + 1 == cell.j) self.assertTrue(cell.get_k() + 1 == cell.k) - self.assertAlmostEqualScaled(pressure, cell.pressure) - self.assertAlmostEqualScaled(depth, cell.depth) - self.assertAlmostEqualScaled(orat, cell.orat) - self.assertAlmostEqualScaled(grat, cell.grat) - self.assertAlmostEqualScaled(wrat, cell.wrat) - - self.assertAlmostEqualScaled(conn_start, cell.conn_start) - self.assertAlmostEqualScaled(conn_end, cell.conn_end) - self.assertAlmostEqualScaled(flowrate, cell.flowrate) - self.assertAlmostEqualScaled(oil_flowrate, cell.oil_flowrate) - self.assertAlmostEqualScaled(gas_flowrate, cell.gas_flowrate) - self.assertAlmostEqualScaled(water_flowrate, cell.water_flowrate) + self.assertFloatEqual(pressure, cell.pressure) + self.assertFloatEqual(depth, cell.depth) + self.assertFloatEqual(orat, cell.orat) + self.assertFloatEqual(grat, cell.grat) + self.assertFloatEqual(wrat, cell.wrat) + + self.assertFloatEqual(conn_start, cell.conn_start) + self.assertFloatEqual(conn_end, cell.conn_end) + self.assertFloatEqual(flowrate, cell.flowrate) + self.assertFloatEqual(oil_flowrate, cell.oil_flowrate) + self.assertFloatEqual(gas_flowrate, cell.gas_flowrate) + self.assertFloatEqual(water_flowrate, cell.water_flowrate) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_statoil_faults.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_statoil_faults.py new file mode 100644 index 0000000000..6eb17eaefb --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_statoil_faults.py @@ -0,0 +1,59 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_faults.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +import time +from ert.ecl.faults import FaultCollection, Fault, FaultLine, FaultSegment +from ert.ecl import EclGrid,EclKW,EclTypeEnum +from ert.test import ExtendedTestCase + + + +class StatoilFaultTest(ExtendedTestCase): + def loadGrid(self): + grid_file = self.createTestPath("Statoil/ECLIPSE/Faults/grid.grdecl") + fileH = open(grid_file, "r") + specgrid = EclKW.read_grdecl(fileH, "SPECGRID", ecl_type=EclTypeEnum.ECL_INT_TYPE, strict=False) + zcorn = EclKW.read_grdecl(fileH, "ZCORN") + coord = EclKW.read_grdecl(fileH, "COORD") + actnum = EclKW.read_grdecl(fileH, "ACTNUM", ecl_type=EclTypeEnum.ECL_INT_TYPE) + + return EclGrid.create(specgrid, zcorn, coord, actnum) + + + + + def test_load(self): + grid = self.loadGrid() + faults_file = self.createTestPath("Statoil/ECLIPSE/Faults/faults.grdecl") + faults = FaultCollection( grid , faults_file ) + for fault in faults: + for layer in fault: + for fl in layer: + fl.verify() + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_sum.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_sum.py index a5657bc4fd..d88f681a56 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_sum.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_sum.py @@ -26,9 +26,8 @@ from ert.ecl import EclSum from ert.util import StringList, TimeVector, DoubleVector -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext base = "ECLIPSE" @@ -56,6 +55,29 @@ def test_load(self): self.assertIsNotNone(self.ecl_sum, "Load failed") + def test_invalid(self): + with self.assertRaises(AssertionError): + sum = EclSum("Does/not/exist") + + + def test_KeyError(self): + sum = self.ecl_sum + with self.assertRaises(KeyError): + v = sum["KeyMissing"] + + with self.assertRaises(KeyError): + v = sum.get_interp("Missing" , days = 750) + + with self.assertRaises(KeyError): + v = sum.get_interp_vector("Missing" , days_list = [750]) + + + + def test_contains(self): + self.assertTrue( "FOPT" in self.ecl_sum) + self.assertFalse( "MISSING" in self.ecl_sum ) + + def test_interp(self): sum = self.ecl_sum @@ -68,28 +90,53 @@ def test_interp(self): v = sum.get_interp_vector("WGPT:OP_2", date_list=[datetime.date(2002, 1, 1), datetime.date(2003, 1, 1), datetime.date(2004, 1, 1)]) self.assertAlmostEqualList(v, [8.20773632e+08, 9.68444032e+08, 1.02515213e+09]) + self.assertEqual(sum.get_interp("FOPT" , days = 0) , 0) + + self.assertEqual(sum.get_interp("WOPR:OP_1" , days = 0) , 0) + self.assertEqual(sum.get_interp("WOPR:OP_1" , date=datetime.date(2000,1,1)) , 0) + + self.assertEqual(sum.get_interp("WOPR:OP_1" , days = 31) , 7996) + self.assertEqual(sum.get_interp("WOPR:OP_1" , date=datetime.date(2000,2,1)) , 7996) + + FPR = sum["FPR"] + self.assertFloatEqual(sum.get_interp("FPR" , days = 0) , FPR[0].value) + self.assertFloatEqual(sum.get_interp("FPR" , days = 31) , FPR[1].value) + + with self.assertRaises(ValueError): + sum.get_interp("WOPR:OP_1") + + with self.assertRaises(ValueError): + sum.get_interp("WOPR:OP_1" , days=10 , date = datetime.date(2000,1,1)) + + + def test_LLINEAR(self): + sum = EclSum( self.createTestPath("Statoil/ECLIPSE/Heidrun/LGRISSUE/EM-LTAA-ISEG_CARFIN_NWPROPS")) + self.assertTrue( sum.has_key("LLINEARS") ) + + def test_wells(self): wells = self.ecl_sum.wells() wells.sort() - self.assertAlmostEqualList(wells, ["OP_1", "OP_2", "OP_3", "OP_4", "OP_5", "WI_1", "WI_2", "WI_3"]) + self.assertListEqual([well for well in wells], ["OP_1", "OP_2", "OP_3", "OP_4", "OP_5", "WI_1", "WI_2", "WI_3"]) wells = self.ecl_sum.wells(pattern="*_3") wells.sort() - self.assertAlmostEqualList(wells, ["OP_3", "WI_3"]) + self.assertListEqual([well for well in wells], ["OP_3", "WI_3"]) groups = self.ecl_sum.groups() groups.sort() - self.assertAlmostEqualList(groups, ['GMWIN', 'OP', 'WI']) + self.assertListEqual([group for group in groups], ['GMWIN', 'OP', 'WI']) def test_last( self ): last = self.ecl_sum.get_last("FOPT") - self.assertAlmostEqual(last.value, 38006336.0) - self.assertAlmostEqual(last.days, 1826.0) + self.assertFloatEqual(last.value, 38006336.0) + self.assertFloatEqual(last.days, 1826.0) self.assertEqual(last.date, datetime.datetime(2004, 12, 31, 0, 0, 0)) - self.assertAlmostEqual(self.ecl_sum.get_last_value("FGPT"), 6605249024.0) + self.assertFloatEqual(self.ecl_sum.get_last_value("FGPT"), 6605249024.0) + self.assertEqual( len(self.ecl_sum) , 63 ) def test_dates( self ): @@ -111,6 +158,17 @@ def test_dates( self ): self.assertEqual(sum.start_time, datetime.datetime(2000, 1, 1, 0, 0, 0)) self.assertEqual(sum.end_time, datetime.datetime(2004, 12, 31, 0, 0, 0)) self.assertTrue(sum.check_sim_time(datetime.datetime(2004, 12, 31, 0, 0, 0))) + self.assertEqual(sum.end_date , datetime.date(2004, 12, 31)) + + + + def test_dates2( self ): + sum = EclSum(self.createTestPath("Statoil/ECLIPSE/FF12/FF12_2013B3_AMAP2")) + self.assertEqual(sum.end_date , datetime.date(2045, 1, 1)) + + + + def test_keys(self): sum = self.ecl_sum @@ -141,7 +199,7 @@ def test_report(self): self.assertEqual(sum.last_report, 62) self.assertEqual(sum.get_report_time(10), datetime.date(2000, 10, 1)) - self.assertAlmostEqualScaled(sum.get_from_report("FOPT", 10), 6.67447e+06) + self.assertFloatEqual(sum.get_from_report("FOPT", 10), 6.67447e+06) @skipIf(ExtendedTestCase.slowTestShouldNotRun(), "Slow test skipped") @@ -243,7 +301,7 @@ def test_stringlist_gc(self): def test_stringlist_reference(self): sum = EclSum(self.case) wells = sum.wells() - self.assertAlmostEqualList(wells, ['OP_1', 'OP_2', 'OP_3', 'OP_4', 'OP_5', 'WI_1', 'WI_2', 'WI_3']) + self.assertListEqual([well for well in wells], ['OP_1', 'OP_2', 'OP_3', 'OP_4', 'OP_5', 'WI_1', 'WI_2', 'WI_3']) self.assertIsInstance(wells, StringList) @@ -273,5 +331,92 @@ def test_return_types(self): key_index = self.ecl_sum.get_general_var_index("FOPT") self.assertIsInstance(self.ecl_sum.alloc_data_vector(key_index, True), DoubleVector) + def test_timeRange(self): + sum = EclSum(self.case) + with self.assertRaises(TypeError): + trange = sum.timeRange(interval = "1") + trange = sum.timeRange(interval = "1X") + trange = sum.timeRange(interval = "YY") + trange = sum.timeRange(interval = "MY") + + with self.assertRaises(ValueError): + trange = sum.timeRange( start = datetime.datetime(2000,1,1) , end = datetime.datetime(1999,1,1) ) + + sim_start = datetime.datetime(2000, 1, 1, 0, 0, 0) + sim_end = datetime.datetime(2004, 12, 31, 0, 0, 0) + trange = sum.timeRange( interval = "1Y") + self.assertTrue( trange[0] == datetime.date( 2000 , 1 , 1 )) + self.assertTrue( trange[1] == datetime.date( 2001 , 1 , 1 )) + self.assertTrue( trange[2] == datetime.date( 2002 , 1 , 1 )) + self.assertTrue( trange[3] == datetime.date( 2003 , 1 , 1 )) + self.assertTrue( trange[4] == datetime.date( 2004 , 1 , 1 )) + self.assertTrue( trange[5] == datetime.date( 2005 , 1 , 1 )) + + trange = sum.timeRange( interval = "1M") + self.assertTrue( trange[0] == datetime.date( 2000 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2005 , 1 , 1 )) + + trange = sum.timeRange( start = datetime.date( 2002 , 1 , 15), interval = "1M") + self.assertTrue( trange[0] == datetime.date( 2002 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2005 , 1 , 1 )) + + trange = sum.timeRange( start = datetime.date( 2002 , 1 , 15) , end = datetime.date( 2003 , 1 , 15), interval = "1M") + self.assertTrue( trange[0] == datetime.date( 2002 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2003 , 2 , 1 )) + + trange = sum.timeRange( start = datetime.date( 2002 , 1 , 15) , end = datetime.datetime( 2003 , 1 , 15,0,0,0), interval = "1M") + self.assertTrue( trange[0] == datetime.date( 2002 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2003 , 2 , 1 )) + + + + # Loading this dataset is a test of loading a case where one report step is missing. + def test_Heidrun(self): + sum = EclSum( self.createTestPath("Statoil/ECLIPSE/Heidrun/Summary/FF12_2013B3_CLEAN_RS")) + self.assertEqual( 452 , len(sum)) + self.assertFloatEqual( 1.8533144e+8 , sum.get_last_value("FOPT")) + + def test_regularProduction(self): + sum = EclSum(self.case) + with self.assertRaises(TypeError): + trange = TimeVector.createRegular( sum.start_time , sum.end_time , "1M" ) + prod = sum.blockedProduction("FOPR" , trange) + + with self.assertRaises(KeyError): + trange = TimeVector.createRegular( sum.start_time , sum.end_time , "1M" ) + prod = sum.blockedProduction("NoNotThis" , trange) + + trange = sum.timeRange(interval = "2Y") + self.assertTrue( trange[0] == datetime.date( 2000 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2006 , 1 , 1 )) + + trange = sum.timeRange(interval = "5Y") + self.assertTrue( trange[0] == datetime.date( 2000 , 1 , 1 )) + self.assertTrue( trange[-1] == datetime.date( 2005 , 1 , 1 )) + + trange = sum.timeRange(interval = "6M") + wprod1 = sum.blockedProduction("WOPT:OP_1" , trange) + wprod2 = sum.blockedProduction("WOPT:OP_2" , trange) + wprod3 = sum.blockedProduction("WOPT:OP_3" , trange) + wprod4 = sum.blockedProduction("WOPT:OP_4" , trange) + wprod5 = sum.blockedProduction("WOPT:OP_5" , trange) + + fprod = sum.blockedProduction("FOPT" , trange) + gprod = sum.blockedProduction("GOPT:OP" , trange) + wprod = wprod1 + wprod2 + wprod3 + wprod4 + wprod5 + for (w,f,g) in zip(wprod, fprod,gprod): + self.assertFloatEqual( w , f ) + self.assertFloatEqual( w , g ) + + + + def test_writer(self): + writer = EclSum.writer("CASE" , datetime.date( 2000 , 1 , 1) , 10 , 10 , 5) + self.assertIsInstance(self.ecl_sum, EclSum) - + + writer.addVariable( "FOPT" ) + self.assertTrue( writer.has_key( "FOPT" )) + + writer.addTStep( 1 , 100 ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/__init__.py new file mode 100644 index 0000000000..8b13789179 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/__init__.py @@ -0,0 +1 @@ + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data_config.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data_config.py new file mode 100644 index 0000000000..f8748b3984 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data_config.py @@ -0,0 +1,74 @@ +from ert.cwrap import clib, CWrapper +from ert.enkf.data.enkf_node import EnkfNode +from ert.enkf.enums.enkf_state_type_enum import EnkfStateType +from ert.enkf.node_id import NodeId +from ert.test import ErtTestContext +from ert.test.extended_testcase import ExtendedTestCase +from ert.util import BoolVector + +test_lib = clib.ert_load("libenkf") +cwrapper = CWrapper(test_lib) + +get_active_mask = cwrapper.prototype("bool_vector_ref gen_data_config_get_active_mask( gen_data_config )") +update_active_mask = cwrapper.prototype("void gen_data_config_update_active( gen_data_config, int, bool_vector)") + +class GenDataConfigTest(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_GEN_DATA/config") + + def load_active_masks(self, case1, case2 ): + with ErtTestContext("gen_data_config_test", self.config_file) as test_context: + ert = test_context.getErt() + + fs1 = ert.getEnkfFsManager().getFileSystem(case1) + config_node = ert.ensembleConfig().getNode("TIMESHIFT") + data_node = EnkfNode(config_node) + data_node.tryLoad(fs1, NodeId(60, 0, EnkfStateType.FORECAST)) + + active_mask = get_active_mask( config_node.getDataModelConfig() ) + first_active_mask_length = len(active_mask) + self.assertEqual(first_active_mask_length, 2560) + + fs2 = ert.getEnkfFsManager().getFileSystem(case2) + data_node = EnkfNode(config_node) + data_node.tryLoad(fs2, NodeId(60, 0, EnkfStateType.FORECAST)) + + active_mask = get_active_mask( config_node.getDataModelConfig() ) + second_active_mask_len = len(active_mask) + self.assertEqual(second_active_mask_len, 2560) + self.assertEqual(first_active_mask_length, second_active_mask_len) + + # Setting one element to False, load different case, check, reload, and check. + self.assertTrue(BoolVector.cNamespace().iget(active_mask, 10)) + active_mask_modified = active_mask.copy() + active_mask_modified[10] = False + + # Must switch filesystem, because the update mask (writes to storage) + # functionality uses the current filesystem (current case) + ert.getEnkfFsManager().switchFileSystem(fs2) + update_active_mask(config_node.getDataModelConfig(), 60, active_mask_modified) + active_mask = get_active_mask( config_node.getDataModelConfig() ) + self.assertFalse(active_mask[10]) + + #Load first - check element is true + data_node = EnkfNode(config_node) + data_node.tryLoad(fs1, NodeId(60, 0, EnkfStateType.FORECAST)) + active_mask = get_active_mask( config_node.getDataModelConfig() ) + self.assertTrue(active_mask[10]) + + # Reload second again, should now be false at 10, due to the update further up + data_node = EnkfNode(config_node) + data_node.tryLoad(fs2, NodeId(60, 0, EnkfStateType.FORECAST)) + active_mask = get_active_mask( config_node.getDataModelConfig() ) + self.assertFalse(active_mask[10]) + + + def test_loading_two_cases_with_and_without_active_file(self): + self.load_active_masks("missing-active", "default") + + + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py new file mode 100644 index 0000000000..e85c448f82 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py @@ -0,0 +1,73 @@ +from ert.enkf.data import GenKw, GenKwConfig +from ert.test import TestAreaContext, ExtendedTestCase + + +class GenKwTest(ExtendedTestCase): + + def test_gen_kw_get_set(self): + with TestAreaContext("enkf/data/gen_kwt"): + parameter_file ="MULTFLT.txt" + with open(parameter_file, "w") as f: + f.write("MULTFLT NORMAL 0 1") + + gen_kw_config = GenKwConfig("MULTFLT", "%s", "MULTFLT.txt") + + gen_kw = GenKw(gen_kw_config) + self.assertIsInstance(gen_kw, GenKw) + + gen_kw[0] = 3.0 + self.assertEqual(gen_kw[0], 3.0) + + gen_kw["MULTFLT"] = 4.0 + self.assertEqual(gen_kw["MULTFLT"], 4.0) + self.assertEqual(gen_kw[0], 4.0) + + self.assertEqual(len(gen_kw), 1) + + with self.assertRaises(IndexError): + gen_kw[1] + + with self.assertRaises(TypeError): + gen_kw[1.5] + + with self.assertRaises(KeyError): + gen_kw["MULTFLT_2"] + + self.assertTrue("MULTFLT" in gen_kw ) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/__init__.py new file mode 100644 index 0000000000..284bf2e772 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/__init__.py @@ -0,0 +1 @@ +__author__ = 'jpb' diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/test_plot_data.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/test_plot_data.py new file mode 100644 index 0000000000..41c27231a3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/plot/test_plot_data.py @@ -0,0 +1,101 @@ +from ert.enkf.plot_data import PlotBlockData, PlotBlockDataLoader, PlotBlockVector +from ert.util import DoubleVector +from ert.test import ExtendedTestCase, ErtTestContext + + +class PlotDataTest(ExtendedTestCase): + + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_RFT/config") + + def test_plot_block_vector(self): + vector = DoubleVector() + vector.append(1.5) + vector.append(2.5) + vector.append(3.5) + plot_block_vector = PlotBlockVector(1, vector) + + self.assertEqual(plot_block_vector.getRealizationNumber(), 1) + self.assertEqual(plot_block_vector[0], 1.5) + self.assertEqual(plot_block_vector[2], 3.5) + + self.assertEqual(len(plot_block_vector), len(vector)) + + + def test_plot_block_data(self): + depth = DoubleVector() + depth.append(2.5) + depth.append(3.5) + + data = PlotBlockData(depth) + + self.assertEqual(data.getDepth(), depth) + + vector = PlotBlockVector(1, DoubleVector()) + data.addPlotBlockVector(vector) + data.addPlotBlockVector(PlotBlockVector(2, DoubleVector())) + + self.assertEqual(len(data), 2) + + self.assertEqual(vector, data[1]) + + + def compareLists(self, source, target): + self.assertEqual(len(source), len(target)) + for index, value in enumerate(source): + self.assertEqual(value, target[index]) + + + def checkBlockData(self, ert, obs_key, report_step): + """ + @type ert: EnKFMain + @type obs_key: str + @type report_step: int + """ + enkf_obs = ert.getObservations() + obs_vector = enkf_obs[obs_key] + loader = PlotBlockDataLoader(obs_vector) + + fs = ert.getEnkfFsManager().getCurrentFileSystem() + plot_block_data = loader.load(fs, report_step) + + self.assertEqual(ert.getEnsembleSize(), len(plot_block_data)) + + depth = plot_block_data.getDepth() + + depth_test_values = [1752.24998474, 1757.88926697, 1760.70924377] + if report_step == 56: + depth_test_values.append(1763.52885437) + + self.assertAlmostEqualList(depth_test_values, depth) + + block_obs = len(obs_vector.getNode(report_step)) + self.assertEqual(block_obs, len(plot_block_data[0])) + self.assertEqual(block_obs, len(plot_block_data[9])) + + + if report_step == 50: + rft_values = [244.681655884, 245.217041016, 245.48500061] + else: + rft_values = [239.7550354, 240.290313721, 240.558197021, 240.825881958] + + self.assertAlmostEqualList(rft_values, plot_block_data[0]) + + + if report_step == 50: + rft_values = [238.702560425, 239.237838745, 239.505737305] + else: + rft_values = [234.41583252, 234.95098877, 235.218841553, 235.486480713] + + self.assertAlmostEqualList(rft_values, plot_block_data[9]) + + + + + def test_plot_block_data_fs(self): + with ErtTestContext("plot_block_data_test", self.config_file) as test_context: + ert = test_context.getErt() + + self.checkBlockData(ert, "RFT2", 50) + self.checkBlockData(ert, "RFT5", 56) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_config.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_config.py index 5328b49d74..201f858173 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_config.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_config.py @@ -17,7 +17,7 @@ import os from ert.enkf import AnalysisConfig -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class AnalysisConfigTest(ExtendedTestCase): @@ -25,7 +25,7 @@ class AnalysisConfigTest(ExtendedTestCase): def test_keywords_for_monitoring_simulation_runtime(self): ac = AnalysisConfig() ac.set_min_realisations( 100 ) - self.assertEqual( 100 , ac.get_min_realisations() ) + self.assertEqual( 100 , ac.getMinRealisations() ) ac.set_max_runtime( 50 ) self.assertEqual( 50 , ac.get_max_runtime() ) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_iter_config.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_iter_config.py new file mode 100644 index 0000000000..dfe7f9d13e --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_analysis_iter_config.py @@ -0,0 +1,37 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_analysis_iter_config.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os +from ert.enkf import AnalysisIterConfig +from ert.test import ExtendedTestCase + + +class AnalysisIterConfigTest(ExtendedTestCase): + + def test_set(self): + c = AnalysisIterConfig() + + self.assertFalse( c.caseFormatSet() ) + c.setCaseFormat("case%d") + self.assertTrue( c.caseFormatSet() ) + + self.assertFalse( c.numIterationsSet() ) + c.setNumIterations(1) + self.assertTrue( c.numIterationsSet() ) + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ecl_config.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ecl_config.py index 3fcd27fa30..bd7f66ebde 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ecl_config.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ecl_config.py @@ -18,7 +18,7 @@ import os import os.path from ert.enkf import EclConfig -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase from ert.util import UIReturn from ert.ecl import EclSum diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py index 75f4d5802e..98bbf0b0c9 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py @@ -20,9 +20,10 @@ from ert.enkf.data import EnkfConfigNode from ert.enkf.enkf_main import EnKFMain from ert.enkf.enums import EnkfObservationImplementationType, LoadFailTypeEnum, EnkfInitModeEnum, ErtImplType, RealizationStateEnum +from ert.enkf.enums.enkf_field_file_format_enum import EnkfFieldFileFormatEnum +from ert.enkf.enums.enkf_truncation_type import EnkfTruncationType from ert.enkf.observations.summary_observation import SummaryObservation -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext @@ -39,6 +40,7 @@ def test_bootstrap( self ): self.assertTrue(main, "Load failed") main.free() + def test_enum(self): self.assertEnumIsFullyDefined(EnkfVarType, "enkf_var_type", "libenkf/include/ert/enkf/enkf_types.h") @@ -46,9 +48,11 @@ def test_enum(self): self.assertEnumIsFullyDefined(ErtImplType, "ert_impl_type", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(EnkfInitModeEnum, "init_mode_enum", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(RealizationStateEnum, "realisation_state_enum", "libenkf/include/ert/enkf/enkf_types.h") + self.assertEnumIsFullyDefined(EnkfTruncationType, "truncation_type", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(EnkfObservationImplementationType, "obs_impl_type", "libenkf/include/ert/enkf/obs_vector.h") self.assertEnumIsFullyDefined(LoadFailTypeEnum, "load_fail_type", "libenkf/include/ert/enkf/summary_config.h") + self.assertEnumIsFullyDefined(EnkfFieldFileFormatEnum, "field_file_format_type", "libenkf/include/ert/enkf/field_config.h" ) self.assertEqual(EnkfRunEnum.ENKF_ASSIMILATION, 1) self.assertEqual(EnkfRunEnum.ENSEMBLE_EXPERIMENT, 2) @@ -80,7 +84,9 @@ def test_observations(self): observations = main.getObservations() - test_vector = observations.getObservationsVector(observation_key) + test_vector = observations[observation_key] + + self.assertListEqual(range(10), [report_step for report_step in test_vector]) self.assertEqual(observation_vector, test_vector) for index, value, std in values: @@ -110,13 +116,26 @@ def test_config( self ): #self.assertIsInstance(main.local_config(), LocalConfig) #warn: Should this be None? self.assertIsInstance(main.siteConfig(), SiteConfig) self.assertIsInstance(main.eclConfig(), EclConfig) - self.assertIsInstance(main.plot_config(), PlotConfig) + self.assertIsInstance(main.plotConfig(), PlotConfig) # self.main.load_obs(obs_config_file) self.assertIsInstance(main.getObservations(), EnkfObs) self.assertIsInstance(main.get_templates(), ErtTemplates) - self.assertIsInstance(main.getEnkfFsManager().getFileSystem(), EnkfFs) + self.assertIsInstance(main.getEnkfFsManager().getCurrentFileSystem(), EnkfFs) # self.assertIsInstance(main.iget_member_config(0), MemberConfig) self.assertIsInstance(main.getMemberRunningState(0), EnKFState) + self.assertEqual( "Ensemble" , main.getMountPoint()) + main.free() + + def test_enkf_create_config_file(self): + config_file = "test_new_config" + firste_case_name = "default_1" + dbase_type = "BLOCK_FS" + num_realizations = 42 + + with TestAreaContext("python/ens_condif/create_config" , store_area = True) as ta: + EnKFMain.createNewConfig(config_file, "storage" , firste_case_name, dbase_type, num_realizations) + main = EnKFMain(config_file, self.site_config_file) + self.assertEqual(main.getEnsembleSize(), num_realizations) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py new file mode 100644 index 0000000000..3bb9720dee --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py @@ -0,0 +1,51 @@ +import os +from ert.enkf import EnkfFs +from ert.enkf import EnKFMain +from ert.enkf.enums import EnKFFSType +from ert.test import ExtendedTestCase , TestAreaContext +from ert.test import ErtTestContext + + +class EnKFFSTest(ExtendedTestCase): + def setUp(self): + self.mount_point = "storage/default" + self.config_file = self.createTestPath("Statoil/config/with_data/config") + + + def test_id_enum(self): + self.assertEnumIsFullyDefined(EnKFFSType, "fs_driver_impl", "libenkf/include/ert/enkf/fs_types.h") + + + def test_create(self): + with TestAreaContext("create_fs") as work_area: + work_area.copy_parent_content(self.config_file) + + self.assertTrue(EnkfFs.exists(self.mount_point)) + fs = EnkfFs(self.mount_point) + self.assertEqual(1, fs.refCount()) + fs.umount() + + self.assertFalse(EnkfFs.exists("newFS")) + arg = None + EnkfFs.createFileSystem("newFS", EnKFFSType.BLOCK_FS_DRIVER_ID, arg) + self.assertTrue(EnkfFs.exists("newFS")) + + + def test_throws(self): + with self.assertRaises(Exception): + fs = EnkfFs("/does/not/exist") + + + def test_refcount(self): + with ErtTestContext("TEST", self.config_file) as testContext: + ert = testContext.getErt() + self.assertTrue(isinstance(ert, EnKFMain)) + + fsm = ert.getEnkfFsManager() + fs = fsm.getCurrentFileSystem() + self.assertEqual(2, fs.refCount()) + + fs.umount() + + with self.assertRaises(AssertionError): + fs.refCount() diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager1.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager1.py new file mode 100644 index 0000000000..3f3bbd4047 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager1.py @@ -0,0 +1,30 @@ +import os +from ert.enkf import EnkfFs +from ert.enkf import EnKFMain +from ert.enkf import EnkfFsManager +from ert.test import ErtTestContext +from ert.test import ExtendedTestCase + + +class EnKFFSManagerTest1(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_data/config") + + + def test_create(self): + # We are indirectly testing the create through the create + # already in the enkf_main object. In principle we could + # create a separate manager instance from the ground up, but + # then the reference count will be weird. + with ErtTestContext("enkf_fs_manager_create_test", self.config_file) as testContext: + ert = testContext.getErt() + fsm = ert.getEnkfFsManager() + + fs = fsm.getCurrentFileSystem() + self.assertEqual(2, fs.refCount()) + self.assertEqual(1, fsm.getFileSystemCount()) + + fs2 = fsm.getFileSystem("newFS") + self.assertEqual(2, fsm.getFileSystemCount()) + self.assertEqual(1, fs2.refCount()) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager2.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager2.py new file mode 100644 index 0000000000..1441407ddd --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs_manager2.py @@ -0,0 +1,37 @@ +import os +from ert.enkf import EnkfFs +from ert.enkf import EnKFMain +from ert.enkf import EnkfFsManager +from ert.test import ErtTestContext +from ert.test import ExtendedTestCase + + +class EnKFFSManagerTest2(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_data/config") + + + def test_rotate(self): + + # We are indirectly testing the create through the create + # already in the enkf_main object. In principle we could + # create a separate manager instance from the ground up, but + # then the reference count will be weird. + with ErtTestContext("enkf_fs_manager_rotate_test", self.config_file) as testContext: + ert = testContext.getErt() + fsm = ert.getEnkfFsManager() + self.assertEqual(1, fsm.getFileSystemCount()) + + fs_list = [] + for index in range(EnkfFsManager.DEFAULT_CAPACITY): + fs_list.append(fsm.getFileSystem("fs_fill_%d" % index)) + + self.assertEqual(EnkfFsManager.DEFAULT_CAPACITY, fsm.getFileSystemCount()) + + for i in range(10): + fs = "fs_test_%d" % i + print("Mounting: %s" % fs) + fs_list.append(fsm.getFileSystem(fs)) + self.assertEqual(EnkfFsManager.DEFAULT_CAPACITY, fsm.getFileSystemCount()) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py index 09d4681cb1..8651039052 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py @@ -1,13 +1,12 @@ import os from ert.ecl import EclSum -from ert.enkf import BlockObs, AnalysisConfig, EclConfig, GenKwConfig, EnkfConfigNode, SiteConfig, ObsVector +from ert.enkf import AnalysisConfig, EclConfig, GenKwConfig, EnkfConfigNode, SiteConfig, ObsVector from ert.enkf import GenDataConfig, FieldConfig, EnkfFs, EnkfObs, EnKFState, EnsConfig from ert.enkf import ErtTemplate, ErtTemplates, LocalConfig, ModelConfig, PlotConfig from ert.enkf.enkf_main import EnKFMain from ert.enkf.util import TimeMap -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext class EnKFLibraryTest(ExtendedTestCase): @@ -17,8 +16,8 @@ def setUp(self): def test_failed_class_creation(self): - classes = [BlockObs, FieldConfig, GenKwConfig, GenDataConfig, - EnkfConfigNode, EnkfFs, EnkfObs, TimeMap, EnKFState, EnsConfig, + classes = [FieldConfig, GenDataConfig, + EnkfConfigNode, EnkfObs, EnKFState, EnsConfig, ErtTemplate, ErtTemplates, LocalConfig, ModelConfig, PlotConfig, SiteConfig] for cls in classes: @@ -38,9 +37,9 @@ def test_ecl_config_creation(self): with self.assertRaises(ValueError): # Null pointer! self.assertIsInstance(main.eclConfig().getRefcase(), EclSum) - file_system = main.getEnkfFsManager().getFileSystem() + file_system = main.getEnkfFsManager().getCurrentFileSystem() self.assertEqual(file_system.getCaseName(), "default") - time_map = file_system.get_time_map() + time_map = file_system.getTimeMap() self.assertIsInstance(time_map, TimeMap) main.free() diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_load_results_manually.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_load_results_manually.py new file mode 100644 index 0000000000..43ef9377b7 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_load_results_manually.py @@ -0,0 +1,44 @@ +from ert.enkf.enums.realization_state_enum import RealizationStateEnum +from ert.test import ErtTestContext, ExtendedTestCase +from ert.util import BoolVector + + +class LoadResultsManuallyTest(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_data/config") + + def test_load_results_manually(self): + with ErtTestContext("manual_load_test", self.config_file) as test_context: + ert = test_context.getErt() + load_into_case = "A1" + load_from_case = "default" + + load_into = ert.getEnkfFsManager().getFileSystem(load_into_case) + load_from = ert.getEnkfFsManager().getFileSystem(load_from_case) + + ert.getEnkfFsManager().switchFileSystem(load_from) + realisations = BoolVector(default_value=True,initial_size=25) + realisations[7] = False + iteration = 0 + + ert.loadFromForwardModel(realisations, iteration, load_into) + + load_into_case_state_map = load_into.getStateMap() + + load_into_states = [state for state in load_into_case_state_map] + + expected = [RealizationStateEnum.STATE_HAS_DATA] * 25 + expected[7] = RealizationStateEnum.STATE_UNDEFINED + + self.assertListEqual(load_into_states, expected) + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_obs.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_obs.py new file mode 100644 index 0000000000..fead4bfcdd --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_obs.py @@ -0,0 +1,36 @@ +from ert.enkf import ObsVector +from ert.util import BoolVector +from ert.test import ErtTestContext +from ert.test import ExtendedTestCase + + +class EnKFObsTest(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/obs_testing/config") + + def testObs(self): + with ErtTestContext("obs_test", self.config_file) as test_context: + ert = test_context.getErt() + obs = ert.getObservations() + + self.assertEqual(31, len(obs)) + for v in obs: + self.assertTrue(isinstance(v, ObsVector)) + + with self.assertRaises(IndexError): + v = obs[-1] + + with self.assertRaises(IndexError): + v = obs[40] + + with self.assertRaises(KeyError): + v = obs["No-this-does-not-exist"] + + v1 = obs["WWCT:OP_3"] + v2 = obs["GOPT:OP"] + mask = BoolVector(True, ert.getEnsembleSize()) + current_fs = ert.getEnkfFsManager().getCurrentFileSystem() + + self.assertTrue(v1.hasData(mask, current_fs)) + self.assertFalse(v2.hasData(mask, current_fs)) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_context.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_context.py new file mode 100644 index 0000000000..6356f653d2 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_context.py @@ -0,0 +1,95 @@ +from ert.test import ErtTestContext, ExtendedTestCase + + +class ErtTestContextTest(ExtendedTestCase): + def setUp(self): + self.config = self.createTestPath("Statoil/config/with_data/config") + + def test_raises(self): + with self.assertRaises(IOError): + testContext = ErtTestContext("ExistTest" , "Does/not/exist") + + + def initFromCaseTest(self, context, root_path): + ert = context.getErt() + + init_case_job = self.createSharePath("%s/INIT_CASE_FROM_EXISTING" % root_path) + self.assertTrue(context.installWorkflowJob("INIT_CASE_JOB", init_case_job)) + self.assertTrue(context.runWorkflowJob("INIT_CASE_JOB", "default", "new_not_current_case")) + + default_fs = ert.getEnkfFsManager().getFileSystem("default") + new_fs = ert.getEnkfFsManager().getFileSystem("new_not_current_case") + + self.assertIsNotNone(default_fs) + self.assertIsNotNone(new_fs) + + self.assertTrue(len(default_fs.getStateMap()) > 0) + self.assertEqual(len(default_fs.getStateMap()), len(new_fs.getStateMap())) + + + def createCaseTest(self, context, root_path): + create_case_job = self.createSharePath("%s/CREATE_CASE" % root_path) + self.assertTrue(context.installWorkflowJob("CREATE_CASE_JOB", create_case_job)) + self.assertTrue(context.runWorkflowJob("CREATE_CASE_JOB", "newly_created_case")) + self.assertDirectoryExists("storage/newly_created_case") + + + def selectCaseTest(self, context, root_path): + ert = context.getErt() + select_case_job = self.createSharePath("%s/SELECT_CASE" % root_path) + + default_fs = ert.getEnkfFsManager().getCurrentFileSystem() + + custom_fs = ert.getEnkfFsManager().getFileSystem("CustomCase") + + self.assertEqual(ert.getEnkfFsManager().getCurrentFileSystem(), default_fs) + + self.assertTrue(context.installWorkflowJob("SELECT_CASE_JOB", select_case_job)) + self.assertTrue(context.runWorkflowJob("SELECT_CASE_JOB", "CustomCase")) + + self.assertEqual(ert.getEnkfFsManager().getCurrentFileSystem(), custom_fs) + + + def loadResultsTest(self, context): + load_results_job = self.createSharePath("workflows/jobs/internal/config/LOAD_RESULTS") + self.assertTrue(context.installWorkflowJob("LOAD_RESULTS_JOB", load_results_job)) + self.assertTrue(context.runWorkflowJob("LOAD_RESULTS_JOB", 0, 1)) + + + def rankRealizationsOnObservationsTest(self, context): + rank_job = self.createSharePath("workflows/jobs/internal/config/OBSERVATION_RANKING") + + self.assertTrue(context.installWorkflowJob("OBS_RANK_JOB", rank_job)) + + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking1", "|", "WOPR:*")) + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking2", "1-5", "55", "|", "WWCT:*", "WOPR:*")) + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking3", "5", "55", "|")) + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking4", "1,3,5-10", "55")) + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking5")) + self.assertTrue(context.runWorkflowJob("OBS_RANK_JOB", "NameOfObsRanking6", "|", "UnrecognizableObservation")) + + + def test_workflow_function_jobs(self): + + with ErtTestContext("python/enkf/ert_test_context_workflow_function_job", self.config) as context: + internal_config = "workflows/jobs/internal-tui/config" + self.createCaseTest(context, root_path=internal_config) + self.selectCaseTest(context, root_path=internal_config) + + # Due to EnKFFs caching and unmonitored C functions this will fail + #self.initFromCaseTest(context, root_path=internal_config) + + self.loadResultsTest(context) + self.rankRealizationsOnObservationsTest(context) + + + + def test_workflow_ert_script_jobs(self): + + with ErtTestContext("python/enkf/ert_test_context_workflow_ert_script_job", self.config) as context: + ert_scripts_config = "workflows/jobs/internal-gui/config" + self.createCaseTest(context, root_path=ert_scripts_config) + self.selectCaseTest(context, root_path=ert_scripts_config) + self.initFromCaseTest(context, root_path=ert_scripts_config) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_log.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_log.py new file mode 100644 index 0000000000..6cf7d293a8 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_ert_log.py @@ -0,0 +1,20 @@ +import os +from ert.enkf import ErtLog +from ert.test import ExtendedTestCase, TestAreaContext + + +class ErtLogTest(ExtendedTestCase): + + def test_write_log(self): + with TestAreaContext("python/ert_log/log") as work_area: + test_log_filename = "test_log" + ErtLog.cnamespace.init(1, test_log_filename, "unittester", True) + message = "This is fun" + ErtLog.log(1, message) + + self.assertTrue(os.path.isfile(test_log_filename)) + + with open(test_log_filename, "r") as f: + text = f.readlines() + self.assertTrue(len(text) > 0) + self.assertTrue(message in text[-1]) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_state_map.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_state_map.py index f8c4a436c6..12ae3238fe 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_state_map.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_state_map.py @@ -1,6 +1,7 @@ from ert.enkf.enums.realization_state_enum import RealizationStateEnum from ert.enkf.state_map import StateMap -from ert_tests import ExtendedTestCase +from ert.test import TestAreaContext +from ert.test import ExtendedTestCase class StateMapTest(ExtendedTestCase): @@ -13,6 +14,12 @@ def test_state_map(self): with self.assertRaises(TypeError): r = state_map["r"] + with self.assertRaises(IOError): + s2 = StateMap("DoesNotExist") + + with self.assertRaises(IOError): + state_map.load("/file/does/not/exist") + with self.assertRaises(IndexError): v = state_map[0] @@ -55,6 +62,12 @@ def test_state_map(self): self.assertFalse(state_map.isReadOnly()) + with TestAreaContext("python/state-map/fwrite") as work_area: + state_map.save("MAP") + s2 = StateMap("MAP") + self.assertTrue( state_map == s2 ) + + def test_state_map_transitions(self): self.assertTrue(StateMap.isLegalTransition(RealizationStateEnum.STATE_UNDEFINED, RealizationStateEnum.STATE_INITIALIZED)) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_time_map.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_time_map.py new file mode 100644 index 0000000000..7b67abd156 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_time_map.py @@ -0,0 +1,146 @@ +import datetime + +from ert.enkf.enums.realization_state_enum import RealizationStateEnum +from ert.enkf import TimeMap +from ert.test import TestAreaContext +from ert.test import ExtendedTestCase + + +class TimeMapTest(ExtendedTestCase): + + def test_time_map(self): + with self.assertRaises(IOError): + TimeMap("Does/not/exist") + + + tm = TimeMap() + with self.assertRaises(IndexError): + t = tm[10] + + self.assertTrue( tm.update(0 , datetime.date(2000 , 1, 1))) + self.assertEqual( tm[0] , datetime.date(2000 , 1, 1)) + + self.assertTrue( tm.isStrict() ) + with self.assertRaises(Exception): + tm.update(tm.update(0 , datetime.date(2000 , 1, 2))) + + tm.setStrict( False ) + self.assertFalse(tm.update(0 , datetime.date(2000 , 1, 2))) + + tm.setStrict( True ) + self.assertTrue( tm.update( 1 , datetime.date(2000 , 1, 2))) + d = tm.dump() + self.assertEqual( d , [(0 , datetime.date(2000,1,1) , 0), + (1 , datetime.date(2000,1,2) , 1)]) + + + def test_fscanf(self): + tm = TimeMap() + + with self.assertRaises(IOError): + tm.fload( "Does/not/exist" ) + + with TestAreaContext("timemap/fload1") as work_area: + with open("map.txt","w") as fileH: + fileH.write("10/10/2000\n") + fileH.write("12/10/2000\n") + fileH.write("14/10/2000\n") + fileH.write("16/10/2000\n") + + tm.fload("map.txt") + self.assertEqual( 4 , len(tm) ) + self.assertEqual( datetime.date(2000,10,10) , tm[0]) + self.assertEqual( datetime.date(2000,10,16) , tm[3]) + + with TestAreaContext("timemap/fload2") as work_area: + with open("map.txt","w") as fileH: + fileH.write("10/10/200X\n") + + with self.assertRaises(Exception): + tm.fload("map.txt") + + self.assertEqual( 4 , len(tm) ) + self.assertEqual( datetime.date(2000,10,10) , tm[0]) + self.assertEqual( datetime.date(2000,10,16) , tm[3]) + + + with TestAreaContext("timemap/fload2") as work_area: + with open("map.txt","w") as fileH: + fileH.write("12/10/2000\n") + fileH.write("10/10/2000\n") + + with self.assertRaises(Exception): + tm.fload("map.txt") + + self.assertEqual( 4 , len(tm) ) + self.assertEqual( datetime.date(2000,10,10) , tm[0]) + self.assertEqual( datetime.date(2000,10,16) , tm[3]) + + + def test_setitem(self): + tm = TimeMap() + tm[0] = datetime.date(2000,1,1) + tm[1] = datetime.date(2000,1,2) + self.assertEqual(2 , len(tm)) + + self.assertEqual( tm[0] , datetime.date(2000,1,1) ) + self.assertEqual( tm[1] , datetime.date(2000,1,2) ) + + + def test_in(self): + tm = TimeMap() + tm[0] = datetime.date(2000,1,1) + tm[1] = datetime.date(2000,1,2) + tm[2] = datetime.date(2000,1,3) + + self.assertTrue( datetime.date(2000,1,1) in tm ) + self.assertTrue( datetime.date(2000,1,2) in tm ) + self.assertTrue( datetime.date(2000,1,3) in tm ) + + self.assertFalse( datetime.date(2001,1,3) in tm ) + self.assertFalse( datetime.date(1999,1,3) in tm ) + + + def test_lookupDate(self): + tm = TimeMap() + tm[0] = datetime.date(2000,1,1) + tm[1] = datetime.date(2000,1,2) + tm[2] = datetime.date(2000,1,3) + + self.assertEqual( 0 , tm.lookupTime( datetime.date(2000,1,1))) + self.assertEqual( 0 , tm.lookupTime( datetime.datetime(2000,1,1,0,0,0))) + + self.assertEqual( 2 , tm.lookupTime( datetime.date(2000,1,3))) + self.assertEqual( 2 , tm.lookupTime( datetime.datetime(2000,1,3,0,0,0))) + + with self.assertRaises(ValueError): + tm.lookupTime( datetime.date(1999,10,10)) + + + def test_lookupDays(self): + tm = TimeMap() + + with self.assertRaises(ValueError): + tm.lookupDays( 0 ) + + tm[0] = datetime.date(2000,1,1) + tm[1] = datetime.date(2000,1,2) + tm[2] = datetime.date(2000,1,3) + + self.assertEqual( 0 , tm.lookupDays( 0 )) + self.assertEqual( 1 , tm.lookupDays( 1 )) + self.assertEqual( 2 , tm.lookupDays( 2 )) + + with self.assertRaises(ValueError): + tm.lookupDays( -1 ) + + with self.assertRaises(ValueError): + tm.lookupDays( 0.50 ) + + with self.assertRaises(ValueError): + tm.lookupDays( 3 ) + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_convex_hull.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_convex_hull.py new file mode 100644 index 0000000000..395fbe5fec --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_convex_hull.py @@ -0,0 +1,27 @@ +from ert.geo.geometry_tools import GeometryTools +from ert.test.extended_testcase import ExtendedTestCase + + +class ConvexHullTest(ExtendedTestCase): + + def test_ccw(self): + p1 = (0, 0) + p2 = (1, 0) + p3 = (0, 1) + p4 = (0, 2) + + + self.assertTrue(GeometryTools.ccw(p1, p2, p3) > 0) # Counter-clockwise + self.assertTrue(GeometryTools.ccw(p1, p3, p2) < 0) # Clockwise + self.assertTrue(GeometryTools.ccw(p1, p3, p4) == 0) # Colinear + + + def test_convex_hull(self): + points = [(0, 0), (0, 1), (1, 1), (1, 0), (1, 1), (0.5, 0.5), (0.25, 0.25), (0.5, 1.25), (0.5, 0.75)] + result = GeometryTools.convexHull(points) + self.assertEqual(result, [(0, 0), (0, 1), (0.5, 1.25), (1, 1), (1, 0)]) + + + points = [(0, -0.5), (0, 0.5), (-0.5, 0), (0.5, 0), (0, 0), (0.5, 0.5)] + result = GeometryTools.convexHull(points) + self.assertEqual(result, [(-0.5, 0), (0, 0.5), (0.5, 0.5), (0.5, 0), (0, -0.5)]) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_intersection.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_intersection.py new file mode 100644 index 0000000000..527c80667e --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_intersection.py @@ -0,0 +1,47 @@ +from ert.geo import GeometryTools +from ert.test.extended_testcase import ExtendedTestCase + + +class IntersectionTest(ExtendedTestCase): + + def test_intersection(self): + + p1 = (0.0, 0.0) + p2 = (10.0, 0.0) + p3 = (5.0, -5.0) + p4 = (5.0, 5.0) + + self.assertEqual(GeometryTools.lineIntersection(p1, p2, p3, p4), (5.0, 0.0)) + + p5 = (0.0, 5.0) + self.assertEqual(GeometryTools.lineIntersection(p1, p2, p3, p5), (2.5, 0)) + + + self.assertEqual(GeometryTools.lineIntersection((0.0, 0.0), (1.0, 1.0), (0.0, 1.0), (1.0, 0.0)), (0.5, 0.5)) + + + def test_coincident(self): + p1 = (0.0, 0.0) + p2 = (10.0, 10.0) + + self.assertEqual(GeometryTools.lineIntersection(p1, p2, p1, p2), (5.0, 5.0)) + + + def test_parallel(self): + p1 = (0.0, 0.0) + p2 = (10.0, 0.0) + + p3 = (0.0, 1.0) + p4 = (10.0, 1.0) + + self.assertIsNone(GeometryTools.lineIntersection(p1, p2, p3, p4)) + + + def test_intersection_outside_segments(self): + p1 = (0.0, 0.0) + p2 = (10.0, 0.0) + + p3 = (-1.0, -1.0) + p4 = (-1.0, 1.0) + + self.assertIsNone(GeometryTools.lineIntersection(p1, p2, p3, p4)) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_point_in_polygon.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_point_in_polygon.py new file mode 100644 index 0000000000..ad2e87c31b --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_point_in_polygon.py @@ -0,0 +1,60 @@ +from ert.geo.geometry_tools import GeometryTools +from ert.geo.polyline import Polyline +from ert.test.extended_testcase import ExtendedTestCase + + +class PointInPolygonTest(ExtendedTestCase): + + def test_point_in_polygon(self): + p1 = (0.5, 0.5) + p2 = (2, 2) + p3 = (1, 0.5) # on the edge + + poly1 = [(0, 0), (1, 0), (1, 1), (0, 1)] # Not explicitly closed + poly2 = [(0, 0), (1, 0), (1, 1), (0, 1), (0, 0)] # explicitly closed + + self.assertTrue(GeometryTools.pointInPolygon(p1, poly1)) + self.assertTrue(GeometryTools.pointInPolygon(p1, poly2)) + + self.assertFalse(GeometryTools.pointInPolygon(p2, poly1)) + self.assertFalse(GeometryTools.pointInPolygon(p2, poly2)) + + self.assertTrue(GeometryTools.pointInPolygon(p3, poly1)) + + + def test_point_in_polyline(self): + p1 = (0.5, 0.5) + p2 = (2, 2) + + poly = Polyline() + poly.addPoint(0, 0) + poly.addPoint(1, 0) + poly.addPoint(1, 1) + poly.addPoint(0, 1) + poly.addPoint(0, 0) + + self.assertTrue(GeometryTools.pointInPolygon(p1, poly)) + self.assertTrue(GeometryTools.pointInPolygon(p1, poly)) + + self.assertFalse(GeometryTools.pointInPolygon(p2, poly)) + self.assertFalse(GeometryTools.pointInPolygon(p2, poly)) + + + def test_point_in_strange_polygon(self): + p1 = (0.5, 0.51) + p2 = (0.5, 0.49) + + poly = [(0,0), (0, 1), (0.6, 0.5), (0.4, 0.5), (1, 1), (1, 0)] + + self.assertFalse(GeometryTools.pointInPolygon(p1, poly)) + self.assertTrue(GeometryTools.pointInPolygon(p2, poly)) + + + def test_point_in_polygon_with_3_element_points(self): + p1 = (0.5, 0.51, 0.2) + p2 = (0.5, 0.49, 0.1) + + poly = [(0,0,9), (0,1,9), (0.6,0.5), (0.4,0.5,9), (1,1), (1,0,9)] + + self.assertFalse(GeometryTools.pointInPolygon(p1, poly)) + self.assertTrue(GeometryTools.pointInPolygon(p2, poly)) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polygon_slicing.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polygon_slicing.py new file mode 100644 index 0000000000..9ea39d22f0 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polygon_slicing.py @@ -0,0 +1,113 @@ +from math import sqrt +from ert.geo.geometry_tools import GeometryTools +from ert.test import ExtendedTestCase + + +class PolygonSlicingTest(ExtendedTestCase): + + def test_line_to_ray(self): + p0 = (0.0, 0.0) + p1 = (1.0, 1.0) + p2 = (1.0, 0.0) + + ray = GeometryTools.lineToRay(p0, p1) + self.assertEqual(ray, (1.0 / sqrt(2.0), 1.0 / sqrt(2.0))) + + ray = GeometryTools.lineToRay(p1, p0) + self.assertEqual(ray, (-1.0 / sqrt(2.0), -1.0 / sqrt(2.0))) + + ray = GeometryTools.lineToRay(p0, p2) + self.assertEqual(ray, (1.0, 0.0)) + + + def test_ray_line_intersection(self): + p0 = (0.0, 0.0) + p1 = (0.0, 1.0) + p2 = (1.0, 1.0) + p3 = (1.0, 0.0) + p5 = (2.0, 1.0) + + ray1 = GeometryTools.lineToRay(p0, p2) + ray2 = GeometryTools.lineToRay(p2, p0) + ray3 = GeometryTools.lineToRay(p0, p5) + + self.assertEqual((0.5, 0.5), GeometryTools.rayLineIntersection(p0, ray1, p1, p3)) + self.assertIsNone(GeometryTools.rayLineIntersection(p0, ray2, p1, p3)) #ray2 is ray1 reversed (no backwards intersections) + + self.assertEqual((1.0, 0.5), GeometryTools.rayLineIntersection(p0, ray3, p2, p3)) + self.assertIsNone(GeometryTools.rayLineIntersection(p0, ray3, p1, p2)) + + + + def test_slicing_short_line_segment(self): + p0 = (0.0, 0.0) + p1 = (0.0, 1.0) + p2 = (1.0, 1.0) + p3 = (1.0, 0.0) + polygon = [p0, p1, p2, p3, p0] + lp0 = (0.2, 0.5) + lp1 = (0.4, 0.5) + line = [lp0, lp1] + + result = GeometryTools.slicePolygon(polygon, line) + + expected = [(0.0, 0.5), p1, p2, (1.0, 0.5), lp1, lp0, (0.0, 0.5)] + + self.assertEqual(result, expected) + + + def test_slicing_bendy_line_segments(self): + p0 = (0.0, 0.0) + p1 = (0.0, 1.0) + p2 = (1.0, 1.0) + p3 = (1.0, 0.0) + polygon = [p0, p1, p2, p3, p0] + + lp0 = (0.2, 0.5) + lp1 = (0.4, 0.5) + lp2 = (0.4, 0.3) + line = [lp0, lp1, lp2] + + expected = [(0.0, 0.5), p1, p2, p3, (0.4, 0.0), lp2, lp1, lp0, (0.0, 0.5)] + + result = GeometryTools.slicePolygon(polygon, line) + self.assertEqual(result, expected) + + line = [lp2, lp1, lp0] + result = GeometryTools.slicePolygon(polygon, line) + self.assertEqual(result, expected) + + + def test_slicing_same_segment(self): + p0 = (0.0, 0.0) + p1 = (0.0, 1.0) + p2 = (1.0, 1.0) + p3 = (1.0, 0.0) + polygon = [p0, p1, p2, p3, p0] + + lp0 = (0.2, 0.5) + lp1 = (0.4, 0.5) + lp2 = (0.4, 0.3) + lp3 = (0.2, 0.3) + + line = [lp0, lp1, lp2, lp3] + result = GeometryTools.slicePolygon(polygon, line) + expected = [(0.0, 0.5), (0.0, 0.3), lp3, lp2, lp1, lp0, (0.0, 0.5)] + self.assertEqual(result, expected) + + line = [lp3, lp2, lp1, lp0] + result = GeometryTools.slicePolygon(polygon, line) + expected = [(0.0, 0.3), (0.0, 0.5), lp0, lp1, lp2, lp3, (0.0, 0.3)] + self.assertEqual(result, expected) + + + def test_ray_polyline_intersections(self): + p0 = (0.5, 0.0) + ray = (0.0, 1.0) + + polygon = [(0.0, 0.0), (0.0, 1.0), (1.0, 1.0), (1.0, 2.0), (-1.0, 2.0)] + + intersections = GeometryTools.rayPolygonIntersections(p0, ray, polygon) + + self.assertEqual(intersections, [(1, (0.5, 1.0)), (3, (0.5, 2.0))]) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polyline.py b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polyline.py new file mode 100644 index 0000000000..864c42b24f --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/geometry/test_polyline.py @@ -0,0 +1,154 @@ + +from ert.geo import Polyline, GeometryTools +from ert.geo.xyz_io import XYZIo +from ert.test import ExtendedTestCase , TestAreaContext + + +class PolylineTest(ExtendedTestCase): + def setUp(self): + self.polyline = self.createTestPath("local/geometry/pol11.xyz") + self.closed_polyline = self.createTestPath("local/geometry/pol8.xyz") + + def test_construction(self): + polyline = Polyline(name="test line") + + with self.assertRaises(IndexError): + polyline.isClosed() + + self.assertEqual(polyline.name(), "test line") + + self.assertEqual(len(polyline), 0) + + polyline.addPoint(0, 0, 0) + self.assertEqual(len(polyline), 1) + + polyline.addPoint(1, 1, 0) + self.assertEqual(len(polyline), 2) + + polyline.addPoint(1, 1.5) + self.assertEqual(len(polyline), 3) + + self.assertEqual(polyline[0], (0, 0, 0)) + self.assertEqual(polyline[1], (1, 1, 0)) + self.assertEqual(polyline[2], (1, 1.5)) + + polyline.addPoint(0, 1, 0) + self.assertFalse(polyline.isClosed()) + + polyline.addPoint(0, 0, 0) + self.assertTrue(polyline.isClosed()) + + + + def test_construction_default(self): + with self.assertRaises(TypeError): + pl = Polyline( init_points = 1 ) + + with self.assertRaises(TypeError): + pl = Polyline( init_points = [1.23] ) + + pl = Polyline( init_points = [(1,0) , (1,1) , (1,2)]) + self.assertEqual( len(pl) , 3 ) + + + + + def test_iteration(self): + values = [(0, 0, 0), + (1, 0, 0), + (1, 1, 0), + (1, 1, 1)] + + polyline = Polyline(name="iteration line") + + for p in values: + polyline.addPoint(*p) + + for index, point in enumerate(polyline): + self.assertEqual(point, values[index]) + + + + def test_read_xyz_from_file(self): + with self.assertRaises(ValueError): + XYZIo.readXYZFile("does/not/exist.xyz") + + polyline = XYZIo.readXYZFile(self.polyline) + + self.assertEqual(polyline.name(), "pol11.xyz") + self.assertEqual(len(polyline), 13) + self.assertFalse(polyline.isClosed()) + self.assertEqual(polyline[0], (390271.843750, 6606121.334396, 1441.942627)) # first point + self.assertEqual(polyline[12], (389789.263184, 6605784.945099, 1446.627808)) # last point + + polyline = XYZIo.readXYZFile(self.closed_polyline) + + self.assertEqual(polyline.name(), "pol8.xyz") + self.assertEqual(len(polyline), 21) + self.assertTrue(polyline.isClosed()) + self.assertEqual(polyline[0], (396202.413086, 6606091.935028, 1542.620972)) # first point + self.assertEqual(polyline[20], (396202.413086, 6606091.935028, 1542.620972)) # last point + + + def test_closed(self): + pl = Polyline( init_points = [(1,0) , (1,1) , (0,2)]) + self.assertFalse( pl.isClosed() ) + pl.addPoint( 1,0 ) + self.assertEqual( 4 , len(pl) ) + self.assertTrue( pl.isClosed() ) + + pl = Polyline( init_points = [(1,0) , (1,1) , (0,2)]) + self.assertFalse( pl.isClosed() ) + pl.assertClosed( ) + self.assertEqual( 4 , len(pl) ) + self.assertTrue( pl.isClosed() ) + + + def test_save(self): + with TestAreaContext("polyline/fwrite") as work_area: + p1 = Polyline( init_points = [(1,0) , (1,1) , (1,2)]) + p2 = Polyline( init_points = [(1,0) , (1,1) , (1,2)]) + self.assertTrue( p1 == p2 ) + + XYZIo.saveXYFile(p1 , "poly.xy") + + p2 = XYZIo.readXYFile("poly.xy") + self.assertTrue( p1 == p2 ) + + + def test_unzip(self): + p2 = Polyline( init_points = [(1,0) , (1,1) , (1,2)]) + p3 = Polyline( init_points = [(1,0,1) , (1,1,2) , (1,2,3)]) + (x,y) = p2.unzip() + self.assertEqual( x , [1,1,1]) + self.assertEqual( y , [0,1,2]) + + (x,y,z) = p3.unzip() + self.assertEqual( x , [1,1,1]) + self.assertEqual( y , [0,1,2]) + self.assertEqual( z , [1,2,3]) + + + with self.assertRaises(ValueError): + (x,y,z) = p2.unzip() + + with self.assertRaises(ValueError): + (x,y) = p3.unzip() + + + def test_intersection(self): + p1 = Polyline( init_points = [(0,0) , (1,0)]) + p2 = Polyline( init_points = [(0.5 , 0.5) , (0.5,-0.5)]) + p3 = Polyline( init_points = [(0,1) , (1,1)]) + + self.assertTrue(GeometryTools.polylinesIntersect( p1 , p2 )) + self.assertFalse( GeometryTools.polylinesIntersect( p2 , p3 )) + self.assertFalse( GeometryTools.polylinesIntersect( p1 , p3 )) + + self.assertTrue( p1.intersects(p2) ) + self.assertTrue( p2.intersects(p1) ) + + self.assertTrue( not p1.intersects(p3) ) + self.assertTrue( not p3.intersects(p1) ) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_bool_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_bool_argument.py index deb1f1c6dc..5f9cdeea62 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_bool_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_bool_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import BoolArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class BoolArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line.py index 6418646873..8961cb3268 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line.py @@ -1,7 +1,7 @@ from ert_gui.ide.keywords.data import ConfigurationLine, Keyword, Argument from ert_gui.ide.keywords.definitions import StringArgument from ert_gui.ide.keywords.definitions.keyword_definition import KeywordDefinition -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ConfigurationLineTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_builder.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_builder.py index 388819945d..bf052ea79d 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_builder.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_builder.py @@ -2,7 +2,7 @@ from ert_gui.ide.keywords.configuration_line_builder import ConfigurationLineBuilder from ert_gui.ide.keywords.definitions import ArgumentDefinition from ert_gui.ide.keywords.data.configuration_line import ConfigurationLine -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ConfigurationLineBuilderTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_definition.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_definition.py index 1c3925a183..bcccb60472 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_definition.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_definition.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import ArgumentDefinition, KeywordDefinition, ConfigurationLineDefinition, IntegerArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_parser.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_parser.py index a575f6e969..e02d154cd6 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_parser.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_configuration_line_parser.py @@ -1,6 +1,6 @@ from ert_gui.ide.keywords import ConfigurationLineParser from ert_gui.ide.keywords.data import Argument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ConfigurationLineParserTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_ert_keywords.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_ert_keywords.py index 031201a3c7..300f8fbae4 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_ert_keywords.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_ert_keywords.py @@ -1,8 +1,8 @@ -from ert_gui.ide.keywords.definitions import IntegerArgument, StringArgument, BoolArgument, PathArgument, FloatArgument +from ert_gui.ide.keywords.definitions import IntegerArgument, StringArgument, BoolArgument, PathArgument, FloatArgument , PercentArgument from ert_gui.ide.keywords import ErtKeywords from ert_gui.ide.keywords.definitions.proper_name_argument import ProperNameArgument from ert_gui.ide.keywords.definitions.proper_name_format_argument import ProperNameFormatArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ErtKeywordTest(ExtendedTestCase): @@ -29,172 +29,170 @@ def keywordTest(self, name, argument_types, documentation_link, group, required= def test_eclipse_keywords(self): - self.keywordTest("DATA_FILE", [PathArgument], "eclipse/data_file", "Eclipse", True) - self.keywordTest("EQUIL_INIT_FILE", [PathArgument], "eclipse/equil_init_file", "Eclipse") - self.keywordTest("ECLBASE", [StringArgument], "eclipse/ecl_base", "Eclipse", True) - self.keywordTest("JOBNAME", [StringArgument], "eclipse/job_name", "Eclipse", True) - self.keywordTest("GRID", [PathArgument], "eclipse/grid", "Eclipse", True) - self.keywordTest("INIT_SECTION", [PathArgument], "eclipse/init_section", "Eclipse", True) - self.keywordTest("SCHEDULE_FILE", [PathArgument], "ensemble/schedule_file", "Eclipse", True) - self.keywordTest("DATA_KW", [StringArgument, StringArgument], "ensemble/data_kw", "Eclipse") - self.keywordTest("IGNORE_SCHEDULE", [BoolArgument], "ensemble/ignore_schedule", "Eclipse") + self.keywordTest("DATA_FILE", [PathArgument], "keywords/data_file", "Eclipse", True) + self.keywordTest("EQUIL_INIT_FILE", [PathArgument], "keywords/equil_init_file", "Eclipse") + self.keywordTest("ECLBASE", [StringArgument], "keywords/eclbase", "Eclipse", True) + self.keywordTest("JOBNAME", [StringArgument], "keywords/job_name", "Eclipse", True) + self.keywordTest("GRID", [PathArgument], "keywords/grid", "Eclipse", True) + self.keywordTest("INIT_SECTION", [PathArgument], "keywords/init_section", "Eclipse", True) + self.keywordTest("SCHEDULE_FILE", [PathArgument], "keywords/schedule_file", "Eclipse", True) + self.keywordTest("DATA_KW", [StringArgument, StringArgument], "keywords/data_kw", "Eclipse") + self.keywordTest("IGNORE_SCHEDULE", [BoolArgument], "keywords/ignore_schedule", "Eclipse") def test_ensemble_keywords(self): - self.keywordTest("NUM_REALIZATIONS", [IntegerArgument], "ensemble/num_realizations", "Ensemble", True) - self.keywordTest("END_DATE", [StringArgument], "ensemble/end_date", "Ensemble") - self.keywordTest("ENSPATH", [PathArgument], "ensemble/enspath", "Ensemble") - self.keywordTest("SELECT_CASE", [StringArgument], "ensemble/select_case", "Ensemble") - self.keywordTest("HISTORY_SOURCE", [StringArgument], "ensemble/history_source", "Ensemble") - self.keywordTest("REFCASE", [PathArgument], "ensemble/refcase", "Ensemble") - self.keywordTest("REFCASE_LIST", [StringArgument], "ensemble/refcase_list", "Ensemble") - self.keywordTest("INCLUDE", [PathArgument], "ensemble/include", "Ensemble") - self.keywordTest("OBS_CONFIG", [PathArgument], "ensemble/obs_config", "Ensemble") - self.keywordTest("RESULT_PATH", [PathArgument], "ensemble/result_path", "Ensemble") - self.keywordTest("LICENSE_PATH", [PathArgument], "ensemble/license_path", "Ensemble") - self.keywordTest("LOCAL_CONFIG", [StringArgument], "ensemble/local_config", "Ensemble") + self.keywordTest("NUM_REALIZATIONS", [IntegerArgument], "keywords/num_realizations", "Ensemble", True) + self.keywordTest("END_DATE", [StringArgument], "keywords/end_date", "Ensemble") + self.keywordTest("ENSPATH", [PathArgument], "keywords/enspath", "Ensemble") + self.keywordTest("SELECT_CASE", [StringArgument], "keywords/select_case", "Ensemble") + self.keywordTest("HISTORY_SOURCE", [StringArgument], "keywords/history_source", "Ensemble") + self.keywordTest("REFCASE", [PathArgument], "keywords/refcase", "Ensemble") + self.keywordTest("REFCASE_LIST", [StringArgument], "keywords/refcase_list", "Ensemble") + self.keywordTest("INCLUDE", [PathArgument], "keywords/include", "Ensemble") + self.keywordTest("OBS_CONFIG", [PathArgument], "keywords/obs_config", "Ensemble") + self.keywordTest("RESULT_PATH", [PathArgument], "keywords/result_path", "Ensemble") + self.keywordTest("LICENSE_PATH", [PathArgument], "keywords/license_path", "Ensemble") + self.keywordTest("LOCAL_CONFIG", [StringArgument], "keywords/local_config", "Ensemble") def test_run_keywords(self): - self.keywordTest("INSTALL_JOB", [StringArgument, PathArgument], "run/install_job", "Run") - self.keywordTest("DELETE_RUNPATH", [StringArgument], "run/delete_runpath", "Run") - self.keywordTest("KEEP_RUNPATH", [StringArgument], "run/keep_runpath", "Run") - self.keywordTest("RUNPATH", [PathArgument], "run/runpath", "Run") - self.keywordTest("RERUN_PATH", [PathArgument], "run/rerun_path", "Run") - self.keywordTest("RUNPATH_FILE", [PathArgument], "run/runpath_file", "Run") - self.keywordTest("FORWARD_MODEL", [StringArgument], "run/forward_model", "Run") - self.keywordTest("JOB_SCRIPT", [PathArgument], "run/job_script", "Run") - self.keywordTest("RUN_TEMPLATE", [PathArgument, StringArgument], "run/run_template", "Run") - self.keywordTest("LOG_LEVEL", [IntegerArgument], "run/log_level", "Run") - self.keywordTest("LOG_FILE", [PathArgument], "run/log_file", "Run") - self.keywordTest("MAX_SUBMIT", [IntegerArgument], "run/max_submit", "Run") - self.keywordTest("MAX_RESAMPLE", [IntegerArgument], "run/max_resample", "Run") - self.keywordTest("PRE_CLEAR_RUNPATH", [BoolArgument], "run/pre_clear_runpath", "Run") + self.keywordTest("INSTALL_JOB", [StringArgument, PathArgument], "keywords/install_job", "Run") + self.keywordTest("DELETE_RUNPATH", [StringArgument], "keywords/delete_runpath", "Run") + self.keywordTest("KEEP_RUNPATH", [StringArgument], "keywords/keep_runpath", "Run") + self.keywordTest("RUNPATH", [PathArgument], "keywords/runpath", "Run") + self.keywordTest("RUNPATH_FILE", [PathArgument], "keywords/runpath_file", "Run") + self.keywordTest("FORWARD_MODEL", [StringArgument], "keywords/forward_model", "Run") + self.keywordTest("JOB_SCRIPT", [PathArgument], "keywords/job_script", "Run") + self.keywordTest("RUN_TEMPLATE", [PathArgument, StringArgument], "keywords/run_template", "Run") + self.keywordTest("LOG_LEVEL", [IntegerArgument], "keywords/log_level", "Run") + self.keywordTest("LOG_FILE", [PathArgument], "keywords/log_file", "Run") + self.keywordTest("MAX_SUBMIT", [IntegerArgument], "keywords/max_submit", "Run") + self.keywordTest("MAX_RESAMPLE", [IntegerArgument], "keywords/max_resample", "Run") + self.keywordTest("PRE_CLEAR_RUNPATH", [BoolArgument], "keywords/pre_clear_runpath", "Run") def test_control_simulations_keywords(self): - self.keywordTest("MAX_RUNTIME", [IntegerArgument], "control_simulations/max_runtime", "Simulation Control") - self.keywordTest("MIN_REALIZATIONS", [IntegerArgument], "control_simulations/min_realizations", "Simulation Control") - self.keywordTest("STOP_LONG_RUNNING", [BoolArgument], "control_simulations/stop_long_running", "Simulation Control") + self.keywordTest("MAX_RUNTIME", [IntegerArgument], "keywords/max_runtime", "Simulation Control") + self.keywordTest("MIN_REALIZATIONS", [IntegerArgument,PercentArgument], "keywords/min_realizations", "Simulation Control") + self.keywordTest("STOP_LONG_RUNNING", [BoolArgument], "keywords/stop_long_running", "Simulation Control") def test_parametrization_keywords(self): - self.keywordTest("FIELD", [StringArgument,StringArgument,StringArgument], "parametrization/field", "Parametrization") - self.keywordTest("GEN_DATA", [StringArgument,StringArgument,StringArgument], "parametrization/gen_data", "Parametrization") - self.keywordTest("GEN_KW", [StringArgument,StringArgument,StringArgument], "parametrization/gen_kw", "Parametrization") - self.keywordTest("GEN_KW_TAG_FORMAT", [StringArgument], "parametrization/gen_kw_tag_format", "Parametrization") - self.keywordTest("GEN_PARAM", [StringArgument,StringArgument,StringArgument], "parametrization/gen_param", "Parametrization") - self.keywordTest("SUMMARY", [StringArgument], "parametrization/summary", "Parametrization") - self.keywordTest("DBASE_TYPE", [StringArgument], "parametrization/dbase_type", "Parametrization") - self.keywordTest("STORE_SEED", [StringArgument], "parametrization/store_seed", "Parametrization") - self.keywordTest("LOAD_SEED", [StringArgument], "parametrization/load_seed", "Parametrization") - self.keywordTest("SURFACE", [StringArgument], "parametrization/surface", "Parametrization") + self.keywordTest("FIELD", [StringArgument,StringArgument,StringArgument], "keywords/field", "Parametrization") + self.keywordTest("GEN_DATA", [StringArgument,StringArgument,StringArgument], "keywords/gen_data", "Parametrization") + self.keywordTest("GEN_KW", [StringArgument,StringArgument,StringArgument], "keywords/gen_kw", "Parametrization") + self.keywordTest("GEN_KW_TAG_FORMAT", [StringArgument], "keywords/gen_kw_tag_format", "Parametrization") + self.keywordTest("GEN_PARAM", [StringArgument,StringArgument,StringArgument], "keywords/gen_param", "Parametrization") + self.keywordTest("SUMMARY", [StringArgument], "keywords/summary", "Parametrization") + self.keywordTest("DBASE_TYPE", [StringArgument], "keywords/dbase_type", "Parametrization") + self.keywordTest("STORE_SEED", [StringArgument], "keywords/store_seed", "Parametrization") + self.keywordTest("LOAD_SEED", [StringArgument], "keywords/load_seed", "Parametrization") + self.keywordTest("SURFACE", [StringArgument], "keywords/surface", "Parametrization") def test_enkf_control_keywords(self): - self.keywordTest("ENKF_ALPHA", [FloatArgument], "enkf_control/enkf_alpha", "Enkf Control") - self.keywordTest("ENKF_BOOTSTRAP", [BoolArgument], "enkf_control/enkf_bootstrap", "Enkf Control") - self.keywordTest("ENKF_CV_FOLDS", [IntegerArgument], "enkf_control/enkf_cv_folds", "Enkf Control") - self.keywordTest("ENKF_FORCE_NCOMP", [BoolArgument], "enkf_control/enkf_force_ncomp", "Enkf Control") - self.keywordTest("ENKF_LOCAL_CV", [BoolArgument], "enkf_control/enkf_local_cv", "Enkf Control") - self.keywordTest("ENKF_PEN_PRESS", [BoolArgument], "enkf_control/enkf_pen_press", "Enkf Control") - self.keywordTest("ENKF_MODE", [StringArgument], "enkf_control/enkf_mode", "Enkf Control") - self.keywordTest("ENKF_MERGE_OBSERVATIONS", [BoolArgument], "enkf_control/enkf_merge_observations", "Enkf Control") - self.keywordTest("ENKF_NCOMP", [IntegerArgument], "enkf_control/enkf_ncomp", "Enkf Control") - self.keywordTest("ENKF_RERUN", [BoolArgument], "enkf_control/enkf_rerun", "Enkf Control") - self.keywordTest("RERUN_START", [IntegerArgument], "enkf_control/rerun_start", "Enkf Control") - self.keywordTest("ENKF_SCALING", [BoolArgument], "enkf_control/enkf_scaling", "Enkf Control") - self.keywordTest("ENKF_TRUNCATION", [FloatArgument], "enkf_control/enkf_truncation", "Enkf Control") - self.keywordTest("UPDATE_LOG_PATH", [PathArgument], "enkf_control/update_log_path", "Enkf Control") - self.keywordTest("UPDATE_RESULTS", [BoolArgument], "enkf_control/update_results", "Enkf Control") - self.keywordTest("ENKF_CROSS_VALIDATION", [StringArgument], "enkf_control/enkf_cross_validation", "Enkf Control") - self.keywordTest("ENKF_KERNEL_REGRESSION", [StringArgument], "enkf_control/enkf_kernel_regression", "Enkf Control") - self.keywordTest("ENKF_KERNEL_FUNCTION", [StringArgument], "enkf_control/enkf_kernel_function", "Enkf Control") - self.keywordTest("ENKF_KERNEL_PARAM", [StringArgument], "enkf_control/enkf_kernel_param", "Enkf Control") - self.keywordTest("ENKF_SCHED_FILE", [PathArgument], "enkf_control/enkf_sched_file", "Enkf Control") - self.keywordTest("CASE_TABLE", [StringArgument], "enkf_control/case_table", "Enkf Control") - self.keywordTest("CONTAINER", [StringArgument], "enkf_control/container", "Enkf Control") + self.keywordTest("ENKF_ALPHA", [FloatArgument], "keywords/enkf_alpha", "Enkf Control") + self.keywordTest("ENKF_BOOTSTRAP", [BoolArgument], "keywords/enkf_bootstrap", "Enkf Control") + self.keywordTest("ENKF_CV_FOLDS", [IntegerArgument], "keywords/enkf_cv_folds", "Enkf Control") + self.keywordTest("ENKF_FORCE_NCOMP", [BoolArgument], "keywords/enkf_force_ncomp", "Enkf Control") + self.keywordTest("ENKF_LOCAL_CV", [BoolArgument], "keywords/enkf_local_cv", "Enkf Control") + self.keywordTest("ENKF_PEN_PRESS", [BoolArgument], "keywords/enkf_pen_press", "Enkf Control") + self.keywordTest("ENKF_MODE", [StringArgument], "keywords/enkf_mode", "Enkf Control") + self.keywordTest("ENKF_MERGE_OBSERVATIONS", [BoolArgument], "keywords/enkf_merge_observations", "Enkf Control") + self.keywordTest("ENKF_NCOMP", [IntegerArgument], "keywords/enkf_ncomp", "Enkf Control") + self.keywordTest("ENKF_RERUN", [BoolArgument], "keywords/enkf_rerun", "Enkf Control") + self.keywordTest("RERUN_START", [IntegerArgument], "keywords/rerun_start", "Enkf Control") + self.keywordTest("ENKF_SCALING", [BoolArgument], "keywords/enkf_scaling", "Enkf Control") + self.keywordTest("ENKF_TRUNCATION", [FloatArgument], "keywords/enkf_truncation", "Enkf Control") + self.keywordTest("UPDATE_LOG_PATH", [PathArgument], "keywords/update_log_path", "Enkf Control") + self.keywordTest("UPDATE_RESULTS", [BoolArgument], "keywords/update_results", "Enkf Control") + self.keywordTest("ENKF_CROSS_VALIDATION", [StringArgument], "keywords/enkf_cross_validation", "Enkf Control") + self.keywordTest("ENKF_KERNEL_REGRESSION", [StringArgument], "keywords/enkf_kernel_regression", "Enkf Control") + self.keywordTest("ENKF_KERNEL_FUNCTION", [StringArgument], "keywords/enkf_kernel_function", "Enkf Control") + self.keywordTest("ENKF_KERNEL_PARAM", [StringArgument], "keywords/enkf_kernel_param", "Enkf Control") + self.keywordTest("ENKF_SCHED_FILE", [PathArgument], "keywords/enkf_sched_file", "Enkf Control") + self.keywordTest("CASE_TABLE", [StringArgument], "keywords/case_table", "Enkf Control") + self.keywordTest("CONTAINER", [StringArgument], "keywords/container", "Enkf Control") def test_analysis_module_keywords(self): - self.keywordTest("ANALYSIS_LOAD", [StringArgument,StringArgument], "analysis_module/analysis_load", "Analysis Module") - self.keywordTest("ANALYSIS_SELECT", [StringArgument], "analysis_module/analysis_select", "Analysis Module") - self.keywordTest("ANALYSIS_SET_VAR", [StringArgument, StringArgument, StringArgument], "analysis_module/analysis_set_var", "Analysis Module") - self.keywordTest("ANALYSIS_COPY", [StringArgument, StringArgument], "analysis_module/analysis_copy", "Analysis Module") - self.keywordTest("ITER_RUNPATH", [PathArgument], "analysis_module/iter_runpath", "Analysis Module") - self.keywordTest("ITER_CASE", [ProperNameFormatArgument], "analysis_module/iter_case", "Analysis Module") - self.keywordTest("ITER_COUNT", [IntegerArgument], "analysis_module/iter_count", "Analysis Module") - self.keywordTest("STD_CUTOFF", [FloatArgument], "analysis_module/std_cutoff", "Analysis Module") - self.keywordTest("SINGLE_NODE_UPDATE", [BoolArgument], "analysis_module/single_node_update", "Analysis Module") + self.keywordTest("ANALYSIS_LOAD", [StringArgument,StringArgument], "keywords/analysis_load", "Analysis Module") + self.keywordTest("ANALYSIS_SELECT", [StringArgument], "keywords/analysis_select", "Analysis Module") + self.keywordTest("ANALYSIS_SET_VAR", [StringArgument, StringArgument, StringArgument], "keywords/analysis_set_var", "Analysis Module") + self.keywordTest("ANALYSIS_COPY", [StringArgument, StringArgument], "keywords/analysis_copy", "Analysis Module") + self.keywordTest("ITER_CASE", [ProperNameFormatArgument], "keywords/iter_case", "Analysis Module") + self.keywordTest("ITER_COUNT", [IntegerArgument], "keywords/iter_count", "Analysis Module") + self.keywordTest("STD_CUTOFF", [FloatArgument], "keywords/std_cutoff", "Analysis Module") + self.keywordTest("SINGLE_NODE_UPDATE", [BoolArgument], "keywords/single_node_update", "Analysis Module") def test_advanced_keywords(self): - self.keywordTest("ADD_FIXED_LENGTH_SCHEDULE_KW", [StringArgument, StringArgument], "advanced/add_fixed_length_schedule_kw", "Advanced") - self.keywordTest("ADD_STATIC_KW", [StringArgument, StringArgument], "advanced/add_static_kw", "Advanced") - self.keywordTest("DEFINE", [ProperNameArgument, StringArgument], "advanced/define", "Advanced") - self.keywordTest("SCHEDULE_PREDICTION_FILE", [PathArgument], "advanced/schedule_prediction_file", "Advanced") + self.keywordTest("ADD_FIXED_LENGTH_SCHEDULE_KW", [StringArgument, StringArgument], "keywords/add_fixed_length_schedule_kw", "Advanced") + self.keywordTest("ADD_STATIC_KW", [StringArgument, StringArgument], "keywords/add_static_kw", "Advanced") + self.keywordTest("DEFINE", [ProperNameArgument, StringArgument], "keywords/define", "Advanced") + self.keywordTest("SCHEDULE_PREDICTION_FILE", [PathArgument], "keywords/schedule_prediction_file", "Advanced") def test_queue_system_keywords(self): - self.keywordTest("QUEUE_SYSTEM", [StringArgument], "queue_system/queue_system", "Queue System") - self.keywordTest("QUEUE_OPTION", [StringArgument, StringArgument, StringArgument], "queue_system/queue_option", "Queue System") - self.keywordTest("LSF_SERVER", [StringArgument], "queue_system/lsf_server", "Queue System") - self.keywordTest("LSF_QUEUE", [StringArgument], "queue_system/lsf_queue", "Queue System") - self.keywordTest("LSF_RESOURCES", [StringArgument], "queue_system/lsf_resources", "Queue System") - self.keywordTest("MAX_RUNNING_LSF", [IntegerArgument], "queue_system/max_running_lsf", "Queue System") - self.keywordTest("TORQUE_QUEUE", [StringArgument], "queue_system/torque_queue", "Queue System") - self.keywordTest("MAX_RUNNING_LOCAL", [IntegerArgument], "queue_system/max_running_local", "Queue System") - self.keywordTest("RSH_HOST", [StringArgument, StringArgument], "queue_system/rsh_host", "Queue System") - self.keywordTest("RSH_COMMAND", [PathArgument], "queue_system/rsh_command", "Queue System") - self.keywordTest("MAX_RUNNING_RSH", [IntegerArgument], "queue_system/max_running_rsh", "Queue System") - self.keywordTest("HOST_TYPE", [StringArgument], "queue_system/host_type", "Queue System") + self.keywordTest("QUEUE_SYSTEM", [StringArgument], "keywords/queue_system", "Queue System") + self.keywordTest("QUEUE_OPTION", [StringArgument, StringArgument, StringArgument], "keywords/queue_option", "Queue System") + self.keywordTest("LSF_SERVER", [StringArgument], "keywords/lsf_server", "Queue System") + self.keywordTest("LSF_QUEUE", [StringArgument], "keywords/lsf_queue", "Queue System") + self.keywordTest("LSF_RESOURCES", [StringArgument], "keywords/lsf_resources", "Queue System") + self.keywordTest("MAX_RUNNING_LSF", [IntegerArgument], "keywords/max_running_lsf", "Queue System") + self.keywordTest("TORQUE_QUEUE", [StringArgument], "keywords/torque_queue", "Queue System") + self.keywordTest("MAX_RUNNING_LOCAL", [IntegerArgument], "keywords/max_running_local", "Queue System") + self.keywordTest("RSH_HOST", [StringArgument, StringArgument], "keywords/rsh_host", "Queue System") + self.keywordTest("RSH_COMMAND", [PathArgument], "keywords/rsh_command", "Queue System") + self.keywordTest("MAX_RUNNING_RSH", [IntegerArgument], "keywords/max_running_rsh", "Queue System") + self.keywordTest("HOST_TYPE", [StringArgument], "keywords/host_type", "Queue System") def test_plot_keywords(self): - self.keywordTest("IMAGE_VIEWER", [PathArgument], "plot/image_viewer", "Plot") - self.keywordTest("IMAGE_TYPE", [StringArgument], "plot/image_type", "Plot") - self.keywordTest("PLOT_DRIVER", [StringArgument], "plot/plot_driver", "Plot") - self.keywordTest("PLOT_ERRORBAR", [BoolArgument], "plot/plot_errorbar", "Plot") - self.keywordTest("PLOT_ERRORBAR_MAX", [IntegerArgument], "plot/plot_errorbar_max", "Plot") - self.keywordTest("PLOT_WIDTH", [IntegerArgument], "plot/plot_width", "Plot") - self.keywordTest("PLOT_HEIGHT", [IntegerArgument], "plot/plot_height", "Plot") - self.keywordTest("PLOT_REFCASE", [BoolArgument], "plot/plot_refcase", "Plot") - self.keywordTest("PLOT_REFCASE_LIST", [StringArgument], "plot/plot_refcase_list", "Plot") - self.keywordTest("PLOT_PATH", [PathArgument], "plot/plot_path", "Plot") - self.keywordTest("RFT_CONFIG", [PathArgument], "plot/rft_config", "Plot") - self.keywordTest("RFTPATH", [PathArgument], "plot/rftpath", "Plot") + self.keywordTest("IMAGE_VIEWER", [PathArgument], "keywords/image_viewer", "Plot") + self.keywordTest("IMAGE_TYPE", [StringArgument], "keywords/image_type", "Plot") + self.keywordTest("PLOT_DRIVER", [StringArgument], "keywords/plot_driver", "Plot") + self.keywordTest("PLOT_ERRORBAR", [BoolArgument], "keywords/plot_errorbar", "Plot") + self.keywordTest("PLOT_ERRORBAR_MAX", [IntegerArgument], "keywords/plot_errorbar_max", "Plot") + self.keywordTest("PLOT_WIDTH", [IntegerArgument], "keywords/plot_width", "Plot") + self.keywordTest("PLOT_HEIGHT", [IntegerArgument], "keywords/plot_height", "Plot") + self.keywordTest("PLOT_REFCASE", [BoolArgument], "keywords/plot_refcase", "Plot") + self.keywordTest("PLOT_REFCASE_LIST", [StringArgument], "keywords/plot_refcase_list", "Plot") + self.keywordTest("PLOT_PATH", [PathArgument], "keywords/plot_path", "Plot") + self.keywordTest("RFT_CONFIG", [PathArgument], "keywords/rft_config", "Plot") + self.keywordTest("RFTPATH", [PathArgument], "keywords/rftpath", "Plot") def test_workflow_keywords(self): - self.keywordTest("INTERNAL", [BoolArgument], "workflow_jobs/internal", "Workflow Jobs") - self.keywordTest("FUNCTION", [StringArgument], "workflow_jobs/function", "Workflow Jobs") - self.keywordTest("MODULE", [PathArgument], "workflow_jobs/module", "Workflow Jobs") - self.keywordTest("EXECUTABLE", [PathArgument], "workflow_jobs/executable", "Workflow Jobs") - self.keywordTest("MIN_ARG", [IntegerArgument], "workflow_jobs/min_arg", "Workflow Jobs") - self.keywordTest("MAX_ARG", [IntegerArgument], "workflow_jobs/max_arg", "Workflow Jobs") - self.keywordTest("ARG_TYPE", [StringArgument], "workflow_jobs/arg_type", "Workflow Jobs") - self.keywordTest("LOAD_WORKFLOW_JOB", [StringArgument], "workflow_jobs/load_workflow_job", "Workflow Jobs") - self.keywordTest("WORKFLOW_JOB_DIRECTORY", [PathArgument], "workflow_jobs/workflow_job_directory", "Workflow Jobs") - self.keywordTest("LOAD_WORKFLOW", [PathArgument], "workflow_jobs/load_workflow", "Workflow Jobs") + self.keywordTest("INTERNAL", [BoolArgument], "keywords/internal", "Workflow Jobs") + self.keywordTest("FUNCTION", [StringArgument], "keywords/function", "Workflow Jobs") + self.keywordTest("MODULE", [PathArgument], "keywords/module", "Workflow Jobs") + self.keywordTest("EXECUTABLE", [PathArgument], "keywords/executable", "Workflow Jobs") + self.keywordTest("MIN_ARG", [IntegerArgument], "keywords/min_arg", "Workflow Jobs") + self.keywordTest("MAX_ARG", [IntegerArgument], "keywords/max_arg", "Workflow Jobs") + self.keywordTest("ARG_TYPE", [StringArgument], "keywords/arg_type", "Workflow Jobs") + self.keywordTest("LOAD_WORKFLOW_JOB", [StringArgument], "keywords/load_workflow_job", "Workflow Jobs") + self.keywordTest("WORKFLOW_JOB_DIRECTORY", [PathArgument], "keywords/workflow_job_directory", "Workflow Jobs") + self.keywordTest("LOAD_WORKFLOW", [PathArgument, StringArgument], "keywords/load_workflow", "Workflow Jobs") def test_qc_keywords(self): - self.keywordTest("QC_WORKFLOW", [StringArgument], "qc/qc_workflow", "Quality Check") - self.keywordTest("QC_PATH", [PathArgument], "qc/qc_path", "Quality Check") + self.keywordTest("QC_WORKFLOW", [StringArgument], "keywords/qc_workflow", "Quality Check") + self.keywordTest("QC_PATH", [PathArgument], "keywords/qc_path", "Quality Check") def test_report_keywords(self): - self.keywordTest("REPORT_CONTEXT", [StringArgument, StringArgument], "report/report_context", "Report") - self.keywordTest("REPORT_LIST", [StringArgument], "report/report_list", "Report") - self.keywordTest("REPORT_PATH", [PathArgument], "report/report_path", "Report") - self.keywordTest("REPORT_SEARCH_PATH", [StringArgument], "report/report_search_path", "Report") - self.keywordTest("REPORT_WELL_LIST", [StringArgument, StringArgument], "report/report_well_list", "Report") - self.keywordTest("REPORT_GROUP_LIST", [StringArgument, StringArgument], "report/report_group_list", "Report") - self.keywordTest("REPORT_TIMEOUT", [IntegerArgument], "report/report_timeout", "Report") - self.keywordTest("REPORT_LARGE", [BoolArgument], "report/report_large", "Report") + self.keywordTest("REPORT_CONTEXT", [StringArgument, StringArgument], "keywords/report_context", "Report") + self.keywordTest("REPORT_LIST", [StringArgument], "keywords/report_list", "Report") + self.keywordTest("REPORT_PATH", [PathArgument], "keywords/report_path", "Report") + self.keywordTest("REPORT_SEARCH_PATH", [StringArgument], "keywords/report_search_path", "Report") + self.keywordTest("REPORT_WELL_LIST", [StringArgument, StringArgument], "keywords/report_well_list", "Report") + self.keywordTest("REPORT_GROUP_LIST", [StringArgument, StringArgument], "keywords/report_group_list", "Report") + self.keywordTest("REPORT_TIMEOUT", [IntegerArgument], "keywords/report_timeout", "Report") + self.keywordTest("REPORT_LARGE", [BoolArgument], "keywords/report_large", "Report") def test_unix_environment_keywords(self): - self.keywordTest("SETENV", [StringArgument, StringArgument], "unix_environment/setenv", "Unix") - self.keywordTest("UMASK", [IntegerArgument], "unix_environment/umask", "Unix") - self.keywordTest("UPDATE_PATH", [StringArgument,PathArgument], "unix_environment/update_path", "Unix") + self.keywordTest("SETENV", [StringArgument, StringArgument], "keywords/setenv", "Unix") + self.keywordTest("UMASK", [IntegerArgument], "keywords/umask", "Unix") + self.keywordTest("UPDATE_PATH", [StringArgument,PathArgument], "keywords/update_path", "Unix") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_float_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_float_argument.py index d81777f351..376ea3e87d 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_float_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_float_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import FloatArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class FloatArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_integer_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_integer_argument.py index 7f218eb824..e40597416c 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_integer_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_integer_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import IntegerArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class IntegerArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_path_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_path_argument.py index 4815ddcfb4..1bac902d4e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_path_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_path_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import PathArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class PathArgumentTest(ExtendedTestCase): @@ -12,4 +12,4 @@ def test_path_argument(self): self.assertFalse(validation_status) validation_status = path_arg.validate(__file__) - self.assertTrue(validation_status) \ No newline at end of file + self.assertTrue(validation_status) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_percent_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_percent_argument.py new file mode 100644 index 0000000000..d7afffc7c0 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_percent_argument.py @@ -0,0 +1,99 @@ +from ert_gui.ide.keywords.definitions import PercentArgument +from ert.test import ExtendedTestCase + + +class PercentArgumentTest(ExtendedTestCase): + + def test_default_percent_argument(self): + percent = PercentArgument() + + validation_status = percent.validate("45%") + + self.assertTrue(validation_status) + self.assertEqual(validation_status.value(), 0.45) + self.assertEqual(validation_status.message(), "") + + + validation_status = percent.validate("-45%") + + self.assertTrue(validation_status) + self.assertEqual(validation_status.value(), -0.45) + + + validation_status = percent.validate("45") + + self.assertFalse(validation_status) + self.assertNotEqual(validation_status.message(), "") + self.assertIsNone(validation_status.value()) + + validation_status = percent.validate("gx") + + self.assertFalse(validation_status) + self.assertNotEqual(validation_status.message(), "") + + + def test_percent_range_argument_from(self): + from_value = 99 + percent = PercentArgument(from_value=from_value) + + validation_status = percent.validate("%d%%" % from_value) + self.assertTrue(validation_status) + + value = 98 + validation_status = percent.validate("%d%%" % value) + self.assertFalse(validation_status) + + range_string = "%g %% <= %g %%" % (from_value, value) + self.assertEqual(validation_status.message(), PercentArgument.NOT_IN_RANGE % range_string) + + + def test_percent_range_argument_to(self): + to_value = 99 + percent = PercentArgument(to_value=to_value) + + validation_status = percent.validate("%d%%" % to_value) + self.assertTrue(validation_status) + + value = 100 + validation_status = percent.validate("%d%%" % value) + self.assertFalse(validation_status) + + range_string = "%g%% <= %g%%" % (value, to_value) + self.assertEqual(validation_status.message(), PercentArgument.NOT_IN_RANGE % range_string) + + + def test_percent_range_argument(self): + from_value = 10 + to_value = 20 + percent = PercentArgument(from_value=from_value, to_value=to_value) + + validation_status = percent.validate("%d%%" % to_value) + self.assertTrue(validation_status) + + validation_status = percent.validate("%d%%" % from_value) + self.assertTrue(validation_status) + + validation_status = percent.validate("%d%%" % 15) + self.assertTrue(validation_status) + + value = 9 + validation_status = percent.validate("%d%%" % value) + self.assertFalse(validation_status) + + range_string = "%g%% <= %g%% <= %g%%" % (from_value, value, to_value) + self.assertEqual(validation_status.message(), PercentArgument.NOT_IN_RANGE % range_string) + + value = 21 + validation_status = percent.validate("%d%%" % value) + self.assertFalse(validation_status) + + range_string = "%g%% <= %g%% <= %g%%" % (from_value, value, to_value) + self.assertEqual(validation_status.message(), PercentArgument.NOT_IN_RANGE % range_string) + + + + + + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_argument.py index 64d2f2fbf4..1d754feef1 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import ProperNameArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ProperNameArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_argument.py index 4a83188b31..f6f1ccb180 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions import ProperNameFormatArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class ProperNameFormatArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_string_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_string_argument.py new file mode 100644 index 0000000000..8fa3ecd2ef --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_proper_name_format_string_argument.py @@ -0,0 +1,21 @@ +from ert_gui.ide.keywords.definitions import ProperNameFormatStringArgument +from ert.test import ExtendedTestCase + + +class ProperNameFormatStringArgumentTest(ExtendedTestCase): + + def test_proper_name_format_string_argument(self): + + argument = ProperNameFormatStringArgument() + + self.assertTrue(argument.validate("NAME%s")) + self.assertTrue(argument.validate("__NA%sME__")) + self.assertTrue(argument.validate("%s")) + self.assertTrue(argument.validate("%s-NAME-")) + self.assertTrue(argument.validate("%s")) + self.assertTrue(argument.validate(".NA.ME%s.")) + + self.assertFalse(argument.validate("-%sNA ME-")) + self.assertFalse(argument.validate("NAME*%s")) + self.assertFalse(argument.validate("")) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_range_string_argument.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_range_string_argument.py index 2a0a522c2c..a3612cec84 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_range_string_argument.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_range_string_argument.py @@ -1,5 +1,5 @@ from ert_gui.ide.keywords.definitions.range_string_argument import RangeStringArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class RangeStringArgumentTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_tokens.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_tokens.py index 5db1e27c4f..60285f0dc5 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_tokens.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/test_tokens.py @@ -1,6 +1,6 @@ from ert_gui.ide.keywords.data import Keyword, Argument, Token from ert_gui.ide.keywords.definitions import KeywordDefinition, StringArgument -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class TokenTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/wizards/test_tree_structure.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/wizards/test_tree_structure.py index b74059a3d3..402a7346fd 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/wizards/test_tree_structure.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/ide/wizards/test_tree_structure.py @@ -1,6 +1,6 @@ from PyQt4.QtCore import Qt from ert_gui.ide.wizards import TreeItem, TreeModel -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class TreeStructureTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/__init__.py new file mode 100644 index 0000000000..284bf2e772 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/__init__.py @@ -0,0 +1 @@ +__author__ = 'jpb' diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/test_plot_metrics_tracker.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/test_plot_metrics_tracker.py new file mode 100644 index 0000000000..845dbb5d64 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/plot/test_plot_metrics_tracker.py @@ -0,0 +1,60 @@ +from ert.test.extended_testcase import ExtendedTestCase +from ert_gui.tools.plot.plot_metrics_tracker import PlotMetricsTracker + + +class PlotMetricTrackerTest(ExtendedTestCase): + + def test_creation(self): + pmt = PlotMetricsTracker() + + self.assertIsNone(pmt.getType(None)) + + with self.assertRaises(KeyError): + pmt.getType("type") + + + self.assertIsNone(pmt.getDataTypeKey()) + + pmt.setDataTypeKey("test data type") + self.assertEqual(pmt.getDataTypeKey(), "test data type") + + + + def test_scale_types(self): + pmt = PlotMetricsTracker() + + pmt.addScaleType("index", int) + self.assertEqual(pmt.getType("index"), int) + + pmt.addScaleType("value", float) + self.assertEqual(pmt.getType("value"), float) + + + with self.assertRaises(KeyError): + pmt.getScalesForType("index") + + + pmt.setDataTypeKey("TestData1") + self.assertEqual(pmt.getScalesForType("index"), (None, None)) + self.assertEqual(pmt.getScalesForType("value"), (None, None)) + + pmt.setDataTypeKey("TestData2") + self.assertEqual(pmt.getScalesForType("index"), (None, None)) + self.assertEqual(pmt.getScalesForType("value"), (None, None)) + + pmt.setScalesForType("index", 1, 2) + pmt.setScalesForType("value", 1.5, 2.9) + self.assertEqual(pmt.getScalesForType("index"), (1, 2)) + self.assertEqual(pmt.getScalesForType("value"), (1.5, 2.9)) + + pmt.setDataTypeKey("TestData1") + self.assertEqual(pmt.getScalesForType("index"), (None, None)) + self.assertEqual(pmt.getScalesForType("value"), (None, None)) + + pmt.setScalesForType("index", 10, 20) + pmt.setScalesForType("value", 2.5, 3.9) + self.assertEqual(pmt.getScalesForType("index"), (10, 20)) + self.assertEqual(pmt.getScalesForType("value"), (2.5, 3.9)) + + with self.assertRaises(KeyError): + pmt.setScalesForType("time", 99, 999) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_model.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_model.py index 43b04c4462..e4372b66bd 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_model.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_model.py @@ -1,6 +1,6 @@ from ert_gui.models import ErtConnector from ert_gui.models.mixins import BasicModelMixin -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class EmptyModel(ErtConnector, BasicModelMixin): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_observable.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_observable.py index 3f96b7393f..8cbb4a6956 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_observable.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_observable.py @@ -1,5 +1,5 @@ from ert_gui.models import Observable -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase def observeWithoutSelf(): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_plot_data.py b/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_plot_data.py deleted file mode 100644 index 0e968ea863..0000000000 --- a/ThirdParty/Ert/devel/python/test/ert_tests/gui/test_plot_data.py +++ /dev/null @@ -1,69 +0,0 @@ -from ert.enkf.plot import DictProperty -from ert_tests import ExtendedTestCase - - -class PlotDataTest(ExtendedTestCase): - - def test_dict_properties(self): - - class Test(dict): - x = DictProperty("x") - user_data = DictProperty("user_data") - dirty = DictProperty("dirty") - - def __init__(self): - super(Test, self).__init__() - self.x = 0.0 - self["dirty"] = True - - - - t1 = Test() - self.assertEqual(t1.x, 0.0) - with self.assertRaises(AttributeError): - user_data = t1.user_data - - self.assertTrue(t1.dirty) - - t1.user_data = None - - self.assertEqual(t1.x, t1["x"]) - self.assertEqual(t1.user_data, t1["user_data"]) - self.assertEqual(t1.dirty, t1["dirty"]) - - t2 = Test() - t2.user_data = None - self.assertEqual(t1.x, t2.x) - self.assertEqual(t1.user_data, t2.user_data) - self.assertEqual(t1.dirty, t2.dirty) - - t2.x = 0.5 - t2.user_data = "Hello!" - t2.dirty = False - - self.assertEqual(t2.x, 0.5) - self.assertEqual(t2.user_data, "Hello!") - self.assertFalse(t2.dirty) - - self.assertNotEqual(t1.user_data, t2.user_data) - - - # print(t1, t2) - - def test_dict_property_mismatch(self): - # property name and dictionary name should match - class Test(dict): - value = DictProperty("valeu") - max = DictProperty("max") - - def __init__(self): - super(Test, self).__init__() - self.value = 5 - self.max = 10 - - - t = Test() - with self.assertRaises(AttributeError): - v = t.value - - m = t.max \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_ert_script.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_ert_script.py new file mode 100644 index 0000000000..42dbe7647b --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_ert_script.py @@ -0,0 +1,71 @@ +from ert.job_queue import ErtScript +from ert.test import TestAreaContext, ExtendedTestCase +from ert_tests.job_queue.workflow_common import WorkflowCommon + + +class ReturnErtScript(ErtScript): + def run(self): + return self.ert() + +class AddScript(ErtScript): + def run(self, arg1, arg2): + return arg1 + arg2 + +class FailScript(ErtScript): + def rum(self): + pass + + +class ErtScriptTest(ExtendedTestCase): + + @staticmethod + def createScripts(): + WorkflowCommon.createErtScriptsJob() + + with open("syntax_error_script.py", "w") as f: + f.write("from ert.enkf not_legal_syntax ErtScript\n") + + with open("import_error_script.py", "w") as f: + f.write("from ert.enkf import DoesNotExist\n") + + with open("empty_script.py", "w") as f: + f.write("from ert.enkf import ErtScript\n") + + + def test_ert_script_return_ert(self): + script = ReturnErtScript("ert") + result = script.initializeAndRun([], []) + self.assertEqual(result, "ert") + + + def test_ert_script_add(self): + script = AddScript("ert") + + result = script.initializeAndRun([int, int], ["5", "4"]) + + self.assertEqual(result, 9) + + with self.assertRaises(ValueError): + result = script.initializeAndRun([int, int], ["5", "4.6"]) + + + def test_ert_script_failed_implementation(self): + with self.assertRaises(UserWarning): + script = FailScript("ert") + + + def test_ert_script_from_file(self): + with TestAreaContext("python/job_queue/ert_script") as work_area: + ErtScriptTest.createScripts() + + script_object = ErtScript.loadScriptFromFile("subtract_script.py") + + script = script_object("ert") + result = script.initializeAndRun([int, int], ["1", "2"]) + self.assertEqual(result, -1) + + + # with self.assertRaises(ErtScriptError): + self.assertIsNone(ErtScript.loadScriptFromFile("syntax_error_script.py")) + self.assertIsNone(ErtScript.loadScriptFromFile("import_error_script.py")) + self.assertIsNone(ErtScript.loadScriptFromFile("empty_script.py")) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_function_ert_script.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_function_ert_script.py new file mode 100644 index 0000000000..ce6527feed --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_function_ert_script.py @@ -0,0 +1,27 @@ +import ctypes +from ert.cwrap import clib, CWrapper +from ert.test import ExtendedTestCase, TestAreaContext +from ert_tests.job_queue.workflow_common import WorkflowCommon + +test_lib = clib.ert_load("libjob_queue") # create a local namespace +cwrapper = CWrapper(test_lib) + +alloc_config = cwrapper.prototype("c_void_p workflow_job_alloc_config()") +alloc_from_file = cwrapper.prototype("workflow_job_obj workflow_job_config_alloc(char*, c_void_p, char*)") + +class FunctionErtScriptTest(ExtendedTestCase): + + def test_compare(self): + with TestAreaContext("python/job_queue/workflow_job") as work_area: + WorkflowCommon.createInternalFunctionJob() + + config = alloc_config() + workflow_job = alloc_from_file("COMPARE", config, "compare_job") + + result = workflow_job.run(None, ["String", "string"]) + self.assertNotEqual(result, 0) + + result = workflow_job.run(None, ["String", "String"]) + # result is returned as c_void_p -> automatic conversion to None if value is 0 + self.assertIsNone(result) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_job_queue.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_job_queue.py index cc765ddbd7..6cacb1bf61 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_job_queue.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_job_queue.py @@ -1,5 +1,5 @@ from ert.job_queue import JobStatusType -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class JobQueueTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow.py new file mode 100644 index 0000000000..fa48e19445 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow.py @@ -0,0 +1,56 @@ +from ert.job_queue import Workflow, WorkflowJoblist +from ert.test import ExtendedTestCase, TestAreaContext +from ert.util import SubstitutionList +from ert_tests.job_queue.workflow_common import WorkflowCommon + + +class WorkflowTest(ExtendedTestCase): + + def test_workflow(self): + with TestAreaContext("python/job_queue/workflow") as work_area: + WorkflowCommon.createExternalDumpJob() + + joblist = WorkflowJoblist() + self.assertTrue(joblist.addJobFromFile("DUMP", "dump_job")) + + with self.assertRaises(UserWarning): + joblist.addJobFromFile("KNOCK", "knock_job") + + self.assertTrue("DUMP" in joblist) + + + workflow = Workflow("dump_workflow", joblist) + + self.assertEqual(len(workflow), 2) + + job, args = workflow[0] + self.assertEqual(job, joblist["DUMP"]) + self.assertEqual(args[0], "dump1") + self.assertEqual(args[1], "dump_text_1") + + job, args = workflow[1] + self.assertEqual(job, joblist["DUMP"]) + + + def test_workflow_run(self): + with TestAreaContext("python/job_queue/workflow") as work_area: + WorkflowCommon.createExternalDumpJob() + + joblist = WorkflowJoblist() + self.assertTrue(joblist.addJobFromFile("DUMP", "dump_job")) + self.assertTrue("DUMP" in joblist) + + workflow = Workflow("dump_workflow", joblist) + + self.assertTrue(len(workflow), 2) + + context = SubstitutionList() + context.addItem("", "text") + + self.assertTrue(workflow.run(None, verbose=True, context=context)) + + with open("dump1", "r") as f: + self.assertEqual(f.read(), "dump_text_1") + + with open("dump2", "r") as f: + self.assertEqual(f.read(), "dump_text_2") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_job.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_job.py new file mode 100644 index 0000000000..8609f7e5c3 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_job.py @@ -0,0 +1,94 @@ +from ert.cwrap import clib, CWrapper +from ert.job_queue import WorkflowJob +from ert.test import TestAreaContext, ExtendedTestCase +from ert_tests.job_queue.workflow_common import WorkflowCommon + +test_lib = clib.ert_load("libjob_queue") # create a local namespace +cwrapper = CWrapper(test_lib) + +alloc_config = cwrapper.prototype("c_void_p workflow_job_alloc_config()") +alloc_from_file = cwrapper.prototype("workflow_job_obj workflow_job_config_alloc(char*, c_void_p, char*)") + +class WorkflowJobTest(ExtendedTestCase): + + def test_workflow_job_creation(self): + workflow_job = WorkflowJob("Test") + + self.assertTrue(workflow_job.isInternal()) + self.assertEqual(workflow_job.name(), "Test") + + + def test_read_internal_function(self): + with TestAreaContext("python/job_queue/workflow_job") as work_area: + WorkflowCommon.createInternalFunctionJob() + WorkflowCommon.createErtScriptsJob() + + config = alloc_config() + workflow_job = alloc_from_file("SELECT_CASE", config, "select_case_job") + + self.assertEqual(workflow_job.name(), "SELECT_CASE") + self.assertTrue(workflow_job.isInternal()) + self.assertEqual(workflow_job.functionName(), "enkf_main_select_case_JOB") + + self.assertFalse(workflow_job.isInternalScript()) + self.assertIsNone(workflow_job.getInternalScriptPath()) + + + workflow_job = alloc_from_file("SUBTRACT", config, "subtract_script_job") + self.assertEqual(workflow_job.name(), "SUBTRACT") + self.assertTrue(workflow_job.isInternal()) + self.assertIsNone(workflow_job.functionName()) + + self.assertTrue(workflow_job.isInternalScript()) + self.assertTrue(workflow_job.getInternalScriptPath().endswith("subtract_script.py")) + + + + def test_arguments(self): + with TestAreaContext("python/job_queue/workflow_job") as work_area: + WorkflowCommon.createInternalFunctionJob() + + config = alloc_config() + job = alloc_from_file("PRINTF", config, "printf_job") + + self.assertEqual(job.minimumArgumentCount(), 4) + self.assertEqual(job.maximumArgumentCount(), 5) + self.assertEqual(job.argumentTypes(), [str, int, float, bool, str]) + + self.assertTrue(job.run(None, ["x %d %f %d %s", 1, 2.5, True])) + self.assertTrue(job.run(None, ["x %d %f %d %s", 1, 2.5, True, "y"])) + + with self.assertRaises(UserWarning): # Too few arguments + job.run(None, ["x %d %f", 1, 2.5]) + + with self.assertRaises(UserWarning): # Too many arguments + job.run(None, ["x %d %f %d %s", 1, 2.5, True, "y", "nada"]) + + + def test_run_external_job(self): + + with TestAreaContext("python/job_queue/workflow_job") as work_area: + WorkflowCommon.createExternalDumpJob() + + config = alloc_config() + job = alloc_from_file("DUMP", config, "dump_job") + + self.assertFalse(job.isInternal()) + + self.assertIsNone(job.run(None, ["test", "text"])) + + with open("test", "r") as f: + self.assertEqual(f.read(), "text") + + + def test_run_internal_script(self): + with TestAreaContext("python/job_queue/workflow_job") as work_area: + WorkflowCommon.createErtScriptsJob() + + config = alloc_config() + job = alloc_from_file("SUBTRACT", config, "subtract_script_job") + + result = job.run(None, ["1", "2"]) + + self.assertEqual(result, -1) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_joblist.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_joblist.py new file mode 100644 index 0000000000..b6aa459c31 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_joblist.py @@ -0,0 +1,42 @@ +from ert.job_queue import WorkflowJoblist, WorkflowJob +from ert.test import ExtendedTestCase, TestAreaContext +from ert_tests.job_queue.workflow_common import WorkflowCommon + + +class WorkflowJoblistTest(ExtendedTestCase): + + def test_workflow_joblist_creation(self): + joblist = WorkflowJoblist() + + job = WorkflowJob("JOB1") + + joblist.addJob(job) + + self.assertTrue(job in joblist) + self.assertTrue("JOB1" in joblist) + + job_ref = joblist["JOB1"] + + self.assertEqual(job.name(), job_ref.name()) + + + + def test_workflow_joblist_with_files(self): + with TestAreaContext("python/job_queue/workflow_joblist") as work_area: + WorkflowCommon.createErtScriptsJob() + WorkflowCommon.createExternalDumpJob() + WorkflowCommon.createInternalFunctionJob() + + joblist = WorkflowJoblist() + + joblist.addJobFromFile("DUMP_JOB", "dump_job") + joblist.addJobFromFile("SELECT_CASE_JOB", "select_case_job") + joblist.addJobFromFile("SUBTRACT_SCRIPT_JOB", "subtract_script_job") + + self.assertTrue("DUMP_JOB" in joblist) + self.assertTrue("SELECT_CASE_JOB" in joblist) + self.assertTrue("SUBTRACT_SCRIPT_JOB" in joblist) + + self.assertFalse((joblist["DUMP_JOB"]).isInternal()) + self.assertTrue((joblist["SELECT_CASE_JOB"]).isInternal()) + self.assertTrue((joblist["SUBTRACT_SCRIPT_JOB"]).isInternal()) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_runner.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_runner.py new file mode 100644 index 0000000000..67b8297a0d --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/test_workflow_runner.py @@ -0,0 +1,128 @@ +import os +import time +from ert.job_queue import WorkflowJoblist, Workflow, WorkflowRunner +from ert.test import TestAreaContext, ExtendedTestCase +from ert.util.substitution_list import SubstitutionList +from ert_tests.job_queue.workflow_common import WorkflowCommon + + +class WorkflowRunnerTest(ExtendedTestCase): + + def test_workflow_thread_cancel_ert_script(self): + with TestAreaContext("python/job_queue/workflow_runner_ert_script") as work_area: + WorkflowCommon.createWaitJob() + + joblist = WorkflowJoblist() + self.assertTrue(joblist.addJobFromFile("WAIT", "wait_job")) + self.assertTrue("WAIT" in joblist) + + workflow = Workflow("wait_workflow", joblist) + + self.assertEqual(len(workflow), 3) + + + workflow_runner = WorkflowRunner(workflow) + + self.assertFalse(workflow_runner.isRunning()) + + workflow_runner.run() + + self.assertIsNone(workflow_runner.workflowResult()) + + time.sleep(1) # wait for workflow to start + self.assertTrue(workflow_runner.isRunning()) + self.assertFileExists("wait_started_0") + + time.sleep(1) # wait for first job to finish + + workflow_runner.cancel() + time.sleep(1) # wait for cancel to take effect + self.assertFileExists("wait_finished_0") + + + self.assertFileExists("wait_started_1") + self.assertFileExists("wait_cancelled_1") + self.assertFileDoesNotExist("wait_finished_1") + + self.assertTrue(workflow_runner.isCancelled()) + + workflow_runner.wait() # wait for runner to complete + + self.assertFileDoesNotExist("wait_started_2") + self.assertFileDoesNotExist("wait_cancelled_2") + self.assertFileDoesNotExist("wait_finished_2") + + + + + def test_workflow_thread_cancel_external(self): + with TestAreaContext("python/job_queue/workflow_runner_external") as work_area: + WorkflowCommon.createWaitJob() + + joblist = WorkflowJoblist() + self.assertTrue(joblist.addJobFromFile("WAIT", "external_wait_job")) + self.assertTrue("WAIT" in joblist) + + workflow = Workflow("wait_workflow", joblist) + + self.assertEqual(len(workflow), 3) + + + workflow_runner = WorkflowRunner(workflow, ert=None, context=SubstitutionList()) + + self.assertFalse(workflow_runner.isRunning()) + + workflow_runner.run() + + time.sleep(1) # wait for workflow to start + self.assertTrue(workflow_runner.isRunning()) + self.assertFileExists("wait_started_0") + + time.sleep(1) # wait for first job to finish + + workflow_runner.cancel() + time.sleep(1) # wait for cancel to take effect + self.assertFileExists("wait_finished_0") + + self.assertFileExists("wait_started_1") + self.assertFileDoesNotExist("wait_finished_1") + + self.assertTrue(workflow_runner.isCancelled()) + + workflow_runner.wait() # wait for runner to complete + + self.assertFileDoesNotExist("wait_started_2") + self.assertFileDoesNotExist("wait_cancelled_2") + self.assertFileDoesNotExist("wait_finished_2") + + + def test_workflow_success(self): + with TestAreaContext("python/job_queue/workflow_runner_fast") as work_area: + WorkflowCommon.createWaitJob() + + joblist = WorkflowJoblist() + self.assertTrue(joblist.addJobFromFile("WAIT", "wait_job")) + self.assertTrue(joblist.addJobFromFile("EXTERNAL_WAIT", "external_wait_job")) + + workflow = Workflow("fast_wait_workflow", joblist) + + self.assertEqual(len(workflow), 2) + + + workflow_runner = WorkflowRunner(workflow, ert=None, context=SubstitutionList()) + + self.assertFalse(workflow_runner.isRunning()) + + workflow_runner.run() + time.sleep(1) # wait for workflow to start + workflow_runner.wait() + + self.assertFileExists("wait_started_0") + self.assertFileDoesNotExist("wait_cancelled_0") + self.assertFileExists("wait_finished_0") + + self.assertFileExists("wait_started_1") + self.assertFileDoesNotExist("wait_cancelled_1") + self.assertFileExists("wait_finished_1") + + self.assertTrue(workflow_runner.workflowResult()) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/workflow_common.py b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/workflow_common.py new file mode 100644 index 0000000000..e651982cee --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/job_queue/workflow_common.py @@ -0,0 +1,141 @@ +import os +import stat + +class WorkflowCommon(object): + + @staticmethod + def createExternalDumpJob(): + with open("dump_job", "w") as f: + f.write("INTERNAL FALSE\n") + f.write("EXECUTABLE dump.py\n") + f.write("MIN_ARG 2\n") + f.write("MAX_ARG 2\n") + f.write("ARG_TYPE 0 STRING\n") + f.write("ARG_TYPE 1 STRING\n") + + + with open("dump.py", "w") as f: + f.write("#!/usr/bin/env python\n") + f.write("import sys\n") + f.write("f = open('%s' % sys.argv[1], 'w')\n") + f.write("f.write('%s' % sys.argv[2])\n") + f.write("f.close()\n") + + st = os.stat("dump.py") + os.chmod("dump.py", st.st_mode | stat.S_IEXEC) # | stat.S_IXUSR | stat.S_IXGRP | stat.S_IXOTH + + with open("dump_workflow", "w") as f: + f.write("DUMP dump1 dump_text_1\n") + f.write("DUMP dump2 dump__2\n") + + + @staticmethod + def createInternalFunctionJob(): + with open("select_case_job", "w") as f: + f.write("INTERNAL True\n") + f.write("FUNCTION enkf_main_select_case_JOB\n") + f.write("MIN_ARG 1\n") + f.write("MAX_ARG 1\n") + f.write("ARG_TYPE 0 STRING\n") + + with open("printf_job", "w") as f: + f.write("INTERNAL True\n") + f.write("FUNCTION printf\n") + f.write("MIN_ARG 4\n") + f.write("MAX_ARG 5\n") + f.write("ARG_TYPE 0 STRING\n") + f.write("ARG_TYPE 1 INT\n") + f.write("ARG_TYPE 2 FLOAT\n") + f.write("ARG_TYPE 3 BOOL\n") + f.write("ARG_TYPE 4 STRING\n") + + + with open("compare_job", "w") as f: + f.write("INTERNAL True\n") + f.write("FUNCTION strcmp\n") + f.write("MIN_ARG 2\n") + f.write("MAX_ARG 2\n") + f.write("ARG_TYPE 0 STRING\n") + f.write("ARG_TYPE 1 STRING\n") + + + @staticmethod + def createErtScriptsJob(): + with open("subtract_script.py", "w") as f: + f.write("from ert.job_queue import ErtScript\n") + f.write("\n") + f.write("class SubtractScript(ErtScript):\n") + f.write(" def run(self, arg1, arg2):\n") + f.write(" return arg1 - arg2\n") + + + with open("subtract_script_job", "w") as f: + f.write("INTERNAL True\n") + f.write("SCRIPT subtract_script.py\n") + f.write("MIN_ARG 2\n") + f.write("MAX_ARG 2\n") + f.write("ARG_TYPE 0 FLOAT\n") + f.write("ARG_TYPE 1 FLOAT\n") + + + @staticmethod + def createWaitJob(): + with open("wait_job.py", "w") as f: + f.write("from ert.job_queue import ErtScript\n") + f.write("import time\n") + f.write("\n") + f.write("class WaitScript(ErtScript):\n") + f.write(" def dump(self, filename, content):\n") + f.write(" with open(filename, 'w') as f:\n") + f.write(" f.write(content)\n") + f.write("\n") + f.write(" def run(self, number, wait_time):\n") + f.write(" self.dump('wait_started_%d' % number, 'text')\n") + f.write(" start = time.time()\n") + f.write(" diff = 0\n") + f.write(" while not self.isCancelled() and diff < wait_time: \n") + f.write(" time.sleep(0.2)\n") + f.write(" diff = time.time() - start\n") + f.write("\n") + f.write(" if self.isCancelled():\n") + f.write(" self.dump('wait_cancelled_%d' % number, 'text')\n") + f.write(" else:\n") + f.write(" self.dump('wait_finished_%d' % number, 'text')\n") + f.write("\n") + f.write(" return None\n") + + + with open("external_wait_job.sh", "w") as f: + f.write("#!/usr/bin/env bash\n") + f.write("echo \"text\" > wait_started_$1\n") + f.write("sleep $2\n") + f.write("echo \"text\" > wait_finished_$1\n") + + st = os.stat("external_wait_job.sh") + os.chmod("external_wait_job.sh", st.st_mode | stat.S_IEXEC) # | stat.S_IXUSR | stat.S_IXGRP | stat.S_IXOTH + + with open("wait_job", "w") as f: + f.write("INTERNAL True\n") + f.write("SCRIPT wait_job.py\n") + f.write("MIN_ARG 2\n") + f.write("MAX_ARG 2\n") + f.write("ARG_TYPE 0 INT\n") + f.write("ARG_TYPE 1 INT\n") + + with open("external_wait_job", "w") as f: + f.write("INTERNAL False\n") + f.write("EXECUTABLE external_wait_job.sh\n") + f.write("MIN_ARG 2\n") + f.write("MAX_ARG 2\n") + f.write("ARG_TYPE 0 INT\n") + f.write("ARG_TYPE 1 INT\n") + + + with open("wait_workflow", "w") as f: + f.write("WAIT 0 1\n") + f.write("WAIT 1 10\n") + f.write("WAIT 2 1\n") + + with open("fast_wait_workflow", "w") as f: + f.write("WAIT 0 1\n") + f.write("EXTERNAL_WAIT 1 1\n") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/run/test_run.py b/ThirdParty/Ert/devel/python/test/ert_tests/run/test_run.py index 37f9f00298..c5c76ea85d 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/run/test_run.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/run/test_run.py @@ -1,39 +1,41 @@ -from ert.test_run import TestRun , path_exists -from ert_tests import ExtendedTestCase - +from ert.test import TestRun , path_exists , ExtendedTestCase class RunTest(ExtendedTestCase): + def setUp(self): + self.testConfig = self.createTestPath("local/run/config.txt") def test_init(self): with self.assertRaises(IOError): TestRun("Does/notExist") - tr = TestRun("test-data/local/run/config.txt") + tr = TestRun(self.testConfig) self.assertEqual( tr.config_file , "config.txt") + self.assertEqual(tr.ert_version , "stable") + + + def test_args(self): + tr = TestRun(self.testConfig , args=["-v" , "latest"]) + self.assertEqual(tr.ert_version , "latest") def test_cmd(self): - tr = TestRun("test-data/local/run/config.txt") + tr = TestRun(self.testConfig) self.assertEqual( tr.ert_cmd , TestRun.default_ert_cmd ) tr.ert_cmd = "/tmp/test" self.assertEqual( "/tmp/test" , tr.ert_cmd ) - def test_args(self): - tr = TestRun("test-data/local/run/config.txt") - self.assertEqual( tr.get_args() , []) - - tr.add_arg("-v") - self.assertEqual( tr.get_args() , ["-v"]) - tr.add_arg("latest") - self.assertEqual( tr.get_args() , ["-v" , "latest"]) + def test_args2(self): + tr = TestRun(self.testConfig , args = ["arg1","arg2","-v","latest"]) + self.assertEqual( tr.get_args() , ["arg1","arg2"]) + self.assertEqual(tr.ert_version , "latest") def test_workflows(self): - tr = TestRun("test-data/local/run/config.txt") + tr = TestRun(self.testConfig) self.assertEqual( tr.get_workflows() , []) tr.add_workflow( "wf1" ) @@ -42,26 +44,20 @@ def test_workflows(self): def test_run_no_workflow(self): - tr = TestRun("test-data/local/run/config.txt") + tr = TestRun(self.testConfig) with self.assertRaises(Exception): tr.run() - def test_name(self): - tr = TestRun("test-data/local/run/config.txt" , "Name") - self.assertEqual( "Name" , tr.name[:4] ) - - tr = TestRun("test-data/local/run/config.txt") - self.assertEqual( "test-data.local.run.config.txt" , tr.name[:len("test-data/local/run/config.txt")] ) def test_runpath(self): - tr = TestRun("test-data/local/run/config.txt" , "Name") + tr = TestRun(self.testConfig , "Name") self.assertEqual( TestRun.default_path_prefix , tr.path_prefix ) def test_check(self): - tr = TestRun("test-data/local/run/config.txt" , "Name") + tr = TestRun(self.testConfig , "Name") tr.add_check( path_exists , "some/file" ) with self.assertRaises(Exception): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/run_tests.py b/ThirdParty/Ert/devel/python/test/ert_tests/run_tests.py index 68877220b1..3b51a8ac17 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/run_tests.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/run_tests.py @@ -1,40 +1,9 @@ +#!/usr/bin/env python +import sys +import os +from ert.test import ErtTestRunner -try: - from unittest2 import TestLoader, TextTestRunner -except ImportError: - from unittest import TestLoader, TextTestRunner - - -def runTestsInDirectory(path="."): - loader = TestLoader() - tests = loader.discover(path) - testRunner = TextTestRunner() - testRunner.run(tests) - - -def runTestsInClass(classpath): - klass = importClass(classpath) - loader = TestLoader() - tests = loader.loadTestsFromTestCase(klass) - testRunner = TextTestRunner() - testRunner.run(tests) - - -def importClass(classpath): - dot = classpath.rfind(".") - classname = classpath[dot + 1:len(classpath)] - m = __import__(classpath[0:dot], globals(), locals(), [classname]) - return getattr(m, classname) - -def getTestsFromTestClass(test_class_path, argv=None): - klass = importClass(test_class_path) - klass.argv = argv - loader = TestLoader() - return loader.loadTestsFromTestCase(klass) - +sys.path.append( os.path.realpath( os.path.join(os.path.dirname( os.path.abspath( __file__)) , "../") )) if __name__ == '__main__': - # runTestsInDirectory() - runTestsInClass("ert_tests.util.test_string_list.StringListTest") - - print(getTestsFromTestClass("ert_tests.util.test_string_list.StringListTest")) + ErtTestRunner.runTestsInDirectory(".") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/sched/test_sched.py b/ThirdParty/Ert/devel/python/test/ert_tests/sched/test_sched.py index 1dcbeb5462..e5bd6a9d0c 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/sched/test_sched.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/sched/test_sched.py @@ -17,7 +17,7 @@ import datetime import os from ert.sched import SchedFile -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/server/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/server/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/server/test_client.py b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_client.py new file mode 100644 index 0000000000..2418376fcf --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_client.py @@ -0,0 +1,22 @@ +import socket + +class TestClient(object): + def __init__(self , port , host = "localhost"): + self.socket = socket.socket( socket.AF_INET , socket.SOCK_STREAM) + self.port = port + self.host = host + self.socket.connect((self.host , self.port)) + + + def send(self , data): + self.socket.sendall( data ) + + def recv(self): + data = self.socket.recv(1024) + return data + + @classmethod + def sendRecv(cls , port , data): + client = TestClient(port) + client.send( data ) + return client.recv() diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py new file mode 100644 index 0000000000..a5f6285f59 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py @@ -0,0 +1,63 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_server.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os +import time +import os +import signal +import json +import sys + +try: + from unittest2 import skipIf, skipUnless, skipIf +except ImportError: + from unittest import skipIf, skipUnless, skipIf + +from ert.server import ErtServer +from ert.util import StringList, TimeVector, DoubleVector + +from ert.test import ExtendedTestCase , TestAreaContext + + + +class ServerTest(ExtendedTestCase): + def setUp(self): + self.config_path = self.createTestPath("local/resopt/config/simple") + self.config_file = "config" + + + def testCreate(self): + with TestAreaContext("server/server") as work_area: + work_area.copy_directory_content(self.config_path) + + with self.assertRaises(IOError): + ert_server = ErtServer( "Does/not/exist" ) + + ert_server = ErtServer(self.config_file) + self.assertTrue( ert_server.isConnected() ) + ert_server.close() + self.assertTrue( not ert_server.isConnected() ) + + ert_server = ErtServer() + self.assertTrue( not ert_server.isConnected() ) + ert_server.open( self.config_file ) + self.assertTrue( ert_server.isConnected() ) + + cmd = ["STATUS"] + res = ert_server.evalCmd( cmd ) + self.assertEqual( res , ["OPEN"] ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/server/test_socket.py b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_socket.py new file mode 100644 index 0000000000..5dbd8d9b5d --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_socket.py @@ -0,0 +1,75 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_socket.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os +import time +import socket +import os +import signal +import json +import sys + +try: + from unittest2 import skipIf, skipUnless, skipIf +except ImportError: + from unittest import skipIf, skipUnless, skipIf + +from .test_client import TestClient +from ert.server import ErtSocket +from ert.util import StringList, TimeVector, DoubleVector + +from ert.test import ExtendedTestCase , TestAreaContext + + + + + + +class SocketTest(ExtendedTestCase): + def setUp(self): + self.config_path = self.createTestPath("local/resopt/config/simple") + self.config_file = "config" + self.port = 9125 + + + def sendRecv(self , send , expect): + recv = TestClient.sendRecv( self.port , json.dumps(send) + "\n") + self.assertEqual( json.loads(recv) , expect ) + + + def sendRecvRAW(self , send , expect): + recv = TestClient.sendRecv( self.port , send) + self.assertEqual( json.loads(recv) , expect ) + + + + def test_connect(self): + with TestAreaContext("server/socket") as work_area: + work_area.copy_directory_content(self.config_path) + pid = os.fork() + if pid == 0: + s = ErtSocket(self.config_file , self.port) + s.listen( ) + else: + time.sleep(0.50) + + self.sendRecv( ["ECHO" , "HEI"] , ["HEI"] ) + self.sendRecv( ["STATUS"] , ["OPEN"] ) + self.sendRecvRAW( "INVALID\n" , {"input" : "INVALID" , "ERROR" : "No JSON object could be decoded"}) + self.sendRecv( ["QUIT"] , ["QUIT"] ) + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_gui_import.py b/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_gui_import.py index 6217521c2c..cfed3f41f2 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_gui_import.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_gui_import.py @@ -16,7 +16,7 @@ # for more details. import os -from ert_tests import ExtendedTestCase +from ert.test.extended_testcase import ExtendedTestCase from ert_tests.import_tester import ImportTester diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_import.py b/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_import.py index 1f3ddf2402..4e696c7922 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_import.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/test_ert_import.py @@ -16,7 +16,7 @@ # for more details. import os -from ert_tests import ExtendedTestCase +from ert.test.extended_testcase import ExtendedTestCase from ert_tests.import_tester import ImportTester diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ctime.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ctime.py index eb04c76c35..380497efa8 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ctime.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ctime.py @@ -1,5 +1,7 @@ -from datetime import datetime -from ert.util import ctime +from datetime import datetime, date + +from ert.util import CTime + try: from unittest2 import TestCase @@ -9,13 +11,119 @@ class CTimeTest(TestCase): + def test_creation(self): + t0 = CTime(-60 * 60) + + t1 = CTime(t0) + self.assertEqual(t0, t1) + + t2 = CTime(datetime(1970, 1, 1, 0)) + self.assertEqual(t0, t2) + + t3 = CTime(date(1970, 1, 1)) + self.assertEqual(t0, t3) + + with self.assertRaises(NotImplementedError): + CTime("string") + + def test_c_time(self): - c_time = ctime(0) + c_time = CTime(0) self.assertEqual(str(c_time), "1970-01-01 01:00:00") - date_time = ctime(datetime(1970, 1, 1, 1, 0, 0)) + date_time = CTime(datetime(1970, 1, 1, 1, 0, 0)) self.assertEqual(c_time, date_time) - date_time_after = ctime(datetime(1970, 1, 1, 1, 0, 5)) + date_time_after = CTime(datetime(1970, 1, 1, 1, 0, 5)) + + self.assertTrue(date_time_after > date_time) + + + def test_math(self): + c1 = CTime(date(2000, 1, 1)) + c2 = CTime(date(2000, 1, 1)) + c3 = CTime(date(2000, 1, 1)) + + c3 += c1 + self.assertTrue(isinstance(c3, CTime)) + + c4 = c1 * 1.0 + self.assertTrue(isinstance(c4, CTime)) + self.assertTrue(isinstance(c1 + c2, CTime)) + + self.assertEqual((c1 + c2) * 0.5, date(2000, 1, 1)) + + + def test_comparison(self): + t0 = CTime(0) + t1 = CTime(0) + t2 = CTime(1) + + self.assertTrue(t0 == t1) + self.assertFalse(t0 != t1) + with self.assertRaises(TypeError): + t0 != 0.5 + + self.assertFalse(t0 < t1) + self.assertTrue(t0 < t2) + with self.assertRaises(TypeError): + t0 < 0.5 + + self.assertTrue(t0 <= t1) + self.assertTrue(t0 <= t2) + with self.assertRaises(TypeError): + t0 <= 0.5 + + self.assertFalse(t0 > t1) + self.assertFalse(t0 > t2) + with self.assertRaises(TypeError): + t0 > 0.5 + + self.assertTrue(t0 >= t1) + self.assertFalse(t0 >= t2) + with self.assertRaises(TypeError): + t0 >= 0.5 + + t3 = CTime(date(2050 , 1 , 1 )) + t4 = CTime(date(2060 , 1 , 1 )) + self.assertTrue( t1 < t3 ) + self.assertTrue( t3 < t4 ) + + t5 = CTime(t4) + self.assertTrue( t4 == t5 ) + + + + def test_range(self): + d1 = date(2000, 1, 1) + dt1 = datetime(2000, 1, 1, 0, 0, 0) + c1 = CTime(d1) + + d0 = date(1999, 1, 1) + dt0 = datetime(1999, 1, 1, 0, 0, 0) + c0 = CTime(d0) + + d2 = date(2001, 1, 1) + dt2 = datetime(2001, 1, 1, 0, 0, 0) + c2 = CTime(d2) + + self.assertTrue(d0 <= c1 < dt2) + self.assertTrue(c0 <= c1 < d2) + self.assertTrue(dt0 <= c1 < c2) + + self.assertFalse(d1 <= c0 < dt2) + self.assertFalse(c1 <= c0 < d2) + self.assertFalse(dt1 <= c0 < c2) + + self.assertTrue(d0 <= c0 < dt2) + self.assertTrue(c0 <= c0 < d2) + self.assertTrue(dt0 <= c0 < c2) + + self.assertFalse(d0 <= c2 < dt2) + self.assertFalse(c0 <= c2 < d2) + self.assertFalse(dt0 <= c2 < c2) + + self.assertTrue(d0 <= c2 <= dt2) + self.assertTrue(c0 <= c2 <= d2) + self.assertTrue(dt0 <= c2 <= c2) - self.assertTrue(date_time_after > date_time) \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_hash.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_hash.py index 1cee587b08..e0558b728a 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_hash.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_hash.py @@ -1,6 +1,6 @@ from ctypes import c_void_p from ert.util import Hash, StringHash, DoubleHash, IntegerHash -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class HashTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_latex.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_latex.py index 631563c07c..96c7fee171 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_latex.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_latex.py @@ -5,8 +5,7 @@ import os from ert.util import LaTeX -from ert.util.test_area import TestAreaContext -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase , TestAreaContext class LatexTest(ExtendedTestCase): @@ -58,4 +57,4 @@ def test_report(self): def test_target(self): lx = LaTeX("%s/report_OK.tex" % self.statoil_path) self.assertTrue(lx.compile()) - self.assertTrue(os.path.exists(lx.target)) \ No newline at end of file + self.assertTrue(os.path.exists(lx.target)) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_matrix.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_matrix.py index 4c134c492b..c1bae1d8fe 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_matrix.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_matrix.py @@ -1,10 +1,13 @@ from ert.util import Matrix -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class MatrixTest(ExtendedTestCase): def test_matrix(self): m = Matrix(2, 3) + self.assertEqual(m.rows(), 2) + self.assertEqual(m.columns(), 3) + self.assertEqual(m[(0, 0)], 0) m[(1, 1)] = 1.5 @@ -22,8 +25,55 @@ def test_matrix(self): with self.assertRaises(IndexError): m[0, 3] = 0 + def test_matrix_set(self): + m1 = Matrix(2,2) + m1.setAll(99) + self.assertEqual( 99 , m1[0,0] ) + self.assertEqual( 99 , m1[1,1] ) + m2 = Matrix(2,2 , value = 99) + self.assertEqual(m1,m2) + + + def test_matrix_scale(self): + m = Matrix(2,2 , value = 1) + m.scaleColumn(0 , 2) + self.assertEqual(2 , m[0,0]) + self.assertEqual(2 , m[1,0]) + + m.setAll(1) + m.scaleRow(1 , 2 ) + self.assertEqual(2 , m[1,0]) + self.assertEqual(2 , m[1,1]) + + with self.assertRaises(IndexError): + m.scaleColumn(10 , 99) + + with self.assertRaises(IndexError): + m.scaleRow(10 , 99) + + + + + def test_matrix_equality(self): + m = Matrix(2, 2) + m[0, 0] = 2 + m[1, 1] = 4 + + s = Matrix(2, 3) + s[0, 0] = 2 + s[1, 1] = 4 + + self.assertNotEqual(m, s) + + r = Matrix(2, 2) + r[0, 0] = 2 + r[1, 1] = 3 + + self.assertNotEqual(m, r) + + r[1, 1] = 4 - #todo: random crashes happens if we do this... - #m[2, 2] = 2 # no exception raised... + self.assertEqual(m, r) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_rng.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_rng.py index c6b0fe6ac7..a8e848e59e 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_rng.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_rng.py @@ -1,6 +1,6 @@ from ert.util.enums import RngAlgTypeEnum, RngInitModeEnum from ert.util.rng import RandomNumberGenerator -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class RngTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_stat.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_stat.py index dab76c3a76..e2e0a944b8 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_stat.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_stat.py @@ -1,6 +1,6 @@ import random from ert.util import DoubleVector, quantile, quantile_sorted -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class StatTest(ExtendedTestCase): @@ -18,4 +18,4 @@ def test_stat_quantiles(self): # print quantile_sorted( v , 0.20 ) # print quantile_sorted( v , 0.30 ) # print quantile_sorted( v , 0.40 ) - # print quantile_sorted( v , 0.50 ) \ No newline at end of file + # print quantile_sorted( v , 0.50 ) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_substitution_list.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_substitution_list.py index 27cc56bf05..41d82cbcfc 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_substitution_list.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_substitution_list.py @@ -1,5 +1,5 @@ from ert.util import SubstitutionList -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class SubstitutionListTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_thread_pool.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_thread_pool.py new file mode 100644 index 0000000000..3c772ec633 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_thread_pool.py @@ -0,0 +1,101 @@ +import time +from ert.util import ThreadPool +from ert.util.thread_pool import Task +from ert.test import ExtendedTestCase + + +class ThreadPoolTest(ExtendedTestCase): + + + def sleepTask(self, *args, **kwargs): + time.sleep(args[0]) + + def numberer(self, index, result): + result[index] = True + + def test_pool_creation(self): + pool = ThreadPool(4) + + self.assertEqual(4, pool.poolSize()) + + def noop(*args, **kwargs): + pass + + pool.addTask(noop) + self.assertEqual(1, pool.taskCount()) + + pool.addTask(noop, 1, 2, 3) + self.assertEqual(2, pool.taskCount()) + + pool.addTask(noop, 1, 2, 3, name="name", group="group", purpose="porpoise") + self.assertEqual(3, pool.taskCount()) + + self.assertEqual(pool.runningCount(), 0) + self.assertEqual(pool.doneCount(), 0) + + + def test_pool_execution(self): + pool = ThreadPool(4) + + result = {} + for index in range(10): + pool.addTask(self.numberer, index, result=result) + + pool.nonBlockingStart() + pool.join() + + for index in range(10): + self.assertTrue(index in result) + self.assertTrue(result[index]) + + self.assertFalse(pool.hasFailedTasks()) + + + + def test_pool_unbound_fail(self): + pool = ThreadPool(4) + + self.assertEqual(4, pool.poolSize()) + pool.addTask(ThreadPoolTest.numberer, 0, {}) + + pool.nonBlockingStart() + pool.join() + + self.assertTrue(pool.hasFailedTasks()) + + + def test_fill_pool(self): + pool = ThreadPool(4) + + for index in range(10): + pool.addTask(self.sleepTask, 2) + + pool.nonBlockingStart() + time.sleep(0.5) + self.assertEqual(pool.doneCount(), 0) + self.assertEqual(pool.runningCount(), 4) + + pool.join() + + + + def test_task(self): + def sleeping(): + time.sleep(1) + + task = Task(sleeping) + + self.assertFalse(task.hasStarted()) + self.assertFalse(task.isRunning()) + self.assertFalse(task.isDone()) + + task.start() + + self.assertTrue(task.hasStarted()) + self.assertTrue(task.isRunning()) + + task.join() + + self.assertFalse(task.isRunning()) + self.assertTrue(task.isDone()) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ui_return.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ui_return.py index 948f08323e..2d4fcffef5 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ui_return.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_ui_return.py @@ -1,6 +1,6 @@ from ert.util import UIReturn from ert.util.enums import UIReturnStatusEnum -from ert_tests import ExtendedTestCase +from ert.test import ExtendedTestCase class UIReturnTest(ExtendedTestCase): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py index d2b3d115a2..73b5d586bf 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py @@ -17,14 +17,14 @@ import copy -from datetime import datetime +import datetime try: from unittest2 import TestCase except ImportError: from unittest import TestCase -from ert.util import DoubleVector, IntVector, BoolVector, TimeVector, ctime +from ert.util import DoubleVector, IntVector, BoolVector, TimeVector, CTime class UtilTest(TestCase): @@ -66,8 +66,8 @@ def test_double_vector(self): self.assertEqual(list(v), [0.66, 0.66, 0.66, 0.66]) v.clear() - v.default = 0.75 - self.assertEqual(v.default, 0.75) + v.setDefault(0.75) + self.assertEqual(v.getDefault(), 0.75) v[2] = 0.0 self.assertEqual(v[1], 0.75) @@ -107,7 +107,7 @@ def test_vector_operations_with_exceptions(self): def test_bool_vector(self): b = BoolVector() - b.default = True + b.setDefault(True) b[4] = False @@ -120,11 +120,30 @@ def test_activeList(self): self.assertTrue(active_list[0] == 1) self.assertTrue(active_list[2] == 100) self.assertTrue(active_list[7] == 105) + self.assertEqual( active_list.count(100) , 1) + active_list.append(100) + active_list.append(100) + self.assertEqual( active_list.count(100) , 3) active_list = IntVector.active_list("1,10,100-105X") self.assertFalse(active_list) + + def test_contains_int(self): + iv = IntVector() + iv[0] = 1 + iv[1] = 10 + iv[2] = 100 + iv[3] = 1000 + + self.assertTrue( 1 in iv ) + self.assertTrue( 10 in iv ) + self.assertTrue( 88 not in iv ) + self.assertTrue( 99 not in iv ) + + + def test_activeMask(self): active_list = BoolVector.active_mask("1 , 4 - 7 , 10") self.assertTrue(len(active_list) == 11) @@ -134,12 +153,16 @@ def test_activeMask(self): self.assertFalse(active_list[9]) self.assertFalse(active_list[8]) + self.assertEqual(6, active_list.count(True)) + active_list = BoolVector.active_mask("1,4-7,10X") self.assertFalse(active_list) + + def test_update_active_mask(self): - vec = BoolVector(0, 10) + vec = BoolVector(False, 10) self.assertTrue(BoolVector.updateActiveMask("1-2,5", vec)) self.assertTrue(vec[1]) @@ -148,7 +171,7 @@ def test_update_active_mask(self): self.assertFalse(vec[4]) - vec = BoolVector(0, 10) + vec = BoolVector(False, 10) self.assertTrue(BoolVector.updateActiveMask("1-5,2,3", vec)) self.assertTrue(vec[1]) @@ -160,7 +183,7 @@ def test_update_active_mask(self): self.assertFalse(vec[6]) - vec = BoolVector(0, 10) + vec = BoolVector(False, 10) self.assertTrue(BoolVector.updateActiveMask("5,6,7,15", vec)) self.assertTrue(vec[5]) @@ -171,6 +194,54 @@ def test_update_active_mask(self): self.assertEqual(len(vec), 16) + def test_pop(self): + a = IntVector() + a.append(1) + a.append(2) + + self.assertEqual( a.pop() , 2 ) + self.assertEqual( len(a) , 1 ) + self.assertEqual( a.pop() , 1 ) + self.assertEqual( len(a) , 0 ) + with self.assertRaises(ValueError): + a.pop() + + + def test_shift(self): + a = IntVector() + a.append(1) + a.append(2) + a.append(3) + a.append(4) + a.append(5) + + with self.assertRaises(ValueError): + a >> -1 + + + with self.assertRaises(ValueError): + a << -1 + + with self.assertRaises(ValueError): + a << -6 + + b = a << 2 + self.assertEqual(list(b) , [3,4,5]) + + print a + a <<= 2 + print a + self.assertEqual(list(a) , [3,4,5]) + + b = a >> 2 + self.assertEqual(list(b) , [0,0,3,4,5]) + + + a >>= 2 + self.assertEqual(list(a) , [0,0,3,4,5]) + + + def test_int_vector(self): a = IntVector() @@ -182,15 +253,15 @@ def test_int_vector(self): self.assertEqual(list(a), [1, 2, 3, 4, 5]) - a.rsort() + a.sort(reverse=True) self.assertEqual(list(a), [5, 4, 3, 2, 1]) self.assertTrue(a.max, 5) self.assertTrue(a.min, 1) - self.assertTrue(a.min_index(), 4) + self.assertTrue(a.minIndex(), 4) - self.assertEqual(a.max_index(reverse=True), 0) - self.assertEqual(a.max_index(reverse=False), 0) + self.assertEqual(a.maxIndex(reverse=True), 0) + self.assertEqual(a.maxIndex(reverse=False), 0) a[4] = 5 self.assertTrue(a[4] == 5) @@ -232,10 +303,10 @@ def test_true(self): def test_time_vector(self): time_vector = TimeVector() - time1 = ctime(datetime(2013, 8, 13, 0, 0, 0)) - time2 = ctime(datetime(2013, 8, 13, 1, 0, 0)) + time1 = CTime(datetime.datetime(2013, 8, 13, 0, 0, 0)) + time2 = CTime(datetime.datetime(2013, 8, 13, 1, 0, 0)) - time_vector.default = time2 + time_vector.setDefault(time2) time_vector.append(time1) time_vector[2] = time2 @@ -244,3 +315,96 @@ def test_time_vector(self): self.assertEqual(time_vector[1], time2) self.assertEqual(time_vector[2], time2) + tv1 = TimeVector( default_value = datetime.date( 2000 , 1,1) , initial_size = 2) + self.assertEqual( tv1[0] , datetime.date(2000,1,1)) + + tv2 = TimeVector() + tv2.append( time2 ) + print tv2 + + + def test_permutation_vector(self): + vector = DoubleVector() + + for i in range(5, 0, -1): + vector.append(i) + + permutation_vector = vector.permutationSort() + + for index, value in enumerate(range(5, 0, -1)): + self.assertEqual(vector[index], value) + + vector.permute(permutation_vector) + + for index, value in enumerate(range(1, 6)): + self.assertEqual(vector[index], value) + + + def test_contains_time(self): + start = datetime.datetime(2010 , 1 , 1 , 0,0,0) + end = datetime.datetime(2010 , 2 , 1 , 0,0,0) + other = datetime.datetime(2010 , 1 , 15 , 0,0,0) + + tv = TimeVector() + tv.append( start ) + tv.append( end ) + + self.assertTrue( start in tv ) + self.assertTrue( end in tv ) + self.assertTrue( other not in tv) + + + + def test_time_vector_regular(self): + start = datetime.datetime(2010 , 1 , 1 , 0,0,0) + end = datetime.datetime(2010 , 2 , 1 , 0,0,0) + + with self.assertRaises(ValueError): + trange = TimeVector.createRegular( end , start , "1X" ) + + with self.assertRaises(TypeError): + trange = TimeVector.createRegular( start , end , "1X" ) + + with self.assertRaises(TypeError): + trange = TimeVector.createRegular( start , end , "1" ) + + with self.assertRaises(TypeError): + trange = TimeVector.createRegular( start , end , "X" ) + + with self.assertRaises(TypeError): + trange = TimeVector.createRegular( start , end , "1.5Y" ) + + trange = TimeVector.createRegular(start , end , "d") + trange = TimeVector.createRegular(start , end , "D") + trange = TimeVector.createRegular(start , end , "1d") + self.assertEqual( trange[0].datetime() , start ) + self.assertEqual( trange[-1].datetime() , end ) + date = start + delta = datetime.timedelta(days = 1) + for t in trange: + self.assertEqual(t , date) + date += delta + + + end = datetime.datetime(2010 , 1 , 10 , 0,0,0) + trange = TimeVector.createRegular(start , end , "2d") + self.assertEqual( trange[-1].datetime() , datetime.datetime(2010 , 1 , 9 , 0,0,0)) + self.assertEqual( 5 , len(trange)) + + + end = datetime.datetime(2012 , 1 , 10 , 0,0,0) + trange = TimeVector.createRegular(start , end , "3M") + self.assertTrue( trange[-1] == datetime.datetime(2012 , 1 , 1 , 0,0,0)) + self.assertTrue( trange[1] == datetime.datetime(2010 , 4 , 1 , 0,0,0)) + self.assertTrue( trange[2] == datetime.datetime(2010 , 7 , 1 , 0,0,0)) + self.assertTrue( trange[3] == datetime.datetime(2010 , 10 , 1 , 0,0,0)) + self.assertTrue( trange[4] == datetime.datetime(2011 , 1 , 1 , 0,0,0)) + + start = datetime.datetime(1980 , 1 , 1 , 0,0,0) + end = datetime.datetime(2020 , 1 , 1 , 0,0,0) + trange = TimeVector.createRegular(start , end , "2Y") + for (y,t) in zip(xrange(1980,2022,2) , trange): + self.assertTrue( t == datetime.datetime(y,1,1,0,0,0) ) + + trange = TimeVector.createRegular(start , datetime.date(2050, 1 , 1) , "1Y") + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/well/__init__.py b/ThirdParty/Ert/devel/python/test/ert_tests/well/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py new file mode 100644 index 0000000000..87ce6f3b51 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py @@ -0,0 +1,374 @@ +import datetime +from ert.ecl import EclGrid, EclFile, EclFileFlagEnum +from ert.test import ExtendedTestCase +from ert.util.ctime import CTime +from ert.well import WellInfo, WellConnection, WellTypeEnum, WellConnectionDirectionEnum, WellSegment + + +class EclWellTest(ExtendedTestCase): + ALL_WELLS = ['E5H', 'G1H', 'M41', 'J41', 'D10H', 'P41', 'L41', 'M42', 'S41', 'S13H', 'Q12HT2', 'O41', 'L11H', 'Q21H', + 'E6CH', 'D4Y1H', 'D4Y2H', 'I13Y1H', 'Q21AY1H', 'F5AH', 'O14Y4HT2', 'K24Y1H', 'K24Y3H', 'S21H', 'N11H', + 'L23Y1H', 'D7AY1H', 'S21AHT2', 'H2AH', 'S21AHT3', 'L23Y6H', 'N11AH', 'N11BY1H', 'X23Y2H', 'N22Y3HT3', + 'G1BY1HT2', 'Q21BY1H', 'Q21BY2T2', 'A08', 'A37', 'P24Y4H', 'A11', 'A33', 'P21BY1H', 'H6BY2H', 'M24AH', + 'TOGIB2H', 'TOGIB3H', 'TOGIB4H', 'TOGIB5H', 'TOGIB6H', 'TAP21', 'D1AH', 'D1BYH', 'D2H', 'D2AYH', 'D4YH', + 'D5AH', 'D6H', 'D7H', 'D7AYH', 'D8AH', 'D8BYH', 'E1AH', 'E1BYH', 'E3YH', 'E4H', 'E5AH', 'E6BH', 'E6DYH', + '31/2-T1', 'F1AH', 'F1BYH', 'F4AHT2', 'F5H', 'F5BYH', 'F6AH', 'F6BYH', '2B3H', 'G1AHT2', 'G1BYH', 'G3H', + 'G3AYH', 'G4AH', 'G4BYH', 'G6HT2', 'G6AYH', '31/5-T1', 'H1AH', 'H2BYH', 'H2HT2', 'H3ABH', 'H3CYH', 'H4HT2', + 'H5AHT2', 'H6AH', 'H6BYH', 'Z1H', 'Z2H', 'I11AH', 'I12AYH', 'I13YH', 'I14AHT2', 'I14BYH', 'I21AHT2', + 'I21BYH', 'I22AH', 'I23AH', 'I32YH', 'J11AH', 'J12H', 'J13H', 'J13AYH', 'J14H', 'J14AYH', 'J21YH', 'J22YH', + 'J22AYH', 'J23AH', 'J24HT2', 'J24AYH', 'K11YH', 'K12AH', 'K12BYH', 'K13AH', 'K14AYH', 'K21AYH', 'K22AH', + 'K23AH', 'K24YH', 'L11AH', 'L11BYH', 'L12Y', 'L13H', 'L13AYH', 'L14YH', 'L21AYH', 'L22AYH', 'L23YH', + 'L24AYH', 'M11H', 'M12H', 'M13YH', 'M14AHT2', 'M14BYH', 'M21H', 'M22H', 'M23AH', 'M24YH', 'N11BYH', + 'N12HT2', 'N13H', 'N14AH', 'N21YH', 'N22YH', 'N23AYH', 'N24YH', 'O11H', 'O11AYH', 'O12AH', 'O13AH', + 'O13BYH', 'O14YH', 'O21YH', 'O23YH', 'O26YH', 'P11YH', 'P11AYH', 'P12H', 'P13AHT2', 'P13BYH', 'P14AHT2', + 'P14BYH', 'P21AYH', 'P21BYH', 'P22AYH', 'P23YH', 'P24YH', 'P24Y1H', 'Q11AHT2', 'Q11BYH', 'Q12AH', 'Q12BH', + 'Q13AH', 'Q14H', 'Q14AYH', 'Q21AYH', 'Q21BH1', 'Q21BH2', 'S11HT3', 'S12H', 'S13AH', 'S14AH', 'S14BYH', + 'S21BYH', 'S22AH', 'S23HT2', 'S23AYH', 'S24YH', 'S31H', 'X11AH', 'X11BYH', 'X12H', 'X12AH', 'X13YH', + 'X14AYH', 'X21H', 'X22H', 'X22AYH', 'X23YH', 'X24AH', 'Y11AH', 'Y11BYH', 'Y12YH', 'Y13AH', 'Y13BYH', + 'Y14AYH', 'Y21YH', 'Y22YH', 'Y23AHT2', 'Y23CYH', 'Y24AH'] + + + @classmethod + def setUpClass(cls): + EclWellTest.__well_info = None + + + def getWellInfo(self): + """ @rtype: WellInfo """ + if EclWellTest.__well_info is None: + grid_path = self.createTestPath("Statoil/ECLIPSE/Troll/MSW/T07-4A-W2012-16-F3.EGRID") + rst_path_1 = self.createTestPath("Statoil/ECLIPSE/Troll/MSW/T07-4A-W2012-16-F3.X0135") + + grid = EclGrid(grid_path) + + rst_file = EclFile(rst_path_1, EclFileFlagEnum.ECL_FILE_CLOSE_STREAM) + + EclWellTest.__well_info = WellInfo(grid, rst_file) + + + return EclWellTest.__well_info + + + def test_construction(self): + grid_path = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.EGRID") + rst_path_1 = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.X0011") + rst_path_2 = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.X0022") + rst_path_3 = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.X0035") + rst_path_4 = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.X0061") + + grid = EclGrid(grid_path) + + def checkWellInfo(well_info, well_count, report_step_count): + self.assertEqual(len(well_info), well_count) + + for index, well_time_line in enumerate(well_info): + self.assertEqual(len(well_time_line), report_step_count[index]) + + well_info = WellInfo(grid, rst_path_1) + checkWellInfo(well_info, well_count=5, report_step_count=[1, 1, 1, 1, 1]) + + well_info = WellInfo(grid, EclFile(rst_path_1)) + checkWellInfo(well_info, well_count=5, report_step_count=[1, 1, 1, 1, 1]) + + well_info = WellInfo(grid, [rst_path_1, rst_path_2, rst_path_3]) + checkWellInfo(well_info, well_count=8, report_step_count=[3, 3, 3, 3, 3, 2, 2, 2]) + + well_info = WellInfo(grid, [EclFile(rst_path_1), EclFile(rst_path_2), rst_path_3, EclFile(rst_path_4)]) + checkWellInfo(well_info, well_count=8, report_step_count=[4, 4, 4, 4, 4, 3, 3, 3]) + + + well_info = WellInfo(grid) + well_info.addWellFile(rst_path_1) + + checkWellInfo(well_info, well_count=5, report_step_count=[1, 1, 1, 1, 1]) + + well_info.addWellFile(EclFile(rst_path_2)) + checkWellInfo(well_info, well_count=8, report_step_count=[2, 2, 2, 2, 2, 1, 1, 1]) + + well_info.addWellFile(EclFile(rst_path_3)) + checkWellInfo(well_info, well_count=8, report_step_count=[3, 3, 3, 3, 3, 2, 2, 2]) + + well_info.addWellFile(rst_path_4) + checkWellInfo(well_info, well_count=8, report_step_count=[4, 4, 4, 4, 4, 3, 3, 3]) + + + + def test_well_type_enum(self): + source_file_path = "libecl_well/include/ert/ecl_well/well_const.h" + self.assertEnumIsFullyDefined(WellTypeEnum, "well_type_enum", source_file_path) + + + def test_well_connection_direction_enum(self): + source_file_path = "libecl_well/include/ert/ecl_well/well_conn.h" + self.assertEnumIsFullyDefined(WellConnectionDirectionEnum, "well_conn_dir_enum", source_file_path) + + + def test_well_info(self): + well_info = self.getWellInfo() + self.assertEqual(len(well_info), 222) + + all_well_names = well_info.allWellNames() + + self.assertEqual(len(well_info), len(all_well_names)) + self.assertEqual(EclWellTest.ALL_WELLS, all_well_names) + + for well_name in all_well_names: + self.assertTrue(well_name in well_info) + + self.assertEqual(well_info[0], well_info[all_well_names[0]]) + self.assertEqual(well_info[1], well_info[all_well_names[1]]) + self.assertEqual(well_info[221], well_info[all_well_names[221]]) + + self.assertNotEqual(well_info[0], well_info[1]) + + well_time_lines = [wtl for wtl in well_info] + self.assertEqual(len(well_time_lines), len(well_info)) + + with self.assertRaises(IndexError): + err = well_info[222] + + with self.assertRaises(KeyError): + err = well_info["Well"] + + + + + def test_well_time_line(self): + well_info = self.getWellInfo() + + for well_time_line in well_info: + self.assertEqual(len(well_time_line), 1) + + well_states = set() + for well_name in EclWellTest.ALL_WELLS: + well_time_line = well_info[well_name] + well_states.add(well_time_line[0]) + + with self.assertRaises(IndexError): + err = well_time_line[1] + + self.assertEqual(len(well_states), len(EclWellTest.ALL_WELLS)) + + + + def test_well_state(self): + well_info = self.getWellInfo() + + sim_time = CTime(datetime.date(2000, 1, 1)) + open_states = {True: 0, False: 0} + msw_states = {True: 0, False: 0} + well_types = {WellTypeEnum.UNDOCUMENTED_ZERO: 0, + WellTypeEnum.PRODUCER: 0, + WellTypeEnum.GAS_INJECTOR: 0, + WellTypeEnum.OIL_INJECTOR: 0, + WellTypeEnum.WATER_INJECTOR: 0} + + segments = set() + branches = set() + connections = set() + connections_count = 0 + + for index, well_name in enumerate(EclWellTest.ALL_WELLS): + well_time_line = well_info[well_name] + well_state = well_time_line[0] + + self.assertEqual(well_state.name(), well_name) + well_number = well_state.wellNumber() + self.assertEqual(well_number, index) + + self.assertEqual(well_state.reportNumber(), 135) + self.assertEqual(well_state.simulationTime(), sim_time) + + open_states[well_state.isOpen()] += 1 + msw_states[well_state.isMultiSegmentWell()] += 1 + + well_types[well_state.wellType()] += 1 + + self.assertTrue(well_state.hasGlobalConnections()) + global_connections = well_state.globalConnections() + connections_count += len(global_connections) + connections.update(global_connections) + + # branches.add(well_state.branches()) + # segments.add(well_state.segments()) + + self.assertEqual(open_states[True], 53) + self.assertEqual(open_states[False], 169) + + self.assertEqual(msw_states[True], 169) + self.assertEqual(msw_states[False], 53) + + self.assertEqual(well_types[WellTypeEnum.UNDOCUMENTED_ZERO], 0) + self.assertEqual(well_types[WellTypeEnum.WATER_INJECTOR], 0) + self.assertEqual(well_types[WellTypeEnum.OIL_INJECTOR], 0) + self.assertEqual(well_types[WellTypeEnum.GAS_INJECTOR], 1) + self.assertEqual(well_types[WellTypeEnum.PRODUCER], 221) + + self.assertEqual(len(connections), connections_count) + + + + def test_well_segments(self): + well_info = self.getWellInfo() + + well_name = "X22AYH" + well_time_line = well_info[well_name] + well_state = well_time_line[0] + + segments = well_state.segments() + + branch_ids = [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, + 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, + 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, + 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55] + + outlet_ids = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, + 27, 1, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, + 52, 53, 54, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, + 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 45, 45, 47, 48, 49, 50, 51, + 52, 53, 54, 55] + + depths = [1554.0, 1557.505, 1557.506, 1557.50540469, 1557.75140469, 1558.24240469, 1558.24240469, 1557.75340469, + 1557.50740469, 1557.50658613, 1557.50628848, 1557.50584678, 1557.50384678, 1557.50484678, 1557.50402823, + 1557.50380498, 1557.50454913, 1557.50425147, 1557.50325147, 1557.50273057, 1557.50473057, 1557.50373057, + 1557.5038794, 1557.5048794, 1557.50398643, 1557.50406085, 1557.50606085, 1557.50670767, 1557.635, 1557.509, + 1557.504, 1557.503, 1557.502, 1557.50242878, 1557.50542878, 1557.50505671, 1557.50602409, 1557.50602409, + 1557.50402409, 1557.50485764, 1557.50563489, 1557.50543796, 1557.50643796, 1557.50843796, 1557.50799148, + 1557.50709851, 1557.50665427, 1557.50865427, 1557.50943383, 1557.50543383, 1557.50443383, 1557.50495473, + 1557.504285, 1557.50473149, 1557.50442009, 1557.505, 1557.506, 1557.50540469, 1557.75140469, 1558.24240469, + 1558.24240469, 1557.75340469, 1557.50740469, 1557.50658613, 1557.50628848, 1557.50584678, 1557.50384678, + 1557.50484678, 1557.50402823, 1557.50380498, 1557.50454913, 1557.50425147, 1557.50325147, 1557.50273057, + 1557.50473057, 1557.50373057, 1557.5038794, 1557.5048794, 1557.50398643, 1557.50406085, 1557.50606085, + 1557.50670767, 1557.635, 1557.509, 1557.504, 1557.503, 1557.502, 1557.50242878, 1557.50542878, 1557.50505671, + 1557.50602409, 1557.50602409, 1557.50402409, 1557.50485764, 1557.50563489, 1557.50543796, 1557.50643796, + 1557.50799148, 1557.50799148, 1557.50665427, 1557.50865427, 1557.50943383, 1557.50543383, 1557.50443383, + 1557.50495473, 1557.504285, 1557.50473149, 1557.50442009] + + lengths = [1853.483, 525.634, 89.101, 148.227, 105.066, 70.981, 50.194, 71.215, 129.929, 141.712, 141.239, 108.247, + 200.032, 116.122, 141.525, 141.983, 112.622, 72.694, 105.195, 149.555, 128.22, 83.537, 112.533, 155.336, + 86.552, 71.427, 129.949, 92.347, 210.312, 58.0, 218.375, 111.0, 250.925, 76.233, 72.565, 127.481, 97.987, + 75.648, 121.119, 129.137, 188.157, 109.433, 142.914, 84.9, 47.458, 57.507, 55.704, 211.767, 121.219, + 143.23, 145.666, 146.044, 88.195, 72.891, 58.92, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, + 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, + 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1] + + total_lengths = [1853.483, 2379.117, 2468.218, 2616.445, 2721.511, 2792.492, 2842.686, 2913.901, 3043.83, 3185.542, + 3326.781, 3435.028, 3635.06, 3751.182, 3892.707, 4034.69, 4147.312, 4220.006, 4325.201, 4474.756, + 4602.976, 4686.513, 4799.046, 4954.382, 5040.934, 5112.361, 5242.31, 5334.657, 2063.795, 2121.795, + 2340.17, 2451.17, 2702.095, 2778.328, 2850.893, 2978.374, 3076.361, 3152.009, 3273.128, 3402.265, + 3590.422, 3699.855, 3842.769, 3927.669, 3975.127, 4032.634, 4088.338, 4300.105, 4421.324, 4564.554, + 4710.22, 4856.264, 4944.459, 5017.35, 5076.27, 2379.217, 2468.318, 2616.545, 2721.611, 2792.592, + 2842.786, 2914.001, 3043.93, 3185.642, 3326.881, 3435.128, 3635.16, 3751.282, 3892.807, 4034.79, + 4147.412, 4220.106, 4325.301, 4474.856, 4603.076, 4686.613, 4799.146, 4954.482, 5041.034, 5112.461, + 5242.41, 5334.757, 2063.895, 2121.895, 2340.27, 2451.27, 2702.195, 2778.428, 2850.993, 2978.474, + 3076.461, 3152.109, 3273.228, 3402.365, 3590.522, 3699.955, 3842.869, 3975.227, 3975.227, 4088.438, + 4300.205, 4421.424, 4564.654, 4710.32, 4856.364, 4944.559, 5017.45, 5076.37] + + link_count = 0 + main_stem = {True: 0, False: 0} + nearest_wellhead = {True: 0, False: 0} + for index, segment in enumerate(segments): + assert isinstance(segment, WellSegment) + self.assertEqual(segment.id(), index + 1) + link_count += segment.linkCount() + self.assertEqual(segment.branchId(), branch_ids[index]) + self.assertEqual(segment.outletId(), outlet_ids[index]) + + self.assertTrue(segment.isActive()) + main_stem[segment.isMainStem()] += 1 + nearest_wellhead[segment.isNearestWellHead()] += 1 + + self.assertFloatEqual(segment.depth(), depths[index]) + self.assertFloatEqual(segment.length(), lengths[index]) + self.assertFloatEqual(segment.totalLength(), total_lengths[index]) + + if index == 0: + self.assertEqual(segment.diameter(), 0.0) + else: + self.assertEqual(segment.diameter(), 0.159) + + + self.assertEqual(main_stem[True], 28) + self.assertEqual(main_stem[False], 80) + + self.assertEqual(nearest_wellhead[True], 1) + self.assertEqual(nearest_wellhead[False], 107) + + self.assertEqual(link_count, 53) + + + + def test_well_connections(self): + well_info = self.getWellInfo() + + well_name = "H6BY2H" + well_connections_ijk = [(33, 157, 9), (32, 157, 9), (32, 157, 51), (32, 157, 52), + (32, 157, 53), (32, 157, 54), (32, 157, 55), (32, 157, 56), + (32, 157, 57), (31, 157, 57), (31, 158, 57), (31, 158, 56), + (30, 158, 56), (29, 158, 56), (29, 157, 56), (28, 157, 56), + (28, 158, 56), (28, 158, 55), (27, 158, 55), (27, 158, 54), + (26, 158, 54), (26, 158, 53), (25, 158, 53), (24, 158, 53), + (23, 158, 53), (23, 158, 54), (22, 158, 54), (21, 158, 54), + (20, 158, 54), (20, 158, 55), (19, 158, 55), (19, 158, 54), + (18, 158, 54), (17, 158, 54), (16, 158, 54), (16, 158, 55), + (15, 158, 55), (15, 158, 54), (15, 158, 53), (14, 158, 54), + (13, 158, 54), (13, 158, 55), (12, 158, 55), (12, 157, 55)] + + well_connection_factors = [3022.45092773, 171.561004639, 237.263000488, 135.57800293, 177.925994873, 289.058990479, + 1081.09997559, 1575.79101562, 3679.54907227, 2865.51489258, 3999.2199707, 14205.3300781, + 1864.43005371, 1296.47302246, 3.40599989891, 2012.7199707, 2656.25390625, 4144.21923828, + 6.22700023651, 96.4029998779, 0.144999995828, 80.81199646, 114.416999817, 97.5159988403, + 26.8530006409, 0.12800000608, 34238.15625, 34493.7070312, 2618.16894531, 31999.1992188, + 27874.6191406, 7343.23681641, 35418.1679688, 34612.6523438, 3486.13500977, 15446.3691406, + 65.4499969482, 8687.91113281, 13238.8037109, 5644.90380859, 7499.49707031, 12863.5292969, + 12277.4716797, 19404.5488281] + + well_time_line = well_info[well_name] + well_state = well_time_line[0] + + self.assertFalse(well_state.isMultiSegmentWell()) + + self.assertTrue(well_state.hasGlobalConnections()) + global_connections = well_state.globalConnections() + + for index, connection in enumerate(global_connections): + assert isinstance(connection, WellConnection) + self.assertTrue(connection.isOpen()) + self.assertEqual(connection.ijk(), well_connections_ijk[index]) + self.assertFalse(connection.isMultiSegmentWell()) + self.assertEqual(connection.segmentId(), -999) + self.assertFalse(connection.isFractureConnection()) + self.assertTrue(connection.isMatrixConnection()) + self.assertFloatEqual(connection.connectionFactor(), well_connection_factors[index]) + self.assertEqual(connection.direction(), WellConnectionDirectionEnum.well_conn_dirX) + + self.assertNotEqual(global_connections[0], global_connections[1]) + self.assertEqual(global_connections[0], global_connections[0]) + + + def test_well_connections_msw(self): + well_info = self.getWellInfo() + + well_name = "X22AYH" + well_time_line = well_info[well_name] + well_state = well_time_line[0] + + segment_ids = [56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, + 103, 104, 105, 106, 107, 108] + + self.assertTrue(well_state.isMultiSegmentWell()) + + self.assertTrue(well_state.hasGlobalConnections()) + global_connections = well_state.globalConnections() + + self.assertEqual(len(global_connections), len(segment_ids)) + + for index, connection in enumerate(global_connections): + assert isinstance(connection, WellConnection) + self.assertTrue(connection.isOpen()) + self.assertTrue(connection.isMultiSegmentWell()) + self.assertEqual(connection.segmentId(), segment_ids[index]) + self.assertFalse(connection.isFractureConnection()) + self.assertTrue(connection.isMatrixConnection()) + self.assertEqual(connection.direction(), WellConnectionDirectionEnum.well_conn_dirY) diff --git a/ThirdParty/Ert/devel/python/test/run_tests.py b/ThirdParty/Ert/devel/python/test/run_tests.py index 0a182c703b..25266ff028 100644 --- a/ThirdParty/Ert/devel/python/test/run_tests.py +++ b/ThirdParty/Ert/devel/python/test/run_tests.py @@ -2,5 +2,7 @@ import sys from ert_tests.run_tests import * +from ert.test import ErtTestRunner + #runTestsInClass("ert_tests.util.test_string_list.StringListTest") -runTestsInClass("ert_tests.run.test_run.RunTest") +ErtTestRunner.runTestsInClass("ert_tests.run.test_run.RunTest") diff --git a/ThirdParty/Ert/devel/python/test/test-data/Statoil b/ThirdParty/Ert/devel/python/test/test-data/Statoil deleted file mode 100644 index 4b6a7527f0..0000000000 --- a/ThirdParty/Ert/devel/python/test/test-data/Statoil +++ /dev/null @@ -1 +0,0 @@ -../../../test-data/Statoil \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/analysis_module.html b/ThirdParty/Ert/devel/share/gui/help/config/analysis/analysis_module.html new file mode 100644 index 0000000000..f0b8207c57 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/analysis/analysis_module.html @@ -0,0 +1 @@ +Select which type of ensemble smoother to use for perform updates \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/iterated_analysis_module.html b/ThirdParty/Ert/devel/share/gui/help/config/analysis/iterated_analysis_module.html new file mode 100644 index 0000000000..adea08022e --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/analysis/iterated_analysis_module.html @@ -0,0 +1 @@ +Select which type of iterated ensemble smoother to use for perform updates \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/update_log.html b/ThirdParty/Ert/devel/share/gui/help/config/analysis/update_log.html deleted file mode 100644 index f46bef4952..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/analysis/update_log.html +++ /dev/null @@ -1 +0,0 @@ -A summary of the data used for updates is stored in this directory. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_generated_by_enkf.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_generated_by_enkf.html deleted file mode 100644 index a010c64de3..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_generated_by_enkf.html +++ /dev/null @@ -1 +0,0 @@ -The name of the file ERT will export the field to when running simulations. Note that there should be an IMPORT statement in the ECLIPSE data file corresponding to the name given here. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_loaded_by_enkf.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_loaded_by_enkf.html deleted file mode 100644 index 8e3d415930..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_file_loaded_by_enkf.html +++ /dev/null @@ -1 +0,0 @@ -This if the name of the file generated by the forward model and read by ERT. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init.html deleted file mode 100644 index cf493e5849..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init.html +++ /dev/null @@ -1 +0,0 @@ -Here you may select a mathematical function to be applied to the field when it is loaded. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init_files.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init_files.html deleted file mode 100644 index 5800ca62c9..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_init_files.html +++ /dev/null @@ -1 +0,0 @@ -The Init files are the filenames (filename with an embedded %d) to load the initial field from. This can be in RMS ROFF format, ECLIPSE restart format or ECLIPSE GRDECL format. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_max.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_max.html deleted file mode 100644 index 5495b9b7f2..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_max.html +++ /dev/null @@ -1 +0,0 @@ -Here you can specify a maximum value for the selected field. This is optional. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min.html deleted file mode 100644 index 0d29b02751..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min.html +++ /dev/null @@ -1 +0,0 @@ -Here you can specify a minimum value for the selected field. This is optional. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min_std.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min_std.html deleted file mode 100644 index f507be8641..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_min_std.html +++ /dev/null @@ -1 +0,0 @@ -A file containing the minimum variance used in post analysis inflation. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_output.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_output.html deleted file mode 100644 index 1d0556fb6c..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_output.html +++ /dev/null @@ -1 +0,0 @@ -Here you may select a mathematical function to be applied to the field before it is exported. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_type.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_type.html deleted file mode 100644 index 25d6eeadde..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/field_type.html +++ /dev/null @@ -1,9 +0,0 @@ -The Fields are parametrizations of quantities which have extent over the full grid. The fields can represent both dynamic properties (e.g pressure or saturations), and static properties (e.g porosity).
-
-
Dynamic: -
The name of a dynamic field must coincide with the name found in the ECLIPSE restart file, e.g PRESSURE. -
Parameter: -
A parameter field represents a static property (e.g porosity or permeability). Here the name can be an arbitrary string. -
General: -
Using a general field, you have fine-grained control over input/output. This is only relevant for advanced features. -
diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_generated_by_enkf.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_generated_by_enkf.html deleted file mode 100644 index 89a2bff031..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_generated_by_enkf.html +++ /dev/null @@ -1 +0,0 @@ -This is the name of the file written by ERT to be read by the forward model. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_loaded_by_enkf.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_loaded_by_enkf.html deleted file mode 100644 index 904aa1dbb8..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_file_loaded_by_enkf.html +++ /dev/null @@ -1 +0,0 @@ -This if the name of the file generated by the forward model and read by ERT (i.e. the RESULT_FILE). diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_init_file_fmt.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_init_file_fmt.html deleted file mode 100644 index a4d87b204b..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_init_file_fmt.html +++ /dev/null @@ -1 +0,0 @@ -Format string with %d of files to load the initial data from. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_min_std.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_min_std.html deleted file mode 100644 index f507be8641..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_min_std.html +++ /dev/null @@ -1 +0,0 @@ -A file containing the minimum variance used in post analysis inflation. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_init.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_init.html deleted file mode 100644 index aec2c1529a..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_init.html +++ /dev/null @@ -1,10 +0,0 @@ -The format of the file written by the forward model (i.e.the RESULT_FILE) and read by ERT. -The alternatives are: -
-
ASCII -
A text file with formatted numbers. -
BINARY_FLOAT -
A vector of binary float numbers. -
BINARY_DOUBLE -
A vector of binary double numbers. -
diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_output.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_output.html deleted file mode 100644 index 7be47c9314..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_param_output.html +++ /dev/null @@ -1,12 +0,0 @@ -The format of the files ERT writes for the forward model. -The alternatives are: -
-
ASCII -
A text file with formatted numbers. -
ASCII_TEMPLATE -
A plain text file with formatted numbers, and an arbitrary header/footer. -
BINARY_FLOAT -
A vector of binary float numbers. -
BINARY_DOUBLE -
A vector of binary double numbers. -
diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_file.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_file.html deleted file mode 100644 index 0b905f4219..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_file.html +++ /dev/null @@ -1 +0,0 @@ -If you use ASCII_TEMPLATE in Output you must also supply a Template file. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_key.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_key.html deleted file mode 100644 index 107b025a6e..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_data_template_key.html +++ /dev/null @@ -1 +0,0 @@ -If you use ASCII_TEMPLATE in Output you must also supply a Template key. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_enkf_outfile.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_enkf_outfile.html deleted file mode 100644 index 09e4d8d0ee..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_enkf_outfile.html +++ /dev/null @@ -1 +0,0 @@ -This is the name of the file ERT creates for each ensemble member based on the Template file. Note that the Include file must be included manually with a statement in the ECLIPSE data file. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_init_files.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_init_files.html deleted file mode 100644 index 4bb33e11ef..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_init_files.html +++ /dev/null @@ -1 +0,0 @@ -Format string with %d of files to load the initial data from. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_min_std.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_min_std.html deleted file mode 100644 index f507be8641..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_min_std.html +++ /dev/null @@ -1 +0,0 @@ -A file containing the minimum variance used in post analysis inflation. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_parameter_file.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_parameter_file.html deleted file mode 100644 index a636adb33f..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_parameter_file.html +++ /dev/null @@ -1 +0,0 @@ -The Parameter file is the input file which defines the names of the parameters you want to estimate, and their initial distribution. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_template.html b/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_template.html deleted file mode 100644 index cdbe60356a..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/gen_kw_template.html +++ /dev/null @@ -1 +0,0 @@ -The Template file contains some parametrized ECLIPSE statements. The file should contain <xxxx>-keywords instead of values. ERT will then for each realization replace the keywords in the Template file with values from the distributions defined in the Parameter file. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/init/history_length.html b/ThirdParty/Ert/devel/share/gui/help/config/init/history_length.html new file mode 100644 index 0000000000..df8285cb42 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/init/history_length.html @@ -0,0 +1 @@ +The timestep of the source case from which the initial values are copied \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_fixed_length_schedule_kw.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_fixed_length_schedule_kw.html new file mode 100644 index 0000000000..d2786f5659 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_fixed_length_schedule_kw.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/add_static_kw.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_static_kw.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/add_static_kw.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/add_static_kw.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_static_kw.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_static_kw.html~HEAD new file mode 100644 index 0000000000..f69dbd13cf --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/add_static_kw.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_copy.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_copy.html new file mode 100644 index 0000000000..4d0e042fef --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_copy.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_enkf_update.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_enkf_update.html new file mode 100644 index 0000000000..580c4dcb7d --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_enkf_update.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_load.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_load.html new file mode 100644 index 0000000000..5e3a647ebc --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_load.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_select.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_select.html new file mode 100644 index 0000000000..bd37b1c6ef --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_select.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_set_var.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_set_var.html new file mode 100644 index 0000000000..66ef1fb449 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_set_var.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_update.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_update.html new file mode 100644 index 0000000000..2667d60c1c --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/analysis_update.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/case_table.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/case_table.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/case_table.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/case_table.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/config_help.py b/ThirdParty/Ert/devel/share/gui/help/config/keywords/config_help.py new file mode 100644 index 0000000000..079efe92f3 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/config_help.py @@ -0,0 +1,12 @@ +#!/prog/sdpsoft/python2.6.7/bin/python + + +f= open('keywords.txt', "r") +for line in f: + tokens=line.split() + fname = tokens[0]+".html" + href = "Click here to view help on the wiki page." + file= open(fname, "w") + file.write (href) + file.close() +f.close() \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/create_case.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/create_case.html new file mode 100644 index 0000000000..363483fc44 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/create_case.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/data_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_file.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/data_file.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/data_file.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_file.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_file.html~HEAD new file mode 100644 index 0000000000..67263b1346 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_file.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/data_kw.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_kw.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/data_kw.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/data_kw.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_kw.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_kw.html~HEAD new file mode 100644 index 0000000000..e21da1043e --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_kw.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_ranking.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_ranking.html new file mode 100644 index 0000000000..7d171050bf --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/data_ranking.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/define.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/define.html new file mode 100644 index 0000000000..4721ab3a19 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/define.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/delete_runpath.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/delete_runpath.html new file mode 100644 index 0000000000..a5557b5943 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/delete_runpath.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/eclbase.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/eclbase.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/eclbase.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/eclbase.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/eclbase.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/eclbase.html~HEAD new file mode 100644 index 0000000000..a15ca207e0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/eclbase.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/end_date.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/end_date.html new file mode 100644 index 0000000000..e8b0961967 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/end_date.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_alpha.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_alpha.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_alpha.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_alpha.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_alpha.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_alpha.html~HEAD new file mode 100644 index 0000000000..b5c5becbca --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_alpha.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_bootstrap.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_bootstrap.html new file mode 100644 index 0000000000..aaac93ede6 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_bootstrap.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_cv_folds.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_cv_folds.html new file mode 100644 index 0000000000..41946518ad --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_cv_folds.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_force_ncomp.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_force_ncomp.html new file mode 100644 index 0000000000..9a55eeb2f0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_force_ncomp.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_local_cv.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_local_cv.html new file mode 100644 index 0000000000..e0d8eb8719 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_local_cv.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_merge_observations.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_merge_observations.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_merge_observations.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_merge_observations.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_merge_observations.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_merge_observations.html~HEAD new file mode 100644 index 0000000000..43efa8bd55 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_merge_observations.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_mode.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_mode.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_mode.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_mode.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_mode.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_mode.html~HEAD new file mode 100644 index 0000000000..e119f6ee21 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_mode.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_ncomp.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_ncomp.html new file mode 100644 index 0000000000..f62fbaa777 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_ncomp.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_pen_press.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_pen_press.html new file mode 100644 index 0000000000..f172c3ccbf --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_pen_press.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_rerun.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_rerun.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_rerun.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_rerun.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_rerun.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_rerun.html~HEAD new file mode 100644 index 0000000000..9913097265 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_rerun.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_scaling.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_scaling.html new file mode 100644 index 0000000000..f0b940597c --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_scaling.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_sched_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_sched_file.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_sched_file.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_sched_file.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_sched_file.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_sched_file.html~HEAD new file mode 100644 index 0000000000..9c7e1d7e88 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_sched_file.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_truncation.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_truncation.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/enkf_truncation.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_truncation.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_truncation.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_truncation.html~HEAD new file mode 100644 index 0000000000..f433135ed0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/enkf_truncation.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/ensemble_run.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/ensemble_run.html new file mode 100644 index 0000000000..7132b849cc --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/ensemble_run.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/enspath.html 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http://ert.nr.no/wiki/index.php/Creating_a_configuration_file_for_ERT#SETENV +update_path http://ert.nr.no/wiki/index.php/Creating_a_configuration_file_for_ERT#UPDATE_PATH \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/license_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/license_path.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/license_path.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/license_path.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results.html new file mode 100644 index 0000000000..1510767b99 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results_iter.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results_iter.html new file mode 100644 index 0000000000..04d868798c --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/load_results_iter.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/local_config.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/local_config.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/local_config.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/local_config.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/log_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/log_file.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/systemenv/log_file.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/log_file.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/log_level.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/log_level.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/systemenv/log_level.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/log_level.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/lsf_queue.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_queue.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/lsf_queue.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_queue.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_queue.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_queue.html~HEAD new file mode 100644 index 0000000000..9a294d649f --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_queue.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/lsf_resources.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_resources.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/lsf_resources.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_resources.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_server.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_server.html new file mode 100644 index 0000000000..bc158ce4c1 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/lsf_server.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/max_resample.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_resample.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/max_resample.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/max_resample.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_local.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_local.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_local.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_local.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_local.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_local.html~HEAD new file mode 100644 index 0000000000..fc4f5d6c5e --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_local.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_lsf.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_lsf.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_lsf.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_lsf.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_lsf.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_lsf.html~HEAD new file mode 100644 index 0000000000..5ac5df8bb4 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_lsf.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_rsh.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_rsh.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/max_running_rsh.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_rsh.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_rsh.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_rsh.html~HEAD new file mode 100644 index 0000000000..c219d781eb --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_running_rsh.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_runtime.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_runtime.html new file mode 100644 index 0000000000..749e5b5437 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_runtime.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/max_submit.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/max_submit.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/max_submit.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/max_submit.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/min_realizations.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/min_realizations.html new file mode 100644 index 0000000000..a3ddc94425 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/min_realizations.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/ensemble/num_realizations.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/num_realizations.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/ensemble/num_realizations.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/num_realizations.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/num_realizations.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/num_realizations.html~HEAD new file mode 100644 index 0000000000..3314abdc98 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/num_realizations.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/observations/obs_config.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/obs_config.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/observations/obs_config.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/obs_config.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/obs_config.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/obs_config.html~HEAD new file mode 100644 index 0000000000..58b2087624 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/obs_config.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/observation_ranking.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/observation_ranking.html new file mode 100644 index 0000000000..1cce3fd21f --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/observation_ranking.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/plot/plot_driver.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_driver.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/plot/plot_driver.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_driver.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_driver.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_driver.html~HEAD new file mode 100644 index 0000000000..8d596aa2bf --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_driver.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar.html new file mode 100644 index 0000000000..8dc1f04c64 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/plot/plot_errorbar_max.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar_max.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/plot/plot_errorbar_max.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar_max.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar_max.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar_max.html~HEAD new file mode 100644 index 0000000000..11d2e0d3a0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_errorbar_max.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/plot/plot_height.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_height.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/plot/plot_height.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_height.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_height.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_height.html~HEAD new file mode 100644 index 0000000000..7e8e70a614 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_height.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/plot/path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_path.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/plot/path.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_path.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_path.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_path.html~HEAD new file mode 100644 index 0000000000..88ba65eb41 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_path.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_refcase.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_refcase.html new file mode 100644 index 0000000000..8d20e136b0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_refcase.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/plot/width.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_width.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/plot/width.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_width.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_width.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_width.html~HEAD new file mode 100644 index 0000000000..26cc77a710 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/plot_width.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/pre_clear_runpath.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/pre_clear_runpath.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/pre_clear_runpath.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/pre_clear_runpath.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_path.html new file mode 100644 index 0000000000..b291a46a71 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_path.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_workflow.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_workflow.html new file mode 100644 index 0000000000..38901e8394 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/qc_workflow.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/queue_system.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html similarity index 66% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/queue_system.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html index 761e2309e3..e06952bf8b 100644 --- a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/queue_system.html +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html @@ -4,3 +4,5 @@
RSH: Submits the jobs to a defined set of workstations.
LOCAL: Submits the jobs to your local workstation. +
+More information in the wiki. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html~HEAD new file mode 100644 index 0000000000..99018f9949 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/queue_system.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/refcase.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/refcase.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase.html~HEAD new file mode 100644 index 0000000000..08d1a76fb5 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase_list.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase_list.html new file mode 100644 index 0000000000..37b3d471f3 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/refcase_list.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_context.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_context.html new file mode 100644 index 0000000000..332754b50b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_context.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_group_list.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_group_list.html new file mode 100644 index 0000000000..e253eb0ef7 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_group_list.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_list.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_list.html new file mode 100644 index 0000000000..512e8cdd08 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_list.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_path.html new file mode 100644 index 0000000000..711aa8c825 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_path.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_search_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_search_path.html new file mode 100644 index 0000000000..c7c0ac1f5d --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_search_path.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_well_list.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_well_list.html new file mode 100644 index 0000000000..e8579adc7b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/report_well_list.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/analysis/rerun_start.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rerun_start.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/analysis/rerun_start.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/rerun_start.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/result_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/result_path.html new file mode 100644 index 0000000000..242f708267 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/result_path.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/rft_config.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rft_config.html new file mode 100644 index 0000000000..c5f8cc80dc --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rft_config.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/rftpath.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rftpath.html new file mode 100644 index 0000000000..863dec10b9 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rftpath.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/rsh_command.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_command.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/rsh_command.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_command.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_command.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_command.html~HEAD new file mode 100644 index 0000000000..5b4b606c61 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_command.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/queue_system/rsh_host_list.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_host.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/queue_system/rsh_host_list.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_host.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_host.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_host.html~HEAD new file mode 100644 index 0000000000..49ba3b46a4 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/rsh_host.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother.html new file mode 100644 index 0000000000..305fc0b1d2 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother_with_iter.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother_with_iter.html new file mode 100644 index 0000000000..14d805f1a9 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_smoother_with_iter.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/run_template.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/run_template.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/runpath.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/simulation/runpath.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath.html~HEAD new file mode 100644 index 0000000000..89303eaa37 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath_file.html new file mode 100644 index 0000000000..2e83b4513f --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/runpath_file.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/schedule_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_file.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/schedule_file.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_file.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_file.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_file.html~HEAD new file mode 100644 index 0000000000..8d94d5d2ab --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_file.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/eclipse/schedule_prediction_file.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_prediction_file.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/eclipse/schedule_prediction_file.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_prediction_file.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_prediction_file.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_prediction_file.html~HEAD new file mode 100644 index 0000000000..0f3c2a29ac --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/schedule_prediction_file.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/select_case.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/select_case.html new file mode 100644 index 0000000000..877772b866 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/select_case.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/setenv.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/setenv.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/systemenv/setenv.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/setenv.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/setenv.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/setenv.html~HEAD new file mode 100644 index 0000000000..aaa34ca9ae --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/setenv.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/stop_long_running.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/stop_long_running.html new file mode 100644 index 0000000000..4bc741bf20 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/stop_long_running.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/summary.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/summary.html new file mode 100644 index 0000000000..f4cf208cce --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/summary.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/surface.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/surface.html new file mode 100644 index 0000000000..9ea333c494 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/surface.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_log_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_log_path.html new file mode 100644 index 0000000000..af497a446a --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_log_path.html @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/update_path.html b/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_path.html similarity index 100% rename from ThirdParty/Ert/devel/share/gui/help/config/systemenv/update_path.html rename to ThirdParty/Ert/devel/share/gui/help/config/keywords/update_path.html diff --git a/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_path.html~HEAD b/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_path.html~HEAD new file mode 100644 index 0000000000..0763a2e9f1 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/keywords/update_path.html~HEAD @@ -0,0 +1 @@ +Click here to view help on the wiki page. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/run/runpath.html b/ThirdParty/Ert/devel/share/gui/help/config/run/runpath.html new file mode 100644 index 0000000000..36685bc466 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/run/runpath.html @@ -0,0 +1,3 @@ +basic runpath info + +Click here diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/active_realizations.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/active_realizations.html new file mode 100644 index 0000000000..adff4f4ce7 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/active_realizations.html @@ -0,0 +1 @@ +These are the realizations that will be used to perform simulations. For example, if "Number of realizations:50 and Active realizations is 0-9", then only realizations 0,1,2,3,...,9 will be used to perform simulations while realizations 10,11, 12,...,49 will be excluded. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/analysis_module.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/analysis_module.html new file mode 100644 index 0000000000..a0597c4844 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/analysis_module.html @@ -0,0 +1 @@ +For running sensitivies you can give the cases descriptive names. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/forward_model_arguments.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/forward_model_arguments.html deleted file mode 100644 index 7c5489fc46..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/simulation/forward_model_arguments.html +++ /dev/null @@ -1 +0,0 @@ -Specify here if you have special requirements to a job. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/iterated_target_case_format.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/iterated_target_case_format.html new file mode 100644 index 0000000000..de622b8418 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/iterated_target_case_format.html @@ -0,0 +1 @@ +The "Iterated Ensemble Smoother" creates multiple cases for the different iterations. The case names will follow the specified format. For example, "Target case format: iter_%d" will generate cases with the names iter_0, iter_1, iter_2, iter_3, .... \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/number_of_iterations.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/number_of_iterations.html new file mode 100644 index 0000000000..5d649052ff --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/number_of_iterations.html @@ -0,0 +1 @@ +Specify the number of times to perform updates/iterations. In general, the more updates the better, however, this could be time consuming. The default value is 4. \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_arguments.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_arguments.html deleted file mode 100644 index 0eeae20d74..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_arguments.html +++ /dev/null @@ -1 +0,0 @@ -config/simulation/run_template_arguments \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_file.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_file.html deleted file mode 100644 index 8e00b6f926..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_file.html +++ /dev/null @@ -1 +0,0 @@ -config/simulation/run_template_file \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_target.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_target.html deleted file mode 100644 index 0f37aa3f7f..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/simulation/run_template_target.html +++ /dev/null @@ -1 +0,0 @@ -config/simulation/run_template_target \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/runpath_retain.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/runpath_retain.html deleted file mode 100644 index da232ecd8d..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/simulation/runpath_retain.html +++ /dev/null @@ -1,3 +0,0 @@ -When the ERT application is running it creates directories for the ECLIPSE simulations, one for each realization. Here you can choose which of these realization directories to keep and which to delete. -
-Note that if you are using the ERT application to run the EnKF algorithm (i.e. EnKF assimilation), the default behavior is to delete these directories after the simulation results have been internalized. When running the ERT application as a convenient way to start many simulations (i.e. Ensemble experiment), the default behavior is to keep these directories. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_constant_value.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_constant_value.html new file mode 100644 index 0000000000..792bce12bb --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_constant_value.html @@ -0,0 +1 @@ +Constant value used when the parameter is kept constant in the sensitivity study. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_is_included.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_is_included.html new file mode 100644 index 0000000000..549294c6e8 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_parameter_is_included.html @@ -0,0 +1 @@ +Check this box if you want the parameter to be included in the sensitivity study. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_target_case_format.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_target_case_format.html new file mode 100644 index 0000000000..b602cba8dd --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/sensitivity_target_case_format.html @@ -0,0 +1 @@ +The "Sensitivity Study" creates a case for each parameter that is tested. The case names will follow the specified format. For example, "Target case format: iter_%s" and parameter name trans_mult will generate cases with the names iter_trans_mult. diff --git a/ThirdParty/Ert/devel/share/gui/help/config/simulation/target_case.html b/ThirdParty/Ert/devel/share/gui/help/config/simulation/target_case.html new file mode 100644 index 0000000000..b3f6cb2063 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/config/simulation/target_case.html @@ -0,0 +1 @@ +This is the name of the case where the results for the updated parameters will be stored \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_arglist.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_arglist.html deleted file mode 100644 index 89c008eb77..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_arglist.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_arglist \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_env.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_env.html deleted file mode 100644 index 53a97cc5b3..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_env.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_env \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_executable.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_executable.html deleted file mode 100644 index 5ef3eef583..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_executable.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_executable \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_lsf_resources.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_lsf_resources.html deleted file mode 100644 index bf41a70954..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_lsf_resources.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_lsf_resources \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running.html deleted file mode 100644 index d426da6059..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_max_running \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running_minutes.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running_minutes.html deleted file mode 100644 index cdfd31142a..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_max_running_minutes.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_max_running_minutes \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_path.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_path.html deleted file mode 100644 index f02864800b..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_path.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_path \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stderr.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stderr.html deleted file mode 100644 index 23ed91a268..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stderr.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_stderr \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdin.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdin.html deleted file mode 100644 index 5fab08aac5..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdin.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_stdin \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdout.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdout.html deleted file mode 100644 index 24226afb35..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_stdout.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_stdout \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_target_file.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_target_file.html deleted file mode 100644 index 0666dbe7a6..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_job_target_file.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_job_target_file \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_jobs.html b/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_jobs.html deleted file mode 100644 index 983273d895..0000000000 --- a/ThirdParty/Ert/devel/share/gui/help/config/systemenv/install_jobs.html +++ /dev/null @@ -1 +0,0 @@ -config/systemenv/install_jobs \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_existing.html b/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_existing.html new file mode 100644 index 0000000000..c05dccad1b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_existing.html @@ -0,0 +1 @@ +Click on this button to perform the initialization process \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_scratch.html b/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_scratch.html new file mode 100644 index 0000000000..c05dccad1b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/initialize_from_scratch.html @@ -0,0 +1 @@ +Click on this button to perform the initialization process \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/select_case_for_info.html b/ThirdParty/Ert/devel/share/gui/help/init/select_case_for_info.html new file mode 100644 index 0000000000..f27d05c573 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/select_case_for_info.html @@ -0,0 +1 @@ +The case you want to view information on \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/select_members.html b/ThirdParty/Ert/devel/share/gui/help/init/select_members.html new file mode 100644 index 0000000000..616ac700be --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/select_members.html @@ -0,0 +1 @@ +Select which members of realizations to initialize \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/select_parameters.html b/ThirdParty/Ert/devel/share/gui/help/init/select_parameters.html new file mode 100644 index 0000000000..ddb2f22741 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/select_parameters.html @@ -0,0 +1 @@ +Select which parameters you want to initialize \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/selected_case_info.html b/ThirdParty/Ert/devel/share/gui/help/init/selected_case_info.html new file mode 100644 index 0000000000..ba7763102b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/selected_case_info.html @@ -0,0 +1 @@ +Information for the selected case \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/init/source_case.html b/ThirdParty/Ert/devel/share/gui/help/init/source_case.html new file mode 100644 index 0000000000..5eec505e79 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/init/source_case.html @@ -0,0 +1 @@ +The case from which the initial values are copied \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/help/run/simulation_mode.html b/ThirdParty/Ert/devel/share/gui/help/run/simulation_mode.html new file mode 100644 index 0000000000..3be738a9b6 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/run/simulation_mode.html @@ -0,0 +1,4 @@ +Here you can select which type of simulation to run.
+1. Ensemble Experiment: this will run simulations without performing any updates on the parameters.
+2. Ensemble Smoother: this will run simulations while performing one update on the parameters by using the ensemble smoother algorithm.
+3. Iterated Ensemble Smoother: this will run simulations while performing multiple updates on the parameters by using the iterated ensemble smoother algorithm. diff --git a/ThirdParty/Ert/devel/share/gui/help/run/start_simulation.html b/ThirdParty/Ert/devel/share/gui/help/run/start_simulation.html new file mode 100644 index 0000000000..cd0892535e --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/run/start_simulation.html @@ -0,0 +1 @@ +Click on this button to start running simulations diff --git a/ThirdParty/Ert/devel/share/gui/help/run/workflow.html b/ThirdParty/Ert/devel/share/gui/help/run/workflow.html new file mode 100644 index 0000000000..986b0130b1 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/run/workflow.html @@ -0,0 +1 @@ +Select the workflow to run diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/export.html b/ThirdParty/Ert/devel/share/gui/help/tools/export.html new file mode 100644 index 0000000000..5a3f2061d7 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/export.html @@ -0,0 +1 @@ +This will open the "Export Data to Other Formats" dialog window where you can export data stored in ERT to formats usable by other applications diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/help.html b/ThirdParty/Ert/devel/share/gui/help/tools/help.html new file mode 100644 index 0000000000..ecbb174173 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/help.html @@ -0,0 +1 @@ +This will open the "Help" window where help information are displayed for various functionality diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/ide.html b/ThirdParty/Ert/devel/share/gui/help/tools/ide.html new file mode 100644 index 0000000000..c04f7eca8b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/ide.html @@ -0,0 +1 @@ +This will open the "Configuration" dialog window where you can set the values for various keywords and parameters in ERT diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/manage_cases.html b/ThirdParty/Ert/devel/share/gui/help/tools/manage_cases.html new file mode 100644 index 0000000000..6420f762a1 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/manage_cases.html @@ -0,0 +1 @@ +This will open the "Manage Cases" dialog window where you can create, delete, and initialize cases diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/plot.html b/ThirdParty/Ert/devel/share/gui/help/tools/plot.html new file mode 100644 index 0000000000..5110a84c4d --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/plot.html @@ -0,0 +1 @@ +This will open the "Plotting" page where you can view the plot profiles for various data types diff --git a/ThirdParty/Ert/devel/share/gui/help/tools/workflows.html b/ThirdParty/Ert/devel/share/gui/help/tools/workflows.html new file mode 100644 index 0000000000..dcf597397b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/help/tools/workflows.html @@ -0,0 +1 @@ +This will 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+ + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/gen_kw.html b/ThirdParty/Ert/devel/share/gui/plots/gen_kw.html new file mode 100644 index 0000000000..b705a1867f --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/gen_kw.html @@ -0,0 +1,144 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/histogram.html b/ThirdParty/Ert/devel/share/gui/plots/histogram.html new file mode 100644 index 0000000000..a414542cbc --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/histogram.html @@ -0,0 +1,307 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.js b/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.js index d35f274b68..b0cb637255 100644 --- a/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.js +++ b/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.js @@ -1,6 +1,6 @@ -d3 = function() { +!function() { var d3 = { - version: "3.3.6" + version: "3.4.1" }; if (!Date.now) Date.now = function() { return +new Date(); @@ -186,8 +186,19 @@ d3 = function() { return entries; }; d3.merge = function(arrays) { - return Array.prototype.concat.apply([], arrays); + var n = arrays.length, m, i = -1, j = 0, merged, array; + while (++i < n) j += arrays[i].length; + merged = new Array(j); + while (--n >= 0) { + array = arrays[n]; + m = array.length; + while (--m >= 0) { + merged[--j] = array[m]; + } + } + return merged; }; + var abs = Math.abs; d3.range = function(start, stop, step) { if (arguments.length < 3) { step = 1; @@ -197,7 +208,7 @@ d3 = function() { } } if ((stop - start) / step === Infinity) throw new Error("infinite range"); - var range = [], k = d3_range_integerScale(Math.abs(step)), i = -1, j; + var range = [], k = d3_range_integerScale(abs(step)), i = -1, j; start *= k, stop *= k, step *= k; if (step < 0) while ((j = start + step * ++i) > stop) range.push(j / k); else while ((j = start + step * ++i) < stop) range.push(j / k); return range; @@ -228,26 +239,15 @@ d3 = function() { }; function d3_Map() {} d3_class(d3_Map, { - has: function(key) { - return d3_map_prefix + key in this; - }, + has: d3_map_has, get: function(key) { return this[d3_map_prefix + key]; }, set: function(key, value) { return this[d3_map_prefix + key] = value; }, - remove: function(key) { - key = d3_map_prefix + key; - return key in this && delete this[key]; - }, - keys: function() { - var keys = []; - this.forEach(function(key) { - keys.push(key); - }); - return keys; - }, + remove: d3_map_remove, + keys: d3_map_keys, values: function() { var values = []; this.forEach(function(key, value) { @@ -265,15 +265,36 @@ d3 = function() { }); return entries; }, + size: d3_map_size, + empty: d3_map_empty, forEach: function(f) { - for (var key in this) { - if (key.charCodeAt(0) === d3_map_prefixCode) { - f.call(this, key.substring(1), this[key]); - } - } + for (var key in this) if (key.charCodeAt(0) === d3_map_prefixCode) f.call(this, key.substring(1), this[key]); } }); var d3_map_prefix = "\x00", d3_map_prefixCode = d3_map_prefix.charCodeAt(0); + function d3_map_has(key) { + return d3_map_prefix + key in this; + } + function d3_map_remove(key) { + key = d3_map_prefix + key; + return key in this && delete this[key]; + } + function d3_map_keys() { + var keys = []; + this.forEach(function(key) { + keys.push(key); + }); + return keys; + } + function d3_map_size() { + var size = 0; + for (var key in this) if (key.charCodeAt(0) === d3_map_prefixCode) ++size; + return size; + } + function d3_map_empty() { + for (var key in this) if (key.charCodeAt(0) === d3_map_prefixCode) return false; + return true; + } d3.nest = function() { var nest = {}, keys = [], sortKeys = [], sortValues, rollup; function map(mapType, array, depth) { @@ -344,9 +365,7 @@ d3 = function() { }; function d3_Set() {} d3_class(d3_Set, { - has: function(value) { - return d3_map_prefix + value in this; - }, + has: d3_map_has, add: function(value) { this[d3_map_prefix + value] = true; return value; @@ -355,19 +374,11 @@ d3 = function() { value = d3_map_prefix + value; return value in this && delete this[value]; }, - values: function() { - var values = []; - this.forEach(function(value) { - values.push(value); - }); - return values; - }, + values: d3_map_keys, + size: d3_map_size, + empty: d3_map_empty, forEach: function(f) { - for (var value in this) { - if (value.charCodeAt(0) === d3_map_prefixCode) { - f.call(this, value.substring(1)); - } - } + for (var value in this) if (value.charCodeAt(0) === d3_map_prefixCode) f.call(this, value.substring(1)); } }); d3.behavior = {}; @@ -596,7 +607,7 @@ d3 = function() { d3_selectionPrototype.classed = function(name, value) { if (arguments.length < 2) { if (typeof name === "string") { - var node = this.node(), n = (name = name.trim().split(/^|\s+/g)).length, i = -1; + var node = this.node(), n = (name = d3_selection_classes(name)).length, i = -1; if (value = node.classList) { while (++i < n) if (!value.contains(name[i])) return false; } else { @@ -613,8 +624,11 @@ d3 = function() { function d3_selection_classedRe(name) { return new RegExp("(?:^|\\s+)" + d3.requote(name) + "(?:\\s+|$)", "g"); } + function d3_selection_classes(name) { + return name.trim().split(/^|\s+/); + } function d3_selection_classed(name, value) { - name = name.trim().split(/\s+/).map(d3_selection_classedName); + name = d3_selection_classes(name).map(d3_selection_classedName); var n = name.length; function classedConstant() { var i = -1; @@ -714,16 +728,16 @@ d3 = function() { }; function d3_selection_creator(name) { return typeof name === "function" ? name : (name = d3.ns.qualify(name)).local ? function() { - return d3_document.createElementNS(name.space, name.local); + return this.ownerDocument.createElementNS(name.space, name.local); } : function() { - return d3_document.createElementNS(this.namespaceURI, name); + return this.ownerDocument.createElementNS(this.namespaceURI, name); }; } d3_selectionPrototype.insert = function(name, before) { name = d3_selection_creator(name); before = d3_selection_selector(before); return this.select(function() { - return this.insertBefore(name.apply(this, arguments), before.apply(this, arguments)); + return this.insertBefore(name.apply(this, arguments), before.apply(this, arguments) || null); }); }; d3_selectionPrototype.remove = function() { @@ -829,7 +843,7 @@ d3 = function() { subgroups.push(subgroup = []); subgroup.parentNode = (group = this[j]).parentNode; for (var i = 0, n = group.length; i < n; i++) { - if ((node = group[i]) && filter.call(node, node.__data__, i)) { + if ((node = group[i]) && filter.call(node, node.__data__, i, j)) { subgroup.push(node); } } @@ -1048,13 +1062,16 @@ d3 = function() { } }; } - var d3_event_dragSelect = d3_vendorSymbol(d3_documentElement.style, "userSelect"), d3_event_dragId = 0; + var d3_event_dragSelect = "onselectstart" in d3_document ? null : d3_vendorSymbol(d3_documentElement.style, "userSelect"), d3_event_dragId = 0; function d3_event_dragSuppress() { - var name = ".dragsuppress-" + ++d3_event_dragId, touchmove = "touchmove" + name, selectstart = "selectstart" + name, dragstart = "dragstart" + name, click = "click" + name, w = d3.select(d3_window).on(touchmove, d3_eventPreventDefault).on(selectstart, d3_eventPreventDefault).on(dragstart, d3_eventPreventDefault), style = d3_documentElement.style, select = style[d3_event_dragSelect]; - style[d3_event_dragSelect] = "none"; + var name = ".dragsuppress-" + ++d3_event_dragId, click = "click" + name, w = d3.select(d3_window).on("touchmove" + name, d3_eventPreventDefault).on("dragstart" + name, d3_eventPreventDefault).on("selectstart" + name, d3_eventPreventDefault); + if (d3_event_dragSelect) { + var style = d3_documentElement.style, select = style[d3_event_dragSelect]; + style[d3_event_dragSelect] = "none"; + } return function(suppressClick) { w.on(name, null); - style[d3_event_dragSelect] = select; + if (d3_event_dragSelect) style[d3_event_dragSelect] = select; if (suppressClick) { function off() { w.on(click, null); @@ -1162,6 +1179,9 @@ d3 = function() { function d3_sgn(x) { return x > 0 ? 1 : x < 0 ? -1 : 0; } + function d3_cross2d(a, b, c) { + return (b[0] - a[0]) * (c[1] - a[1]) - (b[1] - a[1]) * (c[0] - a[0]); + } function d3_acos(x) { return x > 1 ? 0 : x < -1 ? Ï€ : Math.acos(x); } @@ -1923,11 +1943,11 @@ d3 = function() { var reFormat = new RegExp('["' + delimiter + "\n]"), delimiterCode = delimiter.charCodeAt(0); function dsv(url, row, callback) { if (arguments.length < 3) callback = row, row = null; - var xhr = d3.xhr(url, mimeType, callback); + var xhr = d3_xhr(url, mimeType, row == null ? response : typedResponse(row), callback); xhr.row = function(_) { return arguments.length ? xhr.response((row = _) == null ? response : typedResponse(_)) : row; }; - return xhr.row(row); + return xhr; } function response(request) { return dsv.parse(request.responseText); @@ -2031,11 +2051,12 @@ d3 = function() { if (n < 2) delay = 0; if (n < 3) then = Date.now(); var time = then + delay, timer = { - callback: callback, - time: time, - next: null + c: callback, + t: time, + f: false, + n: null }; - if (d3_timer_queueTail) d3_timer_queueTail.next = timer; else d3_timer_queueHead = timer; + if (d3_timer_queueTail) d3_timer_queueTail.n = timer; else d3_timer_queueHead = timer; d3_timer_queueTail = timer; if (!d3_timer_interval) { d3_timer_timeout = clearTimeout(d3_timer_timeout); @@ -2060,36 +2081,34 @@ d3 = function() { d3_timer_mark(); d3_timer_sweep(); }; - function d3_timer_replace(callback, delay, then) { - var n = arguments.length; - if (n < 2) delay = 0; - if (n < 3) then = Date.now(); - d3_timer_active.callback = callback; - d3_timer_active.time = then + delay; - } function d3_timer_mark() { var now = Date.now(); d3_timer_active = d3_timer_queueHead; while (d3_timer_active) { - if (now >= d3_timer_active.time) d3_timer_active.flush = d3_timer_active.callback(now - d3_timer_active.time); - d3_timer_active = d3_timer_active.next; + if (now >= d3_timer_active.t) d3_timer_active.f = d3_timer_active.c(now - d3_timer_active.t); + d3_timer_active = d3_timer_active.n; } return now; } function d3_timer_sweep() { var t0, t1 = d3_timer_queueHead, time = Infinity; while (t1) { - if (t1.flush) { - t1 = t0 ? t0.next = t1.next : d3_timer_queueHead = t1.next; + if (t1.f) { + t1 = t0 ? t0.n = t1.n : d3_timer_queueHead = t1.n; } else { - if (t1.time < time) time = t1.time; - t1 = (t0 = t1).next; + if (t1.t < time) time = t1.t; + t1 = (t0 = t1).n; } } d3_timer_queueTail = t0; return time; } - var d3_format_decimalPoint = ".", d3_format_thousandsSeparator = ",", d3_format_grouping = [ 3, 3 ], d3_format_currencySymbol = "$"; + function d3_format_precision(x, p) { + return p - (x ? Math.ceil(Math.log(x) / Math.LN10) : 1); + } + d3.round = function(x, n) { + return n ? Math.round(x * (n = Math.pow(10, n))) / n : Math.round(x); + }; var d3_formatPrefixes = [ "y", "z", "a", "f", "p", "n", "µ", "m", "", "k", "M", "G", "T", "P", "E", "Z", "Y" ].map(d3_formatPrefix); d3.formatPrefix = function(value, precision) { var i = 0; @@ -2102,7 +2121,7 @@ d3 = function() { return d3_formatPrefixes[8 + i / 3]; }; function d3_formatPrefix(d, i) { - var k = Math.pow(10, Math.abs(8 - i) * 3); + var k = Math.pow(10, abs(8 - i) * 3); return { scale: i > 8 ? function(d) { return d / k; @@ -2112,79 +2131,86 @@ d3 = function() { symbol: d }; } - d3.round = function(x, n) { - return n ? Math.round(x * (n = Math.pow(10, n))) / n : Math.round(x); - }; - d3.format = function(specifier) { - var match = d3_format_re.exec(specifier), fill = match[1] || " ", align = match[2] || ">", sign = match[3] || "", symbol = match[4] || "", zfill = match[5], width = +match[6], comma = match[7], precision = match[8], type = match[9], scale = 1, suffix = "", integer = false; - if (precision) precision = +precision.substring(1); - if (zfill || fill === "0" && align === "=") { - zfill = fill = "0"; - align = "="; - if (comma) width -= Math.floor((width - 1) / 4); - } - switch (type) { - case "n": - comma = true; - type = "g"; - break; + function d3_locale_numberFormat(locale) { + var locale_decimal = locale.decimal, locale_thousands = locale.thousands, locale_grouping = locale.grouping, locale_currency = locale.currency, formatGroup = locale_grouping ? function(value) { + var i = value.length, t = [], j = 0, g = locale_grouping[0]; + while (i > 0 && g > 0) { + t.push(value.substring(i -= g, i + g)); + g = locale_grouping[j = (j + 1) % locale_grouping.length]; + } + return t.reverse().join(locale_thousands); + } : d3_identity; + return function(specifier) { + var match = d3_format_re.exec(specifier), fill = match[1] || " ", align = match[2] || ">", sign = match[3] || "", symbol = match[4] || "", zfill = match[5], width = +match[6], comma = match[7], precision = match[8], type = match[9], scale = 1, prefix = "", suffix = "", integer = false; + if (precision) precision = +precision.substring(1); + if (zfill || fill === "0" && align === "=") { + zfill = fill = "0"; + align = "="; + if (comma) width -= Math.floor((width - 1) / 4); + } + switch (type) { + case "n": + comma = true; + type = "g"; + break; - case "%": - scale = 100; - suffix = "%"; - type = "f"; - break; + case "%": + scale = 100; + suffix = "%"; + type = "f"; + break; - case "p": - scale = 100; - suffix = "%"; - type = "r"; - break; + case "p": + scale = 100; + suffix = "%"; + type = "r"; + break; - case "b": - case "o": - case "x": - case "X": - if (symbol === "#") symbol = "0" + type.toLowerCase(); + case "b": + case "o": + case "x": + case "X": + if (symbol === "#") prefix = "0" + type.toLowerCase(); - case "c": - case "d": - integer = true; - precision = 0; - break; + case "c": + case "d": + integer = true; + precision = 0; + break; - case "s": - scale = -1; - type = "r"; - break; - } - if (symbol === "#") symbol = ""; else if (symbol === "$") symbol = d3_format_currencySymbol; - if (type == "r" && !precision) type = "g"; - if (precision != null) { - if (type == "g") precision = Math.max(1, Math.min(21, precision)); else if (type == "e" || type == "f") precision = Math.max(0, Math.min(20, precision)); - } - type = d3_format_types.get(type) || d3_format_typeDefault; - var zcomma = zfill && comma; - return function(value) { - if (integer && value % 1) return ""; - var negative = value < 0 || value === 0 && 1 / value < 0 ? (value = -value, "-") : sign; - if (scale < 0) { - var prefix = d3.formatPrefix(value, precision); - value = prefix.scale(value); - suffix = prefix.symbol; - } else { - value *= scale; + case "s": + scale = -1; + type = "r"; + break; } - value = type(value, precision); - var i = value.lastIndexOf("."), before = i < 0 ? value : value.substring(0, i), after = i < 0 ? "" : d3_format_decimalPoint + value.substring(i + 1); - if (!zfill && comma) before = d3_format_group(before); - var length = symbol.length + before.length + after.length + (zcomma ? 0 : negative.length), padding = length < width ? new Array(length = width - length + 1).join(fill) : ""; - if (zcomma) before = d3_format_group(padding + before); - negative += symbol; - value = before + after; - return (align === "<" ? negative + value + padding : align === ">" ? padding + negative + value : align === "^" ? padding.substring(0, length >>= 1) + negative + value + padding.substring(length) : negative + (zcomma ? value : padding + value)) + suffix; + if (symbol === "$") prefix = locale_currency[0], suffix = locale_currency[1]; + if (type == "r" && !precision) type = "g"; + if (precision != null) { + if (type == "g") precision = Math.max(1, Math.min(21, precision)); else if (type == "e" || type == "f") precision = Math.max(0, Math.min(20, precision)); + } + type = d3_format_types.get(type) || d3_format_typeDefault; + var zcomma = zfill && comma; + return function(value) { + if (integer && value % 1) return ""; + var negative = value < 0 || value === 0 && 1 / value < 0 ? (value = -value, "-") : sign; + if (scale < 0) { + var unit = d3.formatPrefix(value, precision); + value = unit.scale(value); + suffix = unit.symbol; + } else { + value *= scale; + } + value = type(value, precision); + var i = value.lastIndexOf("."), before = i < 0 ? value : value.substring(0, i), after = i < 0 ? "" : locale_decimal + value.substring(i + 1); + if (!zfill && comma) before = formatGroup(before); + var length = prefix.length + before.length + after.length + (zcomma ? 0 : negative.length), padding = length < width ? new Array(length = width - length + 1).join(fill) : ""; + if (zcomma) before = formatGroup(padding + before); + negative += prefix; + value = before + after; + return (align === "<" ? negative + value + padding : align === ">" ? padding + negative + value : align === "^" ? padding.substring(0, length >>= 1) + negative + value + padding.substring(length) : negative + (zcomma ? value : padding + value)) + suffix; + }; }; - }; + } var d3_format_re = /(?:([^{])?([<>=^]))?([+\- ])?([$#])?(0)?(\d+)?(,)?(\.-?\d+)?([a-z%])?/i; var d3_format_types = d3.map({ b: function(x) { @@ -2215,2240 +2241,2483 @@ d3 = function() { return (x = d3.round(x, d3_format_precision(x, p))).toFixed(Math.max(0, Math.min(20, d3_format_precision(x * (1 + 1e-15), p)))); } }); - function d3_format_precision(x, p) { - return p - (x ? Math.ceil(Math.log(x) / Math.LN10) : 1); - } function d3_format_typeDefault(x) { return x + ""; } - var d3_format_group = d3_identity; - if (d3_format_grouping) { - var d3_format_groupingLength = d3_format_grouping.length; - d3_format_group = function(value) { - var i = value.length, t = [], j = 0, g = d3_format_grouping[0]; - while (i > 0 && g > 0) { - t.push(value.substring(i -= g, i + g)); - g = d3_format_grouping[j = (j + 1) % d3_format_groupingLength]; - } - return t.reverse().join(d3_format_thousandsSeparator); - }; + var d3_time = d3.time = {}, d3_date = Date; + function d3_date_utc() { + this._ = new Date(arguments.length > 1 ? Date.UTC.apply(this, arguments) : arguments[0]); } - d3.geo = {}; - function d3_adder() {} - d3_adder.prototype = { - s: 0, - t: 0, - add: function(y) { - d3_adderSum(y, this.t, d3_adderTemp); - d3_adderSum(d3_adderTemp.s, this.s, this); - if (this.s) this.t += d3_adderTemp.t; else this.s = d3_adderTemp.t; + d3_date_utc.prototype = { + getDate: function() { + return this._.getUTCDate(); }, - reset: function() { - this.s = this.t = 0; + getDay: function() { + return this._.getUTCDay(); }, - valueOf: function() { - return this.s; - } - }; - var d3_adderTemp = new d3_adder(); - function d3_adderSum(a, b, o) { - var x = o.s = a + b, bv = x - a, av = x - bv; - o.t = a - av + (b - bv); - } - d3.geo.stream = function(object, listener) { - if (object && d3_geo_streamObjectType.hasOwnProperty(object.type)) { - d3_geo_streamObjectType[object.type](object, listener); - } else { - d3_geo_streamGeometry(object, listener); - } - }; - function d3_geo_streamGeometry(geometry, listener) { - if (geometry && d3_geo_streamGeometryType.hasOwnProperty(geometry.type)) { - d3_geo_streamGeometryType[geometry.type](geometry, listener); - } - } - var d3_geo_streamObjectType = { - Feature: function(feature, listener) { - d3_geo_streamGeometry(feature.geometry, listener); + getFullYear: function() { + return this._.getUTCFullYear(); }, - FeatureCollection: function(object, listener) { - var features = object.features, i = -1, n = features.length; - while (++i < n) d3_geo_streamGeometry(features[i].geometry, listener); - } - }; - var d3_geo_streamGeometryType = { - Sphere: function(object, listener) { - listener.sphere(); + getHours: function() { + return this._.getUTCHours(); }, - Point: function(object, listener) { - object = object.coordinates; - listener.point(object[0], object[1], object[2]); + getMilliseconds: function() { + return this._.getUTCMilliseconds(); }, - MultiPoint: function(object, listener) { - var coordinates = object.coordinates, i = -1, n = coordinates.length; - while (++i < n) object = coordinates[i], listener.point(object[0], object[1], object[2]); + getMinutes: function() { + return this._.getUTCMinutes(); }, - LineString: function(object, listener) { - d3_geo_streamLine(object.coordinates, listener, 0); + getMonth: function() { + return this._.getUTCMonth(); }, - MultiLineString: function(object, listener) { - var coordinates = object.coordinates, i = -1, n = coordinates.length; - while (++i < n) d3_geo_streamLine(coordinates[i], listener, 0); + getSeconds: function() { + return this._.getUTCSeconds(); }, - Polygon: function(object, listener) { - d3_geo_streamPolygon(object.coordinates, listener); + getTime: function() { + return this._.getTime(); }, - MultiPolygon: function(object, listener) { - var coordinates = object.coordinates, i = -1, n = coordinates.length; - while (++i < n) d3_geo_streamPolygon(coordinates[i], listener); + getTimezoneOffset: function() { + return 0; }, - GeometryCollection: function(object, listener) { - var geometries = object.geometries, i = -1, n = geometries.length; - while (++i < n) d3_geo_streamGeometry(geometries[i], listener); - } - }; - function d3_geo_streamLine(coordinates, listener, closed) { - var i = -1, n = coordinates.length - closed, coordinate; - listener.lineStart(); - while (++i < n) coordinate = coordinates[i], listener.point(coordinate[0], coordinate[1], coordinate[2]); - listener.lineEnd(); - } - function d3_geo_streamPolygon(coordinates, listener) { - var i = -1, n = coordinates.length; - listener.polygonStart(); - while (++i < n) d3_geo_streamLine(coordinates[i], listener, 1); - listener.polygonEnd(); - } - d3.geo.area = function(object) { - d3_geo_areaSum = 0; - d3.geo.stream(object, d3_geo_area); - return d3_geo_areaSum; - }; - var d3_geo_areaSum, d3_geo_areaRingSum = new d3_adder(); - var d3_geo_area = { - sphere: function() { - d3_geo_areaSum += 4 * Ï€; + valueOf: function() { + return this._.valueOf(); }, - point: d3_noop, - lineStart: d3_noop, - lineEnd: d3_noop, - polygonStart: function() { - d3_geo_areaRingSum.reset(); - d3_geo_area.lineStart = d3_geo_areaRingStart; + setDate: function() { + d3_time_prototype.setUTCDate.apply(this._, arguments); }, - polygonEnd: function() { - var area = 2 * d3_geo_areaRingSum; - d3_geo_areaSum += area < 0 ? 4 * Ï€ + area : area; - d3_geo_area.lineStart = d3_geo_area.lineEnd = d3_geo_area.point = d3_noop; + setDay: function() { + d3_time_prototype.setUTCDay.apply(this._, arguments); + }, + setFullYear: function() { + d3_time_prototype.setUTCFullYear.apply(this._, arguments); + }, + setHours: function() { + d3_time_prototype.setUTCHours.apply(this._, arguments); + }, + setMilliseconds: function() { + d3_time_prototype.setUTCMilliseconds.apply(this._, arguments); + }, + setMinutes: function() { + d3_time_prototype.setUTCMinutes.apply(this._, arguments); + }, + setMonth: function() { + d3_time_prototype.setUTCMonth.apply(this._, arguments); + }, + setSeconds: function() { + d3_time_prototype.setUTCSeconds.apply(this._, arguments); + }, + setTime: function() { + d3_time_prototype.setTime.apply(this._, arguments); } }; - function d3_geo_areaRingStart() { - var λ00, φ00, λ0, cosφ0, sinφ0; - d3_geo_area.point = function(λ, φ) { - d3_geo_area.point = nextPoint; - λ0 = (λ00 = λ) * d3_radians, cosφ0 = Math.cos(φ = (φ00 = φ) * d3_radians / 2 + Ï€ / 4), - sinφ0 = Math.sin(φ); - }; - function nextPoint(λ, φ) { - λ *= d3_radians; - φ = φ * d3_radians / 2 + Ï€ / 4; - var dλ = λ - λ0, cosφ = Math.cos(φ), sinφ = Math.sin(φ), k = sinφ0 * sinφ, u = cosφ0 * cosφ + k * Math.cos(dλ), v = k * Math.sin(dλ); - d3_geo_areaRingSum.add(Math.atan2(v, u)); - λ0 = λ, cosφ0 = cosφ, sinφ0 = sinφ; + var d3_time_prototype = Date.prototype; + function d3_time_interval(local, step, number) { + function round(date) { + var d0 = local(date), d1 = offset(d0, 1); + return date - d0 < d1 - date ? d0 : d1; } - d3_geo_area.lineEnd = function() { - nextPoint(λ00, φ00); - }; - } - function d3_geo_cartesian(spherical) { - var λ = spherical[0], φ = spherical[1], cosφ = Math.cos(φ); - return [ cosφ * Math.cos(λ), cosφ * Math.sin(λ), Math.sin(φ) ]; - } - function d3_geo_cartesianDot(a, b) { - return a[0] * b[0] + a[1] * b[1] + a[2] * b[2]; - } - function d3_geo_cartesianCross(a, b) { - return [ a[1] * b[2] - a[2] * b[1], a[2] * b[0] - a[0] * b[2], a[0] * b[1] - a[1] * b[0] ]; - } - function d3_geo_cartesianAdd(a, b) { - a[0] += b[0]; - a[1] += b[1]; - a[2] += b[2]; - } - function d3_geo_cartesianScale(vector, k) { - return [ vector[0] * k, vector[1] * k, vector[2] * k ]; - } - function d3_geo_cartesianNormalize(d) { - var l = Math.sqrt(d[0] * d[0] + d[1] * d[1] + d[2] * d[2]); - d[0] /= l; - d[1] /= l; - d[2] /= l; - } - function d3_geo_spherical(cartesian) { - return [ Math.atan2(cartesian[1], cartesian[0]), d3_asin(cartesian[2]) ]; - } - function d3_geo_sphericalEqual(a, b) { - return Math.abs(a[0] - b[0]) < ε && Math.abs(a[1] - b[1]) < ε; - } - d3.geo.bounds = function() { - var λ0, φ0, λ1, φ1, λ_, λ__, φ__, p0, dλSum, ranges, range; - var bound = { - point: point, - lineStart: lineStart, - lineEnd: lineEnd, - polygonStart: function() { - bound.point = ringPoint; - bound.lineStart = ringStart; - bound.lineEnd = ringEnd; - dλSum = 0; - d3_geo_area.polygonStart(); - }, - polygonEnd: function() { - d3_geo_area.polygonEnd(); - bound.point = point; - bound.lineStart = lineStart; - bound.lineEnd = lineEnd; - if (d3_geo_areaRingSum < 0) λ0 = -(λ1 = 180), φ0 = -(φ1 = 90); else if (dλSum > ε) φ1 = 90; else if (dλSum < -ε) φ0 = -90; - range[0] = λ0, range[1] = λ1; - } - }; - function point(λ, φ) { - ranges.push(range = [ λ0 = λ, λ1 = λ ]); - if (φ < φ0) φ0 = φ; - if (φ > φ1) φ1 = φ; + function ceil(date) { + step(date = local(new d3_date(date - 1)), 1); + return date; } - function linePoint(λ, φ) { - var p = d3_geo_cartesian([ λ * d3_radians, φ * d3_radians ]); - if (p0) { - var normal = d3_geo_cartesianCross(p0, p), equatorial = [ normal[1], -normal[0], 0 ], inflection = d3_geo_cartesianCross(equatorial, normal); - d3_geo_cartesianNormalize(inflection); - inflection = d3_geo_spherical(inflection); - var dλ = λ - λ_, s = dλ > 0 ? 1 : -1, λi = inflection[0] * d3_degrees * s, antimeridian = Math.abs(dλ) > 180; - if (antimeridian ^ (s * λ_ < λi && λi < s * λ)) { - var φi = inflection[1] * d3_degrees; - if (φi > φ1) φ1 = φi; - } else if (λi = (λi + 360) % 360 - 180, antimeridian ^ (s * λ_ < λi && λi < s * λ)) { - var φi = -inflection[1] * d3_degrees; - if (φi < φ0) φ0 = φi; - } else { - if (φ < φ0) φ0 = φ; - if (φ > φ1) φ1 = φ; - } - if (antimeridian) { - if (λ < λ_) { - if (angle(λ0, λ) > angle(λ0, λ1)) λ1 = λ; - } else { - if (angle(λ, λ1) > angle(λ0, λ1)) λ0 = λ; - } - } else { - if (λ1 >= λ0) { - if (λ < λ0) λ0 = λ; - if (λ > λ1) λ1 = λ; - } else { - if (λ > λ_) { - if (angle(λ0, λ) > angle(λ0, λ1)) λ1 = λ; - } else { - if (angle(λ, λ1) > angle(λ0, λ1)) λ0 = λ; - } - } + function offset(date, k) { + step(date = new d3_date(+date), k); + return date; + } + function range(t0, t1, dt) { + var time = ceil(t0), times = []; + if (dt > 1) { + while (time < t1) { + if (!(number(time) % dt)) times.push(new Date(+time)); + step(time, 1); } } else { - point(λ, φ); + while (time < t1) times.push(new Date(+time)), step(time, 1); } - p0 = p, λ_ = λ; - } - function lineStart() { - bound.point = linePoint; - } - function lineEnd() { - range[0] = λ0, range[1] = λ1; - bound.point = point; - p0 = null; - } - function ringPoint(λ, φ) { - if (p0) { - var dλ = λ - λ_; - dλSum += Math.abs(dλ) > 180 ? dλ + (dλ > 0 ? 360 : -360) : dλ; - } else λ__ = λ, φ__ = φ; - d3_geo_area.point(λ, φ); - linePoint(λ, φ); - } - function ringStart() { - d3_geo_area.lineStart(); - } - function ringEnd() { - ringPoint(λ__, φ__); - d3_geo_area.lineEnd(); - if (Math.abs(dλSum) > ε) λ0 = -(λ1 = 180); - range[0] = λ0, range[1] = λ1; - p0 = null; - } - function angle(λ0, λ1) { - return (λ1 -= λ0) < 0 ? λ1 + 360 : λ1; - } - function compareRanges(a, b) { - return a[0] - b[0]; + return times; } - function withinRange(x, range) { - return range[0] <= range[1] ? range[0] <= x && x <= range[1] : x < range[0] || range[1] < x; + function range_utc(t0, t1, dt) { + try { + d3_date = d3_date_utc; + var utc = new d3_date_utc(); + utc._ = t0; + return range(utc, t1, dt); + } finally { + d3_date = Date; + } } - return function(feature) { - φ1 = λ1 = -(λ0 = φ0 = Infinity); - ranges = []; - d3.geo.stream(feature, bound); - var n = ranges.length; - if (n) { - ranges.sort(compareRanges); - for (var i = 1, a = ranges[0], b, merged = [ a ]; i < n; ++i) { - b = ranges[i]; - if (withinRange(b[0], a) || withinRange(b[1], a)) { - if (angle(a[0], b[1]) > angle(a[0], a[1])) a[1] = b[1]; - if (angle(b[0], a[1]) > angle(a[0], a[1])) a[0] = b[0]; - } else { - merged.push(a = b); + local.floor = local; + local.round = round; + local.ceil = ceil; + local.offset = offset; + local.range = range; + var utc = local.utc = d3_time_interval_utc(local); + utc.floor = utc; + utc.round = d3_time_interval_utc(round); + utc.ceil = d3_time_interval_utc(ceil); + utc.offset = d3_time_interval_utc(offset); + utc.range = range_utc; + return local; + } + function d3_time_interval_utc(method) { + return function(date, k) { + try { + d3_date = d3_date_utc; + var utc = new d3_date_utc(); + utc._ = date; + return method(utc, k)._; + } finally { + d3_date = Date; + } + }; + } + d3_time.year = d3_time_interval(function(date) { + date = d3_time.day(date); + date.setMonth(0, 1); + return date; + }, function(date, offset) { + date.setFullYear(date.getFullYear() + offset); + }, function(date) { + return date.getFullYear(); + }); + d3_time.years = d3_time.year.range; + d3_time.years.utc = d3_time.year.utc.range; + d3_time.day = d3_time_interval(function(date) { + var day = new d3_date(2e3, 0); + day.setFullYear(date.getFullYear(), date.getMonth(), date.getDate()); + return day; + }, function(date, offset) { + date.setDate(date.getDate() + offset); + }, function(date) { + return date.getDate() - 1; + }); + d3_time.days = d3_time.day.range; + d3_time.days.utc = d3_time.day.utc.range; + d3_time.dayOfYear = function(date) { + var year = d3_time.year(date); + return Math.floor((date - year - (date.getTimezoneOffset() - year.getTimezoneOffset()) * 6e4) / 864e5); + }; + [ "sunday", "monday", "tuesday", "wednesday", "thursday", "friday", "saturday" ].forEach(function(day, i) { + i = 7 - i; + var interval = d3_time[day] = d3_time_interval(function(date) { + (date = d3_time.day(date)).setDate(date.getDate() - (date.getDay() + i) % 7); + return date; + }, function(date, offset) { + date.setDate(date.getDate() + Math.floor(offset) * 7); + }, function(date) { + var day = d3_time.year(date).getDay(); + return Math.floor((d3_time.dayOfYear(date) + (day + i) % 7) / 7) - (day !== i); + }); + d3_time[day + "s"] = interval.range; + d3_time[day + "s"].utc = interval.utc.range; + d3_time[day + "OfYear"] = function(date) { + var day = d3_time.year(date).getDay(); + return Math.floor((d3_time.dayOfYear(date) + (day + i) % 7) / 7); + }; + }); + d3_time.week = d3_time.sunday; + d3_time.weeks = d3_time.sunday.range; + d3_time.weeks.utc = d3_time.sunday.utc.range; + d3_time.weekOfYear = d3_time.sundayOfYear; + function d3_locale_timeFormat(locale) { + var locale_dateTime = locale.dateTime, locale_date = locale.date, locale_time = locale.time, locale_periods = locale.periods, locale_days = locale.days, locale_shortDays = locale.shortDays, locale_months = locale.months, locale_shortMonths = locale.shortMonths; + function d3_time_format(template) { + var n = template.length; + function format(date) { + var string = [], i = -1, j = 0, c, p, f; + while (++i < n) { + if (template.charCodeAt(i) === 37) { + string.push(template.substring(j, i)); + if ((p = d3_time_formatPads[c = template.charAt(++i)]) != null) c = template.charAt(++i); + if (f = d3_time_formats[c]) c = f(date, p == null ? c === "e" ? " " : "0" : p); + string.push(c); + j = i + 1; } } - var best = -Infinity, dλ; - for (var n = merged.length - 1, i = 0, a = merged[n], b; i <= n; a = b, ++i) { - b = merged[i]; - if ((dλ = angle(a[1], b[0])) > best) best = dλ, λ0 = b[0], λ1 = a[1]; + string.push(template.substring(j, i)); + return string.join(""); + } + format.parse = function(string) { + var d = { + y: 1900, + m: 0, + d: 1, + H: 0, + M: 0, + S: 0, + L: 0, + Z: null + }, i = d3_time_parse(d, template, string, 0); + if (i != string.length) return null; + if ("p" in d) d.H = d.H % 12 + d.p * 12; + var localZ = d.Z != null && d3_date !== d3_date_utc, date = new (localZ ? d3_date_utc : d3_date)(); + if ("j" in d) date.setFullYear(d.y, 0, d.j); else if ("w" in d && ("W" in d || "U" in d)) { + date.setFullYear(d.y, 0, 1); + date.setFullYear(d.y, 0, "W" in d ? (d.w + 6) % 7 + d.W * 7 - (date.getDay() + 5) % 7 : d.w + d.U * 7 - (date.getDay() + 6) % 7); + } else date.setFullYear(d.y, d.m, d.d); + date.setHours(d.H + Math.floor(d.Z / 100), d.M + d.Z % 100, d.S, d.L); + return localZ ? date._ : date; + }; + format.toString = function() { + return template; + }; + return format; + } + function d3_time_parse(date, template, string, j) { + var c, p, t, i = 0, n = template.length, m = string.length; + while (i < n) { + if (j >= m) return -1; + c = template.charCodeAt(i++); + if (c === 37) { + t = template.charAt(i++); + p = d3_time_parsers[t in d3_time_formatPads ? template.charAt(i++) : t]; + if (!p || (j = p(date, string, j)) < 0) return -1; + } else if (c != string.charCodeAt(j++)) { + return -1; } } - ranges = range = null; - return λ0 === Infinity || φ0 === Infinity ? [ [ NaN, NaN ], [ NaN, NaN ] ] : [ [ λ0, φ0 ], [ λ1, φ1 ] ]; - }; - }(); - d3.geo.centroid = function(object) { - d3_geo_centroidW0 = d3_geo_centroidW1 = d3_geo_centroidX0 = d3_geo_centroidY0 = d3_geo_centroidZ0 = d3_geo_centroidX1 = d3_geo_centroidY1 = d3_geo_centroidZ1 = d3_geo_centroidX2 = d3_geo_centroidY2 = d3_geo_centroidZ2 = 0; - d3.geo.stream(object, d3_geo_centroid); - var x = d3_geo_centroidX2, y = d3_geo_centroidY2, z = d3_geo_centroidZ2, m = x * x + y * y + z * z; - if (m < ε2) { - x = d3_geo_centroidX1, y = d3_geo_centroidY1, z = d3_geo_centroidZ1; - if (d3_geo_centroidW1 < ε) x = d3_geo_centroidX0, y = d3_geo_centroidY0, z = d3_geo_centroidZ0; - m = x * x + y * y + z * z; - if (m < ε2) return [ NaN, NaN ]; - } - return [ Math.atan2(y, x) * d3_degrees, d3_asin(z / Math.sqrt(m)) * d3_degrees ]; - }; - var d3_geo_centroidW0, d3_geo_centroidW1, d3_geo_centroidX0, d3_geo_centroidY0, d3_geo_centroidZ0, d3_geo_centroidX1, d3_geo_centroidY1, d3_geo_centroidZ1, d3_geo_centroidX2, d3_geo_centroidY2, d3_geo_centroidZ2; - var d3_geo_centroid = { - sphere: d3_noop, - point: d3_geo_centroidPoint, - lineStart: d3_geo_centroidLineStart, - lineEnd: d3_geo_centroidLineEnd, - polygonStart: function() { - d3_geo_centroid.lineStart = d3_geo_centroidRingStart; - }, - polygonEnd: function() { - d3_geo_centroid.lineStart = d3_geo_centroidLineStart; + return j; } - }; - function d3_geo_centroidPoint(λ, φ) { - λ *= d3_radians; - var cosφ = Math.cos(φ *= d3_radians); - d3_geo_centroidPointXYZ(cosφ * Math.cos(λ), cosφ * Math.sin(λ), Math.sin(φ)); - } - function d3_geo_centroidPointXYZ(x, y, z) { - ++d3_geo_centroidW0; - d3_geo_centroidX0 += (x - d3_geo_centroidX0) / d3_geo_centroidW0; - d3_geo_centroidY0 += (y - d3_geo_centroidY0) / d3_geo_centroidW0; - d3_geo_centroidZ0 += (z - d3_geo_centroidZ0) / d3_geo_centroidW0; - } - function d3_geo_centroidLineStart() { - var x0, y0, z0; - d3_geo_centroid.point = function(λ, φ) { - λ *= d3_radians; - var cosφ = Math.cos(φ *= d3_radians); - x0 = cosφ * Math.cos(λ); - y0 = cosφ * Math.sin(λ); - z0 = Math.sin(φ); - d3_geo_centroid.point = nextPoint; - d3_geo_centroidPointXYZ(x0, y0, z0); + d3_time_format.utc = function(template) { + var local = d3_time_format(template); + function format(date) { + try { + d3_date = d3_date_utc; + var utc = new d3_date(); + utc._ = date; + return local(utc); + } finally { + d3_date = Date; + } + } + format.parse = function(string) { + try { + d3_date = d3_date_utc; + var date = local.parse(string); + return date && date._; + } finally { + d3_date = Date; + } + }; + format.toString = local.toString; + return format; }; - function nextPoint(λ, φ) { - λ *= d3_radians; - var cosφ = Math.cos(φ *= d3_radians), x = cosφ * Math.cos(λ), y = cosφ * Math.sin(λ), z = Math.sin(φ), w = Math.atan2(Math.sqrt((w = y0 * z - z0 * y) * w + (w = z0 * x - x0 * z) * w + (w = x0 * y - y0 * x) * w), x0 * x + y0 * y + z0 * z); - d3_geo_centroidW1 += w; - d3_geo_centroidX1 += w * (x0 + (x0 = x)); - d3_geo_centroidY1 += w * (y0 + (y0 = y)); - d3_geo_centroidZ1 += w * (z0 + (z0 = z)); - d3_geo_centroidPointXYZ(x0, y0, z0); - } + d3_time_format.multi = d3_time_format.utc.multi = d3_time_formatMulti; + var d3_time_periodLookup = d3.map(), d3_time_dayRe = d3_time_formatRe(locale_days), d3_time_dayLookup = d3_time_formatLookup(locale_days), d3_time_dayAbbrevRe = d3_time_formatRe(locale_shortDays), d3_time_dayAbbrevLookup = d3_time_formatLookup(locale_shortDays), d3_time_monthRe = d3_time_formatRe(locale_months), d3_time_monthLookup = d3_time_formatLookup(locale_months), d3_time_monthAbbrevRe = d3_time_formatRe(locale_shortMonths), d3_time_monthAbbrevLookup = d3_time_formatLookup(locale_shortMonths); + locale_periods.forEach(function(p, i) { + d3_time_periodLookup.set(p.toLowerCase(), i); + }); + var d3_time_formats = { + a: function(d) { + return locale_shortDays[d.getDay()]; + }, + A: function(d) { + return locale_days[d.getDay()]; + }, + b: function(d) { + return locale_shortMonths[d.getMonth()]; + }, + B: function(d) { + return locale_months[d.getMonth()]; + }, + c: d3_time_format(locale_dateTime), + d: function(d, p) { + return d3_time_formatPad(d.getDate(), p, 2); + }, + e: function(d, p) { + return d3_time_formatPad(d.getDate(), p, 2); + }, + H: function(d, p) { + return d3_time_formatPad(d.getHours(), p, 2); + }, + I: function(d, p) { + return d3_time_formatPad(d.getHours() % 12 || 12, p, 2); + }, + j: function(d, p) { + return d3_time_formatPad(1 + d3_time.dayOfYear(d), p, 3); + }, + L: function(d, p) { + return d3_time_formatPad(d.getMilliseconds(), p, 3); + }, + m: function(d, p) { + return d3_time_formatPad(d.getMonth() + 1, p, 2); + }, + M: function(d, p) { + return d3_time_formatPad(d.getMinutes(), p, 2); + }, + p: function(d) { + return locale_periods[+(d.getHours() >= 12)]; + }, + S: function(d, p) { + return d3_time_formatPad(d.getSeconds(), p, 2); + }, + U: function(d, p) { + return d3_time_formatPad(d3_time.sundayOfYear(d), p, 2); + }, + w: function(d) { + return d.getDay(); + }, + W: function(d, p) { + return d3_time_formatPad(d3_time.mondayOfYear(d), p, 2); + }, + x: d3_time_format(locale_date), + X: d3_time_format(locale_time), + y: function(d, p) { + return d3_time_formatPad(d.getFullYear() % 100, p, 2); + }, + Y: function(d, p) { + return d3_time_formatPad(d.getFullYear() % 1e4, p, 4); + }, + Z: d3_time_zone, + "%": function() { + return "%"; + } + }; + var d3_time_parsers = { + a: d3_time_parseWeekdayAbbrev, + A: d3_time_parseWeekday, + b: d3_time_parseMonthAbbrev, + B: d3_time_parseMonth, + c: d3_time_parseLocaleFull, + d: d3_time_parseDay, + e: d3_time_parseDay, + H: d3_time_parseHour24, + I: d3_time_parseHour24, + j: d3_time_parseDayOfYear, + L: d3_time_parseMilliseconds, + m: d3_time_parseMonthNumber, + M: d3_time_parseMinutes, + p: d3_time_parseAmPm, + S: d3_time_parseSeconds, + U: d3_time_parseWeekNumberSunday, + w: d3_time_parseWeekdayNumber, + W: d3_time_parseWeekNumberMonday, + x: d3_time_parseLocaleDate, + X: d3_time_parseLocaleTime, + y: d3_time_parseYear, + Y: d3_time_parseFullYear, + Z: d3_time_parseZone, + "%": d3_time_parseLiteralPercent + }; + function d3_time_parseWeekdayAbbrev(date, string, i) { + d3_time_dayAbbrevRe.lastIndex = 0; + var n = d3_time_dayAbbrevRe.exec(string.substring(i)); + return n ? (date.w = d3_time_dayAbbrevLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; + } + function d3_time_parseWeekday(date, string, i) { + d3_time_dayRe.lastIndex = 0; + var n = d3_time_dayRe.exec(string.substring(i)); + return n ? (date.w = d3_time_dayLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; + } + function d3_time_parseMonthAbbrev(date, string, i) { + d3_time_monthAbbrevRe.lastIndex = 0; + var n = d3_time_monthAbbrevRe.exec(string.substring(i)); + return n ? (date.m = d3_time_monthAbbrevLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; + } + function d3_time_parseMonth(date, string, i) { + d3_time_monthRe.lastIndex = 0; + var n = d3_time_monthRe.exec(string.substring(i)); + return n ? (date.m = d3_time_monthLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; + } + function d3_time_parseLocaleFull(date, string, i) { + return d3_time_parse(date, d3_time_formats.c.toString(), string, i); + } + function d3_time_parseLocaleDate(date, string, i) { + return d3_time_parse(date, d3_time_formats.x.toString(), string, i); + } + function d3_time_parseLocaleTime(date, string, i) { + return d3_time_parse(date, d3_time_formats.X.toString(), string, i); + } + function d3_time_parseAmPm(date, string, i) { + var n = d3_time_periodLookup.get(string.substring(i, i += 2).toLowerCase()); + return n == null ? -1 : (date.p = n, i); + } + return d3_time_format; } - function d3_geo_centroidLineEnd() { - d3_geo_centroid.point = d3_geo_centroidPoint; + var d3_time_formatPads = { + "-": "", + _: " ", + "0": "0" + }, d3_time_numberRe = /^\s*\d+/, d3_time_percentRe = /^%/; + function d3_time_formatPad(value, fill, width) { + var sign = value < 0 ? "-" : "", string = (sign ? -value : value) + "", length = string.length; + return sign + (length < width ? new Array(width - length + 1).join(fill) + string : string); } - function d3_geo_centroidRingStart() { - var λ00, φ00, x0, y0, z0; - d3_geo_centroid.point = function(λ, φ) { - λ00 = λ, φ00 = φ; - d3_geo_centroid.point = nextPoint; - λ *= d3_radians; - var cosφ = Math.cos(φ *= d3_radians); - x0 = cosφ * Math.cos(λ); - y0 = cosφ * Math.sin(λ); - z0 = Math.sin(φ); - d3_geo_centroidPointXYZ(x0, y0, z0); - }; - d3_geo_centroid.lineEnd = function() { - nextPoint(λ00, φ00); - d3_geo_centroid.lineEnd = d3_geo_centroidLineEnd; - d3_geo_centroid.point = d3_geo_centroidPoint; + function d3_time_formatRe(names) { + return new RegExp("^(?:" + names.map(d3.requote).join("|") + ")", "i"); + } + function d3_time_formatLookup(names) { + var map = new d3_Map(), i = -1, n = names.length; + while (++i < n) map.set(names[i].toLowerCase(), i); + return map; + } + function d3_time_parseWeekdayNumber(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 1)); + return n ? (date.w = +n[0], i + n[0].length) : -1; + } + function d3_time_parseWeekNumberSunday(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i)); + return n ? (date.U = +n[0], i + n[0].length) : -1; + } + function d3_time_parseWeekNumberMonday(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i)); + return n ? (date.W = +n[0], i + n[0].length) : -1; + } + function d3_time_parseFullYear(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 4)); + return n ? (date.y = +n[0], i + n[0].length) : -1; + } + function d3_time_parseYear(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.y = d3_time_expandYear(+n[0]), i + n[0].length) : -1; + } + function d3_time_parseZone(date, string, i) { + return /^[+-]\d{4}$/.test(string = string.substring(i, i + 5)) ? (date.Z = +string, + i + 5) : -1; + } + function d3_time_expandYear(d) { + return d + (d > 68 ? 1900 : 2e3); + } + function d3_time_parseMonthNumber(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.m = n[0] - 1, i + n[0].length) : -1; + } + function d3_time_parseDay(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.d = +n[0], i + n[0].length) : -1; + } + function d3_time_parseDayOfYear(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 3)); + return n ? (date.j = +n[0], i + n[0].length) : -1; + } + function d3_time_parseHour24(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.H = +n[0], i + n[0].length) : -1; + } + function d3_time_parseMinutes(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.M = +n[0], i + n[0].length) : -1; + } + function d3_time_parseSeconds(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 2)); + return n ? (date.S = +n[0], i + n[0].length) : -1; + } + function d3_time_parseMilliseconds(date, string, i) { + d3_time_numberRe.lastIndex = 0; + var n = d3_time_numberRe.exec(string.substring(i, i + 3)); + return n ? (date.L = +n[0], i + n[0].length) : -1; + } + function d3_time_zone(d) { + var z = d.getTimezoneOffset(), zs = z > 0 ? "-" : "+", zh = ~~(abs(z) / 60), zm = abs(z) % 60; + return zs + d3_time_formatPad(zh, "0", 2) + d3_time_formatPad(zm, "0", 2); + } + function d3_time_parseLiteralPercent(date, string, i) { + d3_time_percentRe.lastIndex = 0; + var n = d3_time_percentRe.exec(string.substring(i, i + 1)); + return n ? i + n[0].length : -1; + } + function d3_time_formatMulti(formats) { + var n = formats.length, i = -1; + while (++i < n) formats[i][0] = this(formats[i][0]); + return function(date) { + var i = 0, f = formats[i]; + while (!f[1](date)) f = formats[++i]; + return f[0](date); }; - function nextPoint(λ, φ) { - λ *= d3_radians; - var cosφ = Math.cos(φ *= d3_radians), x = cosφ * Math.cos(λ), y = cosφ * Math.sin(λ), z = Math.sin(φ), cx = y0 * z - z0 * y, cy = z0 * x - x0 * z, cz = x0 * y - y0 * x, m = Math.sqrt(cx * cx + cy * cy + cz * cz), u = x0 * x + y0 * y + z0 * z, v = m && -d3_acos(u) / m, w = Math.atan2(m, u); - d3_geo_centroidX2 += v * cx; - d3_geo_centroidY2 += v * cy; - d3_geo_centroidZ2 += v * cz; - d3_geo_centroidW1 += w; - d3_geo_centroidX1 += w * (x0 + (x0 = x)); - d3_geo_centroidY1 += w * (y0 + (y0 = y)); - d3_geo_centroidZ1 += w * (z0 + (z0 = z)); - d3_geo_centroidPointXYZ(x0, y0, z0); - } } - function d3_true() { - return true; + d3.locale = function(locale) { + return { + numberFormat: d3_locale_numberFormat(locale), + timeFormat: d3_locale_timeFormat(locale) + }; + }; + var d3_locale_enUS = d3.locale({ + decimal: ".", + thousands: ",", + grouping: [ 3 ], + currency: [ "$", "" ], + dateTime: "%a %b %e %X %Y", + date: "%m/%d/%Y", + time: "%H:%M:%S", + periods: [ "AM", "PM" ], + days: [ "Sunday", "Monday", "Tuesday", "Wednesday", "Thursday", "Friday", "Saturday" ], + shortDays: [ "Sun", "Mon", "Tue", "Wed", "Thu", "Fri", "Sat" ], + months: [ "January", "February", "March", "April", "May", "June", "July", "August", "September", "October", "November", "December" ], + shortMonths: [ "Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec" ] + }); + d3.format = d3_locale_enUS.numberFormat; + d3.geo = {}; + function d3_adder() {} + d3_adder.prototype = { + s: 0, + t: 0, + add: function(y) { + d3_adderSum(y, this.t, d3_adderTemp); + d3_adderSum(d3_adderTemp.s, this.s, this); + if (this.s) this.t += d3_adderTemp.t; else this.s = d3_adderTemp.t; + }, + reset: function() { + this.s = this.t = 0; + }, + valueOf: function() { + return this.s; + } + }; + var d3_adderTemp = new d3_adder(); + function d3_adderSum(a, b, o) { + var x = o.s = a + b, bv = x - a, av = x - bv; + o.t = a - av + (b - bv); } - function d3_geo_clipPolygon(segments, compare, clipStartInside, interpolate, listener) { - var subject = [], clip = []; - segments.forEach(function(segment) { - if ((n = segment.length - 1) <= 0) return; - var n, p0 = segment[0], p1 = segment[n]; - if (d3_geo_sphericalEqual(p0, p1)) { - listener.lineStart(); - for (var i = 0; i < n; ++i) listener.point((p0 = segment[i])[0], p0[1]); - listener.lineEnd(); - return; - } - var a = { - point: p0, - points: segment, - other: null, - visited: false, - entry: true, - subject: true - }, b = { - point: p0, - points: [ p0 ], - other: a, - visited: false, - entry: false, - subject: false - }; - a.other = b; - subject.push(a); - clip.push(b); - a = { - point: p1, - points: [ p1 ], - other: null, - visited: false, - entry: false, - subject: true - }; - b = { - point: p1, - points: [ p1 ], - other: a, - visited: false, - entry: true, - subject: false - }; - a.other = b; - subject.push(a); - clip.push(b); - }); - clip.sort(compare); - d3_geo_clipPolygonLinkCircular(subject); - d3_geo_clipPolygonLinkCircular(clip); - if (!subject.length) return; - for (var i = 0, entry = clipStartInside, n = clip.length; i < n; ++i) { - clip[i].entry = entry = !entry; + d3.geo.stream = function(object, listener) { + if (object && d3_geo_streamObjectType.hasOwnProperty(object.type)) { + d3_geo_streamObjectType[object.type](object, listener); + } else { + d3_geo_streamGeometry(object, listener); } - var start = subject[0], current, points, point; - while (1) { - current = start; - while (current.visited) if ((current = current.next) === start) return; - points = current.points; - listener.lineStart(); - do { - current.visited = current.other.visited = true; - if (current.entry) { - if (current.subject) { - for (var i = 0; i < points.length; i++) listener.point((point = points[i])[0], point[1]); - } else { - interpolate(current.point, current.next.point, 1, listener); - } - current = current.next; - } else { - if (current.subject) { - points = current.prev.points; - for (var i = points.length; --i >= 0; ) listener.point((point = points[i])[0], point[1]); - } else { - interpolate(current.point, current.prev.point, -1, listener); - } - current = current.prev; - } - current = current.other; - points = current.points; - } while (!current.visited); - listener.lineEnd(); + }; + function d3_geo_streamGeometry(geometry, listener) { + if (geometry && d3_geo_streamGeometryType.hasOwnProperty(geometry.type)) { + d3_geo_streamGeometryType[geometry.type](geometry, listener); } } - function d3_geo_clipPolygonLinkCircular(array) { - if (!(n = array.length)) return; - var n, i = 0, a = array[0], b; - while (++i < n) { - a.next = b = array[i]; - b.prev = a; - a = b; + var d3_geo_streamObjectType = { + Feature: function(feature, listener) { + d3_geo_streamGeometry(feature.geometry, listener); + }, + FeatureCollection: function(object, listener) { + var features = object.features, i = -1, n = features.length; + while (++i < n) d3_geo_streamGeometry(features[i].geometry, listener); } - a.next = b = array[0]; - b.prev = a; - } - function d3_geo_clip(pointVisible, clipLine, interpolate, clipStart) { - return function(rotate, listener) { - var line = clipLine(listener), rotatedClipStart = rotate.invert(clipStart[0], clipStart[1]); - var clip = { - point: point, - lineStart: lineStart, - lineEnd: lineEnd, - polygonStart: function() { - clip.point = pointRing; - clip.lineStart = ringStart; - clip.lineEnd = ringEnd; - segments = []; - polygon = []; - listener.polygonStart(); - }, - polygonEnd: function() { - clip.point = point; - clip.lineStart = lineStart; - clip.lineEnd = lineEnd; - segments = d3.merge(segments); - var clipStartInside = d3_geo_pointInPolygon(rotatedClipStart, polygon); - if (segments.length) { - d3_geo_clipPolygon(segments, d3_geo_clipSort, clipStartInside, interpolate, listener); - } else if (clipStartInside) { - listener.lineStart(); - interpolate(null, null, 1, listener); - listener.lineEnd(); - } - listener.polygonEnd(); - segments = polygon = null; - }, - sphere: function() { - listener.polygonStart(); - listener.lineStart(); - interpolate(null, null, 1, listener); - listener.lineEnd(); - listener.polygonEnd(); - } - }; - function point(λ, φ) { - var point = rotate(λ, φ); - if (pointVisible(λ = point[0], φ = point[1])) listener.point(λ, φ); - } - function pointLine(λ, φ) { - var point = rotate(λ, φ); - line.point(point[0], point[1]); - } - function lineStart() { - clip.point = pointLine; - line.lineStart(); - } - function lineEnd() { - clip.point = point; - line.lineEnd(); - } - var segments; - var buffer = d3_geo_clipBufferListener(), ringListener = clipLine(buffer), polygon, ring; - function pointRing(λ, φ) { - ring.push([ λ, φ ]); - var point = rotate(λ, φ); - ringListener.point(point[0], point[1]); - } - function ringStart() { - ringListener.lineStart(); - ring = []; - } - function ringEnd() { - pointRing(ring[0][0], ring[0][1]); - ringListener.lineEnd(); - var clean = ringListener.clean(), ringSegments = buffer.buffer(), segment, n = ringSegments.length; - ring.pop(); - polygon.push(ring); - ring = null; - if (!n) return; - if (clean & 1) { - segment = ringSegments[0]; - var n = segment.length - 1, i = -1, point; - listener.lineStart(); - while (++i < n) listener.point((point = segment[i])[0], point[1]); - listener.lineEnd(); - return; - } - if (n > 1 && clean & 2) ringSegments.push(ringSegments.pop().concat(ringSegments.shift())); - segments.push(ringSegments.filter(d3_geo_clipSegmentLength1)); - } - return clip; - }; + }; + var d3_geo_streamGeometryType = { + Sphere: function(object, listener) { + listener.sphere(); + }, + Point: function(object, listener) { + object = object.coordinates; + listener.point(object[0], object[1], object[2]); + }, + MultiPoint: function(object, listener) { + var coordinates = object.coordinates, i = -1, n = coordinates.length; + while (++i < n) object = coordinates[i], listener.point(object[0], object[1], object[2]); + }, + LineString: function(object, listener) { + d3_geo_streamLine(object.coordinates, listener, 0); + }, + MultiLineString: function(object, listener) { + var coordinates = object.coordinates, i = -1, n = coordinates.length; + while (++i < n) d3_geo_streamLine(coordinates[i], listener, 0); + }, + Polygon: function(object, listener) { + d3_geo_streamPolygon(object.coordinates, listener); + }, + MultiPolygon: function(object, listener) { + var coordinates = object.coordinates, i = -1, n = coordinates.length; + while (++i < n) d3_geo_streamPolygon(coordinates[i], listener); + }, + GeometryCollection: function(object, listener) { + var geometries = object.geometries, i = -1, n = geometries.length; + while (++i < n) d3_geo_streamGeometry(geometries[i], listener); + } + }; + function d3_geo_streamLine(coordinates, listener, closed) { + var i = -1, n = coordinates.length - closed, coordinate; + listener.lineStart(); + while (++i < n) coordinate = coordinates[i], listener.point(coordinate[0], coordinate[1], coordinate[2]); + listener.lineEnd(); } - function d3_geo_clipSegmentLength1(segment) { - return segment.length > 1; + function d3_geo_streamPolygon(coordinates, listener) { + var i = -1, n = coordinates.length; + listener.polygonStart(); + while (++i < n) d3_geo_streamLine(coordinates[i], listener, 1); + listener.polygonEnd(); } - function d3_geo_clipBufferListener() { - var lines = [], line; - return { - lineStart: function() { - lines.push(line = []); - }, - point: function(λ, φ) { - line.push([ λ, φ ]); - }, - lineEnd: d3_noop, - buffer: function() { - var buffer = lines; - lines = []; - line = null; - return buffer; - }, - rejoin: function() { - if (lines.length > 1) lines.push(lines.pop().concat(lines.shift())); - } + d3.geo.area = function(object) { + d3_geo_areaSum = 0; + d3.geo.stream(object, d3_geo_area); + return d3_geo_areaSum; + }; + var d3_geo_areaSum, d3_geo_areaRingSum = new d3_adder(); + var d3_geo_area = { + sphere: function() { + d3_geo_areaSum += 4 * Ï€; + }, + point: d3_noop, + lineStart: d3_noop, + lineEnd: d3_noop, + polygonStart: function() { + d3_geo_areaRingSum.reset(); + d3_geo_area.lineStart = d3_geo_areaRingStart; + }, + polygonEnd: function() { + var area = 2 * d3_geo_areaRingSum; + d3_geo_areaSum += area < 0 ? 4 * Ï€ + area : area; + d3_geo_area.lineStart = d3_geo_area.lineEnd = d3_geo_area.point = d3_noop; + } + }; + function d3_geo_areaRingStart() { + var λ00, φ00, λ0, cosφ0, sinφ0; + d3_geo_area.point = function(λ, φ) { + d3_geo_area.point = nextPoint; + λ0 = (λ00 = λ) * d3_radians, cosφ0 = Math.cos(φ = (φ00 = φ) * d3_radians / 2 + Ï€ / 4), + sinφ0 = Math.sin(φ); + }; + function nextPoint(λ, φ) { + λ *= d3_radians; + φ = φ * d3_radians / 2 + Ï€ / 4; + var dλ = λ - λ0, cosφ = Math.cos(φ), sinφ = Math.sin(φ), k = sinφ0 * sinφ, u = cosφ0 * cosφ + k * Math.cos(dλ), v = k * Math.sin(dλ); + d3_geo_areaRingSum.add(Math.atan2(v, u)); + λ0 = λ, cosφ0 = cosφ, sinφ0 = sinφ; + } + d3_geo_area.lineEnd = function() { + nextPoint(λ00, φ00); }; } - function d3_geo_clipSort(a, b) { - return ((a = a.point)[0] < 0 ? a[1] - halfÏ€ - ε : halfÏ€ - a[1]) - ((b = b.point)[0] < 0 ? b[1] - halfÏ€ - ε : halfÏ€ - b[1]); + function d3_geo_cartesian(spherical) { + var λ = spherical[0], φ = spherical[1], cosφ = Math.cos(φ); + return [ cosφ * Math.cos(λ), cosφ * Math.sin(λ), Math.sin(φ) ]; } - function d3_geo_pointInPolygon(point, polygon) { - var meridian = point[0], parallel = point[1], meridianNormal = [ Math.sin(meridian), -Math.cos(meridian), 0 ], polarAngle = 0, winding = 0; - d3_geo_areaRingSum.reset(); - for (var i = 0, n = polygon.length; i < n; ++i) { - var ring = polygon[i], m = ring.length; - if (!m) continue; - var point0 = ring[0], λ0 = point0[0], φ0 = point0[1] / 2 + Ï€ / 4, sinφ0 = Math.sin(φ0), cosφ0 = Math.cos(φ0), j = 1; - while (true) { - if (j === m) j = 0; - point = ring[j]; - var λ = point[0], φ = point[1] / 2 + Ï€ / 4, sinφ = Math.sin(φ), cosφ = Math.cos(φ), dλ = λ - λ0, antimeridian = Math.abs(dλ) > Ï€, k = sinφ0 * sinφ; - d3_geo_areaRingSum.add(Math.atan2(k * Math.sin(dλ), cosφ0 * cosφ + k * Math.cos(dλ))); - polarAngle += antimeridian ? dλ + (dλ >= 0 ? 2 : -2) * Ï€ : dλ; - if (antimeridian ^ λ0 >= meridian ^ λ >= meridian) { - var arc = d3_geo_cartesianCross(d3_geo_cartesian(point0), d3_geo_cartesian(point)); - d3_geo_cartesianNormalize(arc); - var intersection = d3_geo_cartesianCross(meridianNormal, arc); - d3_geo_cartesianNormalize(intersection); - var φarc = (antimeridian ^ dλ >= 0 ? -1 : 1) * d3_asin(intersection[2]); - if (parallel > φarc || parallel === φarc && (arc[0] || arc[1])) { - winding += antimeridian ^ dλ >= 0 ? 1 : -1; - } - } - if (!j++) break; - λ0 = λ, sinφ0 = sinφ, cosφ0 = cosφ, point0 = point; - } - } - return (polarAngle < -ε || polarAngle < ε && d3_geo_areaRingSum < 0) ^ winding & 1; + function d3_geo_cartesianDot(a, b) { + return a[0] * b[0] + a[1] * b[1] + a[2] * b[2]; } - var d3_geo_clipAntimeridian = d3_geo_clip(d3_true, d3_geo_clipAntimeridianLine, d3_geo_clipAntimeridianInterpolate, [ -Ï€, -Ï€ / 2 ]); - function d3_geo_clipAntimeridianLine(listener) { - var λ0 = NaN, φ0 = NaN, sλ0 = NaN, clean; - return { - lineStart: function() { - listener.lineStart(); - clean = 1; - }, - point: function(λ1, φ1) { - var sλ1 = λ1 > 0 ? Ï€ : -Ï€, dλ = Math.abs(λ1 - λ0); - if (Math.abs(dλ - Ï€) < ε) { - listener.point(λ0, φ0 = (φ0 + φ1) / 2 > 0 ? halfÏ€ : -halfÏ€); - listener.point(sλ0, φ0); - listener.lineEnd(); - listener.lineStart(); - listener.point(sλ1, φ0); - listener.point(λ1, φ0); - clean = 0; - } else if (sλ0 !== sλ1 && dλ >= Ï€) { - if (Math.abs(λ0 - sλ0) < ε) λ0 -= sλ0 * ε; - if (Math.abs(λ1 - sλ1) < ε) λ1 -= sλ1 * ε; - φ0 = d3_geo_clipAntimeridianIntersect(λ0, φ0, λ1, φ1); - listener.point(sλ0, φ0); - listener.lineEnd(); - listener.lineStart(); - listener.point(sλ1, φ0); - clean = 0; - } - listener.point(λ0 = λ1, φ0 = φ1); - sλ0 = sλ1; - }, - lineEnd: function() { - listener.lineEnd(); - λ0 = φ0 = NaN; - }, - clean: function() { - return 2 - clean; - } - }; + function d3_geo_cartesianCross(a, b) { + return [ a[1] * b[2] - a[2] * b[1], a[2] * b[0] - a[0] * b[2], a[0] * b[1] - a[1] * b[0] ]; } - function d3_geo_clipAntimeridianIntersect(λ0, φ0, λ1, φ1) { - var cosφ0, cosφ1, sinλ0_λ1 = Math.sin(λ0 - λ1); - return Math.abs(sinλ0_λ1) > ε ? Math.atan((Math.sin(φ0) * (cosφ1 = Math.cos(φ1)) * Math.sin(λ1) - Math.sin(φ1) * (cosφ0 = Math.cos(φ0)) * Math.sin(λ0)) / (cosφ0 * cosφ1 * sinλ0_λ1)) : (φ0 + φ1) / 2; + function d3_geo_cartesianAdd(a, b) { + a[0] += b[0]; + a[1] += b[1]; + a[2] += b[2]; } - function d3_geo_clipAntimeridianInterpolate(from, to, direction, listener) { - var φ; - if (from == null) { - φ = direction * halfÏ€; - listener.point(-Ï€, φ); - listener.point(0, φ); - listener.point(Ï€, φ); - listener.point(Ï€, 0); - listener.point(Ï€, -φ); - listener.point(0, -φ); - listener.point(-Ï€, -φ); - listener.point(-Ï€, 0); - listener.point(-Ï€, φ); - } else if (Math.abs(from[0] - to[0]) > ε) { - var s = (from[0] < to[0] ? 1 : -1) * Ï€; - φ = direction * s / 2; - listener.point(-s, φ); - listener.point(0, φ); - listener.point(s, φ); - } else { - listener.point(to[0], to[1]); - } + function d3_geo_cartesianScale(vector, k) { + return [ vector[0] * k, vector[1] * k, vector[2] * k ]; } - function d3_geo_clipCircle(radius) { - var cr = Math.cos(radius), smallRadius = cr > 0, notHemisphere = Math.abs(cr) > ε, interpolate = d3_geo_circleInterpolate(radius, 6 * d3_radians); - return d3_geo_clip(visible, clipLine, interpolate, smallRadius ? [ 0, -radius ] : [ -Ï€, radius - Ï€ ]); - function visible(λ, φ) { - return Math.cos(λ) * Math.cos(φ) > cr; + function d3_geo_cartesianNormalize(d) { + var l = Math.sqrt(d[0] * d[0] + d[1] * d[1] + d[2] * d[2]); + d[0] /= l; + d[1] /= l; + d[2] /= l; + } + function d3_geo_spherical(cartesian) { + return [ Math.atan2(cartesian[1], cartesian[0]), d3_asin(cartesian[2]) ]; + } + function d3_geo_sphericalEqual(a, b) { + return abs(a[0] - b[0]) < ε && abs(a[1] - b[1]) < ε; + } + d3.geo.bounds = function() { + var λ0, φ0, λ1, φ1, λ_, λ__, φ__, p0, dλSum, ranges, range; + var bound = { + point: point, + lineStart: lineStart, + lineEnd: lineEnd, + polygonStart: function() { + bound.point = ringPoint; + bound.lineStart = ringStart; + bound.lineEnd = ringEnd; + dλSum = 0; + d3_geo_area.polygonStart(); + }, + polygonEnd: function() { + d3_geo_area.polygonEnd(); + bound.point = point; + bound.lineStart = lineStart; + bound.lineEnd = lineEnd; + if (d3_geo_areaRingSum < 0) λ0 = -(λ1 = 180), φ0 = -(φ1 = 90); else if (dλSum > ε) φ1 = 90; else if (dλSum < -ε) φ0 = -90; + range[0] = λ0, range[1] = λ1; + } + }; + function point(λ, φ) { + ranges.push(range = [ λ0 = λ, λ1 = λ ]); + if (φ < φ0) φ0 = φ; + if (φ > φ1) φ1 = φ; } - function clipLine(listener) { - var point0, c0, v0, v00, clean; - return { - lineStart: function() { - v00 = v0 = false; - clean = 1; - }, - point: function(λ, φ) { - var point1 = [ λ, φ ], point2, v = visible(λ, φ), c = smallRadius ? v ? 0 : code(λ, φ) : v ? code(λ + (λ < 0 ? Ï€ : -Ï€), φ) : 0; - if (!point0 && (v00 = v0 = v)) listener.lineStart(); - if (v !== v0) { - point2 = intersect(point0, point1); - if (d3_geo_sphericalEqual(point0, point2) || d3_geo_sphericalEqual(point1, point2)) { - point1[0] += ε; - point1[1] += ε; - v = visible(point1[0], point1[1]); - } + function linePoint(λ, φ) { + var p = d3_geo_cartesian([ λ * d3_radians, φ * d3_radians ]); + if (p0) { + var normal = d3_geo_cartesianCross(p0, p), equatorial = [ normal[1], -normal[0], 0 ], inflection = d3_geo_cartesianCross(equatorial, normal); + d3_geo_cartesianNormalize(inflection); + inflection = d3_geo_spherical(inflection); + var dλ = λ - λ_, s = dλ > 0 ? 1 : -1, λi = inflection[0] * d3_degrees * s, antimeridian = abs(dλ) > 180; + if (antimeridian ^ (s * λ_ < λi && λi < s * λ)) { + var φi = inflection[1] * d3_degrees; + if (φi > φ1) φ1 = φi; + } else if (λi = (λi + 360) % 360 - 180, antimeridian ^ (s * λ_ < λi && λi < s * λ)) { + var φi = -inflection[1] * d3_degrees; + if (φi < φ0) φ0 = φi; + } else { + if (φ < φ0) φ0 = φ; + if (φ > φ1) φ1 = φ; + } + if (antimeridian) { + if (λ < λ_) { + if (angle(λ0, λ) > angle(λ0, λ1)) λ1 = λ; + } else { + if (angle(λ, λ1) > angle(λ0, λ1)) λ0 = λ; } - if (v !== v0) { - clean = 0; - if (v) { - listener.lineStart(); - point2 = intersect(point1, point0); - listener.point(point2[0], point2[1]); + } else { + if (λ1 >= λ0) { + if (λ < λ0) λ0 = λ; + if (λ > λ1) λ1 = λ; + } else { + if (λ > λ_) { + if (angle(λ0, λ) > angle(λ0, λ1)) λ1 = λ; } else { - point2 = intersect(point0, point1); - listener.point(point2[0], point2[1]); - listener.lineEnd(); - } - point0 = point2; - } else if (notHemisphere && point0 && smallRadius ^ v) { - var t; - if (!(c & c0) && (t = intersect(point1, point0, true))) { - clean = 0; - if (smallRadius) { - listener.lineStart(); - listener.point(t[0][0], t[0][1]); - listener.point(t[1][0], t[1][1]); - listener.lineEnd(); - } else { - listener.point(t[1][0], t[1][1]); - listener.lineEnd(); - listener.lineStart(); - listener.point(t[0][0], t[0][1]); - } + if (angle(λ, λ1) > angle(λ0, λ1)) λ0 = λ; } } - if (v && (!point0 || !d3_geo_sphericalEqual(point0, point1))) { - listener.point(point1[0], point1[1]); - } - point0 = point1, v0 = v, c0 = c; - }, - lineEnd: function() { - if (v0) listener.lineEnd(); - point0 = null; - }, - clean: function() { - return clean | (v00 && v0) << 1; } - }; - } - function intersect(a, b, two) { - var pa = d3_geo_cartesian(a), pb = d3_geo_cartesian(b); - var n1 = [ 1, 0, 0 ], n2 = d3_geo_cartesianCross(pa, pb), n2n2 = d3_geo_cartesianDot(n2, n2), n1n2 = n2[0], determinant = n2n2 - n1n2 * n1n2; - if (!determinant) return !two && a; - var c1 = cr * n2n2 / determinant, c2 = -cr * n1n2 / determinant, n1xn2 = d3_geo_cartesianCross(n1, n2), A = d3_geo_cartesianScale(n1, c1), B = d3_geo_cartesianScale(n2, c2); - d3_geo_cartesianAdd(A, B); - var u = n1xn2, w = d3_geo_cartesianDot(A, u), uu = d3_geo_cartesianDot(u, u), t2 = w * w - uu * (d3_geo_cartesianDot(A, A) - 1); - if (t2 < 0) return; - var t = Math.sqrt(t2), q = d3_geo_cartesianScale(u, (-w - t) / uu); - d3_geo_cartesianAdd(q, A); - q = d3_geo_spherical(q); - if (!two) return q; - var λ0 = a[0], λ1 = b[0], φ0 = a[1], φ1 = b[1], z; - if (λ1 < λ0) z = λ0, λ0 = λ1, λ1 = z; - var δλ = λ1 - λ0, polar = Math.abs(δλ - Ï€) < ε, meridian = polar || δλ < ε; - if (!polar && φ1 < φ0) z = φ0, φ0 = φ1, φ1 = z; - if (meridian ? polar ? φ0 + φ1 > 0 ^ q[1] < (Math.abs(q[0] - λ0) < ε ? φ0 : φ1) : φ0 <= q[1] && q[1] <= φ1 : δλ > Ï€ ^ (λ0 <= q[0] && q[0] <= λ1)) { - var q1 = d3_geo_cartesianScale(u, (-w + t) / uu); - d3_geo_cartesianAdd(q1, A); - return [ q, d3_geo_spherical(q1) ]; + } else { + point(λ, φ); } + p0 = p, λ_ = λ; } - function code(λ, φ) { - var r = smallRadius ? radius : Ï€ - radius, code = 0; - if (λ < -r) code |= 1; else if (λ > r) code |= 2; - if (φ < -r) code |= 4; else if (φ > r) code |= 8; - return code; + function lineStart() { + bound.point = linePoint; } - } - var d3_geo_clipExtentMAX = 1e9; - d3.geo.clipExtent = function() { - var x0, y0, x1, y1, stream, clip, clipExtent = { - stream: function(output) { - if (stream) stream.valid = false; - stream = clip(output); - stream.valid = true; - return stream; - }, - extent: function(_) { - if (!arguments.length) return [ [ x0, y0 ], [ x1, y1 ] ]; - clip = d3_geo_clipExtent(x0 = +_[0][0], y0 = +_[0][1], x1 = +_[1][0], y1 = +_[1][1]); - if (stream) stream.valid = false, stream = null; - return clipExtent; + function lineEnd() { + range[0] = λ0, range[1] = λ1; + bound.point = point; + p0 = null; + } + function ringPoint(λ, φ) { + if (p0) { + var dλ = λ - λ_; + dλSum += abs(dλ) > 180 ? dλ + (dλ > 0 ? 360 : -360) : dλ; + } else λ__ = λ, φ__ = φ; + d3_geo_area.point(λ, φ); + linePoint(λ, φ); + } + function ringStart() { + d3_geo_area.lineStart(); + } + function ringEnd() { + ringPoint(λ__, φ__); + d3_geo_area.lineEnd(); + if (abs(dλSum) > ε) λ0 = -(λ1 = 180); + range[0] = λ0, range[1] = λ1; + p0 = null; + } + function angle(λ0, λ1) { + return (λ1 -= λ0) < 0 ? λ1 + 360 : λ1; + } + function compareRanges(a, b) { + return a[0] - b[0]; + } + function withinRange(x, range) { + return range[0] <= range[1] ? range[0] <= x && x <= range[1] : x < range[0] || range[1] < x; + } + return function(feature) { + φ1 = λ1 = -(λ0 = φ0 = Infinity); + ranges = []; + d3.geo.stream(feature, bound); + var n = ranges.length; + if (n) { + ranges.sort(compareRanges); + for (var i = 1, a = ranges[0], b, merged = [ a ]; i < n; ++i) { + b = ranges[i]; + if (withinRange(b[0], a) || withinRange(b[1], a)) { + if (angle(a[0], b[1]) > angle(a[0], a[1])) a[1] = b[1]; + if (angle(b[0], a[1]) > angle(a[0], a[1])) a[0] = b[0]; + } else { + merged.push(a = b); + } + } + var best = -Infinity, dλ; + for (var n = merged.length - 1, i = 0, a = merged[n], b; i <= n; a = b, ++i) { + b = merged[i]; + if ((dλ = angle(a[1], b[0])) > best) best = dλ, λ0 = b[0], λ1 = a[1]; + } } + ranges = range = null; + return λ0 === Infinity || φ0 === Infinity ? [ [ NaN, NaN ], [ NaN, NaN ] ] : [ [ λ0, φ0 ], [ λ1, φ1 ] ]; }; - return clipExtent.extent([ [ 0, 0 ], [ 960, 500 ] ]); - }; - function d3_geo_clipExtent(x0, y0, x1, y1) { - return function(listener) { - var listener_ = listener, bufferListener = d3_geo_clipBufferListener(), segments, polygon, ring; - var clip = { - point: point, - lineStart: lineStart, - lineEnd: lineEnd, - polygonStart: function() { - listener = bufferListener; - segments = []; - polygon = []; - clean = true; + }(); + d3.geo.centroid = function(object) { + d3_geo_centroidW0 = d3_geo_centroidW1 = d3_geo_centroidX0 = d3_geo_centroidY0 = d3_geo_centroidZ0 = d3_geo_centroidX1 = d3_geo_centroidY1 = d3_geo_centroidZ1 = d3_geo_centroidX2 = d3_geo_centroidY2 = d3_geo_centroidZ2 = 0; + d3.geo.stream(object, d3_geo_centroid); + var x = d3_geo_centroidX2, y = d3_geo_centroidY2, z = d3_geo_centroidZ2, m = x * x + y * y + z * z; + if (m < ε2) { + x = d3_geo_centroidX1, y = d3_geo_centroidY1, z = d3_geo_centroidZ1; + if (d3_geo_centroidW1 < ε) x = d3_geo_centroidX0, y = d3_geo_centroidY0, z = d3_geo_centroidZ0; + m = x * x + y * y + z * z; + if (m < ε2) return [ NaN, NaN ]; + } + return [ Math.atan2(y, x) * d3_degrees, d3_asin(z / Math.sqrt(m)) * d3_degrees ]; + }; + var d3_geo_centroidW0, d3_geo_centroidW1, d3_geo_centroidX0, d3_geo_centroidY0, d3_geo_centroidZ0, d3_geo_centroidX1, d3_geo_centroidY1, d3_geo_centroidZ1, d3_geo_centroidX2, d3_geo_centroidY2, d3_geo_centroidZ2; + var d3_geo_centroid = { + sphere: d3_noop, + point: d3_geo_centroidPoint, + lineStart: d3_geo_centroidLineStart, + lineEnd: d3_geo_centroidLineEnd, + polygonStart: function() { + d3_geo_centroid.lineStart = d3_geo_centroidRingStart; + }, + polygonEnd: function() { + d3_geo_centroid.lineStart = d3_geo_centroidLineStart; + } + }; + function d3_geo_centroidPoint(λ, φ) { + λ *= d3_radians; + var cosφ = Math.cos(φ *= d3_radians); + d3_geo_centroidPointXYZ(cosφ * Math.cos(λ), cosφ * Math.sin(λ), Math.sin(φ)); + } + function d3_geo_centroidPointXYZ(x, y, z) { + ++d3_geo_centroidW0; + d3_geo_centroidX0 += (x - d3_geo_centroidX0) / d3_geo_centroidW0; + d3_geo_centroidY0 += (y - d3_geo_centroidY0) / d3_geo_centroidW0; + d3_geo_centroidZ0 += (z - d3_geo_centroidZ0) / d3_geo_centroidW0; + } + function d3_geo_centroidLineStart() { + var x0, y0, z0; + d3_geo_centroid.point = function(λ, φ) { + λ *= d3_radians; + var cosφ = Math.cos(φ *= d3_radians); + x0 = cosφ * Math.cos(λ); + y0 = cosφ * Math.sin(λ); + z0 = Math.sin(φ); + d3_geo_centroid.point = nextPoint; + d3_geo_centroidPointXYZ(x0, y0, z0); + }; + function nextPoint(λ, φ) { + λ *= d3_radians; + var cosφ = Math.cos(φ *= d3_radians), x = cosφ * Math.cos(λ), y = cosφ * Math.sin(λ), z = Math.sin(φ), w = Math.atan2(Math.sqrt((w = y0 * z - z0 * y) * w + (w = z0 * x - x0 * z) * w + (w = x0 * y - y0 * x) * w), x0 * x + y0 * y + z0 * z); + d3_geo_centroidW1 += w; + d3_geo_centroidX1 += w * (x0 + (x0 = x)); + d3_geo_centroidY1 += w * (y0 + (y0 = y)); + d3_geo_centroidZ1 += w * (z0 + (z0 = z)); + d3_geo_centroidPointXYZ(x0, y0, z0); + } + } + function d3_geo_centroidLineEnd() { + d3_geo_centroid.point = d3_geo_centroidPoint; + } + function d3_geo_centroidRingStart() { + var λ00, φ00, x0, y0, z0; + d3_geo_centroid.point = function(λ, φ) { + λ00 = λ, φ00 = φ; + d3_geo_centroid.point = nextPoint; + λ *= d3_radians; + var cosφ = Math.cos(φ *= d3_radians); + x0 = cosφ * Math.cos(λ); + y0 = cosφ * Math.sin(λ); + z0 = Math.sin(φ); + d3_geo_centroidPointXYZ(x0, y0, z0); + }; + d3_geo_centroid.lineEnd = function() { + nextPoint(λ00, φ00); + d3_geo_centroid.lineEnd = d3_geo_centroidLineEnd; + d3_geo_centroid.point = d3_geo_centroidPoint; + }; + function nextPoint(λ, φ) { + λ *= d3_radians; + var cosφ = Math.cos(φ *= d3_radians), x = cosφ * Math.cos(λ), y = cosφ * Math.sin(λ), z = Math.sin(φ), cx = y0 * z - z0 * y, cy = z0 * x - x0 * z, cz = x0 * y - y0 * x, m = Math.sqrt(cx * cx + cy * cy + cz * cz), u = x0 * x + y0 * y + z0 * z, v = m && -d3_acos(u) / m, w = Math.atan2(m, u); + d3_geo_centroidX2 += v * cx; + d3_geo_centroidY2 += v * cy; + d3_geo_centroidZ2 += v * cz; + d3_geo_centroidW1 += w; + d3_geo_centroidX1 += w * (x0 + (x0 = x)); + d3_geo_centroidY1 += w * (y0 + (y0 = y)); + d3_geo_centroidZ1 += w * (z0 + (z0 = z)); + d3_geo_centroidPointXYZ(x0, y0, z0); + } + } + function d3_true() { + return true; + } + function d3_geo_clipPolygon(segments, compare, clipStartInside, interpolate, listener) { + var subject = [], clip = []; + segments.forEach(function(segment) { + if ((n = segment.length - 1) <= 0) return; + var n, p0 = segment[0], p1 = segment[n]; + if (d3_geo_sphericalEqual(p0, p1)) { + listener.lineStart(); + for (var i = 0; i < n; ++i) listener.point((p0 = segment[i])[0], p0[1]); + listener.lineEnd(); + return; + } + var a = new d3_geo_clipPolygonIntersection(p0, segment, null, true), b = new d3_geo_clipPolygonIntersection(p0, null, a, false); + a.o = b; + subject.push(a); + clip.push(b); + a = new d3_geo_clipPolygonIntersection(p1, segment, null, false); + b = new d3_geo_clipPolygonIntersection(p1, null, a, true); + a.o = b; + subject.push(a); + clip.push(b); + }); + clip.sort(compare); + d3_geo_clipPolygonLinkCircular(subject); + d3_geo_clipPolygonLinkCircular(clip); + if (!subject.length) return; + for (var i = 0, entry = clipStartInside, n = clip.length; i < n; ++i) { + clip[i].e = entry = !entry; + } + var start = subject[0], points, point; + while (1) { + var current = start, isSubject = true; + while (current.v) if ((current = current.n) === start) return; + points = current.z; + listener.lineStart(); + do { + current.v = current.o.v = true; + if (current.e) { + if (isSubject) { + for (var i = 0, n = points.length; i < n; ++i) listener.point((point = points[i])[0], point[1]); + } else { + interpolate(current.x, current.n.x, 1, listener); + } + current = current.n; + } else { + if (isSubject) { + points = current.p.z; + for (var i = points.length - 1; i >= 0; --i) listener.point((point = points[i])[0], point[1]); + } else { + interpolate(current.x, current.p.x, -1, listener); + } + current = current.p; + } + current = current.o; + points = current.z; + isSubject = !isSubject; + } while (!current.v); + listener.lineEnd(); + } + } + function d3_geo_clipPolygonLinkCircular(array) { + if (!(n = array.length)) return; + var n, i = 0, a = array[0], b; + while (++i < n) { + a.n = b = array[i]; + b.p = a; + a = b; + } + a.n = b = array[0]; + b.p = a; + } + function d3_geo_clipPolygonIntersection(point, points, other, entry) { + this.x = point; + this.z = points; + this.o = other; + this.e = entry; + this.v = false; + this.n = this.p = null; + } + function d3_geo_clip(pointVisible, clipLine, interpolate, clipStart) { + return function(rotate, listener) { + var line = clipLine(listener), rotatedClipStart = rotate.invert(clipStart[0], clipStart[1]); + var clip = { + point: point, + lineStart: lineStart, + lineEnd: lineEnd, + polygonStart: function() { + clip.point = pointRing; + clip.lineStart = ringStart; + clip.lineEnd = ringEnd; + segments = []; + polygon = []; + listener.polygonStart(); }, polygonEnd: function() { - listener = listener_; + clip.point = point; + clip.lineStart = lineStart; + clip.lineEnd = lineEnd; segments = d3.merge(segments); - var clipStartInside = insidePolygon([ x0, y1 ]), inside = clean && clipStartInside, visible = segments.length; - if (inside || visible) { - listener.polygonStart(); - if (inside) { - listener.lineStart(); - interpolate(null, null, 1, listener); - listener.lineEnd(); - } - if (visible) { - d3_geo_clipPolygon(segments, compare, clipStartInside, interpolate, listener); - } - listener.polygonEnd(); + var clipStartInside = d3_geo_pointInPolygon(rotatedClipStart, polygon); + if (segments.length) { + d3_geo_clipPolygon(segments, d3_geo_clipSort, clipStartInside, interpolate, listener); + } else if (clipStartInside) { + listener.lineStart(); + interpolate(null, null, 1, listener); + listener.lineEnd(); } - segments = polygon = ring = null; + listener.polygonEnd(); + segments = polygon = null; + }, + sphere: function() { + listener.polygonStart(); + listener.lineStart(); + interpolate(null, null, 1, listener); + listener.lineEnd(); + listener.polygonEnd(); } }; - function insidePolygon(p) { - var wn = 0, n = polygon.length, y = p[1]; - for (var i = 0; i < n; ++i) { - for (var j = 1, v = polygon[i], m = v.length, a = v[0], b; j < m; ++j) { - b = v[j]; - if (a[1] <= y) { - if (b[1] > y && isLeft(a, b, p) > 0) ++wn; - } else { - if (b[1] <= y && isLeft(a, b, p) < 0) --wn; - } - a = b; - } - } - return wn !== 0; - } - function isLeft(a, b, c) { - return (b[0] - a[0]) * (c[1] - a[1]) - (c[0] - a[0]) * (b[1] - a[1]); - } - function interpolate(from, to, direction, listener) { - var a = 0, a1 = 0; - if (from == null || (a = corner(from, direction)) !== (a1 = corner(to, direction)) || comparePoints(from, to) < 0 ^ direction > 0) { - do { - listener.point(a === 0 || a === 3 ? x0 : x1, a > 1 ? y1 : y0); - } while ((a = (a + direction + 4) % 4) !== a1); - } else { - listener.point(to[0], to[1]); - } - } - function pointVisible(x, y) { - return x0 <= x && x <= x1 && y0 <= y && y <= y1; + function point(λ, φ) { + var point = rotate(λ, φ); + if (pointVisible(λ = point[0], φ = point[1])) listener.point(λ, φ); } - function point(x, y) { - if (pointVisible(x, y)) listener.point(x, y); + function pointLine(λ, φ) { + var point = rotate(λ, φ); + line.point(point[0], point[1]); } - var x__, y__, v__, x_, y_, v_, first, clean; function lineStart() { - clip.point = linePoint; - if (polygon) polygon.push(ring = []); - first = true; - v_ = false; - x_ = y_ = NaN; + clip.point = pointLine; + line.lineStart(); } function lineEnd() { - if (segments) { - linePoint(x__, y__); - if (v__ && v_) bufferListener.rejoin(); - segments.push(bufferListener.buffer()); - } clip.point = point; - if (v_) listener.lineEnd(); + line.lineEnd(); } - function linePoint(x, y) { - x = Math.max(-d3_geo_clipExtentMAX, Math.min(d3_geo_clipExtentMAX, x)); - y = Math.max(-d3_geo_clipExtentMAX, Math.min(d3_geo_clipExtentMAX, y)); - var v = pointVisible(x, y); - if (polygon) ring.push([ x, y ]); - if (first) { - x__ = x, y__ = y, v__ = v; - first = false; - if (v) { - listener.lineStart(); - listener.point(x, y); - } - } else { - if (v && v_) listener.point(x, y); else { - var a = [ x_, y_ ], b = [ x, y ]; - if (clipLine(a, b)) { - if (!v_) { - listener.lineStart(); - listener.point(a[0], a[1]); - } - listener.point(b[0], b[1]); - if (!v) listener.lineEnd(); - clean = false; - } else if (v) { - listener.lineStart(); - listener.point(x, y); - clean = false; - } - } + var segments; + var buffer = d3_geo_clipBufferListener(), ringListener = clipLine(buffer), polygon, ring; + function pointRing(λ, φ) { + ring.push([ λ, φ ]); + var point = rotate(λ, φ); + ringListener.point(point[0], point[1]); + } + function ringStart() { + ringListener.lineStart(); + ring = []; + } + function ringEnd() { + pointRing(ring[0][0], ring[0][1]); + ringListener.lineEnd(); + var clean = ringListener.clean(), ringSegments = buffer.buffer(), segment, n = ringSegments.length; + ring.pop(); + polygon.push(ring); + ring = null; + if (!n) return; + if (clean & 1) { + segment = ringSegments[0]; + var n = segment.length - 1, i = -1, point; + listener.lineStart(); + while (++i < n) listener.point((point = segment[i])[0], point[1]); + listener.lineEnd(); + return; } - x_ = x, y_ = y, v_ = v; + if (n > 1 && clean & 2) ringSegments.push(ringSegments.pop().concat(ringSegments.shift())); + segments.push(ringSegments.filter(d3_geo_clipSegmentLength1)); } return clip; }; - function corner(p, direction) { - return Math.abs(p[0] - x0) < ε ? direction > 0 ? 0 : 3 : Math.abs(p[0] - x1) < ε ? direction > 0 ? 2 : 1 : Math.abs(p[1] - y0) < ε ? direction > 0 ? 1 : 0 : direction > 0 ? 3 : 2; - } - function compare(a, b) { - return comparePoints(a.point, b.point); - } - function comparePoints(a, b) { - var ca = corner(a, 1), cb = corner(b, 1); - return ca !== cb ? ca - cb : ca === 0 ? b[1] - a[1] : ca === 1 ? a[0] - b[0] : ca === 2 ? a[1] - b[1] : b[0] - a[0]; - } - function clipLine(a, b) { - var dx = b[0] - a[0], dy = b[1] - a[1], t = [ 0, 1 ]; - if (Math.abs(dx) < ε && Math.abs(dy) < ε) return x0 <= a[0] && a[0] <= x1 && y0 <= a[1] && a[1] <= y1; - if (d3_geo_clipExtentT(x0 - a[0], dx, t) && d3_geo_clipExtentT(a[0] - x1, -dx, t) && d3_geo_clipExtentT(y0 - a[1], dy, t) && d3_geo_clipExtentT(a[1] - y1, -dy, t)) { - if (t[1] < 1) { - b[0] = a[0] + t[1] * dx; - b[1] = a[1] + t[1] * dy; - } - if (t[0] > 0) { - a[0] += t[0] * dx; - a[1] += t[0] * dy; - } - return true; + } + function d3_geo_clipSegmentLength1(segment) { + return segment.length > 1; + } + function d3_geo_clipBufferListener() { + var lines = [], line; + return { + lineStart: function() { + lines.push(line = []); + }, + point: function(λ, φ) { + line.push([ λ, φ ]); + }, + lineEnd: d3_noop, + buffer: function() { + var buffer = lines; + lines = []; + line = null; + return buffer; + }, + rejoin: function() { + if (lines.length > 1) lines.push(lines.pop().concat(lines.shift())); } - return false; - } + }; } - function d3_geo_clipExtentT(num, denominator, t) { - if (Math.abs(denominator) < ε) return num <= 0; - var u = num / denominator; - if (denominator > 0) { - if (u > t[1]) return false; - if (u > t[0]) t[0] = u; - } else { - if (u < t[0]) return false; - if (u < t[1]) t[1] = u; - } - return true; + function d3_geo_clipSort(a, b) { + return ((a = a.x)[0] < 0 ? a[1] - halfÏ€ - ε : halfÏ€ - a[1]) - ((b = b.x)[0] < 0 ? b[1] - halfÏ€ - ε : halfÏ€ - b[1]); } - function d3_geo_compose(a, b) { - function compose(x, y) { - return x = a(x, y), b(x[0], x[1]); + function d3_geo_pointInPolygon(point, polygon) { + var meridian = point[0], parallel = point[1], meridianNormal = [ Math.sin(meridian), -Math.cos(meridian), 0 ], polarAngle = 0, winding = 0; + d3_geo_areaRingSum.reset(); + for (var i = 0, n = polygon.length; i < n; ++i) { + var ring = polygon[i], m = ring.length; + if (!m) continue; + var point0 = ring[0], λ0 = point0[0], φ0 = point0[1] / 2 + Ï€ / 4, sinφ0 = Math.sin(φ0), cosφ0 = Math.cos(φ0), j = 1; + while (true) { + if (j === m) j = 0; + point = ring[j]; + var λ = point[0], φ = point[1] / 2 + Ï€ / 4, sinφ = Math.sin(φ), cosφ = Math.cos(φ), dλ = λ - λ0, antimeridian = abs(dλ) > Ï€, k = sinφ0 * sinφ; + d3_geo_areaRingSum.add(Math.atan2(k * Math.sin(dλ), cosφ0 * cosφ + k * Math.cos(dλ))); + polarAngle += antimeridian ? dλ + (dλ >= 0 ? Ï„ : -Ï„) : dλ; + if (antimeridian ^ λ0 >= meridian ^ λ >= meridian) { + var arc = d3_geo_cartesianCross(d3_geo_cartesian(point0), d3_geo_cartesian(point)); + d3_geo_cartesianNormalize(arc); + var intersection = d3_geo_cartesianCross(meridianNormal, arc); + d3_geo_cartesianNormalize(intersection); + var φarc = (antimeridian ^ dλ >= 0 ? -1 : 1) * d3_asin(intersection[2]); + if (parallel > φarc || parallel === φarc && (arc[0] || arc[1])) { + winding += antimeridian ^ dλ >= 0 ? 1 : -1; + } + } + if (!j++) break; + λ0 = λ, sinφ0 = sinφ, cosφ0 = cosφ, point0 = point; + } } - if (a.invert && b.invert) compose.invert = function(x, y) { - return x = b.invert(x, y), x && a.invert(x[0], x[1]); - }; - return compose; + return (polarAngle < -ε || polarAngle < ε && d3_geo_areaRingSum < 0) ^ winding & 1; } - function d3_geo_conic(projectAt) { - var φ0 = 0, φ1 = Ï€ / 3, m = d3_geo_projectionMutator(projectAt), p = m(φ0, φ1); - p.parallels = function(_) { - if (!arguments.length) return [ φ0 / Ï€ * 180, φ1 / Ï€ * 180 ]; - return m(φ0 = _[0] * Ï€ / 180, φ1 = _[1] * Ï€ / 180); + var d3_geo_clipAntimeridian = d3_geo_clip(d3_true, d3_geo_clipAntimeridianLine, d3_geo_clipAntimeridianInterpolate, [ -Ï€, -Ï€ / 2 ]); + function d3_geo_clipAntimeridianLine(listener) { + var λ0 = NaN, φ0 = NaN, sλ0 = NaN, clean; + return { + lineStart: function() { + listener.lineStart(); + clean = 1; + }, + point: function(λ1, φ1) { + var sλ1 = λ1 > 0 ? Ï€ : -Ï€, dλ = abs(λ1 - λ0); + if (abs(dλ - Ï€) < ε) { + listener.point(λ0, φ0 = (φ0 + φ1) / 2 > 0 ? halfÏ€ : -halfÏ€); + listener.point(sλ0, φ0); + listener.lineEnd(); + listener.lineStart(); + listener.point(sλ1, φ0); + listener.point(λ1, φ0); + clean = 0; + } else if (sλ0 !== sλ1 && dλ >= Ï€) { + if (abs(λ0 - sλ0) < ε) λ0 -= sλ0 * ε; + if (abs(λ1 - sλ1) < ε) λ1 -= sλ1 * ε; + φ0 = d3_geo_clipAntimeridianIntersect(λ0, φ0, λ1, φ1); + listener.point(sλ0, φ0); + listener.lineEnd(); + listener.lineStart(); + listener.point(sλ1, φ0); + clean = 0; + } + listener.point(λ0 = λ1, φ0 = φ1); + sλ0 = sλ1; + }, + lineEnd: function() { + listener.lineEnd(); + λ0 = φ0 = NaN; + }, + clean: function() { + return 2 - clean; + } }; - return p; } - function d3_geo_conicEqualArea(φ0, φ1) { - var sinφ0 = Math.sin(φ0), n = (sinφ0 + Math.sin(φ1)) / 2, C = 1 + sinφ0 * (2 * n - sinφ0), Ï0 = Math.sqrt(C) / n; - function forward(λ, φ) { - var Ï = Math.sqrt(C - 2 * n * Math.sin(φ)) / n; - return [ Ï * Math.sin(λ *= n), Ï0 - Ï * Math.cos(λ) ]; + function d3_geo_clipAntimeridianIntersect(λ0, φ0, λ1, φ1) { + var cosφ0, cosφ1, sinλ0_λ1 = Math.sin(λ0 - λ1); + return abs(sinλ0_λ1) > ε ? Math.atan((Math.sin(φ0) * (cosφ1 = Math.cos(φ1)) * Math.sin(λ1) - Math.sin(φ1) * (cosφ0 = Math.cos(φ0)) * Math.sin(λ0)) / (cosφ0 * cosφ1 * sinλ0_λ1)) : (φ0 + φ1) / 2; + } + function d3_geo_clipAntimeridianInterpolate(from, to, direction, listener) { + var φ; + if (from == null) { + φ = direction * halfÏ€; + listener.point(-Ï€, φ); + listener.point(0, φ); + listener.point(Ï€, φ); + listener.point(Ï€, 0); + listener.point(Ï€, -φ); + listener.point(0, -φ); + listener.point(-Ï€, -φ); + listener.point(-Ï€, 0); + listener.point(-Ï€, φ); + } else if (abs(from[0] - to[0]) > ε) { + var s = from[0] < to[0] ? Ï€ : -Ï€; + φ = direction * s / 2; + listener.point(-s, φ); + listener.point(0, φ); + listener.point(s, φ); + } else { + listener.point(to[0], to[1]); } - forward.invert = function(x, y) { - var Ï0_y = Ï0 - y; - return [ Math.atan2(x, Ï0_y) / n, d3_asin((C - (x * x + Ï0_y * Ï0_y) * n * n) / (2 * n)) ]; - }; - return forward; } - (d3.geo.conicEqualArea = function() { - return d3_geo_conic(d3_geo_conicEqualArea); - }).raw = d3_geo_conicEqualArea; - d3.geo.albers = function() { - return d3.geo.conicEqualArea().rotate([ 96, 0 ]).center([ -.6, 38.7 ]).parallels([ 29.5, 45.5 ]).scale(1070); - }; - d3.geo.albersUsa = function() { - var lower48 = d3.geo.albers(); - var alaska = d3.geo.conicEqualArea().rotate([ 154, 0 ]).center([ -2, 58.5 ]).parallels([ 55, 65 ]); - var hawaii = d3.geo.conicEqualArea().rotate([ 157, 0 ]).center([ -3, 19.9 ]).parallels([ 8, 18 ]); - var point, pointStream = { - point: function(x, y) { - point = [ x, y ]; - } - }, lower48Point, alaskaPoint, hawaiiPoint; - function albersUsa(coordinates) { - var x = coordinates[0], y = coordinates[1]; - point = null; - (lower48Point(x, y), point) || (alaskaPoint(x, y), point) || hawaiiPoint(x, y); - return point; + function d3_geo_clipCircle(radius) { + var cr = Math.cos(radius), smallRadius = cr > 0, notHemisphere = abs(cr) > ε, interpolate = d3_geo_circleInterpolate(radius, 6 * d3_radians); + return d3_geo_clip(visible, clipLine, interpolate, smallRadius ? [ 0, -radius ] : [ -Ï€, radius - Ï€ ]); + function visible(λ, φ) { + return Math.cos(λ) * Math.cos(φ) > cr; } - albersUsa.invert = function(coordinates) { - var k = lower48.scale(), t = lower48.translate(), x = (coordinates[0] - t[0]) / k, y = (coordinates[1] - t[1]) / k; - return (y >= .12 && y < .234 && x >= -.425 && x < -.214 ? alaska : y >= .166 && y < .234 && x >= -.214 && x < -.115 ? hawaii : lower48).invert(coordinates); - }; - albersUsa.stream = function(stream) { - var lower48Stream = lower48.stream(stream), alaskaStream = alaska.stream(stream), hawaiiStream = hawaii.stream(stream); + function clipLine(listener) { + var point0, c0, v0, v00, clean; return { - point: function(x, y) { - lower48Stream.point(x, y); - alaskaStream.point(x, y); - hawaiiStream.point(x, y); - }, - sphere: function() { - lower48Stream.sphere(); - alaskaStream.sphere(); - hawaiiStream.sphere(); - }, lineStart: function() { - lower48Stream.lineStart(); - alaskaStream.lineStart(); - hawaiiStream.lineStart(); - }, - lineEnd: function() { - lower48Stream.lineEnd(); - alaskaStream.lineEnd(); - hawaiiStream.lineEnd(); - }, - polygonStart: function() { - lower48Stream.polygonStart(); - alaskaStream.polygonStart(); - hawaiiStream.polygonStart(); + v00 = v0 = false; + clean = 1; }, - polygonEnd: function() { - lower48Stream.polygonEnd(); - alaskaStream.polygonEnd(); - hawaiiStream.polygonEnd(); - } - }; - }; - albersUsa.precision = function(_) { - if (!arguments.length) return lower48.precision(); - lower48.precision(_); - alaska.precision(_); - hawaii.precision(_); - return albersUsa; - }; - albersUsa.scale = function(_) { - if (!arguments.length) return lower48.scale(); - lower48.scale(_); - alaska.scale(_ * .35); - hawaii.scale(_); - return albersUsa.translate(lower48.translate()); - }; - albersUsa.translate = function(_) { - if (!arguments.length) return lower48.translate(); - var k = lower48.scale(), x = +_[0], y = +_[1]; - lower48Point = lower48.translate(_).clipExtent([ [ x - .455 * k, y - .238 * k ], [ x + .455 * k, y + .238 * k ] ]).stream(pointStream).point; - alaskaPoint = alaska.translate([ x - .307 * k, y + .201 * k ]).clipExtent([ [ x - .425 * k + ε, y + .12 * k + ε ], [ x - .214 * k - ε, y + .234 * k - ε ] ]).stream(pointStream).point; - hawaiiPoint = hawaii.translate([ x - .205 * k, y + .212 * k ]).clipExtent([ [ x - .214 * k + ε, y + .166 * k + ε ], [ x - .115 * k - ε, y + .234 * k - ε ] ]).stream(pointStream).point; - return albersUsa; - }; - return albersUsa.scale(1070); - }; - var d3_geo_pathAreaSum, d3_geo_pathAreaPolygon, d3_geo_pathArea = { - point: d3_noop, - lineStart: d3_noop, - lineEnd: d3_noop, - polygonStart: function() { - d3_geo_pathAreaPolygon = 0; - d3_geo_pathArea.lineStart = d3_geo_pathAreaRingStart; - }, - polygonEnd: function() { - d3_geo_pathArea.lineStart = d3_geo_pathArea.lineEnd = d3_geo_pathArea.point = d3_noop; - d3_geo_pathAreaSum += Math.abs(d3_geo_pathAreaPolygon / 2); - } - }; - function d3_geo_pathAreaRingStart() { - var x00, y00, x0, y0; - d3_geo_pathArea.point = function(x, y) { - d3_geo_pathArea.point = nextPoint; - x00 = x0 = x, y00 = y0 = y; - }; - function nextPoint(x, y) { - d3_geo_pathAreaPolygon += y0 * x - x0 * y; - x0 = x, y0 = y; - } - d3_geo_pathArea.lineEnd = function() { - nextPoint(x00, y00); - }; - } - var d3_geo_pathBoundsX0, d3_geo_pathBoundsY0, d3_geo_pathBoundsX1, d3_geo_pathBoundsY1; - var d3_geo_pathBounds = { - point: d3_geo_pathBoundsPoint, - lineStart: d3_noop, - lineEnd: d3_noop, - polygonStart: d3_noop, - polygonEnd: d3_noop - }; - function d3_geo_pathBoundsPoint(x, y) { - if (x < d3_geo_pathBoundsX0) d3_geo_pathBoundsX0 = x; - if (x > d3_geo_pathBoundsX1) d3_geo_pathBoundsX1 = x; - if (y < d3_geo_pathBoundsY0) d3_geo_pathBoundsY0 = y; - if (y > d3_geo_pathBoundsY1) d3_geo_pathBoundsY1 = y; - } - function d3_geo_pathBuffer() { - var pointCircle = d3_geo_pathBufferCircle(4.5), buffer = []; - var stream = { - point: point, - lineStart: function() { - stream.point = pointLineStart; - }, - lineEnd: lineEnd, - polygonStart: function() { - stream.lineEnd = lineEndPolygon; - }, - polygonEnd: function() { - stream.lineEnd = lineEnd; - stream.point = point; - }, - pointRadius: function(_) { - pointCircle = d3_geo_pathBufferCircle(_); - return stream; - }, - result: function() { - if (buffer.length) { - var result = buffer.join(""); - buffer = []; - return result; + point: function(λ, φ) { + var point1 = [ λ, φ ], point2, v = visible(λ, φ), c = smallRadius ? v ? 0 : code(λ, φ) : v ? code(λ + (λ < 0 ? Ï€ : -Ï€), φ) : 0; + if (!point0 && (v00 = v0 = v)) listener.lineStart(); + if (v !== v0) { + point2 = intersect(point0, point1); + if (d3_geo_sphericalEqual(point0, point2) || d3_geo_sphericalEqual(point1, point2)) { + point1[0] += ε; + point1[1] += ε; + v = visible(point1[0], point1[1]); + } + } + if (v !== v0) { + clean = 0; + if (v) { + listener.lineStart(); + point2 = intersect(point1, point0); + listener.point(point2[0], point2[1]); + } else { + point2 = intersect(point0, point1); + listener.point(point2[0], point2[1]); + listener.lineEnd(); + } + point0 = point2; + } else if (notHemisphere && point0 && smallRadius ^ v) { + var t; + if (!(c & c0) && (t = intersect(point1, point0, true))) { + clean = 0; + if (smallRadius) { + listener.lineStart(); + listener.point(t[0][0], t[0][1]); + listener.point(t[1][0], t[1][1]); + listener.lineEnd(); + } else { + listener.point(t[1][0], t[1][1]); + listener.lineEnd(); + listener.lineStart(); + listener.point(t[0][0], t[0][1]); + } + } + } + if (v && (!point0 || !d3_geo_sphericalEqual(point0, point1))) { + listener.point(point1[0], point1[1]); + } + point0 = point1, v0 = v, c0 = c; + }, + lineEnd: function() { + if (v0) listener.lineEnd(); + point0 = null; + }, + clean: function() { + return clean | (v00 && v0) << 1; } - } - }; - function point(x, y) { - buffer.push("M", x, ",", y, pointCircle); - } - function pointLineStart(x, y) { - buffer.push("M", x, ",", y); - stream.point = pointLine; - } - function pointLine(x, y) { - buffer.push("L", x, ",", y); - } - function lineEnd() { - stream.point = point; - } - function lineEndPolygon() { - buffer.push("Z"); + }; } - return stream; - } - function d3_geo_pathBufferCircle(radius) { - return "m0," + radius + "a" + radius + "," + radius + " 0 1,1 0," + -2 * radius + "a" + radius + "," + radius + " 0 1,1 0," + 2 * radius + "z"; - } - var d3_geo_pathCentroid = { - point: d3_geo_pathCentroidPoint, - lineStart: d3_geo_pathCentroidLineStart, - lineEnd: d3_geo_pathCentroidLineEnd, - polygonStart: function() { - d3_geo_pathCentroid.lineStart = d3_geo_pathCentroidRingStart; - }, - polygonEnd: function() { - d3_geo_pathCentroid.point = d3_geo_pathCentroidPoint; - d3_geo_pathCentroid.lineStart = d3_geo_pathCentroidLineStart; - d3_geo_pathCentroid.lineEnd = d3_geo_pathCentroidLineEnd; + function intersect(a, b, two) { + var pa = d3_geo_cartesian(a), pb = d3_geo_cartesian(b); + var n1 = [ 1, 0, 0 ], n2 = d3_geo_cartesianCross(pa, pb), n2n2 = d3_geo_cartesianDot(n2, n2), n1n2 = n2[0], determinant = n2n2 - n1n2 * n1n2; + if (!determinant) return !two && a; + var c1 = cr * n2n2 / determinant, c2 = -cr * n1n2 / determinant, n1xn2 = d3_geo_cartesianCross(n1, n2), A = d3_geo_cartesianScale(n1, c1), B = d3_geo_cartesianScale(n2, c2); + d3_geo_cartesianAdd(A, B); + var u = n1xn2, w = d3_geo_cartesianDot(A, u), uu = d3_geo_cartesianDot(u, u), t2 = w * w - uu * (d3_geo_cartesianDot(A, A) - 1); + if (t2 < 0) return; + var t = Math.sqrt(t2), q = d3_geo_cartesianScale(u, (-w - t) / uu); + d3_geo_cartesianAdd(q, A); + q = d3_geo_spherical(q); + if (!two) return q; + var λ0 = a[0], λ1 = b[0], φ0 = a[1], φ1 = b[1], z; + if (λ1 < λ0) z = λ0, λ0 = λ1, λ1 = z; + var δλ = λ1 - λ0, polar = abs(δλ - Ï€) < ε, meridian = polar || δλ < ε; + if (!polar && φ1 < φ0) z = φ0, φ0 = φ1, φ1 = z; + if (meridian ? polar ? φ0 + φ1 > 0 ^ q[1] < (abs(q[0] - λ0) < ε ? φ0 : φ1) : φ0 <= q[1] && q[1] <= φ1 : δλ > Ï€ ^ (λ0 <= q[0] && q[0] <= λ1)) { + var q1 = d3_geo_cartesianScale(u, (-w + t) / uu); + d3_geo_cartesianAdd(q1, A); + return [ q, d3_geo_spherical(q1) ]; + } } - }; - function d3_geo_pathCentroidPoint(x, y) { - d3_geo_centroidX0 += x; - d3_geo_centroidY0 += y; - ++d3_geo_centroidZ0; - } - function d3_geo_pathCentroidLineStart() { - var x0, y0; - d3_geo_pathCentroid.point = function(x, y) { - d3_geo_pathCentroid.point = nextPoint; - d3_geo_pathCentroidPoint(x0 = x, y0 = y); - }; - function nextPoint(x, y) { - var dx = x - x0, dy = y - y0, z = Math.sqrt(dx * dx + dy * dy); - d3_geo_centroidX1 += z * (x0 + x) / 2; - d3_geo_centroidY1 += z * (y0 + y) / 2; - d3_geo_centroidZ1 += z; - d3_geo_pathCentroidPoint(x0 = x, y0 = y); + function code(λ, φ) { + var r = smallRadius ? radius : Ï€ - radius, code = 0; + if (λ < -r) code |= 1; else if (λ > r) code |= 2; + if (φ < -r) code |= 4; else if (φ > r) code |= 8; + return code; } } - function d3_geo_pathCentroidLineEnd() { - d3_geo_pathCentroid.point = d3_geo_pathCentroidPoint; - } - function d3_geo_pathCentroidRingStart() { - var x00, y00, x0, y0; - d3_geo_pathCentroid.point = function(x, y) { - d3_geo_pathCentroid.point = nextPoint; - d3_geo_pathCentroidPoint(x00 = x0 = x, y00 = y0 = y); - }; - function nextPoint(x, y) { - var dx = x - x0, dy = y - y0, z = Math.sqrt(dx * dx + dy * dy); - d3_geo_centroidX1 += z * (x0 + x) / 2; - d3_geo_centroidY1 += z * (y0 + y) / 2; - d3_geo_centroidZ1 += z; - z = y0 * x - x0 * y; - d3_geo_centroidX2 += z * (x0 + x); - d3_geo_centroidY2 += z * (y0 + y); - d3_geo_centroidZ2 += z * 3; - d3_geo_pathCentroidPoint(x0 = x, y0 = y); - } - d3_geo_pathCentroid.lineEnd = function() { - nextPoint(x00, y00); + function d3_geom_clipLine(x0, y0, x1, y1) { + return function(line) { + var a = line.a, b = line.b, ax = a.x, ay = a.y, bx = b.x, by = b.y, t0 = 0, t1 = 1, dx = bx - ax, dy = by - ay, r; + r = x0 - ax; + if (!dx && r > 0) return; + r /= dx; + if (dx < 0) { + if (r < t0) return; + if (r < t1) t1 = r; + } else if (dx > 0) { + if (r > t1) return; + if (r > t0) t0 = r; + } + r = x1 - ax; + if (!dx && r < 0) return; + r /= dx; + if (dx < 0) { + if (r > t1) return; + if (r > t0) t0 = r; + } else if (dx > 0) { + if (r < t0) return; + if (r < t1) t1 = r; + } + r = y0 - ay; + if (!dy && r > 0) return; + r /= dy; + if (dy < 0) { + if (r < t0) return; + if (r < t1) t1 = r; + } else if (dy > 0) { + if (r > t1) return; + if (r > t0) t0 = r; + } + r = y1 - ay; + if (!dy && r < 0) return; + r /= dy; + if (dy < 0) { + if (r > t1) return; + if (r > t0) t0 = r; + } else if (dy > 0) { + if (r < t0) return; + if (r < t1) t1 = r; + } + if (t0 > 0) line.a = { + x: ax + t0 * dx, + y: ay + t0 * dy + }; + if (t1 < 1) line.b = { + x: ax + t1 * dx, + y: ay + t1 * dy + }; + return line; }; } - function d3_geo_pathContext(context) { - var pointRadius = 4.5; - var stream = { - point: point, - lineStart: function() { - stream.point = pointLineStart; - }, - lineEnd: lineEnd, - polygonStart: function() { - stream.lineEnd = lineEndPolygon; - }, - polygonEnd: function() { - stream.lineEnd = lineEnd; - stream.point = point; - }, - pointRadius: function(_) { - pointRadius = _; + var d3_geo_clipExtentMAX = 1e9; + d3.geo.clipExtent = function() { + var x0, y0, x1, y1, stream, clip, clipExtent = { + stream: function(output) { + if (stream) stream.valid = false; + stream = clip(output); + stream.valid = true; return stream; }, - result: d3_noop + extent: function(_) { + if (!arguments.length) return [ [ x0, y0 ], [ x1, y1 ] ]; + clip = d3_geo_clipExtent(x0 = +_[0][0], y0 = +_[0][1], x1 = +_[1][0], y1 = +_[1][1]); + if (stream) stream.valid = false, stream = null; + return clipExtent; + } }; - function point(x, y) { - context.moveTo(x, y); - context.arc(x, y, pointRadius, 0, Ï„); - } - function pointLineStart(x, y) { - context.moveTo(x, y); - stream.point = pointLine; - } - function pointLine(x, y) { - context.lineTo(x, y); - } - function lineEnd() { - stream.point = point; - } - function lineEndPolygon() { - context.closePath(); - } - return stream; - } - function d3_geo_resample(project) { - var δ2 = .5, cosMinDistance = Math.cos(30 * d3_radians), maxDepth = 16; - function resample(stream) { - var λ00, φ00, x00, y00, a00, b00, c00, λ0, x0, y0, a0, b0, c0; - var resample = { + return clipExtent.extent([ [ 0, 0 ], [ 960, 500 ] ]); + }; + function d3_geo_clipExtent(x0, y0, x1, y1) { + return function(listener) { + var listener_ = listener, bufferListener = d3_geo_clipBufferListener(), clipLine = d3_geom_clipLine(x0, y0, x1, y1), segments, polygon, ring; + var clip = { point: point, lineStart: lineStart, lineEnd: lineEnd, polygonStart: function() { - stream.polygonStart(); - resample.lineStart = ringStart; + listener = bufferListener; + segments = []; + polygon = []; + clean = true; }, polygonEnd: function() { - stream.polygonEnd(); - resample.lineStart = lineStart; + listener = listener_; + segments = d3.merge(segments); + var clipStartInside = insidePolygon([ x0, y1 ]), inside = clean && clipStartInside, visible = segments.length; + if (inside || visible) { + listener.polygonStart(); + if (inside) { + listener.lineStart(); + interpolate(null, null, 1, listener); + listener.lineEnd(); + } + if (visible) { + d3_geo_clipPolygon(segments, compare, clipStartInside, interpolate, listener); + } + listener.polygonEnd(); + } + segments = polygon = ring = null; } }; - function point(x, y) { - x = project(x, y); - stream.point(x[0], x[1]); - } - function lineStart() { - x0 = NaN; - resample.point = linePoint; - stream.lineStart(); + function insidePolygon(p) { + var wn = 0, n = polygon.length, y = p[1]; + for (var i = 0; i < n; ++i) { + for (var j = 1, v = polygon[i], m = v.length, a = v[0], b; j < m; ++j) { + b = v[j]; + if (a[1] <= y) { + if (b[1] > y && d3_cross2d(a, b, p) > 0) ++wn; + } else { + if (b[1] <= y && d3_cross2d(a, b, p) < 0) --wn; + } + a = b; + } + } + return wn !== 0; } - function linePoint(λ, φ) { - var c = d3_geo_cartesian([ λ, φ ]), p = project(λ, φ); - resampleLineTo(x0, y0, λ0, a0, b0, c0, x0 = p[0], y0 = p[1], λ0 = λ, a0 = c[0], b0 = c[1], c0 = c[2], maxDepth, stream); - stream.point(x0, y0); + function interpolate(from, to, direction, listener) { + var a = 0, a1 = 0; + if (from == null || (a = corner(from, direction)) !== (a1 = corner(to, direction)) || comparePoints(from, to) < 0 ^ direction > 0) { + do { + listener.point(a === 0 || a === 3 ? x0 : x1, a > 1 ? y1 : y0); + } while ((a = (a + direction + 4) % 4) !== a1); + } else { + listener.point(to[0], to[1]); + } } - function lineEnd() { - resample.point = point; - stream.lineEnd(); + function pointVisible(x, y) { + return x0 <= x && x <= x1 && y0 <= y && y <= y1; } - function ringStart() { - lineStart(); - resample.point = ringPoint; - resample.lineEnd = ringEnd; + function point(x, y) { + if (pointVisible(x, y)) listener.point(x, y); } - function ringPoint(λ, φ) { - linePoint(λ00 = λ, φ00 = φ), x00 = x0, y00 = y0, a00 = a0, b00 = b0, c00 = c0; - resample.point = linePoint; + var x__, y__, v__, x_, y_, v_, first, clean; + function lineStart() { + clip.point = linePoint; + if (polygon) polygon.push(ring = []); + first = true; + v_ = false; + x_ = y_ = NaN; } - function ringEnd() { - resampleLineTo(x0, y0, λ0, a0, b0, c0, x00, y00, λ00, a00, b00, c00, maxDepth, stream); - resample.lineEnd = lineEnd; - lineEnd(); + function lineEnd() { + if (segments) { + linePoint(x__, y__); + if (v__ && v_) bufferListener.rejoin(); + segments.push(bufferListener.buffer()); + } + clip.point = point; + if (v_) listener.lineEnd(); } - return resample; - } - function resampleLineTo(x0, y0, λ0, a0, b0, c0, x1, y1, λ1, a1, b1, c1, depth, stream) { - var dx = x1 - x0, dy = y1 - y0, d2 = dx * dx + dy * dy; - if (d2 > 4 * δ2 && depth--) { - var a = a0 + a1, b = b0 + b1, c = c0 + c1, m = Math.sqrt(a * a + b * b + c * c), φ2 = Math.asin(c /= m), λ2 = Math.abs(Math.abs(c) - 1) < ε ? (λ0 + λ1) / 2 : Math.atan2(b, a), p = project(λ2, φ2), x2 = p[0], y2 = p[1], dx2 = x2 - x0, dy2 = y2 - y0, dz = dy * dx2 - dx * dy2; - if (dz * dz / d2 > δ2 || Math.abs((dx * dx2 + dy * dy2) / d2 - .5) > .3 || a0 * a1 + b0 * b1 + c0 * c1 < cosMinDistance) { - resampleLineTo(x0, y0, λ0, a0, b0, c0, x2, y2, λ2, a /= m, b /= m, c, depth, stream); - stream.point(x2, y2); - resampleLineTo(x2, y2, λ2, a, b, c, x1, y1, λ1, a1, b1, c1, depth, stream); + function linePoint(x, y) { + x = Math.max(-d3_geo_clipExtentMAX, Math.min(d3_geo_clipExtentMAX, x)); + y = Math.max(-d3_geo_clipExtentMAX, Math.min(d3_geo_clipExtentMAX, y)); + var v = pointVisible(x, y); + if (polygon) ring.push([ x, y ]); + if (first) { + x__ = x, y__ = y, v__ = v; + first = false; + if (v) { + listener.lineStart(); + listener.point(x, y); + } + } else { + if (v && v_) listener.point(x, y); else { + var l = { + a: { + x: x_, + y: y_ + }, + b: { + x: x, + y: y + } + }; + if (clipLine(l)) { + if (!v_) { + listener.lineStart(); + listener.point(l.a.x, l.a.y); + } + listener.point(l.b.x, l.b.y); + if (!v) listener.lineEnd(); + clean = false; + } else if (v) { + listener.lineStart(); + listener.point(x, y); + clean = false; + } + } } + x_ = x, y_ = y, v_ = v; } + return clip; + }; + function corner(p, direction) { + return abs(p[0] - x0) < ε ? direction > 0 ? 0 : 3 : abs(p[0] - x1) < ε ? direction > 0 ? 2 : 1 : abs(p[1] - y0) < ε ? direction > 0 ? 1 : 0 : direction > 0 ? 3 : 2; } - resample.precision = function(_) { - if (!arguments.length) return Math.sqrt(δ2); - maxDepth = (δ2 = _ * _) > 0 && 16; - return resample; + function compare(a, b) { + return comparePoints(a.x, b.x); + } + function comparePoints(a, b) { + var ca = corner(a, 1), cb = corner(b, 1); + return ca !== cb ? ca - cb : ca === 0 ? b[1] - a[1] : ca === 1 ? a[0] - b[0] : ca === 2 ? a[1] - b[1] : b[0] - a[0]; + } + } + function d3_geo_compose(a, b) { + function compose(x, y) { + return x = a(x, y), b(x[0], x[1]); + } + if (a.invert && b.invert) compose.invert = function(x, y) { + return x = b.invert(x, y), x && a.invert(x[0], x[1]); }; - return resample; + return compose; } - d3.geo.transform = function(methods) { - return { - stream: function(stream) { - var transform = new d3_geo_transform(stream); - for (var k in methods) transform[k] = methods[k]; - return transform; - } + function d3_geo_conic(projectAt) { + var φ0 = 0, φ1 = Ï€ / 3, m = d3_geo_projectionMutator(projectAt), p = m(φ0, φ1); + p.parallels = function(_) { + if (!arguments.length) return [ φ0 / Ï€ * 180, φ1 / Ï€ * 180 ]; + return m(φ0 = _[0] * Ï€ / 180, φ1 = _[1] * Ï€ / 180); }; - }; - function d3_geo_transform(stream) { - this.stream = stream; + return p; } - d3_geo_transform.prototype = { - point: function(x, y) { - this.stream.point(x, y); - }, - sphere: function() { - this.stream.sphere(); - }, - lineStart: function() { - this.stream.lineStart(); - }, - lineEnd: function() { - this.stream.lineEnd(); - }, - polygonStart: function() { - this.stream.polygonStart(); - }, - polygonEnd: function() { - this.stream.polygonEnd(); + function d3_geo_conicEqualArea(φ0, φ1) { + var sinφ0 = Math.sin(φ0), n = (sinφ0 + Math.sin(φ1)) / 2, C = 1 + sinφ0 * (2 * n - sinφ0), Ï0 = Math.sqrt(C) / n; + function forward(λ, φ) { + var Ï = Math.sqrt(C - 2 * n * Math.sin(φ)) / n; + return [ Ï * Math.sin(λ *= n), Ï0 - Ï * Math.cos(λ) ]; } + forward.invert = function(x, y) { + var Ï0_y = Ï0 - y; + return [ Math.atan2(x, Ï0_y) / n, d3_asin((C - (x * x + Ï0_y * Ï0_y) * n * n) / (2 * n)) ]; + }; + return forward; + } + (d3.geo.conicEqualArea = function() { + return d3_geo_conic(d3_geo_conicEqualArea); + }).raw = d3_geo_conicEqualArea; + d3.geo.albers = function() { + return d3.geo.conicEqualArea().rotate([ 96, 0 ]).center([ -.6, 38.7 ]).parallels([ 29.5, 45.5 ]).scale(1070); }; - d3.geo.path = function() { - var pointRadius = 4.5, projection, context, projectStream, contextStream, cacheStream; - function path(object) { - if (object) { - if (typeof pointRadius === "function") contextStream.pointRadius(+pointRadius.apply(this, arguments)); - if (!cacheStream || !cacheStream.valid) cacheStream = projectStream(contextStream); - d3.geo.stream(object, cacheStream); + d3.geo.albersUsa = function() { + var lower48 = d3.geo.albers(); + var alaska = d3.geo.conicEqualArea().rotate([ 154, 0 ]).center([ -2, 58.5 ]).parallels([ 55, 65 ]); + var hawaii = d3.geo.conicEqualArea().rotate([ 157, 0 ]).center([ -3, 19.9 ]).parallels([ 8, 18 ]); + var point, pointStream = { + point: function(x, y) { + point = [ x, y ]; } - return contextStream.result(); + }, lower48Point, alaskaPoint, hawaiiPoint; + function albersUsa(coordinates) { + var x = coordinates[0], y = coordinates[1]; + point = null; + (lower48Point(x, y), point) || (alaskaPoint(x, y), point) || hawaiiPoint(x, y); + return point; } - path.area = function(object) { - d3_geo_pathAreaSum = 0; - d3.geo.stream(object, projectStream(d3_geo_pathArea)); - return d3_geo_pathAreaSum; + albersUsa.invert = function(coordinates) { + var k = lower48.scale(), t = lower48.translate(), x = (coordinates[0] - t[0]) / k, y = (coordinates[1] - t[1]) / k; + return (y >= .12 && y < .234 && x >= -.425 && x < -.214 ? alaska : y >= .166 && y < .234 && x >= -.214 && x < -.115 ? hawaii : lower48).invert(coordinates); }; - path.centroid = function(object) { - d3_geo_centroidX0 = d3_geo_centroidY0 = d3_geo_centroidZ0 = d3_geo_centroidX1 = d3_geo_centroidY1 = d3_geo_centroidZ1 = d3_geo_centroidX2 = d3_geo_centroidY2 = d3_geo_centroidZ2 = 0; - d3.geo.stream(object, projectStream(d3_geo_pathCentroid)); - return d3_geo_centroidZ2 ? [ d3_geo_centroidX2 / d3_geo_centroidZ2, d3_geo_centroidY2 / d3_geo_centroidZ2 ] : d3_geo_centroidZ1 ? [ d3_geo_centroidX1 / d3_geo_centroidZ1, d3_geo_centroidY1 / d3_geo_centroidZ1 ] : d3_geo_centroidZ0 ? [ d3_geo_centroidX0 / d3_geo_centroidZ0, d3_geo_centroidY0 / d3_geo_centroidZ0 ] : [ NaN, NaN ]; - }; - path.bounds = function(object) { - d3_geo_pathBoundsX1 = d3_geo_pathBoundsY1 = -(d3_geo_pathBoundsX0 = d3_geo_pathBoundsY0 = Infinity); - d3.geo.stream(object, projectStream(d3_geo_pathBounds)); - return [ [ d3_geo_pathBoundsX0, d3_geo_pathBoundsY0 ], [ d3_geo_pathBoundsX1, d3_geo_pathBoundsY1 ] ]; + albersUsa.stream = function(stream) { + var lower48Stream = lower48.stream(stream), alaskaStream = alaska.stream(stream), hawaiiStream = hawaii.stream(stream); + return { + point: function(x, y) { + lower48Stream.point(x, y); + alaskaStream.point(x, y); + hawaiiStream.point(x, y); + }, + sphere: function() { + lower48Stream.sphere(); + alaskaStream.sphere(); + hawaiiStream.sphere(); + }, + lineStart: function() { + lower48Stream.lineStart(); + alaskaStream.lineStart(); + hawaiiStream.lineStart(); + }, + lineEnd: function() { + lower48Stream.lineEnd(); + alaskaStream.lineEnd(); + hawaiiStream.lineEnd(); + }, + polygonStart: function() { + lower48Stream.polygonStart(); + alaskaStream.polygonStart(); + hawaiiStream.polygonStart(); + }, + polygonEnd: function() { + lower48Stream.polygonEnd(); + alaskaStream.polygonEnd(); + hawaiiStream.polygonEnd(); + } + }; }; - path.projection = function(_) { - if (!arguments.length) return projection; - projectStream = (projection = _) ? _.stream || d3_geo_pathProjectStream(_) : d3_identity; - return reset(); + albersUsa.precision = function(_) { + if (!arguments.length) return lower48.precision(); + lower48.precision(_); + alaska.precision(_); + hawaii.precision(_); + return albersUsa; }; - path.context = function(_) { - if (!arguments.length) return context; - contextStream = (context = _) == null ? new d3_geo_pathBuffer() : new d3_geo_pathContext(_); - if (typeof pointRadius !== "function") contextStream.pointRadius(pointRadius); - return reset(); + albersUsa.scale = function(_) { + if (!arguments.length) return lower48.scale(); + lower48.scale(_); + alaska.scale(_ * .35); + hawaii.scale(_); + return albersUsa.translate(lower48.translate()); }; - path.pointRadius = function(_) { - if (!arguments.length) return pointRadius; - pointRadius = typeof _ === "function" ? _ : (contextStream.pointRadius(+_), +_); - return path; + albersUsa.translate = function(_) { + if (!arguments.length) return lower48.translate(); + var k = lower48.scale(), x = +_[0], y = +_[1]; + lower48Point = lower48.translate(_).clipExtent([ [ x - .455 * k, y - .238 * k ], [ x + .455 * k, y + .238 * k ] ]).stream(pointStream).point; + alaskaPoint = alaska.translate([ x - .307 * k, y + .201 * k ]).clipExtent([ [ x - .425 * k + ε, y + .12 * k + ε ], [ x - .214 * k - ε, y + .234 * k - ε ] ]).stream(pointStream).point; + hawaiiPoint = hawaii.translate([ x - .205 * k, y + .212 * k ]).clipExtent([ [ x - .214 * k + ε, y + .166 * k + ε ], [ x - .115 * k - ε, y + .234 * k - ε ] ]).stream(pointStream).point; + return albersUsa; }; - function reset() { - cacheStream = null; - return path; + return albersUsa.scale(1070); + }; + var d3_geo_pathAreaSum, d3_geo_pathAreaPolygon, d3_geo_pathArea = { + point: d3_noop, + lineStart: d3_noop, + lineEnd: d3_noop, + polygonStart: function() { + d3_geo_pathAreaPolygon = 0; + d3_geo_pathArea.lineStart = d3_geo_pathAreaRingStart; + }, + polygonEnd: function() { + d3_geo_pathArea.lineStart = d3_geo_pathArea.lineEnd = d3_geo_pathArea.point = d3_noop; + d3_geo_pathAreaSum += abs(d3_geo_pathAreaPolygon / 2); } - return path.projection(d3.geo.albersUsa()).context(null); }; - function d3_geo_pathProjectStream(project) { - var resample = d3_geo_resample(function(x, y) { - return project([ x * d3_degrees, y * d3_degrees ]); - }); - return function(stream) { - var transform = new d3_geo_transform(stream = resample(stream)); - transform.point = function(x, y) { - stream.point(x * d3_radians, y * d3_radians); - }; - return transform; + function d3_geo_pathAreaRingStart() { + var x00, y00, x0, y0; + d3_geo_pathArea.point = function(x, y) { + d3_geo_pathArea.point = nextPoint; + x00 = x0 = x, y00 = y0 = y; + }; + function nextPoint(x, y) { + d3_geo_pathAreaPolygon += y0 * x - x0 * y; + x0 = x, y0 = y; + } + d3_geo_pathArea.lineEnd = function() { + nextPoint(x00, y00); }; } - d3.geo.projection = d3_geo_projection; - d3.geo.projectionMutator = d3_geo_projectionMutator; - function d3_geo_projection(project) { - return d3_geo_projectionMutator(function() { - return project; - })(); + var d3_geo_pathBoundsX0, d3_geo_pathBoundsY0, d3_geo_pathBoundsX1, d3_geo_pathBoundsY1; + var d3_geo_pathBounds = { + point: d3_geo_pathBoundsPoint, + lineStart: d3_noop, + lineEnd: d3_noop, + polygonStart: d3_noop, + polygonEnd: d3_noop + }; + function d3_geo_pathBoundsPoint(x, y) { + if (x < d3_geo_pathBoundsX0) d3_geo_pathBoundsX0 = x; + if (x > d3_geo_pathBoundsX1) d3_geo_pathBoundsX1 = x; + if (y < d3_geo_pathBoundsY0) d3_geo_pathBoundsY0 = y; + if (y > d3_geo_pathBoundsY1) d3_geo_pathBoundsY1 = y; } - function d3_geo_projectionMutator(projectAt) { - var project, rotate, projectRotate, projectResample = d3_geo_resample(function(x, y) { - x = project(x, y); - return [ x[0] * k + δx, δy - x[1] * k ]; - }), k = 150, x = 480, y = 250, λ = 0, φ = 0, δλ = 0, δφ = 0, δγ = 0, δx, δy, preclip = d3_geo_clipAntimeridian, postclip = d3_identity, clipAngle = null, clipExtent = null, stream; - function projection(point) { - point = projectRotate(point[0] * d3_radians, point[1] * d3_radians); - return [ point[0] * k + δx, δy - point[1] * k ]; + function d3_geo_pathBuffer() { + var pointCircle = d3_geo_pathBufferCircle(4.5), buffer = []; + var stream = { + point: point, + lineStart: function() { + stream.point = pointLineStart; + }, + lineEnd: lineEnd, + polygonStart: function() { + stream.lineEnd = lineEndPolygon; + }, + polygonEnd: function() { + stream.lineEnd = lineEnd; + stream.point = point; + }, + pointRadius: function(_) { + pointCircle = d3_geo_pathBufferCircle(_); + return stream; + }, + result: function() { + if (buffer.length) { + var result = buffer.join(""); + buffer = []; + return result; + } + } + }; + function point(x, y) { + buffer.push("M", x, ",", y, pointCircle); } - function invert(point) { - point = projectRotate.invert((point[0] - δx) / k, (δy - point[1]) / k); - return point && [ point[0] * d3_degrees, point[1] * d3_degrees ]; + function pointLineStart(x, y) { + buffer.push("M", x, ",", y); + stream.point = pointLine; } - projection.stream = function(output) { - if (stream) stream.valid = false; - stream = d3_geo_projectionRadians(preclip(rotate, projectResample(postclip(output)))); - stream.valid = true; - return stream; - }; - projection.clipAngle = function(_) { - if (!arguments.length) return clipAngle; - preclip = _ == null ? (clipAngle = _, d3_geo_clipAntimeridian) : d3_geo_clipCircle((clipAngle = +_) * d3_radians); - return invalidate(); - }; - projection.clipExtent = function(_) { - if (!arguments.length) return clipExtent; - clipExtent = _; - postclip = _ ? d3_geo_clipExtent(_[0][0], _[0][1], _[1][0], _[1][1]) : d3_identity; - return invalidate(); - }; - projection.scale = function(_) { - if (!arguments.length) return k; - k = +_; - return reset(); - }; - projection.translate = function(_) { - if (!arguments.length) return [ x, y ]; - x = +_[0]; - y = +_[1]; - return reset(); - }; - projection.center = function(_) { - if (!arguments.length) return [ λ * d3_degrees, φ * d3_degrees ]; - λ = _[0] % 360 * d3_radians; - φ = _[1] % 360 * d3_radians; - return reset(); - }; - projection.rotate = function(_) { - if (!arguments.length) return [ δλ * d3_degrees, δφ * d3_degrees, δγ * d3_degrees ]; - δλ = _[0] % 360 * d3_radians; - δφ = _[1] % 360 * d3_radians; - δγ = _.length > 2 ? _[2] % 360 * d3_radians : 0; - return reset(); - }; - d3.rebind(projection, projectResample, "precision"); - function reset() { - projectRotate = d3_geo_compose(rotate = d3_geo_rotation(δλ, δφ, δγ), project); - var center = project(λ, φ); - δx = x - center[0] * k; - δy = y + center[1] * k; - return invalidate(); + function pointLine(x, y) { + buffer.push("L", x, ",", y); } - function invalidate() { - if (stream) stream.valid = false, stream = null; - return projection; + function lineEnd() { + stream.point = point; } - return function() { - project = projectAt.apply(this, arguments); - projection.invert = project.invert && invert; - return reset(); - }; + function lineEndPolygon() { + buffer.push("Z"); + } + return stream; } - function d3_geo_projectionRadians(stream) { - var transform = new d3_geo_transform(stream); - transform.point = function(λ, φ) { - stream.point(λ * d3_radians, φ * d3_radians); - }; - return transform; + function d3_geo_pathBufferCircle(radius) { + return "m0," + radius + "a" + radius + "," + radius + " 0 1,1 0," + -2 * radius + "a" + radius + "," + radius + " 0 1,1 0," + 2 * radius + "z"; } - function d3_geo_equirectangular(λ, φ) { - return [ λ, φ ]; + var d3_geo_pathCentroid = { + point: d3_geo_pathCentroidPoint, + lineStart: d3_geo_pathCentroidLineStart, + lineEnd: d3_geo_pathCentroidLineEnd, + polygonStart: function() { + d3_geo_pathCentroid.lineStart = d3_geo_pathCentroidRingStart; + }, + polygonEnd: function() { + d3_geo_pathCentroid.point = d3_geo_pathCentroidPoint; + d3_geo_pathCentroid.lineStart = d3_geo_pathCentroidLineStart; + d3_geo_pathCentroid.lineEnd = d3_geo_pathCentroidLineEnd; + } + }; + function d3_geo_pathCentroidPoint(x, y) { + d3_geo_centroidX0 += x; + d3_geo_centroidY0 += y; + ++d3_geo_centroidZ0; } - (d3.geo.equirectangular = function() { - return d3_geo_projection(d3_geo_equirectangular); - }).raw = d3_geo_equirectangular.invert = d3_geo_equirectangular; - d3.geo.rotation = function(rotate) { - rotate = d3_geo_rotation(rotate[0] % 360 * d3_radians, rotate[1] * d3_radians, rotate.length > 2 ? rotate[2] * d3_radians : 0); - function forward(coordinates) { - coordinates = rotate(coordinates[0] * d3_radians, coordinates[1] * d3_radians); - return coordinates[0] *= d3_degrees, coordinates[1] *= d3_degrees, coordinates; - } - forward.invert = function(coordinates) { - coordinates = rotate.invert(coordinates[0] * d3_radians, coordinates[1] * d3_radians); - return coordinates[0] *= d3_degrees, coordinates[1] *= d3_degrees, coordinates; + function d3_geo_pathCentroidLineStart() { + var x0, y0; + d3_geo_pathCentroid.point = function(x, y) { + d3_geo_pathCentroid.point = nextPoint; + d3_geo_pathCentroidPoint(x0 = x, y0 = y); }; - return forward; - }; - function d3_geo_identityRotation(λ, φ) { - return [ λ > Ï€ ? λ - Ï„ : λ < -Ï€ ? λ + Ï„ : λ, φ ]; + function nextPoint(x, y) { + var dx = x - x0, dy = y - y0, z = Math.sqrt(dx * dx + dy * dy); + d3_geo_centroidX1 += z * (x0 + x) / 2; + d3_geo_centroidY1 += z * (y0 + y) / 2; + d3_geo_centroidZ1 += z; + d3_geo_pathCentroidPoint(x0 = x, y0 = y); + } } - d3_geo_identityRotation.invert = d3_geo_equirectangular; - function d3_geo_rotation(δλ, δφ, δγ) { - return δλ ? δφ || δγ ? d3_geo_compose(d3_geo_rotationλ(δλ), d3_geo_rotationφγ(δφ, δγ)) : d3_geo_rotationλ(δλ) : δφ || δγ ? d3_geo_rotationφγ(δφ, δγ) : d3_geo_identityRotation; + function d3_geo_pathCentroidLineEnd() { + d3_geo_pathCentroid.point = d3_geo_pathCentroidPoint; } - function d3_geo_forwardRotationλ(δλ) { - return function(λ, φ) { - return λ += δλ, [ λ > Ï€ ? λ - Ï„ : λ < -Ï€ ? λ + Ï„ : λ, φ ]; + function d3_geo_pathCentroidRingStart() { + var x00, y00, x0, y0; + d3_geo_pathCentroid.point = function(x, y) { + d3_geo_pathCentroid.point = nextPoint; + d3_geo_pathCentroidPoint(x00 = x0 = x, y00 = y0 = y); }; - } - function d3_geo_rotationλ(δλ) { - var rotation = d3_geo_forwardRotationλ(δλ); - rotation.invert = d3_geo_forwardRotationλ(-δλ); - return rotation; - } - function d3_geo_rotationφγ(δφ, δγ) { - var cosδφ = Math.cos(δφ), sinδφ = Math.sin(δφ), cosδγ = Math.cos(δγ), sinδγ = Math.sin(δγ); - function rotation(λ, φ) { - var cosφ = Math.cos(φ), x = Math.cos(λ) * cosφ, y = Math.sin(λ) * cosφ, z = Math.sin(φ), k = z * cosδφ + x * sinδφ; - return [ Math.atan2(y * cosδγ - k * sinδγ, x * cosδφ - z * sinδφ), d3_asin(k * cosδγ + y * sinδγ) ]; + function nextPoint(x, y) { + var dx = x - x0, dy = y - y0, z = Math.sqrt(dx * dx + dy * dy); + d3_geo_centroidX1 += z * (x0 + x) / 2; + d3_geo_centroidY1 += z * (y0 + y) / 2; + d3_geo_centroidZ1 += z; + z = y0 * x - x0 * y; + d3_geo_centroidX2 += z * (x0 + x); + d3_geo_centroidY2 += z * (y0 + y); + d3_geo_centroidZ2 += z * 3; + d3_geo_pathCentroidPoint(x0 = x, y0 = y); } - rotation.invert = function(λ, φ) { - var cosφ = Math.cos(φ), x = Math.cos(λ) * cosφ, y = Math.sin(λ) * cosφ, z = Math.sin(φ), k = z * cosδγ - y * sinδγ; - return [ Math.atan2(y * cosδγ + z * sinδγ, x * cosδφ + k * sinδφ), d3_asin(k * cosδφ - x * sinδφ) ]; + d3_geo_pathCentroid.lineEnd = function() { + nextPoint(x00, y00); }; - return rotation; } - d3.geo.circle = function() { - var origin = [ 0, 0 ], angle, precision = 6, interpolate; - function circle() { - var center = typeof origin === "function" ? origin.apply(this, arguments) : origin, rotate = d3_geo_rotation(-center[0] * d3_radians, -center[1] * d3_radians, 0).invert, ring = []; - interpolate(null, null, 1, { - point: function(x, y) { - ring.push(x = rotate(x, y)); - x[0] *= d3_degrees, x[1] *= d3_degrees; - } + function d3_geo_pathContext(context) { + var pointRadius = 4.5; + var stream = { + point: point, + lineStart: function() { + stream.point = pointLineStart; + }, + lineEnd: lineEnd, + polygonStart: function() { + stream.lineEnd = lineEndPolygon; + }, + polygonEnd: function() { + stream.lineEnd = lineEnd; + stream.point = point; + }, + pointRadius: function(_) { + pointRadius = _; + return stream; + }, + result: d3_noop + }; + function point(x, y) { + context.moveTo(x, y); + context.arc(x, y, pointRadius, 0, Ï„); + } + function pointLineStart(x, y) { + context.moveTo(x, y); + stream.point = pointLine; + } + function pointLine(x, y) { + context.lineTo(x, y); + } + function lineEnd() { + stream.point = point; + } + function lineEndPolygon() { + context.closePath(); + } + return stream; + } + function d3_geo_resample(project) { + var δ2 = .5, cosMinDistance = Math.cos(30 * d3_radians), maxDepth = 16; + function resample(stream) { + return (maxDepth ? resampleRecursive : resampleNone)(stream); + } + function resampleNone(stream) { + return d3_geo_transformPoint(stream, function(x, y) { + x = project(x, y); + stream.point(x[0], x[1]); }); - return { - type: "Polygon", - coordinates: [ ring ] - }; } - circle.origin = function(x) { - if (!arguments.length) return origin; - origin = x; - return circle; - }; - circle.angle = function(x) { - if (!arguments.length) return angle; - interpolate = d3_geo_circleInterpolate((angle = +x) * d3_radians, precision * d3_radians); - return circle; - }; - circle.precision = function(_) { - if (!arguments.length) return precision; - interpolate = d3_geo_circleInterpolate(angle * d3_radians, (precision = +_) * d3_radians); - return circle; - }; - return circle.angle(90); - }; - function d3_geo_circleInterpolate(radius, precision) { - var cr = Math.cos(radius), sr = Math.sin(radius); - return function(from, to, direction, listener) { - var step = direction * precision; - if (from != null) { - from = d3_geo_circleAngle(cr, from); - to = d3_geo_circleAngle(cr, to); - if (direction > 0 ? from < to : from > to) from += direction * Ï„; - } else { - from = radius + direction * Ï„; - to = radius - .5 * step; + function resampleRecursive(stream) { + var λ00, φ00, x00, y00, a00, b00, c00, λ0, x0, y0, a0, b0, c0; + var resample = { + point: point, + lineStart: lineStart, + lineEnd: lineEnd, + polygonStart: function() { + stream.polygonStart(); + resample.lineStart = ringStart; + }, + polygonEnd: function() { + stream.polygonEnd(); + resample.lineStart = lineStart; + } + }; + function point(x, y) { + x = project(x, y); + stream.point(x[0], x[1]); } - for (var point, t = from; direction > 0 ? t > to : t < to; t -= step) { - listener.point((point = d3_geo_spherical([ cr, -sr * Math.cos(t), -sr * Math.sin(t) ]))[0], point[1]); + function lineStart() { + x0 = NaN; + resample.point = linePoint; + stream.lineStart(); } - }; - } - function d3_geo_circleAngle(cr, point) { - var a = d3_geo_cartesian(point); - a[0] -= cr; - d3_geo_cartesianNormalize(a); - var angle = d3_acos(-a[1]); - return ((-a[2] < 0 ? -angle : angle) + 2 * Math.PI - ε) % (2 * Math.PI); - } - d3.geo.distance = function(a, b) { - var Δλ = (b[0] - a[0]) * d3_radians, φ0 = a[1] * d3_radians, φ1 = b[1] * d3_radians, sinΔλ = Math.sin(Δλ), cosΔλ = Math.cos(Δλ), sinφ0 = Math.sin(φ0), cosφ0 = Math.cos(φ0), sinφ1 = Math.sin(φ1), cosφ1 = Math.cos(φ1), t; - return Math.atan2(Math.sqrt((t = cosφ1 * sinΔλ) * t + (t = cosφ0 * sinφ1 - sinφ0 * cosφ1 * cosΔλ) * t), sinφ0 * sinφ1 + cosφ0 * cosφ1 * cosΔλ); - }; - d3.geo.graticule = function() { - var x1, x0, X1, X0, y1, y0, Y1, Y0, dx = 10, dy = dx, DX = 90, DY = 360, x, y, X, Y, precision = 2.5; - function graticule() { - return { - type: "MultiLineString", - coordinates: lines() - }; + function linePoint(λ, φ) { + var c = d3_geo_cartesian([ λ, φ ]), p = project(λ, φ); + resampleLineTo(x0, y0, λ0, a0, b0, c0, x0 = p[0], y0 = p[1], λ0 = λ, a0 = c[0], b0 = c[1], c0 = c[2], maxDepth, stream); + stream.point(x0, y0); + } + function lineEnd() { + resample.point = point; + stream.lineEnd(); + } + function ringStart() { + lineStart(); + resample.point = ringPoint; + resample.lineEnd = ringEnd; + } + function ringPoint(λ, φ) { + linePoint(λ00 = λ, φ00 = φ), x00 = x0, y00 = y0, a00 = a0, b00 = b0, c00 = c0; + resample.point = linePoint; + } + function ringEnd() { + resampleLineTo(x0, y0, λ0, a0, b0, c0, x00, y00, λ00, a00, b00, c00, maxDepth, stream); + resample.lineEnd = lineEnd; + lineEnd(); + } + return resample; } - function lines() { - return d3.range(Math.ceil(X0 / DX) * DX, X1, DX).map(X).concat(d3.range(Math.ceil(Y0 / DY) * DY, Y1, DY).map(Y)).concat(d3.range(Math.ceil(x0 / dx) * dx, x1, dx).filter(function(x) { - return Math.abs(x % DX) > ε; - }).map(x)).concat(d3.range(Math.ceil(y0 / dy) * dy, y1, dy).filter(function(y) { - return Math.abs(y % DY) > ε; - }).map(y)); + function resampleLineTo(x0, y0, λ0, a0, b0, c0, x1, y1, λ1, a1, b1, c1, depth, stream) { + var dx = x1 - x0, dy = y1 - y0, d2 = dx * dx + dy * dy; + if (d2 > 4 * δ2 && depth--) { + var a = a0 + a1, b = b0 + b1, c = c0 + c1, m = Math.sqrt(a * a + b * b + c * c), φ2 = Math.asin(c /= m), λ2 = abs(abs(c) - 1) < ε || abs(λ0 - λ1) < ε ? (λ0 + λ1) / 2 : Math.atan2(b, a), p = project(λ2, φ2), x2 = p[0], y2 = p[1], dx2 = x2 - x0, dy2 = y2 - y0, dz = dy * dx2 - dx * dy2; + if (dz * dz / d2 > δ2 || abs((dx * dx2 + dy * dy2) / d2 - .5) > .3 || a0 * a1 + b0 * b1 + c0 * c1 < cosMinDistance) { + resampleLineTo(x0, y0, λ0, a0, b0, c0, x2, y2, λ2, a /= m, b /= m, c, depth, stream); + stream.point(x2, y2); + resampleLineTo(x2, y2, λ2, a, b, c, x1, y1, λ1, a1, b1, c1, depth, stream); + } + } } - graticule.lines = function() { - return lines().map(function(coordinates) { - return { - type: "LineString", - coordinates: coordinates - }; - }); - }; - graticule.outline = function() { - return { - type: "Polygon", - coordinates: [ X(X0).concat(Y(Y1).slice(1), X(X1).reverse().slice(1), Y(Y0).reverse().slice(1)) ] - }; - }; - graticule.extent = function(_) { - if (!arguments.length) return graticule.minorExtent(); - return graticule.majorExtent(_).minorExtent(_); + resample.precision = function(_) { + if (!arguments.length) return Math.sqrt(δ2); + maxDepth = (δ2 = _ * _) > 0 && 16; + return resample; }; - graticule.majorExtent = function(_) { - if (!arguments.length) return [ [ X0, Y0 ], [ X1, Y1 ] ]; - X0 = +_[0][0], X1 = +_[1][0]; - Y0 = +_[0][1], Y1 = +_[1][1]; - if (X0 > X1) _ = X0, X0 = X1, X1 = _; - if (Y0 > Y1) _ = Y0, Y0 = Y1, Y1 = _; - return graticule.precision(precision); + return resample; + } + d3.geo.path = function() { + var pointRadius = 4.5, projection, context, projectStream, contextStream, cacheStream; + function path(object) { + if (object) { + if (typeof pointRadius === "function") contextStream.pointRadius(+pointRadius.apply(this, arguments)); + if (!cacheStream || !cacheStream.valid) cacheStream = projectStream(contextStream); + d3.geo.stream(object, cacheStream); + } + return contextStream.result(); + } + path.area = function(object) { + d3_geo_pathAreaSum = 0; + d3.geo.stream(object, projectStream(d3_geo_pathArea)); + return d3_geo_pathAreaSum; }; - graticule.minorExtent = function(_) { - if (!arguments.length) return [ [ x0, y0 ], [ x1, y1 ] ]; - x0 = +_[0][0], x1 = +_[1][0]; - y0 = +_[0][1], y1 = +_[1][1]; - if (x0 > x1) _ = x0, x0 = x1, x1 = _; - if (y0 > y1) _ = y0, y0 = y1, y1 = _; - return graticule.precision(precision); + path.centroid = function(object) { + d3_geo_centroidX0 = d3_geo_centroidY0 = d3_geo_centroidZ0 = d3_geo_centroidX1 = d3_geo_centroidY1 = d3_geo_centroidZ1 = d3_geo_centroidX2 = d3_geo_centroidY2 = d3_geo_centroidZ2 = 0; + d3.geo.stream(object, projectStream(d3_geo_pathCentroid)); + return d3_geo_centroidZ2 ? [ d3_geo_centroidX2 / d3_geo_centroidZ2, d3_geo_centroidY2 / d3_geo_centroidZ2 ] : d3_geo_centroidZ1 ? [ d3_geo_centroidX1 / d3_geo_centroidZ1, d3_geo_centroidY1 / d3_geo_centroidZ1 ] : d3_geo_centroidZ0 ? [ d3_geo_centroidX0 / d3_geo_centroidZ0, d3_geo_centroidY0 / d3_geo_centroidZ0 ] : [ NaN, NaN ]; }; - graticule.step = function(_) { - if (!arguments.length) return graticule.minorStep(); - return graticule.majorStep(_).minorStep(_); + path.bounds = function(object) { + d3_geo_pathBoundsX1 = d3_geo_pathBoundsY1 = -(d3_geo_pathBoundsX0 = d3_geo_pathBoundsY0 = Infinity); + d3.geo.stream(object, projectStream(d3_geo_pathBounds)); + return [ [ d3_geo_pathBoundsX0, d3_geo_pathBoundsY0 ], [ d3_geo_pathBoundsX1, d3_geo_pathBoundsY1 ] ]; }; - graticule.majorStep = function(_) { - if (!arguments.length) return [ DX, DY ]; - DX = +_[0], DY = +_[1]; - return graticule; + path.projection = function(_) { + if (!arguments.length) return projection; + projectStream = (projection = _) ? _.stream || d3_geo_pathProjectStream(_) : d3_identity; + return reset(); }; - graticule.minorStep = function(_) { - if (!arguments.length) return [ dx, dy ]; - dx = +_[0], dy = +_[1]; - return graticule; + path.context = function(_) { + if (!arguments.length) return context; + contextStream = (context = _) == null ? new d3_geo_pathBuffer() : new d3_geo_pathContext(_); + if (typeof pointRadius !== "function") contextStream.pointRadius(pointRadius); + return reset(); }; - graticule.precision = function(_) { - if (!arguments.length) return precision; - precision = +_; - x = d3_geo_graticuleX(y0, y1, 90); - y = d3_geo_graticuleY(x0, x1, precision); - X = d3_geo_graticuleX(Y0, Y1, 90); - Y = d3_geo_graticuleY(X0, X1, precision); - return graticule; + path.pointRadius = function(_) { + if (!arguments.length) return pointRadius; + pointRadius = typeof _ === "function" ? _ : (contextStream.pointRadius(+_), +_); + return path; }; - return graticule.majorExtent([ [ -180, -90 + ε ], [ 180, 90 - ε ] ]).minorExtent([ [ -180, -80 - ε ], [ 180, 80 + ε ] ]); + function reset() { + cacheStream = null; + return path; + } + return path.projection(d3.geo.albersUsa()).context(null); }; - function d3_geo_graticuleX(y0, y1, dy) { - var y = d3.range(y0, y1 - ε, dy).concat(y1); - return function(x) { - return y.map(function(y) { - return [ x, y ]; - }); + function d3_geo_pathProjectStream(project) { + var resample = d3_geo_resample(function(x, y) { + return project([ x * d3_degrees, y * d3_degrees ]); + }); + return function(stream) { + return d3_geo_projectionRadians(resample(stream)); }; } - function d3_geo_graticuleY(x0, x1, dx) { - var x = d3.range(x0, x1 - ε, dx).concat(x1); - return function(y) { - return x.map(function(x) { - return [ x, y ]; - }); + d3.geo.transform = function(methods) { + return { + stream: function(stream) { + var transform = new d3_geo_transform(stream); + for (var k in methods) transform[k] = methods[k]; + return transform; + } }; + }; + function d3_geo_transform(stream) { + this.stream = stream; } - function d3_source(d) { - return d.source; + d3_geo_transform.prototype = { + point: function(x, y) { + this.stream.point(x, y); + }, + sphere: function() { + this.stream.sphere(); + }, + lineStart: function() { + this.stream.lineStart(); + }, + lineEnd: function() { + this.stream.lineEnd(); + }, + polygonStart: function() { + this.stream.polygonStart(); + }, + polygonEnd: function() { + this.stream.polygonEnd(); + } + }; + function d3_geo_transformPoint(stream, point) { + return { + point: point, + sphere: function() { + stream.sphere(); + }, + lineStart: function() { + stream.lineStart(); + }, + lineEnd: function() { + stream.lineEnd(); + }, + polygonStart: function() { + stream.polygonStart(); + }, + polygonEnd: function() { + stream.polygonEnd(); + } + }; } - function d3_target(d) { - return d.target; + d3.geo.projection = d3_geo_projection; + d3.geo.projectionMutator = d3_geo_projectionMutator; + function d3_geo_projection(project) { + return d3_geo_projectionMutator(function() { + return project; + })(); } - d3.geo.greatArc = function() { - var source = d3_source, source_, target = d3_target, target_; - function greatArc() { - return { - type: "LineString", - coordinates: [ source_ || source.apply(this, arguments), target_ || target.apply(this, arguments) ] - }; + function d3_geo_projectionMutator(projectAt) { + var project, rotate, projectRotate, projectResample = d3_geo_resample(function(x, y) { + x = project(x, y); + return [ x[0] * k + δx, δy - x[1] * k ]; + }), k = 150, x = 480, y = 250, λ = 0, φ = 0, δλ = 0, δφ = 0, δγ = 0, δx, δy, preclip = d3_geo_clipAntimeridian, postclip = d3_identity, clipAngle = null, clipExtent = null, stream; + function projection(point) { + point = projectRotate(point[0] * d3_radians, point[1] * d3_radians); + return [ point[0] * k + δx, δy - point[1] * k ]; } - greatArc.distance = function() { - return d3.geo.distance(source_ || source.apply(this, arguments), target_ || target.apply(this, arguments)); + function invert(point) { + point = projectRotate.invert((point[0] - δx) / k, (δy - point[1]) / k); + return point && [ point[0] * d3_degrees, point[1] * d3_degrees ]; + } + projection.stream = function(output) { + if (stream) stream.valid = false; + stream = d3_geo_projectionRadians(preclip(rotate, projectResample(postclip(output)))); + stream.valid = true; + return stream; }; - greatArc.source = function(_) { - if (!arguments.length) return source; - source = _, source_ = typeof _ === "function" ? null : _; - return greatArc; + projection.clipAngle = function(_) { + if (!arguments.length) return clipAngle; + preclip = _ == null ? (clipAngle = _, d3_geo_clipAntimeridian) : d3_geo_clipCircle((clipAngle = +_) * d3_radians); + return invalidate(); }; - greatArc.target = function(_) { - if (!arguments.length) return target; - target = _, target_ = typeof _ === "function" ? null : _; - return greatArc; + projection.clipExtent = function(_) { + if (!arguments.length) return clipExtent; + clipExtent = _; + postclip = _ ? d3_geo_clipExtent(_[0][0], _[0][1], _[1][0], _[1][1]) : d3_identity; + return invalidate(); }; - greatArc.precision = function() { - return arguments.length ? greatArc : 0; + projection.scale = function(_) { + if (!arguments.length) return k; + k = +_; + return reset(); }; - return greatArc; - }; - d3.geo.interpolate = function(source, target) { - return d3_geo_interpolate(source[0] * d3_radians, source[1] * d3_radians, target[0] * d3_radians, target[1] * d3_radians); - }; - function d3_geo_interpolate(x0, y0, x1, y1) { - var cy0 = Math.cos(y0), sy0 = Math.sin(y0), cy1 = Math.cos(y1), sy1 = Math.sin(y1), kx0 = cy0 * Math.cos(x0), ky0 = cy0 * Math.sin(x0), kx1 = cy1 * Math.cos(x1), ky1 = cy1 * Math.sin(x1), d = 2 * Math.asin(Math.sqrt(d3_haversin(y1 - y0) + cy0 * cy1 * d3_haversin(x1 - x0))), k = 1 / Math.sin(d); - var interpolate = d ? function(t) { - var B = Math.sin(t *= d) * k, A = Math.sin(d - t) * k, x = A * kx0 + B * kx1, y = A * ky0 + B * ky1, z = A * sy0 + B * sy1; - return [ Math.atan2(y, x) * d3_degrees, Math.atan2(z, Math.sqrt(x * x + y * y)) * d3_degrees ]; - } : function() { - return [ x0 * d3_degrees, y0 * d3_degrees ]; + projection.translate = function(_) { + if (!arguments.length) return [ x, y ]; + x = +_[0]; + y = +_[1]; + return reset(); }; - interpolate.distance = d; - return interpolate; - } - d3.geo.length = function(object) { - d3_geo_lengthSum = 0; - d3.geo.stream(object, d3_geo_length); - return d3_geo_lengthSum; - }; - var d3_geo_lengthSum; - var d3_geo_length = { - sphere: d3_noop, - point: d3_noop, - lineStart: d3_geo_lengthLineStart, - lineEnd: d3_noop, - polygonStart: d3_noop, - polygonEnd: d3_noop - }; - function d3_geo_lengthLineStart() { - var λ0, sinφ0, cosφ0; - d3_geo_length.point = function(λ, φ) { - λ0 = λ * d3_radians, sinφ0 = Math.sin(φ *= d3_radians), cosφ0 = Math.cos(φ); - d3_geo_length.point = nextPoint; + projection.center = function(_) { + if (!arguments.length) return [ λ * d3_degrees, φ * d3_degrees ]; + λ = _[0] % 360 * d3_radians; + φ = _[1] % 360 * d3_radians; + return reset(); }; - d3_geo_length.lineEnd = function() { - d3_geo_length.point = d3_geo_length.lineEnd = d3_noop; + projection.rotate = function(_) { + if (!arguments.length) return [ δλ * d3_degrees, δφ * d3_degrees, δγ * d3_degrees ]; + δλ = _[0] % 360 * d3_radians; + δφ = _[1] % 360 * d3_radians; + δγ = _.length > 2 ? _[2] % 360 * d3_radians : 0; + return reset(); }; - function nextPoint(λ, φ) { - var sinφ = Math.sin(φ *= d3_radians), cosφ = Math.cos(φ), t = Math.abs((λ *= d3_radians) - λ0), cosΔλ = Math.cos(t); - d3_geo_lengthSum += Math.atan2(Math.sqrt((t = cosφ * Math.sin(t)) * t + (t = cosφ0 * sinφ - sinφ0 * cosφ * cosΔλ) * t), sinφ0 * sinφ + cosφ0 * cosφ * cosΔλ); - λ0 = λ, sinφ0 = sinφ, cosφ0 = cosφ; + d3.rebind(projection, projectResample, "precision"); + function reset() { + projectRotate = d3_geo_compose(rotate = d3_geo_rotation(δλ, δφ, δγ), project); + var center = project(λ, φ); + δx = x - center[0] * k; + δy = y + center[1] * k; + return invalidate(); } - } - function d3_geo_azimuthal(scale, angle) { - function azimuthal(λ, φ) { - var cosλ = Math.cos(λ), cosφ = Math.cos(φ), k = scale(cosλ * cosφ); - return [ k * cosφ * Math.sin(λ), k * Math.sin(φ) ]; + function invalidate() { + if (stream) stream.valid = false, stream = null; + return projection; } - azimuthal.invert = function(x, y) { - var Ï = Math.sqrt(x * x + y * y), c = angle(Ï), sinc = Math.sin(c), cosc = Math.cos(c); - return [ Math.atan2(x * sinc, Ï * cosc), Math.asin(Ï && y * sinc / Ï) ]; + return function() { + project = projectAt.apply(this, arguments); + projection.invert = project.invert && invert; + return reset(); }; - return azimuthal; } - var d3_geo_azimuthalEqualArea = d3_geo_azimuthal(function(cosλcosφ) { - return Math.sqrt(2 / (1 + cosλcosφ)); - }, function(Ï) { - return 2 * Math.asin(Ï / 2); - }); - (d3.geo.azimuthalEqualArea = function() { - return d3_geo_projection(d3_geo_azimuthalEqualArea); - }).raw = d3_geo_azimuthalEqualArea; - var d3_geo_azimuthalEquidistant = d3_geo_azimuthal(function(cosλcosφ) { - var c = Math.acos(cosλcosφ); - return c && c / Math.sin(c); - }, d3_identity); - (d3.geo.azimuthalEquidistant = function() { - return d3_geo_projection(d3_geo_azimuthalEquidistant); - }).raw = d3_geo_azimuthalEquidistant; - function d3_geo_conicConformal(φ0, φ1) { - var cosφ0 = Math.cos(φ0), t = function(φ) { - return Math.tan(Ï€ / 4 + φ / 2); - }, n = φ0 === φ1 ? Math.sin(φ0) : Math.log(cosφ0 / Math.cos(φ1)) / Math.log(t(φ1) / t(φ0)), F = cosφ0 * Math.pow(t(φ0), n) / n; - if (!n) return d3_geo_mercator; - function forward(λ, φ) { - var Ï = Math.abs(Math.abs(φ) - halfÏ€) < ε ? 0 : F / Math.pow(t(φ), n); - return [ Ï * Math.sin(n * λ), F - Ï * Math.cos(n * λ) ]; - } - forward.invert = function(x, y) { - var Ï0_y = F - y, Ï = d3_sgn(n) * Math.sqrt(x * x + Ï0_y * Ï0_y); - return [ Math.atan2(x, Ï0_y) / n, 2 * Math.atan(Math.pow(F / Ï, 1 / n)) - halfÏ€ ]; - }; - return forward; + function d3_geo_projectionRadians(stream) { + return d3_geo_transformPoint(stream, function(x, y) { + stream.point(x * d3_radians, y * d3_radians); + }); } - (d3.geo.conicConformal = function() { - return d3_geo_conic(d3_geo_conicConformal); - }).raw = d3_geo_conicConformal; - function d3_geo_conicEquidistant(φ0, φ1) { - var cosφ0 = Math.cos(φ0), n = φ0 === φ1 ? Math.sin(φ0) : (cosφ0 - Math.cos(φ1)) / (φ1 - φ0), G = cosφ0 / n + φ0; - if (Math.abs(n) < ε) return d3_geo_equirectangular; - function forward(λ, φ) { - var Ï = G - φ; - return [ Ï * Math.sin(n * λ), G - Ï * Math.cos(n * λ) ]; + function d3_geo_equirectangular(λ, φ) { + return [ λ, φ ]; + } + (d3.geo.equirectangular = function() { + return d3_geo_projection(d3_geo_equirectangular); + }).raw = d3_geo_equirectangular.invert = d3_geo_equirectangular; + d3.geo.rotation = function(rotate) { + rotate = d3_geo_rotation(rotate[0] % 360 * d3_radians, rotate[1] * d3_radians, rotate.length > 2 ? rotate[2] * d3_radians : 0); + function forward(coordinates) { + coordinates = rotate(coordinates[0] * d3_radians, coordinates[1] * d3_radians); + return coordinates[0] *= d3_degrees, coordinates[1] *= d3_degrees, coordinates; } - forward.invert = function(x, y) { - var Ï0_y = G - y; - return [ Math.atan2(x, Ï0_y) / n, G - d3_sgn(n) * Math.sqrt(x * x + Ï0_y * Ï0_y) ]; + forward.invert = function(coordinates) { + coordinates = rotate.invert(coordinates[0] * d3_radians, coordinates[1] * d3_radians); + return coordinates[0] *= d3_degrees, coordinates[1] *= d3_degrees, coordinates; }; return forward; + }; + function d3_geo_identityRotation(λ, φ) { + return [ λ > Ï€ ? λ - Ï„ : λ < -Ï€ ? λ + Ï„ : λ, φ ]; } - (d3.geo.conicEquidistant = function() { - return d3_geo_conic(d3_geo_conicEquidistant); - }).raw = d3_geo_conicEquidistant; - var d3_geo_gnomonic = d3_geo_azimuthal(function(cosλcosφ) { - return 1 / cosλcosφ; - }, Math.atan); - (d3.geo.gnomonic = function() { - return d3_geo_projection(d3_geo_gnomonic); - }).raw = d3_geo_gnomonic; - function d3_geo_mercator(λ, φ) { - return [ λ, Math.log(Math.tan(Ï€ / 4 + φ / 2)) ]; + d3_geo_identityRotation.invert = d3_geo_equirectangular; + function d3_geo_rotation(δλ, δφ, δγ) { + return δλ ? δφ || δγ ? d3_geo_compose(d3_geo_rotationλ(δλ), d3_geo_rotationφγ(δφ, δγ)) : d3_geo_rotationλ(δλ) : δφ || δγ ? d3_geo_rotationφγ(δφ, δγ) : d3_geo_identityRotation; } - d3_geo_mercator.invert = function(x, y) { - return [ x, 2 * Math.atan(Math.exp(y)) - halfÏ€ ]; - }; - function d3_geo_mercatorProjection(project) { - var m = d3_geo_projection(project), scale = m.scale, translate = m.translate, clipExtent = m.clipExtent, clipAuto; - m.scale = function() { - var v = scale.apply(m, arguments); - return v === m ? clipAuto ? m.clipExtent(null) : m : v; - }; - m.translate = function() { - var v = translate.apply(m, arguments); - return v === m ? clipAuto ? m.clipExtent(null) : m : v; - }; - m.clipExtent = function(_) { - var v = clipExtent.apply(m, arguments); - if (v === m) { - if (clipAuto = _ == null) { - var k = Ï€ * scale(), t = translate(); - clipExtent([ [ t[0] - k, t[1] - k ], [ t[0] + k, t[1] + k ] ]); - } - } else if (clipAuto) { - v = null; - } - return v; + function d3_geo_forwardRotationλ(δλ) { + return function(λ, φ) { + return λ += δλ, [ λ > Ï€ ? λ - Ï„ : λ < -Ï€ ? λ + Ï„ : λ, φ ]; }; - return m.clipExtent(null); } - (d3.geo.mercator = function() { - return d3_geo_mercatorProjection(d3_geo_mercator); - }).raw = d3_geo_mercator; - var d3_geo_orthographic = d3_geo_azimuthal(function() { - return 1; - }, Math.asin); - (d3.geo.orthographic = function() { - return d3_geo_projection(d3_geo_orthographic); - }).raw = d3_geo_orthographic; - var d3_geo_stereographic = d3_geo_azimuthal(function(cosλcosφ) { - return 1 / (1 + cosλcosφ); - }, function(Ï) { - return 2 * Math.atan(Ï); - }); - (d3.geo.stereographic = function() { - return d3_geo_projection(d3_geo_stereographic); - }).raw = d3_geo_stereographic; - function d3_geo_transverseMercator(λ, φ) { - var B = Math.cos(φ) * Math.sin(λ); - return [ Math.log((1 + B) / (1 - B)) / 2, Math.atan2(Math.tan(φ), Math.cos(λ)) ]; + function d3_geo_rotationλ(δλ) { + var rotation = d3_geo_forwardRotationλ(δλ); + rotation.invert = d3_geo_forwardRotationλ(-δλ); + return rotation; } - d3_geo_transverseMercator.invert = function(x, y) { - return [ Math.atan2(d3_sinh(x), Math.cos(y)), d3_asin(Math.sin(y) / d3_cosh(x)) ]; - }; - (d3.geo.transverseMercator = function() { - return d3_geo_mercatorProjection(d3_geo_transverseMercator); - }).raw = d3_geo_transverseMercator; - d3.geom = {}; - d3.svg = {}; - function d3_svg_line(projection) { - var x = d3_svg_lineX, y = d3_svg_lineY, defined = d3_true, interpolate = d3_svg_lineLinear, interpolateKey = interpolate.key, tension = .7; - function line(data) { - var segments = [], points = [], i = -1, n = data.length, d, fx = d3_functor(x), fy = d3_functor(y); - function segment() { - segments.push("M", interpolate(projection(points), tension)); - } - while (++i < n) { - if (defined.call(this, d = data[i], i)) { - points.push([ +fx.call(this, d, i), +fy.call(this, d, i) ]); - } else if (points.length) { - segment(); - points = []; - } - } - if (points.length) segment(); - return segments.length ? segments.join("") : null; + function d3_geo_rotationφγ(δφ, δγ) { + var cosδφ = Math.cos(δφ), sinδφ = Math.sin(δφ), cosδγ = Math.cos(δγ), sinδγ = Math.sin(δγ); + function rotation(λ, φ) { + var cosφ = Math.cos(φ), x = Math.cos(λ) * cosφ, y = Math.sin(λ) * cosφ, z = Math.sin(φ), k = z * cosδφ + x * sinδφ; + return [ Math.atan2(y * cosδγ - k * sinδγ, x * cosδφ - z * sinδφ), d3_asin(k * cosδγ + y * sinδγ) ]; } - line.x = function(_) { - if (!arguments.length) return x; - x = _; - return line; - }; - line.y = function(_) { - if (!arguments.length) return y; - y = _; - return line; + rotation.invert = function(λ, φ) { + var cosφ = Math.cos(φ), x = Math.cos(λ) * cosφ, y = Math.sin(λ) * cosφ, z = Math.sin(φ), k = z * cosδγ - y * sinδγ; + return [ Math.atan2(y * cosδγ + z * sinδγ, x * cosδφ + k * sinδφ), d3_asin(k * cosδφ - x * sinδφ) ]; }; - line.defined = function(_) { - if (!arguments.length) return defined; - defined = _; - return line; + return rotation; + } + d3.geo.circle = function() { + var origin = [ 0, 0 ], angle, precision = 6, interpolate; + function circle() { + var center = typeof origin === "function" ? origin.apply(this, arguments) : origin, rotate = d3_geo_rotation(-center[0] * d3_radians, -center[1] * d3_radians, 0).invert, ring = []; + interpolate(null, null, 1, { + point: function(x, y) { + ring.push(x = rotate(x, y)); + x[0] *= d3_degrees, x[1] *= d3_degrees; + } + }); + return { + type: "Polygon", + coordinates: [ ring ] + }; + } + circle.origin = function(x) { + if (!arguments.length) return origin; + origin = x; + return circle; }; - line.interpolate = function(_) { - if (!arguments.length) return interpolateKey; - if (typeof _ === "function") interpolateKey = interpolate = _; else interpolateKey = (interpolate = d3_svg_lineInterpolators.get(_) || d3_svg_lineLinear).key; - return line; + circle.angle = function(x) { + if (!arguments.length) return angle; + interpolate = d3_geo_circleInterpolate((angle = +x) * d3_radians, precision * d3_radians); + return circle; }; - line.tension = function(_) { - if (!arguments.length) return tension; - tension = _; - return line; + circle.precision = function(_) { + if (!arguments.length) return precision; + interpolate = d3_geo_circleInterpolate(angle * d3_radians, (precision = +_) * d3_radians); + return circle; }; - return line; - } - d3.svg.line = function() { - return d3_svg_line(d3_identity); + return circle.angle(90); }; - function d3_svg_lineX(d) { - return d[0]; + function d3_geo_circleInterpolate(radius, precision) { + var cr = Math.cos(radius), sr = Math.sin(radius); + return function(from, to, direction, listener) { + var step = direction * precision; + if (from != null) { + from = d3_geo_circleAngle(cr, from); + to = d3_geo_circleAngle(cr, to); + if (direction > 0 ? from < to : from > to) from += direction * Ï„; + } else { + from = radius + direction * Ï„; + to = radius - .5 * step; + } + for (var point, t = from; direction > 0 ? t > to : t < to; t -= step) { + listener.point((point = d3_geo_spherical([ cr, -sr * Math.cos(t), -sr * Math.sin(t) ]))[0], point[1]); + } + }; } - function d3_svg_lineY(d) { - return d[1]; + function d3_geo_circleAngle(cr, point) { + var a = d3_geo_cartesian(point); + a[0] -= cr; + d3_geo_cartesianNormalize(a); + var angle = d3_acos(-a[1]); + return ((-a[2] < 0 ? -angle : angle) + 2 * Math.PI - ε) % (2 * Math.PI); } - var d3_svg_lineInterpolators = d3.map({ - linear: d3_svg_lineLinear, - "linear-closed": d3_svg_lineLinearClosed, - step: d3_svg_lineStep, - "step-before": d3_svg_lineStepBefore, - "step-after": d3_svg_lineStepAfter, - basis: d3_svg_lineBasis, - "basis-open": d3_svg_lineBasisOpen, - "basis-closed": d3_svg_lineBasisClosed, - bundle: d3_svg_lineBundle, - cardinal: d3_svg_lineCardinal, - "cardinal-open": d3_svg_lineCardinalOpen, - "cardinal-closed": d3_svg_lineCardinalClosed, - monotone: d3_svg_lineMonotone - }); - d3_svg_lineInterpolators.forEach(function(key, value) { - value.key = key; - value.closed = /-closed$/.test(key); - }); - function d3_svg_lineLinear(points) { - return points.join("L"); - } - function d3_svg_lineLinearClosed(points) { - return d3_svg_lineLinear(points) + "Z"; - } - function d3_svg_lineStep(points) { - var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; - while (++i < n) path.push("H", (p[0] + (p = points[i])[0]) / 2, "V", p[1]); - if (n > 1) path.push("H", p[0]); - return path.join(""); - } - function d3_svg_lineStepBefore(points) { - var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; - while (++i < n) path.push("V", (p = points[i])[1], "H", p[0]); - return path.join(""); - } - function d3_svg_lineStepAfter(points) { - var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; - while (++i < n) path.push("H", (p = points[i])[0], "V", p[1]); - return path.join(""); + d3.geo.distance = function(a, b) { + var Δλ = (b[0] - a[0]) * d3_radians, φ0 = a[1] * d3_radians, φ1 = b[1] * d3_radians, sinΔλ = Math.sin(Δλ), cosΔλ = Math.cos(Δλ), sinφ0 = Math.sin(φ0), cosφ0 = Math.cos(φ0), sinφ1 = Math.sin(φ1), cosφ1 = Math.cos(φ1), t; + return Math.atan2(Math.sqrt((t = cosφ1 * sinΔλ) * t + (t = cosφ0 * sinφ1 - sinφ0 * cosφ1 * cosΔλ) * t), sinφ0 * sinφ1 + cosφ0 * cosφ1 * cosΔλ); + }; + d3.geo.graticule = function() { + var x1, x0, X1, X0, y1, y0, Y1, Y0, dx = 10, dy = dx, DX = 90, DY = 360, x, y, X, Y, precision = 2.5; + function graticule() { + return { + type: "MultiLineString", + coordinates: lines() + }; + } + function lines() { + return d3.range(Math.ceil(X0 / DX) * DX, X1, DX).map(X).concat(d3.range(Math.ceil(Y0 / DY) * DY, Y1, DY).map(Y)).concat(d3.range(Math.ceil(x0 / dx) * dx, x1, dx).filter(function(x) { + return abs(x % DX) > ε; + }).map(x)).concat(d3.range(Math.ceil(y0 / dy) * dy, y1, dy).filter(function(y) { + return abs(y % DY) > ε; + }).map(y)); + } + graticule.lines = function() { + return lines().map(function(coordinates) { + return { + type: "LineString", + coordinates: coordinates + }; + }); + }; + graticule.outline = function() { + return { + type: "Polygon", + coordinates: [ X(X0).concat(Y(Y1).slice(1), X(X1).reverse().slice(1), Y(Y0).reverse().slice(1)) ] + }; + }; + graticule.extent = function(_) { + if (!arguments.length) return graticule.minorExtent(); + return graticule.majorExtent(_).minorExtent(_); + }; + graticule.majorExtent = function(_) { + if (!arguments.length) return [ [ X0, Y0 ], [ X1, Y1 ] ]; + X0 = +_[0][0], X1 = +_[1][0]; + Y0 = +_[0][1], Y1 = +_[1][1]; + if (X0 > X1) _ = X0, X0 = X1, X1 = _; + if (Y0 > Y1) _ = Y0, Y0 = Y1, Y1 = _; + return graticule.precision(precision); + }; + graticule.minorExtent = function(_) { + if (!arguments.length) return [ [ x0, y0 ], [ x1, y1 ] ]; + x0 = +_[0][0], x1 = +_[1][0]; + y0 = +_[0][1], y1 = +_[1][1]; + if (x0 > x1) _ = x0, x0 = x1, x1 = _; + if (y0 > y1) _ = y0, y0 = y1, y1 = _; + return graticule.precision(precision); + }; + graticule.step = function(_) { + if (!arguments.length) return graticule.minorStep(); + return graticule.majorStep(_).minorStep(_); + }; + graticule.majorStep = function(_) { + if (!arguments.length) return [ DX, DY ]; + DX = +_[0], DY = +_[1]; + return graticule; + }; + graticule.minorStep = function(_) { + if (!arguments.length) return [ dx, dy ]; + dx = +_[0], dy = +_[1]; + return graticule; + }; + graticule.precision = function(_) { + if (!arguments.length) return precision; + precision = +_; + x = d3_geo_graticuleX(y0, y1, 90); + y = d3_geo_graticuleY(x0, x1, precision); + X = d3_geo_graticuleX(Y0, Y1, 90); + Y = d3_geo_graticuleY(X0, X1, precision); + return graticule; + }; + return graticule.majorExtent([ [ -180, -90 + ε ], [ 180, 90 - ε ] ]).minorExtent([ [ -180, -80 - ε ], [ 180, 80 + ε ] ]); + }; + function d3_geo_graticuleX(y0, y1, dy) { + var y = d3.range(y0, y1 - ε, dy).concat(y1); + return function(x) { + return y.map(function(y) { + return [ x, y ]; + }); + }; } - function d3_svg_lineCardinalOpen(points, tension) { - return points.length < 4 ? d3_svg_lineLinear(points) : points[1] + d3_svg_lineHermite(points.slice(1, points.length - 1), d3_svg_lineCardinalTangents(points, tension)); + function d3_geo_graticuleY(x0, x1, dx) { + var x = d3.range(x0, x1 - ε, dx).concat(x1); + return function(y) { + return x.map(function(x) { + return [ x, y ]; + }); + }; } - function d3_svg_lineCardinalClosed(points, tension) { - return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite((points.push(points[0]), - points), d3_svg_lineCardinalTangents([ points[points.length - 2] ].concat(points, [ points[1] ]), tension)); + function d3_source(d) { + return d.source; } - function d3_svg_lineCardinal(points, tension) { - return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite(points, d3_svg_lineCardinalTangents(points, tension)); + function d3_target(d) { + return d.target; } - function d3_svg_lineHermite(points, tangents) { - if (tangents.length < 1 || points.length != tangents.length && points.length != tangents.length + 2) { - return d3_svg_lineLinear(points); - } - var quad = points.length != tangents.length, path = "", p0 = points[0], p = points[1], t0 = tangents[0], t = t0, pi = 1; - if (quad) { - path += "Q" + (p[0] - t0[0] * 2 / 3) + "," + (p[1] - t0[1] * 2 / 3) + "," + p[0] + "," + p[1]; - p0 = points[1]; - pi = 2; - } - if (tangents.length > 1) { - t = tangents[1]; - p = points[pi]; - pi++; - path += "C" + (p0[0] + t0[0]) + "," + (p0[1] + t0[1]) + "," + (p[0] - t[0]) + "," + (p[1] - t[1]) + "," + p[0] + "," + p[1]; - for (var i = 2; i < tangents.length; i++, pi++) { - p = points[pi]; - t = tangents[i]; - path += "S" + (p[0] - t[0]) + "," + (p[1] - t[1]) + "," + p[0] + "," + p[1]; - } - } - if (quad) { - var lp = points[pi]; - path += "Q" + (p[0] + t[0] * 2 / 3) + "," + (p[1] + t[1] * 2 / 3) + "," + lp[0] + "," + lp[1]; + d3.geo.greatArc = function() { + var source = d3_source, source_, target = d3_target, target_; + function greatArc() { + return { + type: "LineString", + coordinates: [ source_ || source.apply(this, arguments), target_ || target.apply(this, arguments) ] + }; } - return path; + greatArc.distance = function() { + return d3.geo.distance(source_ || source.apply(this, arguments), target_ || target.apply(this, arguments)); + }; + greatArc.source = function(_) { + if (!arguments.length) return source; + source = _, source_ = typeof _ === "function" ? null : _; + return greatArc; + }; + greatArc.target = function(_) { + if (!arguments.length) return target; + target = _, target_ = typeof _ === "function" ? null : _; + return greatArc; + }; + greatArc.precision = function() { + return arguments.length ? greatArc : 0; + }; + return greatArc; + }; + d3.geo.interpolate = function(source, target) { + return d3_geo_interpolate(source[0] * d3_radians, source[1] * d3_radians, target[0] * d3_radians, target[1] * d3_radians); + }; + function d3_geo_interpolate(x0, y0, x1, y1) { + var cy0 = Math.cos(y0), sy0 = Math.sin(y0), cy1 = Math.cos(y1), sy1 = Math.sin(y1), kx0 = cy0 * Math.cos(x0), ky0 = cy0 * Math.sin(x0), kx1 = cy1 * Math.cos(x1), ky1 = cy1 * Math.sin(x1), d = 2 * Math.asin(Math.sqrt(d3_haversin(y1 - y0) + cy0 * cy1 * d3_haversin(x1 - x0))), k = 1 / Math.sin(d); + var interpolate = d ? function(t) { + var B = Math.sin(t *= d) * k, A = Math.sin(d - t) * k, x = A * kx0 + B * kx1, y = A * ky0 + B * ky1, z = A * sy0 + B * sy1; + return [ Math.atan2(y, x) * d3_degrees, Math.atan2(z, Math.sqrt(x * x + y * y)) * d3_degrees ]; + } : function() { + return [ x0 * d3_degrees, y0 * d3_degrees ]; + }; + interpolate.distance = d; + return interpolate; } - function d3_svg_lineCardinalTangents(points, tension) { - var tangents = [], a = (1 - tension) / 2, p0, p1 = points[0], p2 = points[1], i = 1, n = points.length; - while (++i < n) { - p0 = p1; - p1 = p2; - p2 = points[i]; - tangents.push([ a * (p2[0] - p0[0]), a * (p2[1] - p0[1]) ]); + d3.geo.length = function(object) { + d3_geo_lengthSum = 0; + d3.geo.stream(object, d3_geo_length); + return d3_geo_lengthSum; + }; + var d3_geo_lengthSum; + var d3_geo_length = { + sphere: d3_noop, + point: d3_noop, + lineStart: d3_geo_lengthLineStart, + lineEnd: d3_noop, + polygonStart: d3_noop, + polygonEnd: d3_noop + }; + function d3_geo_lengthLineStart() { + var λ0, sinφ0, cosφ0; + d3_geo_length.point = function(λ, φ) { + λ0 = λ * d3_radians, sinφ0 = Math.sin(φ *= d3_radians), cosφ0 = Math.cos(φ); + d3_geo_length.point = nextPoint; + }; + d3_geo_length.lineEnd = function() { + d3_geo_length.point = d3_geo_length.lineEnd = d3_noop; + }; + function nextPoint(λ, φ) { + var sinφ = Math.sin(φ *= d3_radians), cosφ = Math.cos(φ), t = abs((λ *= d3_radians) - λ0), cosΔλ = Math.cos(t); + d3_geo_lengthSum += Math.atan2(Math.sqrt((t = cosφ * Math.sin(t)) * t + (t = cosφ0 * sinφ - sinφ0 * cosφ * cosΔλ) * t), sinφ0 * sinφ + cosφ0 * cosφ * cosΔλ); + λ0 = λ, sinφ0 = sinφ, cosφ0 = cosφ; } - return tangents; } - function d3_svg_lineBasis(points) { - if (points.length < 3) return d3_svg_lineLinear(points); - var i = 1, n = points.length, pi = points[0], x0 = pi[0], y0 = pi[1], px = [ x0, x0, x0, (pi = points[1])[0] ], py = [ y0, y0, y0, pi[1] ], path = [ x0, ",", y0, "L", d3_svg_lineDot4(d3_svg_lineBasisBezier3, px), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, py) ]; - points.push(points[n - 1]); - while (++i <= n) { - pi = points[i]; - px.shift(); - px.push(pi[0]); - py.shift(); - py.push(pi[1]); - d3_svg_lineBasisBezier(path, px, py); + function d3_geo_azimuthal(scale, angle) { + function azimuthal(λ, φ) { + var cosλ = Math.cos(λ), cosφ = Math.cos(φ), k = scale(cosλ * cosφ); + return [ k * cosφ * Math.sin(λ), k * Math.sin(φ) ]; } - points.pop(); - path.push("L", pi); - return path.join(""); + azimuthal.invert = function(x, y) { + var Ï = Math.sqrt(x * x + y * y), c = angle(Ï), sinc = Math.sin(c), cosc = Math.cos(c); + return [ Math.atan2(x * sinc, Ï * cosc), Math.asin(Ï && y * sinc / Ï) ]; + }; + return azimuthal; } - function d3_svg_lineBasisOpen(points) { - if (points.length < 4) return d3_svg_lineLinear(points); - var path = [], i = -1, n = points.length, pi, px = [ 0 ], py = [ 0 ]; - while (++i < 3) { - pi = points[i]; - px.push(pi[0]); - py.push(pi[1]); - } - path.push(d3_svg_lineDot4(d3_svg_lineBasisBezier3, px) + "," + d3_svg_lineDot4(d3_svg_lineBasisBezier3, py)); - --i; - while (++i < n) { - pi = points[i]; - px.shift(); - px.push(pi[0]); - py.shift(); - py.push(pi[1]); - d3_svg_lineBasisBezier(path, px, py); - } - return path.join(""); - } - function d3_svg_lineBasisClosed(points) { - var path, i = -1, n = points.length, m = n + 4, pi, px = [], py = []; - while (++i < 4) { - pi = points[i % n]; - px.push(pi[0]); - py.push(pi[1]); - } - path = [ d3_svg_lineDot4(d3_svg_lineBasisBezier3, px), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, py) ]; - --i; - while (++i < m) { - pi = points[i % n]; - px.shift(); - px.push(pi[0]); - py.shift(); - py.push(pi[1]); - d3_svg_lineBasisBezier(path, px, py); + var d3_geo_azimuthalEqualArea = d3_geo_azimuthal(function(cosλcosφ) { + return Math.sqrt(2 / (1 + cosλcosφ)); + }, function(Ï) { + return 2 * Math.asin(Ï / 2); + }); + (d3.geo.azimuthalEqualArea = function() { + return d3_geo_projection(d3_geo_azimuthalEqualArea); + }).raw = d3_geo_azimuthalEqualArea; + var d3_geo_azimuthalEquidistant = d3_geo_azimuthal(function(cosλcosφ) { + var c = Math.acos(cosλcosφ); + return c && c / Math.sin(c); + }, d3_identity); + (d3.geo.azimuthalEquidistant = function() { + return d3_geo_projection(d3_geo_azimuthalEquidistant); + }).raw = d3_geo_azimuthalEquidistant; + function d3_geo_conicConformal(φ0, φ1) { + var cosφ0 = Math.cos(φ0), t = function(φ) { + return Math.tan(Ï€ / 4 + φ / 2); + }, n = φ0 === φ1 ? Math.sin(φ0) : Math.log(cosφ0 / Math.cos(φ1)) / Math.log(t(φ1) / t(φ0)), F = cosφ0 * Math.pow(t(φ0), n) / n; + if (!n) return d3_geo_mercator; + function forward(λ, φ) { + var Ï = abs(abs(φ) - halfÏ€) < ε ? 0 : F / Math.pow(t(φ), n); + return [ Ï * Math.sin(n * λ), F - Ï * Math.cos(n * λ) ]; } - return path.join(""); + forward.invert = function(x, y) { + var Ï0_y = F - y, Ï = d3_sgn(n) * Math.sqrt(x * x + Ï0_y * Ï0_y); + return [ Math.atan2(x, Ï0_y) / n, 2 * Math.atan(Math.pow(F / Ï, 1 / n)) - halfÏ€ ]; + }; + return forward; } - function d3_svg_lineBundle(points, tension) { - var n = points.length - 1; - if (n) { - var x0 = points[0][0], y0 = points[0][1], dx = points[n][0] - x0, dy = points[n][1] - y0, i = -1, p, t; - while (++i <= n) { - p = points[i]; - t = i / n; - p[0] = tension * p[0] + (1 - tension) * (x0 + t * dx); - p[1] = tension * p[1] + (1 - tension) * (y0 + t * dy); - } + (d3.geo.conicConformal = function() { + return d3_geo_conic(d3_geo_conicConformal); + }).raw = d3_geo_conicConformal; + function d3_geo_conicEquidistant(φ0, φ1) { + var cosφ0 = Math.cos(φ0), n = φ0 === φ1 ? Math.sin(φ0) : (cosφ0 - Math.cos(φ1)) / (φ1 - φ0), G = cosφ0 / n + φ0; + if (abs(n) < ε) return d3_geo_equirectangular; + function forward(λ, φ) { + var Ï = G - φ; + return [ Ï * Math.sin(n * λ), G - Ï * Math.cos(n * λ) ]; } - return d3_svg_lineBasis(points); - } - function d3_svg_lineDot4(a, b) { - return a[0] * b[0] + a[1] * b[1] + a[2] * b[2] + a[3] * b[3]; - } - var d3_svg_lineBasisBezier1 = [ 0, 2 / 3, 1 / 3, 0 ], d3_svg_lineBasisBezier2 = [ 0, 1 / 3, 2 / 3, 0 ], d3_svg_lineBasisBezier3 = [ 0, 1 / 6, 2 / 3, 1 / 6 ]; - function d3_svg_lineBasisBezier(path, x, y) { - path.push("C", d3_svg_lineDot4(d3_svg_lineBasisBezier1, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier1, y), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier2, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier2, y), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, y)); - } - function d3_svg_lineSlope(p0, p1) { - return (p1[1] - p0[1]) / (p1[0] - p0[0]); + forward.invert = function(x, y) { + var Ï0_y = G - y; + return [ Math.atan2(x, Ï0_y) / n, G - d3_sgn(n) * Math.sqrt(x * x + Ï0_y * Ï0_y) ]; + }; + return forward; } - function d3_svg_lineFiniteDifferences(points) { - var i = 0, j = points.length - 1, m = [], p0 = points[0], p1 = points[1], d = m[0] = d3_svg_lineSlope(p0, p1); - while (++i < j) { - m[i] = (d + (d = d3_svg_lineSlope(p0 = p1, p1 = points[i + 1]))) / 2; - } - m[i] = d; - return m; + (d3.geo.conicEquidistant = function() { + return d3_geo_conic(d3_geo_conicEquidistant); + }).raw = d3_geo_conicEquidistant; + var d3_geo_gnomonic = d3_geo_azimuthal(function(cosλcosφ) { + return 1 / cosλcosφ; + }, Math.atan); + (d3.geo.gnomonic = function() { + return d3_geo_projection(d3_geo_gnomonic); + }).raw = d3_geo_gnomonic; + function d3_geo_mercator(λ, φ) { + return [ λ, Math.log(Math.tan(Ï€ / 4 + φ / 2)) ]; } - function d3_svg_lineMonotoneTangents(points) { - var tangents = [], d, a, b, s, m = d3_svg_lineFiniteDifferences(points), i = -1, j = points.length - 1; - while (++i < j) { - d = d3_svg_lineSlope(points[i], points[i + 1]); - if (Math.abs(d) < ε) { - m[i] = m[i + 1] = 0; - } else { - a = m[i] / d; - b = m[i + 1] / d; - s = a * a + b * b; - if (s > 9) { - s = d * 3 / Math.sqrt(s); - m[i] = s * a; - m[i + 1] = s * b; + d3_geo_mercator.invert = function(x, y) { + return [ x, 2 * Math.atan(Math.exp(y)) - halfÏ€ ]; + }; + function d3_geo_mercatorProjection(project) { + var m = d3_geo_projection(project), scale = m.scale, translate = m.translate, clipExtent = m.clipExtent, clipAuto; + m.scale = function() { + var v = scale.apply(m, arguments); + return v === m ? clipAuto ? m.clipExtent(null) : m : v; + }; + m.translate = function() { + var v = translate.apply(m, arguments); + return v === m ? clipAuto ? m.clipExtent(null) : m : v; + }; + m.clipExtent = function(_) { + var v = clipExtent.apply(m, arguments); + if (v === m) { + if (clipAuto = _ == null) { + var k = Ï€ * scale(), t = translate(); + clipExtent([ [ t[0] - k, t[1] - k ], [ t[0] + k, t[1] + k ] ]); } + } else if (clipAuto) { + v = null; } - } - i = -1; - while (++i <= j) { - s = (points[Math.min(j, i + 1)][0] - points[Math.max(0, i - 1)][0]) / (6 * (1 + m[i] * m[i])); - tangents.push([ s || 0, m[i] * s || 0 ]); - } - return tangents; + return v; + }; + return m.clipExtent(null); } - function d3_svg_lineMonotone(points) { - return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite(points, d3_svg_lineMonotoneTangents(points)); + (d3.geo.mercator = function() { + return d3_geo_mercatorProjection(d3_geo_mercator); + }).raw = d3_geo_mercator; + var d3_geo_orthographic = d3_geo_azimuthal(function() { + return 1; + }, Math.asin); + (d3.geo.orthographic = function() { + return d3_geo_projection(d3_geo_orthographic); + }).raw = d3_geo_orthographic; + var d3_geo_stereographic = d3_geo_azimuthal(function(cosλcosφ) { + return 1 / (1 + cosλcosφ); + }, function(Ï) { + return 2 * Math.atan(Ï); + }); + (d3.geo.stereographic = function() { + return d3_geo_projection(d3_geo_stereographic); + }).raw = d3_geo_stereographic; + function d3_geo_transverseMercator(λ, φ) { + return [ Math.log(Math.tan(Ï€ / 4 + φ / 2)), -λ ]; + } + d3_geo_transverseMercator.invert = function(x, y) { + return [ -y, 2 * Math.atan(Math.exp(x)) - halfÏ€ ]; + }; + (d3.geo.transverseMercator = function() { + var projection = d3_geo_mercatorProjection(d3_geo_transverseMercator), center = projection.center, rotate = projection.rotate; + projection.center = function(_) { + return _ ? center([ -_[1], _[0] ]) : (_ = center(), [ -_[1], _[0] ]); + }; + projection.rotate = function(_) { + return _ ? rotate([ _[0], _[1], _.length > 2 ? _[2] + 90 : 90 ]) : (_ = rotate(), + [ _[0], _[1], _[2] - 90 ]); + }; + return projection.rotate([ 0, 0 ]); + }).raw = d3_geo_transverseMercator; + d3.geom = {}; + function d3_geom_pointX(d) { + return d[0]; + } + function d3_geom_pointY(d) { + return d[1]; } d3.geom.hull = function(vertices) { - var x = d3_svg_lineX, y = d3_svg_lineY; + var x = d3_geom_pointX, y = d3_geom_pointY; if (arguments.length) return hull(vertices); function hull(data) { if (data.length < 3) return []; - var fx = d3_functor(x), fy = d3_functor(y), n = data.length, vertices, plen = n - 1, points = [], stack = [], d, i, j, h = 0, x1, y1, x2, y2, u, v, a, sp; - if (fx === d3_svg_lineX && y === d3_svg_lineY) vertices = data; else for (i = 0, - vertices = []; i < n; ++i) { - vertices.push([ +fx.call(this, d = data[i], i), +fy.call(this, d, i) ]); - } - for (i = 1; i < n; ++i) { - if (vertices[i][1] < vertices[h][1] || vertices[i][1] == vertices[h][1] && vertices[i][0] < vertices[h][0]) h = i; - } - for (i = 0; i < n; ++i) { - if (i === h) continue; - y1 = vertices[i][1] - vertices[h][1]; - x1 = vertices[i][0] - vertices[h][0]; - points.push({ - angle: Math.atan2(y1, x1), - index: i - }); - } - points.sort(function(a, b) { - return a.angle - b.angle; - }); - a = points[0].angle; - v = points[0].index; - u = 0; - for (i = 1; i < plen; ++i) { - j = points[i].index; - if (a == points[i].angle) { - x1 = vertices[v][0] - vertices[h][0]; - y1 = vertices[v][1] - vertices[h][1]; - x2 = vertices[j][0] - vertices[h][0]; - y2 = vertices[j][1] - vertices[h][1]; - if (x1 * x1 + y1 * y1 >= x2 * x2 + y2 * y2) { - points[i].index = -1; - continue; - } else { - points[u].index = -1; - } - } - a = points[i].angle; - u = i; - v = j; - } - stack.push(h); - for (i = 0, j = 0; i < 2; ++j) { - if (points[j].index > -1) { - stack.push(points[j].index); - i++; - } - } - sp = stack.length; - for (;j < plen; ++j) { - if (points[j].index < 0) continue; - while (!d3_geom_hullCCW(stack[sp - 2], stack[sp - 1], points[j].index, vertices)) { - --sp; - } - stack[sp++] = points[j].index; - } - var poly = []; - for (i = sp - 1; i >= 0; --i) poly.push(data[stack[i]]); - return poly; + var fx = d3_functor(x), fy = d3_functor(y), i, n = data.length, points = [], flippedPoints = []; + for (i = 0; i < n; i++) { + points.push([ +fx.call(this, data[i], i), +fy.call(this, data[i], i), i ]); + } + points.sort(d3_geom_hullOrder); + for (i = 0; i < n; i++) flippedPoints.push([ points[i][0], -points[i][1] ]); + var upper = d3_geom_hullUpper(points), lower = d3_geom_hullUpper(flippedPoints); + var skipLeft = lower[0] === upper[0], skipRight = lower[lower.length - 1] === upper[upper.length - 1], polygon = []; + for (i = upper.length - 1; i >= 0; --i) polygon.push(data[points[upper[i]][2]]); + for (i = +skipLeft; i < lower.length - skipRight; ++i) polygon.push(data[points[lower[i]][2]]); + return polygon; } hull.x = function(_) { return arguments.length ? (x = _, hull) : x; @@ -4458,18 +4727,16 @@ d3 = function() { }; return hull; }; - function d3_geom_hullCCW(i1, i2, i3, v) { - var t, a, b, c, d, e, f; - t = v[i1]; - a = t[0]; - b = t[1]; - t = v[i2]; - c = t[0]; - d = t[1]; - t = v[i3]; - e = t[0]; - f = t[1]; - return (f - b) * (c - a) - (d - b) * (e - a) > 0; + function d3_geom_hullUpper(points) { + var n = points.length, hull = [ 0, 1 ], hs = 2; + for (var i = 2; i < n; i++) { + while (hs > 1 && d3_cross2d(points[hull[hs - 2]], points[hull[hs - 1]], points[i]) <= 0) --hs; + hull[hs++] = i; + } + return hull.slice(0, hs); + } + function d3_geom_hullOrder(a, b) { + return a[0] - b[0] || a[1] - b[1]; } d3.geom.polygon = function(coordinates) { d3_subclass(coordinates, d3_geom_polygonPrototype); @@ -4533,426 +4800,656 @@ d3 = function() { var a = coordinates[0], b = coordinates[coordinates.length - 1]; return !(a[0] - b[0] || a[1] - b[1]); } - d3.geom.delaunay = function(vertices) { - var edges = vertices.map(function() { - return []; - }), triangles = []; - d3_geom_voronoiTessellate(vertices, function(e) { - edges[e.region.l.index].push(vertices[e.region.r.index]); - }); - edges.forEach(function(edge, i) { - var v = vertices[i], cx = v[0], cy = v[1]; - edge.forEach(function(v) { - v.angle = Math.atan2(v[0] - cx, v[1] - cy); - }); - edge.sort(function(a, b) { - return a.angle - b.angle; - }); - for (var j = 0, m = edge.length - 1; j < m; j++) { - triangles.push([ v, edge[j], edge[j + 1] ]); + var d3_geom_voronoiEdges, d3_geom_voronoiCells, d3_geom_voronoiBeaches, d3_geom_voronoiBeachPool = [], d3_geom_voronoiFirstCircle, d3_geom_voronoiCircles, d3_geom_voronoiCirclePool = []; + function d3_geom_voronoiBeach() { + d3_geom_voronoiRedBlackNode(this); + this.edge = this.site = this.circle = null; + } + function d3_geom_voronoiCreateBeach(site) { + var beach = d3_geom_voronoiBeachPool.pop() || new d3_geom_voronoiBeach(); + beach.site = site; + return beach; + } + function d3_geom_voronoiDetachBeach(beach) { + d3_geom_voronoiDetachCircle(beach); + d3_geom_voronoiBeaches.remove(beach); + d3_geom_voronoiBeachPool.push(beach); + d3_geom_voronoiRedBlackNode(beach); + } + function d3_geom_voronoiRemoveBeach(beach) { + var circle = beach.circle, x = circle.x, y = circle.cy, vertex = { + x: x, + y: y + }, previous = beach.P, next = beach.N, disappearing = [ beach ]; + d3_geom_voronoiDetachBeach(beach); + var lArc = previous; + while (lArc.circle && abs(x - lArc.circle.x) < ε && abs(y - lArc.circle.cy) < ε) { + previous = lArc.P; + disappearing.unshift(lArc); + d3_geom_voronoiDetachBeach(lArc); + lArc = previous; + } + disappearing.unshift(lArc); + d3_geom_voronoiDetachCircle(lArc); + var rArc = next; + while (rArc.circle && abs(x - rArc.circle.x) < ε && abs(y - rArc.circle.cy) < ε) { + next = rArc.N; + disappearing.push(rArc); + d3_geom_voronoiDetachBeach(rArc); + rArc = next; + } + disappearing.push(rArc); + d3_geom_voronoiDetachCircle(rArc); + var nArcs = disappearing.length, iArc; + for (iArc = 1; iArc < nArcs; ++iArc) { + rArc = disappearing[iArc]; + lArc = disappearing[iArc - 1]; + d3_geom_voronoiSetEdgeEnd(rArc.edge, lArc.site, rArc.site, vertex); + } + lArc = disappearing[0]; + rArc = disappearing[nArcs - 1]; + rArc.edge = d3_geom_voronoiCreateEdge(lArc.site, rArc.site, null, vertex); + d3_geom_voronoiAttachCircle(lArc); + d3_geom_voronoiAttachCircle(rArc); + } + function d3_geom_voronoiAddBeach(site) { + var x = site.x, directrix = site.y, lArc, rArc, dxl, dxr, node = d3_geom_voronoiBeaches._; + while (node) { + dxl = d3_geom_voronoiLeftBreakPoint(node, directrix) - x; + if (dxl > ε) node = node.L; else { + dxr = x - d3_geom_voronoiRightBreakPoint(node, directrix); + if (dxr > ε) { + if (!node.R) { + lArc = node; + break; + } + node = node.R; + } else { + if (dxl > -ε) { + lArc = node.P; + rArc = node; + } else if (dxr > -ε) { + lArc = node; + rArc = node.N; + } else { + lArc = rArc = node; + } + break; + } + } + } + var newArc = d3_geom_voronoiCreateBeach(site); + d3_geom_voronoiBeaches.insert(lArc, newArc); + if (!lArc && !rArc) return; + if (lArc === rArc) { + d3_geom_voronoiDetachCircle(lArc); + rArc = d3_geom_voronoiCreateBeach(lArc.site); + d3_geom_voronoiBeaches.insert(newArc, rArc); + newArc.edge = rArc.edge = d3_geom_voronoiCreateEdge(lArc.site, newArc.site); + d3_geom_voronoiAttachCircle(lArc); + d3_geom_voronoiAttachCircle(rArc); + return; + } + if (!rArc) { + newArc.edge = d3_geom_voronoiCreateEdge(lArc.site, newArc.site); + return; + } + d3_geom_voronoiDetachCircle(lArc); + d3_geom_voronoiDetachCircle(rArc); + var lSite = lArc.site, ax = lSite.x, ay = lSite.y, bx = site.x - ax, by = site.y - ay, rSite = rArc.site, cx = rSite.x - ax, cy = rSite.y - ay, d = 2 * (bx * cy - by * cx), hb = bx * bx + by * by, hc = cx * cx + cy * cy, vertex = { + x: (cy * hb - by * hc) / d + ax, + y: (bx * hc - cx * hb) / d + ay + }; + d3_geom_voronoiSetEdgeEnd(rArc.edge, lSite, rSite, vertex); + newArc.edge = d3_geom_voronoiCreateEdge(lSite, site, null, vertex); + rArc.edge = d3_geom_voronoiCreateEdge(site, rSite, null, vertex); + d3_geom_voronoiAttachCircle(lArc); + d3_geom_voronoiAttachCircle(rArc); + } + function d3_geom_voronoiLeftBreakPoint(arc, directrix) { + var site = arc.site, rfocx = site.x, rfocy = site.y, pby2 = rfocy - directrix; + if (!pby2) return rfocx; + var lArc = arc.P; + if (!lArc) return -Infinity; + site = lArc.site; + var lfocx = site.x, lfocy = site.y, plby2 = lfocy - directrix; + if (!plby2) return lfocx; + var hl = lfocx - rfocx, aby2 = 1 / pby2 - 1 / plby2, b = hl / plby2; + if (aby2) return (-b + Math.sqrt(b * b - 2 * aby2 * (hl * hl / (-2 * plby2) - lfocy + plby2 / 2 + rfocy - pby2 / 2))) / aby2 + rfocx; + return (rfocx + lfocx) / 2; + } + function d3_geom_voronoiRightBreakPoint(arc, directrix) { + var rArc = arc.N; + if (rArc) return d3_geom_voronoiLeftBreakPoint(rArc, directrix); + var site = arc.site; + return site.y === directrix ? site.x : Infinity; + } + function d3_geom_voronoiCell(site) { + this.site = site; + this.edges = []; + } + d3_geom_voronoiCell.prototype.prepare = function() { + var halfEdges = this.edges, iHalfEdge = halfEdges.length, edge; + while (iHalfEdge--) { + edge = halfEdges[iHalfEdge].edge; + if (!edge.b || !edge.a) halfEdges.splice(iHalfEdge, 1); + } + halfEdges.sort(d3_geom_voronoiHalfEdgeOrder); + return halfEdges.length; + }; + function d3_geom_voronoiCloseCells(extent) { + var x0 = extent[0][0], x1 = extent[1][0], y0 = extent[0][1], y1 = extent[1][1], x2, y2, x3, y3, cells = d3_geom_voronoiCells, iCell = cells.length, cell, iHalfEdge, halfEdges, nHalfEdges, start, end; + while (iCell--) { + cell = cells[iCell]; + if (!cell || !cell.prepare()) continue; + halfEdges = cell.edges; + nHalfEdges = halfEdges.length; + iHalfEdge = 0; + while (iHalfEdge < nHalfEdges) { + end = halfEdges[iHalfEdge].end(), x3 = end.x, y3 = end.y; + start = halfEdges[++iHalfEdge % nHalfEdges].start(), x2 = start.x, y2 = start.y; + if (abs(x3 - x2) > ε || abs(y3 - y2) > ε) { + halfEdges.splice(iHalfEdge, 0, new d3_geom_voronoiHalfEdge(d3_geom_voronoiCreateBorderEdge(cell.site, end, abs(x3 - x0) < ε && y1 - y3 > ε ? { + x: x0, + y: abs(x2 - x0) < ε ? y2 : y1 + } : abs(y3 - y1) < ε && x1 - x3 > ε ? { + x: abs(y2 - y1) < ε ? x2 : x1, + y: y1 + } : abs(x3 - x1) < ε && y3 - y0 > ε ? { + x: x1, + y: abs(x2 - x1) < ε ? y2 : y0 + } : abs(y3 - y0) < ε && x3 - x0 > ε ? { + x: abs(y2 - y0) < ε ? x2 : x0, + y: y0 + } : null), cell.site, null)); + ++nHalfEdges; + } + } + } + } + function d3_geom_voronoiHalfEdgeOrder(a, b) { + return b.angle - a.angle; + } + function d3_geom_voronoiCircle() { + d3_geom_voronoiRedBlackNode(this); + this.x = this.y = this.arc = this.site = this.cy = null; + } + function d3_geom_voronoiAttachCircle(arc) { + var lArc = arc.P, rArc = arc.N; + if (!lArc || !rArc) return; + var lSite = lArc.site, cSite = arc.site, rSite = rArc.site; + if (lSite === rSite) return; + var bx = cSite.x, by = cSite.y, ax = lSite.x - bx, ay = lSite.y - by, cx = rSite.x - bx, cy = rSite.y - by; + var d = 2 * (ax * cy - ay * cx); + if (d >= -ε2) return; + var ha = ax * ax + ay * ay, hc = cx * cx + cy * cy, x = (cy * ha - ay * hc) / d, y = (ax * hc - cx * ha) / d, cy = y + by; + var circle = d3_geom_voronoiCirclePool.pop() || new d3_geom_voronoiCircle(); + circle.arc = arc; + circle.site = cSite; + circle.x = x + bx; + circle.y = cy + Math.sqrt(x * x + y * y); + circle.cy = cy; + arc.circle = circle; + var before = null, node = d3_geom_voronoiCircles._; + while (node) { + if (circle.y < node.y || circle.y === node.y && circle.x <= node.x) { + if (node.L) node = node.L; else { + before = node.P; + break; + } + } else { + if (node.R) node = node.R; else { + before = node; + break; + } + } + } + d3_geom_voronoiCircles.insert(before, circle); + if (!before) d3_geom_voronoiFirstCircle = circle; + } + function d3_geom_voronoiDetachCircle(arc) { + var circle = arc.circle; + if (circle) { + if (!circle.P) d3_geom_voronoiFirstCircle = circle.N; + d3_geom_voronoiCircles.remove(circle); + d3_geom_voronoiCirclePool.push(circle); + d3_geom_voronoiRedBlackNode(circle); + arc.circle = null; + } + } + function d3_geom_voronoiClipEdges(extent) { + var edges = d3_geom_voronoiEdges, clip = d3_geom_clipLine(extent[0][0], extent[0][1], extent[1][0], extent[1][1]), i = edges.length, e; + while (i--) { + e = edges[i]; + if (!d3_geom_voronoiConnectEdge(e, extent) || !clip(e) || abs(e.a.x - e.b.x) < ε && abs(e.a.y - e.b.y) < ε) { + e.a = e.b = null; + edges.splice(i, 1); + } + } + } + function d3_geom_voronoiConnectEdge(edge, extent) { + var vb = edge.b; + if (vb) return true; + var va = edge.a, x0 = extent[0][0], x1 = extent[1][0], y0 = extent[0][1], y1 = extent[1][1], lSite = edge.l, rSite = edge.r, lx = lSite.x, ly = lSite.y, rx = rSite.x, ry = rSite.y, fx = (lx + rx) / 2, fy = (ly + ry) / 2, fm, fb; + if (ry === ly) { + if (fx < x0 || fx >= x1) return; + if (lx > rx) { + if (!va) va = { + x: fx, + y: y0 + }; else if (va.y >= y1) return; + vb = { + x: fx, + y: y1 + }; + } else { + if (!va) va = { + x: fx, + y: y1 + }; else if (va.y < y0) return; + vb = { + x: fx, + y: y0 + }; } - }); - return triangles; - }; - d3.geom.voronoi = function(points) { - var x = d3_svg_lineX, y = d3_svg_lineY, clipPolygon = null; - if (arguments.length) return voronoi(points); - function voronoi(data) { - var points, polygons = data.map(function() { - return []; - }), fx = d3_functor(x), fy = d3_functor(y), d, i, n = data.length, Z = 1e6; - if (fx === d3_svg_lineX && fy === d3_svg_lineY) points = data; else for (points = new Array(n), - i = 0; i < n; ++i) { - points[i] = [ +fx.call(this, d = data[i], i), +fy.call(this, d, i) ]; - } - d3_geom_voronoiTessellate(points, function(e) { - var s1, s2, x1, x2, y1, y2; - if (e.a === 1 && e.b >= 0) { - s1 = e.ep.r; - s2 = e.ep.l; + } else { + fm = (lx - rx) / (ry - ly); + fb = fy - fm * fx; + if (fm < -1 || fm > 1) { + if (lx > rx) { + if (!va) va = { + x: (y0 - fb) / fm, + y: y0 + }; else if (va.y >= y1) return; + vb = { + x: (y1 - fb) / fm, + y: y1 + }; } else { - s1 = e.ep.l; - s2 = e.ep.r; - } - if (e.a === 1) { - y1 = s1 ? s1.y : -Z; - x1 = e.c - e.b * y1; - y2 = s2 ? s2.y : Z; - x2 = e.c - e.b * y2; + if (!va) va = { + x: (y1 - fb) / fm, + y: y1 + }; else if (va.y < y0) return; + vb = { + x: (y0 - fb) / fm, + y: y0 + }; + } + } else { + if (ly < ry) { + if (!va) va = { + x: x0, + y: fm * x0 + fb + }; else if (va.x >= x1) return; + vb = { + x: x1, + y: fm * x1 + fb + }; } else { - x1 = s1 ? s1.x : -Z; - y1 = e.c - e.a * x1; - x2 = s2 ? s2.x : Z; - y2 = e.c - e.a * x2; - } - var v1 = [ x1, y1 ], v2 = [ x2, y2 ]; - polygons[e.region.l.index].push(v1, v2); - polygons[e.region.r.index].push(v1, v2); - }); - polygons = polygons.map(function(polygon, i) { - var cx = points[i][0], cy = points[i][1], angle = polygon.map(function(v) { - return Math.atan2(v[0] - cx, v[1] - cy); - }), order = d3.range(polygon.length).sort(function(a, b) { - return angle[a] - angle[b]; - }); - return order.filter(function(d, i) { - return !i || angle[d] - angle[order[i - 1]] > ε; - }).map(function(d) { - return polygon[d]; - }); - }); - polygons.forEach(function(polygon, i) { - var n = polygon.length; - if (!n) return polygon.push([ -Z, -Z ], [ -Z, Z ], [ Z, Z ], [ Z, -Z ]); - if (n > 2) return; - var p0 = points[i], p1 = polygon[0], p2 = polygon[1], x0 = p0[0], y0 = p0[1], x1 = p1[0], y1 = p1[1], x2 = p2[0], y2 = p2[1], dx = Math.abs(x2 - x1), dy = y2 - y1; - if (Math.abs(dy) < ε) { - var y = y0 < y1 ? -Z : Z; - polygon.push([ -Z, y ], [ Z, y ]); - } else if (dx < ε) { - var x = x0 < x1 ? -Z : Z; - polygon.push([ x, -Z ], [ x, Z ]); + if (!va) va = { + x: x1, + y: fm * x1 + fb + }; else if (va.x < x0) return; + vb = { + x: x0, + y: fm * x0 + fb + }; + } + } + } + edge.a = va; + edge.b = vb; + return true; + } + function d3_geom_voronoiEdge(lSite, rSite) { + this.l = lSite; + this.r = rSite; + this.a = this.b = null; + } + function d3_geom_voronoiCreateEdge(lSite, rSite, va, vb) { + var edge = new d3_geom_voronoiEdge(lSite, rSite); + d3_geom_voronoiEdges.push(edge); + if (va) d3_geom_voronoiSetEdgeEnd(edge, lSite, rSite, va); + if (vb) d3_geom_voronoiSetEdgeEnd(edge, rSite, lSite, vb); + d3_geom_voronoiCells[lSite.i].edges.push(new d3_geom_voronoiHalfEdge(edge, lSite, rSite)); + d3_geom_voronoiCells[rSite.i].edges.push(new d3_geom_voronoiHalfEdge(edge, rSite, lSite)); + return edge; + } + function d3_geom_voronoiCreateBorderEdge(lSite, va, vb) { + var edge = new d3_geom_voronoiEdge(lSite, null); + edge.a = va; + edge.b = vb; + d3_geom_voronoiEdges.push(edge); + return edge; + } + function d3_geom_voronoiSetEdgeEnd(edge, lSite, rSite, vertex) { + if (!edge.a && !edge.b) { + edge.a = vertex; + edge.l = lSite; + edge.r = rSite; + } else if (edge.l === rSite) { + edge.b = vertex; + } else { + edge.a = vertex; + } + } + function d3_geom_voronoiHalfEdge(edge, lSite, rSite) { + var va = edge.a, vb = edge.b; + this.edge = edge; + this.site = lSite; + this.angle = rSite ? Math.atan2(rSite.y - lSite.y, rSite.x - lSite.x) : edge.l === lSite ? Math.atan2(vb.x - va.x, va.y - vb.y) : Math.atan2(va.x - vb.x, vb.y - va.y); + } + d3_geom_voronoiHalfEdge.prototype = { + start: function() { + return this.edge.l === this.site ? this.edge.a : this.edge.b; + }, + end: function() { + return this.edge.l === this.site ? this.edge.b : this.edge.a; + } + }; + function d3_geom_voronoiRedBlackTree() { + this._ = null; + } + function d3_geom_voronoiRedBlackNode(node) { + node.U = node.C = node.L = node.R = node.P = node.N = null; + } + d3_geom_voronoiRedBlackTree.prototype = { + insert: function(after, node) { + var parent, grandpa, uncle; + if (after) { + node.P = after; + node.N = after.N; + if (after.N) after.N.P = node; + after.N = node; + if (after.R) { + after = after.R; + while (after.L) after = after.L; + after.L = node; + } else { + after.R = node; + } + parent = after; + } else if (this._) { + after = d3_geom_voronoiRedBlackFirst(this._); + node.P = null; + node.N = after; + after.P = after.L = node; + parent = after; + } else { + node.P = node.N = null; + this._ = node; + parent = null; + } + node.L = node.R = null; + node.U = parent; + node.C = true; + after = node; + while (parent && parent.C) { + grandpa = parent.U; + if (parent === grandpa.L) { + uncle = grandpa.R; + if (uncle && uncle.C) { + parent.C = uncle.C = false; + grandpa.C = true; + after = grandpa; + } else { + if (after === parent.R) { + d3_geom_voronoiRedBlackRotateLeft(this, parent); + after = parent; + parent = after.U; + } + parent.C = false; + grandpa.C = true; + d3_geom_voronoiRedBlackRotateRight(this, grandpa); + } } else { - var y = (x2 - x1) * (y1 - y0) < (x1 - x0) * (y2 - y1) ? Z : -Z, z = Math.abs(dy) - dx; - if (Math.abs(z) < ε) { - polygon.push([ dy < 0 ? y : -y, y ]); + uncle = grandpa.L; + if (uncle && uncle.C) { + parent.C = uncle.C = false; + grandpa.C = true; + after = grandpa; } else { - if (z > 0) y *= -1; - polygon.push([ -Z, y ], [ Z, y ]); + if (after === parent.L) { + d3_geom_voronoiRedBlackRotateRight(this, parent); + after = parent; + parent = after.U; + } + parent.C = false; + grandpa.C = true; + d3_geom_voronoiRedBlackRotateLeft(this, grandpa); } } - }); - if (clipPolygon) for (i = 0; i < n; ++i) clipPolygon.clip(polygons[i]); - for (i = 0; i < n; ++i) polygons[i].point = data[i]; - return polygons; - } - voronoi.x = function(_) { - return arguments.length ? (x = _, voronoi) : x; - }; - voronoi.y = function(_) { - return arguments.length ? (y = _, voronoi) : y; - }; - voronoi.clipExtent = function(_) { - if (!arguments.length) return clipPolygon && [ clipPolygon[0], clipPolygon[2] ]; - if (_ == null) clipPolygon = null; else { - var x1 = +_[0][0], y1 = +_[0][1], x2 = +_[1][0], y2 = +_[1][1]; - clipPolygon = d3.geom.polygon([ [ x1, y1 ], [ x1, y2 ], [ x2, y2 ], [ x2, y1 ] ]); - } - return voronoi; - }; - voronoi.size = function(_) { - if (!arguments.length) return clipPolygon && clipPolygon[2]; - return voronoi.clipExtent(_ && [ [ 0, 0 ], _ ]); - }; - voronoi.links = function(data) { - var points, graph = data.map(function() { - return []; - }), links = [], fx = d3_functor(x), fy = d3_functor(y), d, i, n = data.length; - if (fx === d3_svg_lineX && fy === d3_svg_lineY) points = data; else for (points = new Array(n), - i = 0; i < n; ++i) { - points[i] = [ +fx.call(this, d = data[i], i), +fy.call(this, d, i) ]; - } - d3_geom_voronoiTessellate(points, function(e) { - var l = e.region.l.index, r = e.region.r.index; - if (graph[l][r]) return; - graph[l][r] = graph[r][l] = true; - links.push({ - source: data[l], - target: data[r] - }); - }); - return links; - }; - voronoi.triangles = function(data) { - if (x === d3_svg_lineX && y === d3_svg_lineY) return d3.geom.delaunay(data); - var points = new Array(n), fx = d3_functor(x), fy = d3_functor(y), d, i = -1, n = data.length; - while (++i < n) { - (points[i] = [ +fx.call(this, d = data[i], i), +fy.call(this, d, i) ]).data = d; + parent = after.U; } - return d3.geom.delaunay(points).map(function(triangle) { - return triangle.map(function(point) { - return point.data; - }); - }); - }; - return voronoi; - }; - var d3_geom_voronoiOpposite = { - l: "r", - r: "l" - }; - function d3_geom_voronoiTessellate(points, callback) { - var Sites = { - list: points.map(function(v, i) { - return { - index: i, - x: v[0], - y: v[1] - }; - }).sort(function(a, b) { - return a.y < b.y ? -1 : a.y > b.y ? 1 : a.x < b.x ? -1 : a.x > b.x ? 1 : 0; - }), - bottomSite: null - }; - var EdgeList = { - list: [], - leftEnd: null, - rightEnd: null, - init: function() { - EdgeList.leftEnd = EdgeList.createHalfEdge(null, "l"); - EdgeList.rightEnd = EdgeList.createHalfEdge(null, "l"); - EdgeList.leftEnd.r = EdgeList.rightEnd; - EdgeList.rightEnd.l = EdgeList.leftEnd; - EdgeList.list.unshift(EdgeList.leftEnd, EdgeList.rightEnd); - }, - createHalfEdge: function(edge, side) { - return { - edge: edge, - side: side, - vertex: null, - l: null, - r: null - }; - }, - insert: function(lb, he) { - he.l = lb; - he.r = lb.r; - lb.r.l = he; - lb.r = he; - }, - leftBound: function(p) { - var he = EdgeList.leftEnd; - do { - he = he.r; - } while (he != EdgeList.rightEnd && Geom.rightOf(he, p)); - he = he.l; - return he; - }, - del: function(he) { - he.l.r = he.r; - he.r.l = he.l; - he.edge = null; - }, - right: function(he) { - return he.r; - }, - left: function(he) { - return he.l; - }, - leftRegion: function(he) { - return he.edge == null ? Sites.bottomSite : he.edge.region[he.side]; - }, - rightRegion: function(he) { - return he.edge == null ? Sites.bottomSite : he.edge.region[d3_geom_voronoiOpposite[he.side]]; - } - }; - var Geom = { - bisect: function(s1, s2) { - var newEdge = { - region: { - l: s1, - r: s2 - }, - ep: { - l: null, - r: null - } - }; - var dx = s2.x - s1.x, dy = s2.y - s1.y, adx = dx > 0 ? dx : -dx, ady = dy > 0 ? dy : -dy; - newEdge.c = s1.x * dx + s1.y * dy + (dx * dx + dy * dy) * .5; - if (adx > ady) { - newEdge.a = 1; - newEdge.b = dy / dx; - newEdge.c /= dx; - } else { - newEdge.b = 1; - newEdge.a = dx / dy; - newEdge.c /= dy; - } - return newEdge; - }, - intersect: function(el1, el2) { - var e1 = el1.edge, e2 = el2.edge; - if (!e1 || !e2 || e1.region.r == e2.region.r) { - return null; - } - var d = e1.a * e2.b - e1.b * e2.a; - if (Math.abs(d) < 1e-10) { - return null; - } - var xint = (e1.c * e2.b - e2.c * e1.b) / d, yint = (e2.c * e1.a - e1.c * e2.a) / d, e1r = e1.region.r, e2r = e2.region.r, el, e; - if (e1r.y < e2r.y || e1r.y == e2r.y && e1r.x < e2r.x) { - el = el1; - e = e1; + this._.C = false; + }, + remove: function(node) { + if (node.N) node.N.P = node.P; + if (node.P) node.P.N = node.N; + node.N = node.P = null; + var parent = node.U, sibling, left = node.L, right = node.R, next, red; + if (!left) next = right; else if (!right) next = left; else next = d3_geom_voronoiRedBlackFirst(right); + if (parent) { + if (parent.L === node) parent.L = next; else parent.R = next; + } else { + this._ = next; + } + if (left && right) { + red = next.C; + next.C = node.C; + next.L = left; + left.U = next; + if (next !== right) { + parent = next.U; + next.U = node.U; + node = next.R; + parent.L = node; + next.R = right; + right.U = next; } else { - el = el2; - e = e2; - } - var rightOfSite = xint >= e.region.r.x; - if (rightOfSite && el.side === "l" || !rightOfSite && el.side === "r") { - return null; - } - return { - x: xint, - y: yint - }; - }, - rightOf: function(he, p) { - var e = he.edge, topsite = e.region.r, rightOfSite = p.x > topsite.x; - if (rightOfSite && he.side === "l") { - return 1; - } - if (!rightOfSite && he.side === "r") { - return 0; + next.U = parent; + parent = next; + node = next.R; } - if (e.a === 1) { - var dyp = p.y - topsite.y, dxp = p.x - topsite.x, fast = 0, above = 0; - if (!rightOfSite && e.b < 0 || rightOfSite && e.b >= 0) { - above = fast = dyp >= e.b * dxp; - } else { - above = p.x + p.y * e.b > e.c; - if (e.b < 0) { - above = !above; - } - if (!above) { - fast = 1; - } + } else { + red = node.C; + node = next; + } + if (node) node.U = parent; + if (red) return; + if (node && node.C) { + node.C = false; + return; + } + do { + if (node === this._) break; + if (node === parent.L) { + sibling = parent.R; + if (sibling.C) { + sibling.C = false; + parent.C = true; + d3_geom_voronoiRedBlackRotateLeft(this, parent); + sibling = parent.R; } - if (!fast) { - var dxs = topsite.x - e.region.l.x; - above = e.b * (dxp * dxp - dyp * dyp) < dxs * dyp * (1 + 2 * dxp / dxs + e.b * e.b); - if (e.b < 0) { - above = !above; + if (sibling.L && sibling.L.C || sibling.R && sibling.R.C) { + if (!sibling.R || !sibling.R.C) { + sibling.L.C = false; + sibling.C = true; + d3_geom_voronoiRedBlackRotateRight(this, sibling); + sibling = parent.R; } + sibling.C = parent.C; + parent.C = sibling.R.C = false; + d3_geom_voronoiRedBlackRotateLeft(this, parent); + node = this._; + break; } } else { - var yl = e.c - e.a * p.x, t1 = p.y - yl, t2 = p.x - topsite.x, t3 = yl - topsite.y; - above = t1 * t1 > t2 * t2 + t3 * t3; - } - return he.side === "l" ? above : !above; - }, - endPoint: function(edge, side, site) { - edge.ep[side] = site; - if (!edge.ep[d3_geom_voronoiOpposite[side]]) return; - callback(edge); - }, - distance: function(s, t) { - var dx = s.x - t.x, dy = s.y - t.y; - return Math.sqrt(dx * dx + dy * dy); - } - }; - var EventQueue = { - list: [], - insert: function(he, site, offset) { - he.vertex = site; - he.ystar = site.y + offset; - for (var i = 0, list = EventQueue.list, l = list.length; i < l; i++) { - var next = list[i]; - if (he.ystar > next.ystar || he.ystar == next.ystar && site.x > next.vertex.x) { - continue; - } else { + sibling = parent.L; + if (sibling.C) { + sibling.C = false; + parent.C = true; + d3_geom_voronoiRedBlackRotateRight(this, parent); + sibling = parent.L; + } + if (sibling.L && sibling.L.C || sibling.R && sibling.R.C) { + if (!sibling.L || !sibling.L.C) { + sibling.R.C = false; + sibling.C = true; + d3_geom_voronoiRedBlackRotateLeft(this, sibling); + sibling = parent.L; + } + sibling.C = parent.C; + parent.C = sibling.L.C = false; + d3_geom_voronoiRedBlackRotateRight(this, parent); + node = this._; break; } } - list.splice(i, 0, he); - }, - del: function(he) { - for (var i = 0, ls = EventQueue.list, l = ls.length; i < l && ls[i] != he; ++i) {} - ls.splice(i, 1); - }, - empty: function() { - return EventQueue.list.length === 0; - }, - nextEvent: function(he) { - for (var i = 0, ls = EventQueue.list, l = ls.length; i < l; ++i) { - if (ls[i] == he) return ls[i + 1]; - } - return null; - }, - min: function() { - var elem = EventQueue.list[0]; - return { - x: elem.vertex.x, - y: elem.ystar - }; - }, - extractMin: function() { - return EventQueue.list.shift(); - } - }; - EdgeList.init(); - Sites.bottomSite = Sites.list.shift(); - var newSite = Sites.list.shift(), newIntStar; - var lbnd, rbnd, llbnd, rrbnd, bisector; - var bot, top, temp, p, v; - var e, pm; + sibling.C = true; + node = parent; + parent = parent.U; + } while (!node.C); + if (node) node.C = false; + } + }; + function d3_geom_voronoiRedBlackRotateLeft(tree, node) { + var p = node, q = node.R, parent = p.U; + if (parent) { + if (parent.L === p) parent.L = q; else parent.R = q; + } else { + tree._ = q; + } + q.U = parent; + p.U = q; + p.R = q.L; + if (p.R) p.R.U = p; + q.L = p; + } + function d3_geom_voronoiRedBlackRotateRight(tree, node) { + var p = node, q = node.L, parent = p.U; + if (parent) { + if (parent.L === p) parent.L = q; else parent.R = q; + } else { + tree._ = q; + } + q.U = parent; + p.U = q; + p.L = q.R; + if (p.L) p.L.U = p; + q.R = p; + } + function d3_geom_voronoiRedBlackFirst(node) { + while (node.L) node = node.L; + return node; + } + function d3_geom_voronoi(sites, bbox) { + var site = sites.sort(d3_geom_voronoiVertexOrder).pop(), x0, y0, circle; + d3_geom_voronoiEdges = []; + d3_geom_voronoiCells = new Array(sites.length); + d3_geom_voronoiBeaches = new d3_geom_voronoiRedBlackTree(); + d3_geom_voronoiCircles = new d3_geom_voronoiRedBlackTree(); while (true) { - if (!EventQueue.empty()) { - newIntStar = EventQueue.min(); - } - if (newSite && (EventQueue.empty() || newSite.y < newIntStar.y || newSite.y == newIntStar.y && newSite.x < newIntStar.x)) { - lbnd = EdgeList.leftBound(newSite); - rbnd = EdgeList.right(lbnd); - bot = EdgeList.rightRegion(lbnd); - e = Geom.bisect(bot, newSite); - bisector = EdgeList.createHalfEdge(e, "l"); - EdgeList.insert(lbnd, bisector); - p = Geom.intersect(lbnd, bisector); - if (p) { - EventQueue.del(lbnd); - EventQueue.insert(lbnd, p, Geom.distance(p, newSite)); - } - lbnd = bisector; - bisector = EdgeList.createHalfEdge(e, "r"); - EdgeList.insert(lbnd, bisector); - p = Geom.intersect(bisector, rbnd); - if (p) { - EventQueue.insert(bisector, p, Geom.distance(p, newSite)); - } - newSite = Sites.list.shift(); - } else if (!EventQueue.empty()) { - lbnd = EventQueue.extractMin(); - llbnd = EdgeList.left(lbnd); - rbnd = EdgeList.right(lbnd); - rrbnd = EdgeList.right(rbnd); - bot = EdgeList.leftRegion(lbnd); - top = EdgeList.rightRegion(rbnd); - v = lbnd.vertex; - Geom.endPoint(lbnd.edge, lbnd.side, v); - Geom.endPoint(rbnd.edge, rbnd.side, v); - EdgeList.del(lbnd); - EventQueue.del(rbnd); - EdgeList.del(rbnd); - pm = "l"; - if (bot.y > top.y) { - temp = bot; - bot = top; - top = temp; - pm = "r"; - } - e = Geom.bisect(bot, top); - bisector = EdgeList.createHalfEdge(e, pm); - EdgeList.insert(llbnd, bisector); - Geom.endPoint(e, d3_geom_voronoiOpposite[pm], v); - p = Geom.intersect(llbnd, bisector); - if (p) { - EventQueue.del(llbnd); - EventQueue.insert(llbnd, p, Geom.distance(p, bot)); - } - p = Geom.intersect(bisector, rrbnd); - if (p) { - EventQueue.insert(bisector, p, Geom.distance(p, bot)); - } + circle = d3_geom_voronoiFirstCircle; + if (site && (!circle || site.y < circle.y || site.y === circle.y && site.x < circle.x)) { + if (site.x !== x0 || site.y !== y0) { + d3_geom_voronoiCells[site.i] = new d3_geom_voronoiCell(site); + d3_geom_voronoiAddBeach(site); + x0 = site.x, y0 = site.y; + } + site = sites.pop(); + } else if (circle) { + d3_geom_voronoiRemoveBeach(circle.arc); } else { break; } } - for (lbnd = EdgeList.right(EdgeList.leftEnd); lbnd != EdgeList.rightEnd; lbnd = EdgeList.right(lbnd)) { - callback(lbnd.edge); + if (bbox) d3_geom_voronoiClipEdges(bbox), d3_geom_voronoiCloseCells(bbox); + var diagram = { + cells: d3_geom_voronoiCells, + edges: d3_geom_voronoiEdges + }; + d3_geom_voronoiBeaches = d3_geom_voronoiCircles = d3_geom_voronoiEdges = d3_geom_voronoiCells = null; + return diagram; + } + function d3_geom_voronoiVertexOrder(a, b) { + return b.y - a.y || b.x - a.x; + } + d3.geom.voronoi = function(points) { + var x = d3_geom_pointX, y = d3_geom_pointY, fx = x, fy = y, clipExtent = d3_geom_voronoiClipExtent; + if (points) return voronoi(points); + function voronoi(data) { + var polygons = new Array(data.length), x0 = clipExtent[0][0], y0 = clipExtent[0][1], x1 = clipExtent[1][0], y1 = clipExtent[1][1]; + d3_geom_voronoi(sites(data), clipExtent).cells.forEach(function(cell, i) { + var edges = cell.edges, site = cell.site, polygon = polygons[i] = edges.length ? edges.map(function(e) { + var s = e.start(); + return [ s.x, s.y ]; + }) : site.x >= x0 && site.x <= x1 && site.y >= y0 && site.y <= y1 ? [ [ x0, y1 ], [ x1, y1 ], [ x1, y0 ], [ x0, y0 ] ] : []; + polygon.point = data[i]; + }); + return polygons; + } + function sites(data) { + return data.map(function(d, i) { + return { + x: Math.round(fx(d, i) / ε) * ε, + y: Math.round(fy(d, i) / ε) * ε, + i: i + }; + }); } + voronoi.links = function(data) { + return d3_geom_voronoi(sites(data)).edges.filter(function(edge) { + return edge.l && edge.r; + }).map(function(edge) { + return { + source: data[edge.l.i], + target: data[edge.r.i] + }; + }); + }; + voronoi.triangles = function(data) { + var triangles = []; + d3_geom_voronoi(sites(data)).cells.forEach(function(cell, i) { + var site = cell.site, edges = cell.edges.sort(d3_geom_voronoiHalfEdgeOrder), j = -1, m = edges.length, e0, s0, e1 = edges[m - 1].edge, s1 = e1.l === site ? e1.r : e1.l; + while (++j < m) { + e0 = e1; + s0 = s1; + e1 = edges[j].edge; + s1 = e1.l === site ? e1.r : e1.l; + if (i < s0.i && i < s1.i && d3_geom_voronoiTriangleArea(site, s0, s1) < 0) { + triangles.push([ data[i], data[s0.i], data[s1.i] ]); + } + } + }); + return triangles; + }; + voronoi.x = function(_) { + return arguments.length ? (fx = d3_functor(x = _), voronoi) : x; + }; + voronoi.y = function(_) { + return arguments.length ? (fy = d3_functor(y = _), voronoi) : y; + }; + voronoi.clipExtent = function(_) { + if (!arguments.length) return clipExtent === d3_geom_voronoiClipExtent ? null : clipExtent; + clipExtent = _ == null ? d3_geom_voronoiClipExtent : _; + return voronoi; + }; + voronoi.size = function(_) { + if (!arguments.length) return clipExtent === d3_geom_voronoiClipExtent ? null : clipExtent && clipExtent[1]; + return voronoi.clipExtent(_ && [ [ 0, 0 ], _ ]); + }; + return voronoi; + }; + var d3_geom_voronoiClipExtent = [ [ -1e6, -1e6 ], [ 1e6, 1e6 ] ]; + function d3_geom_voronoiTriangleArea(a, b, c) { + return (a.x - c.x) * (b.y - a.y) - (a.x - b.x) * (c.y - a.y); } + d3.geom.delaunay = function(vertices) { + return d3.geom.voronoi().triangles(vertices); + }; d3.geom.quadtree = function(points, x1, y1, x2, y2) { - var x = d3_svg_lineX, y = d3_svg_lineY, compat; + var x = d3_geom_pointX, y = d3_geom_pointY, compat; if (compat = arguments.length) { x = d3_geom_quadtreeCompatX; y = d3_geom_quadtreeCompatY; @@ -4996,7 +5493,7 @@ d3 = function() { if (n.leaf) { var nx = n.x, ny = n.y; if (nx != null) { - if (Math.abs(nx - x) + Math.abs(ny - y) < .01) { + if (abs(nx - x) + abs(ny - y) < .01) { insertChild(n, d, x, y, x1, y1, x2, y2); } else { var nPoint = n.point; @@ -5242,7 +5739,7 @@ d3 = function() { var i = name.indexOf("-"), t = i >= 0 ? name.substring(0, i) : name, m = i >= 0 ? name.substring(i + 1) : "in"; t = d3_ease.get(t) || d3_ease_default; m = d3_ease_mode.get(m) || d3_identity; - return d3_ease_clamp(m(t.apply(null, Array.prototype.slice.call(arguments, 1)))); + return d3_ease_clamp(m(t.apply(null, d3_arraySlice.call(arguments, 1)))); }; function d3_ease_clamp(f) { return function(t) { @@ -5610,19 +6107,21 @@ d3 = function() { return chord; }; d3.layout.force = function() { - var force = {}, event = d3.dispatch("start", "tick", "end"), size = [ 1, 1 ], drag, alpha, friction = .9, linkDistance = d3_layout_forceLinkDistance, linkStrength = d3_layout_forceLinkStrength, charge = -30, gravity = .1, theta = .8, nodes = [], links = [], distances, strengths, charges; + var force = {}, event = d3.dispatch("start", "tick", "end"), size = [ 1, 1 ], drag, alpha, friction = .9, linkDistance = d3_layout_forceLinkDistance, linkStrength = d3_layout_forceLinkStrength, charge = -30, chargeDistance2 = d3_layout_forceChargeDistance2, gravity = .1, theta2 = .64, nodes = [], links = [], distances, strengths, charges; function repulse(node) { return function(quad, x1, _, x2) { if (quad.point !== node) { - var dx = quad.cx - node.x, dy = quad.cy - node.y, dn = 1 / Math.sqrt(dx * dx + dy * dy); - if ((x2 - x1) * dn < theta) { - var k = quad.charge * dn * dn; - node.px -= dx * k; - node.py -= dy * k; + var dx = quad.cx - node.x, dy = quad.cy - node.y, dw = x2 - x1, dn = dx * dx + dy * dy; + if (dw * dw / theta2 < dn) { + if (dn < chargeDistance2) { + var k = quad.charge / dn; + node.px -= dx * k; + node.py -= dy * k; + } return true; } - if (quad.point && isFinite(dn)) { - var k = quad.pointCharge * dn * dn; + if (quad.point && dn && dn < chargeDistance2) { + var k = quad.pointCharge / dn; node.px -= dx * k; node.py -= dy * k; } @@ -5726,14 +6225,19 @@ d3 = function() { charge = typeof x === "function" ? x : +x; return force; }; + force.chargeDistance = function(x) { + if (!arguments.length) return Math.sqrt(chargeDistance2); + chargeDistance2 = x * x; + return force; + }; force.gravity = function(x) { if (!arguments.length) return gravity; gravity = +x; return force; }; force.theta = function(x) { - if (!arguments.length) return theta; - theta = +x; + if (!arguments.length) return Math.sqrt(theta2); + theta2 = x * x; return force; }; force.alpha = function(x) { @@ -5751,7 +6255,7 @@ d3 = function() { return force; }; force.start = function() { - var i, j, n = nodes.length, m = links.length, w = size[0], h = size[1], neighbors, o; + var i, n = nodes.length, m = links.length, w = size[0], h = size[1], neighbors, o; for (i = 0; i < n; ++i) { (o = nodes[i]).index = i; o.weight = 0; @@ -5777,13 +6281,8 @@ d3 = function() { charges = []; if (typeof charge === "function") for (i = 0; i < n; ++i) charges[i] = +charge.call(this, nodes[i], i); else for (i = 0; i < n; ++i) charges[i] = charge; function position(dimension, size) { - var neighbors = neighbor(i), j = -1, m = neighbors.length, x; - while (++j < m) if (!isNaN(x = neighbors[j][dimension])) return x; - return Math.random() * size; - } - function neighbor() { if (!neighbors) { - neighbors = []; + neighbors = new Array(n); for (j = 0; j < n; ++j) { neighbors[j] = []; } @@ -5793,7 +6292,9 @@ d3 = function() { neighbors[o.target.index].push(o.source); } } - return neighbors[i]; + var candidates = neighbors[i], j = -1, m = candidates.length, x; + while (++j < m) if (!isNaN(x = candidates[j][dimension])) return x; + return Math.random() * size; } return force.resume(); }; @@ -5854,7 +6355,7 @@ d3 = function() { quad.cx = cx / quad.charge; quad.cy = cy / quad.charge; } - var d3_layout_forceLinkDistance = 20, d3_layout_forceLinkStrength = 1; + var d3_layout_forceLinkDistance = 20, d3_layout_forceLinkStrength = 1, d3_layout_forceChargeDistance2 = Infinity; d3.layout.hierarchy = function() { var sort = d3_layout_hierarchySort, children = d3_layout_hierarchyChildren, value = d3_layout_hierarchyValue; function recurse(node, depth, nodes) { @@ -5862,17 +6363,19 @@ d3 = function() { node.depth = depth; nodes.push(node); if (childs && (n = childs.length)) { - var i = -1, n, c = node.children = [], v = 0, j = depth + 1, d; + var i = -1, n, c = node.children = new Array(n), v = 0, j = depth + 1, d; while (++i < n) { - d = recurse(childs[i], j, nodes); + d = c[i] = recurse(childs[i], j, nodes); d.parent = node; - c.push(d); v += d.value; } if (sort) c.sort(sort); if (value) node.value = v; - } else if (value) { - node.value = +value.call(hierarchy, node, depth) || 0; + } else { + delete node.children; + if (value) { + node.value = +value.call(hierarchy, node, depth) || 0; + } } return node; } @@ -6821,10 +7324,16 @@ d3 = function() { return Math.exp(random()); }; }, + bates: function(m) { + var random = d3.random.irwinHall(m); + return function() { + return random() / m; + }; + }, irwinHall: function(m) { return function() { for (var s = 0, j = 0; j < m; j++) s += Math.random(); - return s / m; + return s; }; } }; @@ -6955,10 +7464,24 @@ d3 = function() { return d3.range.apply(d3, d3_scale_linearTickRange(domain, m)); } function d3_scale_linearTickFormat(domain, m, format) { - var precision = -Math.floor(Math.log(d3_scale_linearTickRange(domain, m)[2]) / Math.LN10 + .01); + var range = d3_scale_linearTickRange(domain, m); return d3.format(format ? format.replace(d3_format_re, function(a, b, c, d, e, f, g, h, i, j) { - return [ b, c, d, e, f, g, h, i || "." + (precision - (j === "%") * 2), j ].join(""); - }) : ",." + precision + "f"); + return [ b, c, d, e, f, g, h, i || "." + d3_scale_linearFormatPrecision(j, range), j ].join(""); + }) : ",." + d3_scale_linearPrecision(range[2]) + "f"); + } + var d3_scale_linearFormatSignificant = { + s: 1, + g: 1, + p: 1, + r: 1, + e: 1 + }; + function d3_scale_linearPrecision(value) { + return -Math.floor(Math.log(value) / Math.LN10 + .01); + } + function d3_scale_linearFormatPrecision(type, range) { + var p = d3_scale_linearPrecision(range[2]); + return type in d3_scale_linearFormatSignificant ? Math.abs(p - d3_scale_linearPrecision(Math.max(Math.abs(range[0]), Math.abs(range[1])))) + +(type !== "e") : p - (type === "%") * 2; } d3.scale.log = function() { return d3_scale_log(d3.scale.linear().domain([ 0, 1 ]), 10, true, [ 1, 10 ]); @@ -7297,6 +7820,7 @@ d3 = function() { }; return identity; } + d3.svg = {}; d3.svg.arc = function() { var innerRadius = d3_svg_arcInnerRadius, outerRadius = d3_svg_arcOuterRadius, startAngle = d3_svg_arcStartAngle, endAngle = d3_svg_arcEndAngle; function arc() { @@ -7343,366 +7867,615 @@ d3 = function() { function d3_svg_arcEndAngle(d) { return d.endAngle; } - d3.svg.line.radial = function() { - var line = d3_svg_line(d3_svg_lineRadial); - line.radius = line.x, delete line.x; - line.angle = line.y, delete line.y; - return line; - }; - function d3_svg_lineRadial(points) { - var point, i = -1, n = points.length, r, a; - while (++i < n) { - point = points[i]; - r = point[0]; - a = point[1] + d3_svg_arcOffset; - point[0] = r * Math.cos(a); - point[1] = r * Math.sin(a); - } - return points; - } - function d3_svg_area(projection) { - var x0 = d3_svg_lineX, x1 = d3_svg_lineX, y0 = 0, y1 = d3_svg_lineY, defined = d3_true, interpolate = d3_svg_lineLinear, interpolateKey = interpolate.key, interpolateReverse = interpolate, L = "L", tension = .7; - function area(data) { - var segments = [], points0 = [], points1 = [], i = -1, n = data.length, d, fx0 = d3_functor(x0), fy0 = d3_functor(y0), fx1 = x0 === x1 ? function() { - return x; - } : d3_functor(x1), fy1 = y0 === y1 ? function() { - return y; - } : d3_functor(y1), x, y; + function d3_svg_line(projection) { + var x = d3_geom_pointX, y = d3_geom_pointY, defined = d3_true, interpolate = d3_svg_lineLinear, interpolateKey = interpolate.key, tension = .7; + function line(data) { + var segments = [], points = [], i = -1, n = data.length, d, fx = d3_functor(x), fy = d3_functor(y); function segment() { - segments.push("M", interpolate(projection(points1), tension), L, interpolateReverse(projection(points0.reverse()), tension), "Z"); + segments.push("M", interpolate(projection(points), tension)); } while (++i < n) { if (defined.call(this, d = data[i], i)) { - points0.push([ x = +fx0.call(this, d, i), y = +fy0.call(this, d, i) ]); - points1.push([ +fx1.call(this, d, i), +fy1.call(this, d, i) ]); - } else if (points0.length) { + points.push([ +fx.call(this, d, i), +fy.call(this, d, i) ]); + } else if (points.length) { segment(); - points0 = []; - points1 = []; + points = []; } } - if (points0.length) segment(); + if (points.length) segment(); return segments.length ? segments.join("") : null; } - area.x = function(_) { - if (!arguments.length) return x1; - x0 = x1 = _; - return area; - }; - area.x0 = function(_) { - if (!arguments.length) return x0; - x0 = _; - return area; - }; - area.x1 = function(_) { - if (!arguments.length) return x1; - x1 = _; - return area; - }; - area.y = function(_) { - if (!arguments.length) return y1; - y0 = y1 = _; - return area; - }; - area.y0 = function(_) { - if (!arguments.length) return y0; - y0 = _; - return area; + line.x = function(_) { + if (!arguments.length) return x; + x = _; + return line; }; - area.y1 = function(_) { - if (!arguments.length) return y1; - y1 = _; - return area; + line.y = function(_) { + if (!arguments.length) return y; + y = _; + return line; }; - area.defined = function(_) { + line.defined = function(_) { if (!arguments.length) return defined; defined = _; - return area; + return line; }; - area.interpolate = function(_) { + line.interpolate = function(_) { if (!arguments.length) return interpolateKey; if (typeof _ === "function") interpolateKey = interpolate = _; else interpolateKey = (interpolate = d3_svg_lineInterpolators.get(_) || d3_svg_lineLinear).key; - interpolateReverse = interpolate.reverse || interpolate; - L = interpolate.closed ? "M" : "L"; - return area; + return line; }; - area.tension = function(_) { + line.tension = function(_) { if (!arguments.length) return tension; tension = _; - return area; + return line; }; - return area; + return line; } - d3_svg_lineStepBefore.reverse = d3_svg_lineStepAfter; - d3_svg_lineStepAfter.reverse = d3_svg_lineStepBefore; - d3.svg.area = function() { - return d3_svg_area(d3_identity); - }; - d3.svg.area.radial = function() { - var area = d3_svg_area(d3_svg_lineRadial); - area.radius = area.x, delete area.x; - area.innerRadius = area.x0, delete area.x0; - area.outerRadius = area.x1, delete area.x1; - area.angle = area.y, delete area.y; - area.startAngle = area.y0, delete area.y0; - area.endAngle = area.y1, delete area.y1; - return area; + d3.svg.line = function() { + return d3_svg_line(d3_identity); }; - d3.svg.chord = function() { - var source = d3_source, target = d3_target, radius = d3_svg_chordRadius, startAngle = d3_svg_arcStartAngle, endAngle = d3_svg_arcEndAngle; - function chord(d, i) { - var s = subgroup(this, source, d, i), t = subgroup(this, target, d, i); - return "M" + s.p0 + arc(s.r, s.p1, s.a1 - s.a0) + (equals(s, t) ? curve(s.r, s.p1, s.r, s.p0) : curve(s.r, s.p1, t.r, t.p0) + arc(t.r, t.p1, t.a1 - t.a0) + curve(t.r, t.p1, s.r, s.p0)) + "Z"; - } - function subgroup(self, f, d, i) { - var subgroup = f.call(self, d, i), r = radius.call(self, subgroup, i), a0 = startAngle.call(self, subgroup, i) + d3_svg_arcOffset, a1 = endAngle.call(self, subgroup, i) + d3_svg_arcOffset; - return { - r: r, - a0: a0, - a1: a1, - p0: [ r * Math.cos(a0), r * Math.sin(a0) ], - p1: [ r * Math.cos(a1), r * Math.sin(a1) ] - }; + var d3_svg_lineInterpolators = d3.map({ + linear: d3_svg_lineLinear, + "linear-closed": d3_svg_lineLinearClosed, + step: d3_svg_lineStep, + "step-before": d3_svg_lineStepBefore, + "step-after": d3_svg_lineStepAfter, + basis: d3_svg_lineBasis, + "basis-open": d3_svg_lineBasisOpen, + "basis-closed": d3_svg_lineBasisClosed, + bundle: d3_svg_lineBundle, + cardinal: d3_svg_lineCardinal, + "cardinal-open": d3_svg_lineCardinalOpen, + "cardinal-closed": d3_svg_lineCardinalClosed, + monotone: d3_svg_lineMonotone + }); + d3_svg_lineInterpolators.forEach(function(key, value) { + value.key = key; + value.closed = /-closed$/.test(key); + }); + function d3_svg_lineLinear(points) { + return points.join("L"); + } + function d3_svg_lineLinearClosed(points) { + return d3_svg_lineLinear(points) + "Z"; + } + function d3_svg_lineStep(points) { + var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; + while (++i < n) path.push("H", (p[0] + (p = points[i])[0]) / 2, "V", p[1]); + if (n > 1) path.push("H", p[0]); + return path.join(""); + } + function d3_svg_lineStepBefore(points) { + var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; + while (++i < n) path.push("V", (p = points[i])[1], "H", p[0]); + return path.join(""); + } + function d3_svg_lineStepAfter(points) { + var i = 0, n = points.length, p = points[0], path = [ p[0], ",", p[1] ]; + while (++i < n) path.push("H", (p = points[i])[0], "V", p[1]); + return path.join(""); + } + function d3_svg_lineCardinalOpen(points, tension) { + return points.length < 4 ? d3_svg_lineLinear(points) : points[1] + d3_svg_lineHermite(points.slice(1, points.length - 1), d3_svg_lineCardinalTangents(points, tension)); + } + function d3_svg_lineCardinalClosed(points, tension) { + return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite((points.push(points[0]), + points), d3_svg_lineCardinalTangents([ points[points.length - 2] ].concat(points, [ points[1] ]), tension)); + } + function d3_svg_lineCardinal(points, tension) { + return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite(points, d3_svg_lineCardinalTangents(points, tension)); + } + function d3_svg_lineHermite(points, tangents) { + if (tangents.length < 1 || points.length != tangents.length && points.length != tangents.length + 2) { + return d3_svg_lineLinear(points); } - function equals(a, b) { - return a.a0 == b.a0 && a.a1 == b.a1; + var quad = points.length != tangents.length, path = "", p0 = points[0], p = points[1], t0 = tangents[0], t = t0, pi = 1; + if (quad) { + path += "Q" + (p[0] - t0[0] * 2 / 3) + "," + (p[1] - t0[1] * 2 / 3) + "," + p[0] + "," + p[1]; + p0 = points[1]; + pi = 2; } - function arc(r, p, a) { - return "A" + r + "," + r + " 0 " + +(a > Ï€) + ",1 " + p; + if (tangents.length > 1) { + t = tangents[1]; + p = points[pi]; + pi++; + path += "C" + (p0[0] + t0[0]) + "," + (p0[1] + t0[1]) + "," + (p[0] - t[0]) + "," + (p[1] - t[1]) + "," + p[0] + "," + p[1]; + for (var i = 2; i < tangents.length; i++, pi++) { + p = points[pi]; + t = tangents[i]; + path += "S" + (p[0] - t[0]) + "," + (p[1] - t[1]) + "," + p[0] + "," + p[1]; + } } - function curve(r0, p0, r1, p1) { - return "Q 0,0 " + p1; + if (quad) { + var lp = points[pi]; + path += "Q" + (p[0] + t[0] * 2 / 3) + "," + (p[1] + t[1] * 2 / 3) + "," + lp[0] + "," + lp[1]; } - chord.radius = function(v) { - if (!arguments.length) return radius; - radius = d3_functor(v); - return chord; - }; - chord.source = function(v) { - if (!arguments.length) return source; - source = d3_functor(v); - return chord; - }; - chord.target = function(v) { - if (!arguments.length) return target; - target = d3_functor(v); - return chord; - }; - chord.startAngle = function(v) { - if (!arguments.length) return startAngle; - startAngle = d3_functor(v); - return chord; - }; - chord.endAngle = function(v) { - if (!arguments.length) return endAngle; - endAngle = d3_functor(v); - return chord; - }; - return chord; - }; - function d3_svg_chordRadius(d) { - return d.radius; + return path; } - d3.svg.diagonal = function() { - var source = d3_source, target = d3_target, projection = d3_svg_diagonalProjection; - function diagonal(d, i) { - var p0 = source.call(this, d, i), p3 = target.call(this, d, i), m = (p0.y + p3.y) / 2, p = [ p0, { - x: p0.x, - y: m - }, { - x: p3.x, - y: m - }, p3 ]; - p = p.map(projection); - return "M" + p[0] + "C" + p[1] + " " + p[2] + " " + p[3]; + function d3_svg_lineCardinalTangents(points, tension) { + var tangents = [], a = (1 - tension) / 2, p0, p1 = points[0], p2 = points[1], i = 1, n = points.length; + while (++i < n) { + p0 = p1; + p1 = p2; + p2 = points[i]; + tangents.push([ a * (p2[0] - p0[0]), a * (p2[1] - p0[1]) ]); } - diagonal.source = function(x) { - if (!arguments.length) return source; - source = d3_functor(x); - return diagonal; - }; - diagonal.target = function(x) { - if (!arguments.length) return target; - target = d3_functor(x); - return diagonal; - }; - diagonal.projection = function(x) { - if (!arguments.length) return projection; - projection = x; - return diagonal; - }; - return diagonal; - }; - function d3_svg_diagonalProjection(d) { - return [ d.x, d.y ]; + return tangents; } - d3.svg.diagonal.radial = function() { - var diagonal = d3.svg.diagonal(), projection = d3_svg_diagonalProjection, projection_ = diagonal.projection; - diagonal.projection = function(x) { - return arguments.length ? projection_(d3_svg_diagonalRadialProjection(projection = x)) : projection; - }; - return diagonal; - }; - function d3_svg_diagonalRadialProjection(projection) { - return function() { - var d = projection.apply(this, arguments), r = d[0], a = d[1] + d3_svg_arcOffset; - return [ r * Math.cos(a), r * Math.sin(a) ]; - }; + function d3_svg_lineBasis(points) { + if (points.length < 3) return d3_svg_lineLinear(points); + var i = 1, n = points.length, pi = points[0], x0 = pi[0], y0 = pi[1], px = [ x0, x0, x0, (pi = points[1])[0] ], py = [ y0, y0, y0, pi[1] ], path = [ x0, ",", y0, "L", d3_svg_lineDot4(d3_svg_lineBasisBezier3, px), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, py) ]; + points.push(points[n - 1]); + while (++i <= n) { + pi = points[i]; + px.shift(); + px.push(pi[0]); + py.shift(); + py.push(pi[1]); + d3_svg_lineBasisBezier(path, px, py); + } + points.pop(); + path.push("L", pi); + return path.join(""); } - d3.svg.symbol = function() { - var type = d3_svg_symbolType, size = d3_svg_symbolSize; - function symbol(d, i) { - return (d3_svg_symbols.get(type.call(this, d, i)) || d3_svg_symbolCircle)(size.call(this, d, i)); + function d3_svg_lineBasisOpen(points) { + if (points.length < 4) return d3_svg_lineLinear(points); + var path = [], i = -1, n = points.length, pi, px = [ 0 ], py = [ 0 ]; + while (++i < 3) { + pi = points[i]; + px.push(pi[0]); + py.push(pi[1]); } - symbol.type = function(x) { - if (!arguments.length) return type; - type = d3_functor(x); - return symbol; - }; - symbol.size = function(x) { - if (!arguments.length) return size; - size = d3_functor(x); - return symbol; - }; - return symbol; - }; - function d3_svg_symbolSize() { - return 64; + path.push(d3_svg_lineDot4(d3_svg_lineBasisBezier3, px) + "," + d3_svg_lineDot4(d3_svg_lineBasisBezier3, py)); + --i; + while (++i < n) { + pi = points[i]; + px.shift(); + px.push(pi[0]); + py.shift(); + py.push(pi[1]); + d3_svg_lineBasisBezier(path, px, py); + } + return path.join(""); } - function d3_svg_symbolType() { - return "circle"; + function d3_svg_lineBasisClosed(points) { + var path, i = -1, n = points.length, m = n + 4, pi, px = [], py = []; + while (++i < 4) { + pi = points[i % n]; + px.push(pi[0]); + py.push(pi[1]); + } + path = [ d3_svg_lineDot4(d3_svg_lineBasisBezier3, px), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, py) ]; + --i; + while (++i < m) { + pi = points[i % n]; + px.shift(); + px.push(pi[0]); + py.shift(); + py.push(pi[1]); + d3_svg_lineBasisBezier(path, px, py); + } + return path.join(""); } - function d3_svg_symbolCircle(size) { - var r = Math.sqrt(size / Ï€); - return "M0," + r + "A" + r + "," + r + " 0 1,1 0," + -r + "A" + r + "," + r + " 0 1,1 0," + r + "Z"; + function d3_svg_lineBundle(points, tension) { + var n = points.length - 1; + if (n) { + var x0 = points[0][0], y0 = points[0][1], dx = points[n][0] - x0, dy = points[n][1] - y0, i = -1, p, t; + while (++i <= n) { + p = points[i]; + t = i / n; + p[0] = tension * p[0] + (1 - tension) * (x0 + t * dx); + p[1] = tension * p[1] + (1 - tension) * (y0 + t * dy); + } + } + return d3_svg_lineBasis(points); } - var d3_svg_symbols = d3.map({ - circle: d3_svg_symbolCircle, - cross: function(size) { - var r = Math.sqrt(size / 5) / 2; - return "M" + -3 * r + "," + -r + "H" + -r + "V" + -3 * r + "H" + r + "V" + -r + "H" + 3 * r + "V" + r + "H" + r + "V" + 3 * r + "H" + -r + "V" + r + "H" + -3 * r + "Z"; - }, - diamond: function(size) { - var ry = Math.sqrt(size / (2 * d3_svg_symbolTan30)), rx = ry * d3_svg_symbolTan30; - return "M0," + -ry + "L" + rx + ",0" + " 0," + ry + " " + -rx + ",0" + "Z"; - }, - square: function(size) { - var r = Math.sqrt(size) / 2; - return "M" + -r + "," + -r + "L" + r + "," + -r + " " + r + "," + r + " " + -r + "," + r + "Z"; - }, - "triangle-down": function(size) { - var rx = Math.sqrt(size / d3_svg_symbolSqrt3), ry = rx * d3_svg_symbolSqrt3 / 2; - return "M0," + ry + "L" + rx + "," + -ry + " " + -rx + "," + -ry + "Z"; - }, - "triangle-up": function(size) { - var rx = Math.sqrt(size / d3_svg_symbolSqrt3), ry = rx * d3_svg_symbolSqrt3 / 2; - return "M0," + -ry + "L" + rx + "," + ry + " " + -rx + "," + ry + "Z"; + function d3_svg_lineDot4(a, b) { + return a[0] * b[0] + a[1] * b[1] + a[2] * b[2] + a[3] * b[3]; + } + var d3_svg_lineBasisBezier1 = [ 0, 2 / 3, 1 / 3, 0 ], d3_svg_lineBasisBezier2 = [ 0, 1 / 3, 2 / 3, 0 ], d3_svg_lineBasisBezier3 = [ 0, 1 / 6, 2 / 3, 1 / 6 ]; + function d3_svg_lineBasisBezier(path, x, y) { + path.push("C", d3_svg_lineDot4(d3_svg_lineBasisBezier1, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier1, y), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier2, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier2, y), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, x), ",", d3_svg_lineDot4(d3_svg_lineBasisBezier3, y)); + } + function d3_svg_lineSlope(p0, p1) { + return (p1[1] - p0[1]) / (p1[0] - p0[0]); + } + function d3_svg_lineFiniteDifferences(points) { + var i = 0, j = points.length - 1, m = [], p0 = points[0], p1 = points[1], d = m[0] = d3_svg_lineSlope(p0, p1); + while (++i < j) { + m[i] = (d + (d = d3_svg_lineSlope(p0 = p1, p1 = points[i + 1]))) / 2; } - }); - d3.svg.symbolTypes = d3_svg_symbols.keys(); - var d3_svg_symbolSqrt3 = Math.sqrt(3), d3_svg_symbolTan30 = Math.tan(30 * d3_radians); - function d3_transition(groups, id) { - d3_subclass(groups, d3_transitionPrototype); - groups.id = id; - return groups; + m[i] = d; + return m; } - var d3_transitionPrototype = [], d3_transitionId = 0, d3_transitionInheritId, d3_transitionInherit; - d3_transitionPrototype.call = d3_selectionPrototype.call; - d3_transitionPrototype.empty = d3_selectionPrototype.empty; - d3_transitionPrototype.node = d3_selectionPrototype.node; - d3_transitionPrototype.size = d3_selectionPrototype.size; - d3.transition = function(selection) { - return arguments.length ? d3_transitionInheritId ? selection.transition() : selection : d3_selectionRoot.transition(); - }; - d3.transition.prototype = d3_transitionPrototype; - d3_transitionPrototype.select = function(selector) { - var id = this.id, subgroups = [], subgroup, subnode, node; - selector = d3_selection_selector(selector); - for (var j = -1, m = this.length; ++j < m; ) { - subgroups.push(subgroup = []); - for (var group = this[j], i = -1, n = group.length; ++i < n; ) { - if ((node = group[i]) && (subnode = selector.call(node, node.__data__, i, j))) { - if ("__data__" in node) subnode.__data__ = node.__data__; - d3_transitionNode(subnode, i, id, node.__transition__[id]); - subgroup.push(subnode); - } else { - subgroup.push(null); + function d3_svg_lineMonotoneTangents(points) { + var tangents = [], d, a, b, s, m = d3_svg_lineFiniteDifferences(points), i = -1, j = points.length - 1; + while (++i < j) { + d = d3_svg_lineSlope(points[i], points[i + 1]); + if (abs(d) < ε) { + m[i] = m[i + 1] = 0; + } else { + a = m[i] / d; + b = m[i + 1] / d; + s = a * a + b * b; + if (s > 9) { + s = d * 3 / Math.sqrt(s); + m[i] = s * a; + m[i + 1] = s * b; } } } - return d3_transition(subgroups, id); - }; - d3_transitionPrototype.selectAll = function(selector) { - var id = this.id, subgroups = [], subgroup, subnodes, node, subnode, transition; - selector = d3_selection_selectorAll(selector); - for (var j = -1, m = this.length; ++j < m; ) { - for (var group = this[j], i = -1, n = group.length; ++i < n; ) { - if (node = group[i]) { - transition = node.__transition__[id]; - subnodes = selector.call(node, node.__data__, i, j); - subgroups.push(subgroup = []); - for (var k = -1, o = subnodes.length; ++k < o; ) { - if (subnode = subnodes[k]) d3_transitionNode(subnode, k, id, transition); - subgroup.push(subnode); - } - } - } + i = -1; + while (++i <= j) { + s = (points[Math.min(j, i + 1)][0] - points[Math.max(0, i - 1)][0]) / (6 * (1 + m[i] * m[i])); + tangents.push([ s || 0, m[i] * s || 0 ]); } - return d3_transition(subgroups, id); + return tangents; + } + function d3_svg_lineMonotone(points) { + return points.length < 3 ? d3_svg_lineLinear(points) : points[0] + d3_svg_lineHermite(points, d3_svg_lineMonotoneTangents(points)); + } + d3.svg.line.radial = function() { + var line = d3_svg_line(d3_svg_lineRadial); + line.radius = line.x, delete line.x; + line.angle = line.y, delete line.y; + return line; }; - d3_transitionPrototype.filter = function(filter) { - var subgroups = [], subgroup, group, node; - if (typeof filter !== "function") filter = d3_selection_filter(filter); - for (var j = 0, m = this.length; j < m; j++) { - subgroups.push(subgroup = []); - for (var group = this[j], i = 0, n = group.length; i < n; i++) { - if ((node = group[i]) && filter.call(node, node.__data__, i)) { - subgroup.push(node); + function d3_svg_lineRadial(points) { + var point, i = -1, n = points.length, r, a; + while (++i < n) { + point = points[i]; + r = point[0]; + a = point[1] + d3_svg_arcOffset; + point[0] = r * Math.cos(a); + point[1] = r * Math.sin(a); + } + return points; + } + function d3_svg_area(projection) { + var x0 = d3_geom_pointX, x1 = d3_geom_pointX, y0 = 0, y1 = d3_geom_pointY, defined = d3_true, interpolate = d3_svg_lineLinear, interpolateKey = interpolate.key, interpolateReverse = interpolate, L = "L", tension = .7; + function area(data) { + var segments = [], points0 = [], points1 = [], i = -1, n = data.length, d, fx0 = d3_functor(x0), fy0 = d3_functor(y0), fx1 = x0 === x1 ? function() { + return x; + } : d3_functor(x1), fy1 = y0 === y1 ? function() { + return y; + } : d3_functor(y1), x, y; + function segment() { + segments.push("M", interpolate(projection(points1), tension), L, interpolateReverse(projection(points0.reverse()), tension), "Z"); + } + while (++i < n) { + if (defined.call(this, d = data[i], i)) { + points0.push([ x = +fx0.call(this, d, i), y = +fy0.call(this, d, i) ]); + points1.push([ +fx1.call(this, d, i), +fy1.call(this, d, i) ]); + } else if (points0.length) { + segment(); + points0 = []; + points1 = []; } } + if (points0.length) segment(); + return segments.length ? segments.join("") : null; } - return d3_transition(subgroups, this.id); + area.x = function(_) { + if (!arguments.length) return x1; + x0 = x1 = _; + return area; + }; + area.x0 = function(_) { + if (!arguments.length) return x0; + x0 = _; + return area; + }; + area.x1 = function(_) { + if (!arguments.length) return x1; + x1 = _; + return area; + }; + area.y = function(_) { + if (!arguments.length) return y1; + y0 = y1 = _; + return area; + }; + area.y0 = function(_) { + if (!arguments.length) return y0; + y0 = _; + return area; + }; + area.y1 = function(_) { + if (!arguments.length) return y1; + y1 = _; + return area; + }; + area.defined = function(_) { + if (!arguments.length) return defined; + defined = _; + return area; + }; + area.interpolate = function(_) { + if (!arguments.length) return interpolateKey; + if (typeof _ === "function") interpolateKey = interpolate = _; else interpolateKey = (interpolate = d3_svg_lineInterpolators.get(_) || d3_svg_lineLinear).key; + interpolateReverse = interpolate.reverse || interpolate; + L = interpolate.closed ? "M" : "L"; + return area; + }; + area.tension = function(_) { + if (!arguments.length) return tension; + tension = _; + return area; + }; + return area; + } + d3_svg_lineStepBefore.reverse = d3_svg_lineStepAfter; + d3_svg_lineStepAfter.reverse = d3_svg_lineStepBefore; + d3.svg.area = function() { + return d3_svg_area(d3_identity); }; - d3_transitionPrototype.tween = function(name, tween) { - var id = this.id; - if (arguments.length < 2) return this.node().__transition__[id].tween.get(name); - return d3_selection_each(this, tween == null ? function(node) { - node.__transition__[id].tween.remove(name); - } : function(node) { - node.__transition__[id].tween.set(name, tween); - }); + d3.svg.area.radial = function() { + var area = d3_svg_area(d3_svg_lineRadial); + area.radius = area.x, delete area.x; + area.innerRadius = area.x0, delete area.x0; + area.outerRadius = area.x1, delete area.x1; + area.angle = area.y, delete area.y; + area.startAngle = area.y0, delete area.y0; + area.endAngle = area.y1, delete area.y1; + return area; }; - function d3_transition_tween(groups, name, value, tween) { - var id = groups.id; - return d3_selection_each(groups, typeof value === "function" ? function(node, i, j) { - node.__transition__[id].tween.set(name, tween(value.call(node, node.__data__, i, j))); - } : (value = tween(value), function(node) { - node.__transition__[id].tween.set(name, value); - })); - } - d3_transitionPrototype.attr = function(nameNS, value) { - if (arguments.length < 2) { - for (value in nameNS) this.attr(value, nameNS[value]); - return this; + d3.svg.chord = function() { + var source = d3_source, target = d3_target, radius = d3_svg_chordRadius, startAngle = d3_svg_arcStartAngle, endAngle = d3_svg_arcEndAngle; + function chord(d, i) { + var s = subgroup(this, source, d, i), t = subgroup(this, target, d, i); + return "M" + s.p0 + arc(s.r, s.p1, s.a1 - s.a0) + (equals(s, t) ? curve(s.r, s.p1, s.r, s.p0) : curve(s.r, s.p1, t.r, t.p0) + arc(t.r, t.p1, t.a1 - t.a0) + curve(t.r, t.p1, s.r, s.p0)) + "Z"; } - var interpolate = nameNS == "transform" ? d3_interpolateTransform : d3_interpolate, name = d3.ns.qualify(nameNS); - function attrNull() { - this.removeAttribute(name); + function subgroup(self, f, d, i) { + var subgroup = f.call(self, d, i), r = radius.call(self, subgroup, i), a0 = startAngle.call(self, subgroup, i) + d3_svg_arcOffset, a1 = endAngle.call(self, subgroup, i) + d3_svg_arcOffset; + return { + r: r, + a0: a0, + a1: a1, + p0: [ r * Math.cos(a0), r * Math.sin(a0) ], + p1: [ r * Math.cos(a1), r * Math.sin(a1) ] + }; } - function attrNullNS() { - this.removeAttributeNS(name.space, name.local); + function equals(a, b) { + return a.a0 == b.a0 && a.a1 == b.a1; } - function attrTween(b) { - return b == null ? attrNull : (b += "", function() { - var a = this.getAttribute(name), i; - return a !== b && (i = interpolate(a, b), function(t) { - this.setAttribute(name, i(t)); - }); - }); + function arc(r, p, a) { + return "A" + r + "," + r + " 0 " + +(a > Ï€) + ",1 " + p; } - function attrTweenNS(b) { - return b == null ? attrNullNS : (b += "", function() { - var a = this.getAttributeNS(name.space, name.local), i; + function curve(r0, p0, r1, p1) { + return "Q 0,0 " + p1; + } + chord.radius = function(v) { + if (!arguments.length) return radius; + radius = d3_functor(v); + return chord; + }; + chord.source = function(v) { + if (!arguments.length) return source; + source = d3_functor(v); + return chord; + }; + chord.target = function(v) { + if (!arguments.length) return target; + target = d3_functor(v); + return chord; + }; + chord.startAngle = function(v) { + if (!arguments.length) return startAngle; + startAngle = d3_functor(v); + return chord; + }; + chord.endAngle = function(v) { + if (!arguments.length) return endAngle; + endAngle = d3_functor(v); + return chord; + }; + return chord; + }; + function d3_svg_chordRadius(d) { + return d.radius; + } + d3.svg.diagonal = function() { + var source = d3_source, target = d3_target, projection = d3_svg_diagonalProjection; + function diagonal(d, i) { + var p0 = source.call(this, d, i), p3 = target.call(this, d, i), m = (p0.y + p3.y) / 2, p = [ p0, { + x: p0.x, + y: m + }, { + x: p3.x, + y: m + }, p3 ]; + p = p.map(projection); + return "M" + p[0] + "C" + p[1] + " " + p[2] + " " + p[3]; + } + diagonal.source = function(x) { + if (!arguments.length) return source; + source = d3_functor(x); + return diagonal; + }; + diagonal.target = function(x) { + if (!arguments.length) return target; + target = d3_functor(x); + return diagonal; + }; + diagonal.projection = function(x) { + if (!arguments.length) return projection; + projection = x; + return diagonal; + }; + return diagonal; + }; + function d3_svg_diagonalProjection(d) { + return [ d.x, d.y ]; + } + d3.svg.diagonal.radial = function() { + var diagonal = d3.svg.diagonal(), projection = d3_svg_diagonalProjection, projection_ = diagonal.projection; + diagonal.projection = function(x) { + return arguments.length ? projection_(d3_svg_diagonalRadialProjection(projection = x)) : projection; + }; + return diagonal; + }; + function d3_svg_diagonalRadialProjection(projection) { + return function() { + var d = projection.apply(this, arguments), r = d[0], a = d[1] + d3_svg_arcOffset; + return [ r * Math.cos(a), r * Math.sin(a) ]; + }; + } + d3.svg.symbol = function() { + var type = d3_svg_symbolType, size = d3_svg_symbolSize; + function symbol(d, i) { + return (d3_svg_symbols.get(type.call(this, d, i)) || d3_svg_symbolCircle)(size.call(this, d, i)); + } + symbol.type = function(x) { + if (!arguments.length) return type; + type = d3_functor(x); + return symbol; + }; + symbol.size = function(x) { + if (!arguments.length) return size; + size = d3_functor(x); + return symbol; + }; + return symbol; + }; + function d3_svg_symbolSize() { + return 64; + } + function d3_svg_symbolType() { + return "circle"; + } + function d3_svg_symbolCircle(size) { + var r = Math.sqrt(size / Ï€); + return "M0," + r + "A" + r + "," + r + " 0 1,1 0," + -r + "A" + r + "," + r + " 0 1,1 0," + r + "Z"; + } + var d3_svg_symbols = d3.map({ + circle: d3_svg_symbolCircle, + cross: function(size) { + var r = Math.sqrt(size / 5) / 2; + return "M" + -3 * r + "," + -r + "H" + -r + "V" + -3 * r + "H" + r + "V" + -r + "H" + 3 * r + "V" + r + "H" + r + "V" + 3 * r + "H" + -r + "V" + r + "H" + -3 * r + "Z"; + }, + diamond: function(size) { + var ry = Math.sqrt(size / (2 * d3_svg_symbolTan30)), rx = ry * d3_svg_symbolTan30; + return "M0," + -ry + "L" + rx + ",0" + " 0," + ry + " " + -rx + ",0" + "Z"; + }, + square: function(size) { + var r = Math.sqrt(size) / 2; + return "M" + -r + "," + -r + "L" + r + "," + -r + " " + r + "," + r + " " + -r + "," + r + "Z"; + }, + "triangle-down": function(size) { + var rx = Math.sqrt(size / d3_svg_symbolSqrt3), ry = rx * d3_svg_symbolSqrt3 / 2; + return "M0," + ry + "L" + rx + "," + -ry + " " + -rx + "," + -ry + "Z"; + }, + "triangle-up": function(size) { + var rx = Math.sqrt(size / d3_svg_symbolSqrt3), ry = rx * d3_svg_symbolSqrt3 / 2; + return "M0," + -ry + "L" + rx + "," + ry + " " + -rx + "," + ry + "Z"; + } + }); + d3.svg.symbolTypes = d3_svg_symbols.keys(); + var d3_svg_symbolSqrt3 = Math.sqrt(3), d3_svg_symbolTan30 = Math.tan(30 * d3_radians); + function d3_transition(groups, id) { + d3_subclass(groups, d3_transitionPrototype); + groups.id = id; + return groups; + } + var d3_transitionPrototype = [], d3_transitionId = 0, d3_transitionInheritId, d3_transitionInherit; + d3_transitionPrototype.call = d3_selectionPrototype.call; + d3_transitionPrototype.empty = d3_selectionPrototype.empty; + d3_transitionPrototype.node = d3_selectionPrototype.node; + d3_transitionPrototype.size = d3_selectionPrototype.size; + d3.transition = function(selection) { + return arguments.length ? d3_transitionInheritId ? selection.transition() : selection : d3_selectionRoot.transition(); + }; + d3.transition.prototype = d3_transitionPrototype; + d3_transitionPrototype.select = function(selector) { + var id = this.id, subgroups = [], subgroup, subnode, node; + selector = d3_selection_selector(selector); + for (var j = -1, m = this.length; ++j < m; ) { + subgroups.push(subgroup = []); + for (var group = this[j], i = -1, n = group.length; ++i < n; ) { + if ((node = group[i]) && (subnode = selector.call(node, node.__data__, i, j))) { + if ("__data__" in node) subnode.__data__ = node.__data__; + d3_transitionNode(subnode, i, id, node.__transition__[id]); + subgroup.push(subnode); + } else { + subgroup.push(null); + } + } + } + return d3_transition(subgroups, id); + }; + d3_transitionPrototype.selectAll = function(selector) { + var id = this.id, subgroups = [], subgroup, subnodes, node, subnode, transition; + selector = d3_selection_selectorAll(selector); + for (var j = -1, m = this.length; ++j < m; ) { + for (var group = this[j], i = -1, n = group.length; ++i < n; ) { + if (node = group[i]) { + transition = node.__transition__[id]; + subnodes = selector.call(node, node.__data__, i, j); + subgroups.push(subgroup = []); + for (var k = -1, o = subnodes.length; ++k < o; ) { + if (subnode = subnodes[k]) d3_transitionNode(subnode, k, id, transition); + subgroup.push(subnode); + } + } + } + } + return d3_transition(subgroups, id); + }; + d3_transitionPrototype.filter = function(filter) { + var subgroups = [], subgroup, group, node; + if (typeof filter !== "function") filter = d3_selection_filter(filter); + for (var j = 0, m = this.length; j < m; j++) { + subgroups.push(subgroup = []); + for (var group = this[j], i = 0, n = group.length; i < n; i++) { + if ((node = group[i]) && filter.call(node, node.__data__, i, j)) { + subgroup.push(node); + } + } + } + return d3_transition(subgroups, this.id); + }; + d3_transitionPrototype.tween = function(name, tween) { + var id = this.id; + if (arguments.length < 2) return this.node().__transition__[id].tween.get(name); + return d3_selection_each(this, tween == null ? function(node) { + node.__transition__[id].tween.remove(name); + } : function(node) { + node.__transition__[id].tween.set(name, tween); + }); + }; + function d3_transition_tween(groups, name, value, tween) { + var id = groups.id; + return d3_selection_each(groups, typeof value === "function" ? function(node, i, j) { + node.__transition__[id].tween.set(name, tween(value.call(node, node.__data__, i, j))); + } : (value = tween(value), function(node) { + node.__transition__[id].tween.set(name, value); + })); + } + d3_transitionPrototype.attr = function(nameNS, value) { + if (arguments.length < 2) { + for (value in nameNS) this.attr(value, nameNS[value]); + return this; + } + var interpolate = nameNS == "transform" ? d3_interpolateTransform : d3_interpolate, name = d3.ns.qualify(nameNS); + function attrNull() { + this.removeAttribute(name); + } + function attrNullNS() { + this.removeAttributeNS(name.space, name.local); + } + function attrTween(b) { + return b == null ? attrNull : (b += "", function() { + var a = this.getAttribute(name), i; + return a !== b && (i = interpolate(a, b), function(t) { + this.setAttribute(name, i(t)); + }); + }); + } + function attrTweenNS(b) { + return b == null ? attrNullNS : (b += "", function() { + var a = this.getAttributeNS(name.space, name.local), i; return a !== b && (i = interpolate(a, b), function(t) { this.setAttributeNS(name.space, name.local, i(t)); }); @@ -7848,9 +8621,10 @@ d3 = function() { }; ++lock.count; d3.timer(function(elapsed) { - var d = node.__data__, ease = transition.ease, delay = transition.delay, duration = transition.duration, tweened = []; + var d = node.__data__, ease = transition.ease, delay = transition.delay, duration = transition.duration, timer = d3_timer_active, tweened = []; + timer.t = delay + time; if (delay <= elapsed) return start(elapsed - delay); - d3_timer_replace(start, delay, time); + timer.c = start; function start(elapsed) { if (lock.active > id) return stop(); lock.active = id; @@ -7860,8 +8634,10 @@ d3 = function() { tweened.push(value); } }); - if (tick(elapsed || 1)) return 1; - d3_timer_replace(tick, delay, time); + d3.timer(function() { + timer.c = tick(elapsed || 1) ? d3_true : tick; + return 1; + }, 0, time); } function tick(elapsed) { if (lock.active !== id) return stop(); @@ -7943,16 +8719,17 @@ d3 = function() { } } if (scale1.rangeBand) { - var dx = scale1.rangeBand() / 2, x = function(d) { - return scale1(d) + dx; + var x = scale1, dx = x.rangeBand() / 2; + scale0 = scale1 = function(d) { + return x(d) + dx; }; - tickEnter.call(tickTransform, x); - tickUpdate.call(tickTransform, x); + } else if (scale0.rangeBand) { + scale0 = scale1; } else { - tickEnter.call(tickTransform, scale0); - tickUpdate.call(tickTransform, scale1); tickExit.call(tickTransform, scale1); } + tickEnter.call(tickTransform, scale0); + tickUpdate.call(tickTransform, scale1); }); } axis.scale = function(x) { @@ -8225,579 +9002,96 @@ d3 = function() { brushmove(); g.style("pointer-events", "all").selectAll(".resize").style("display", brush.empty() ? "none" : null); d3.select("body").style("cursor", null); - w.on("mousemove.brush", null).on("mouseup.brush", null).on("touchmove.brush", null).on("touchend.brush", null).on("keydown.brush", null).on("keyup.brush", null); - dragRestore(); - event_({ - type: "brushend" - }); - } - } - brush.x = function(z) { - if (!arguments.length) return x; - x = z; - resizes = d3_svg_brushResizes[!x << 1 | !y]; - return brush; - }; - brush.y = function(z) { - if (!arguments.length) return y; - y = z; - resizes = d3_svg_brushResizes[!x << 1 | !y]; - return brush; - }; - brush.clamp = function(z) { - if (!arguments.length) return x && y ? [ xClamp, yClamp ] : x ? xClamp : y ? yClamp : null; - if (x && y) xClamp = !!z[0], yClamp = !!z[1]; else if (x) xClamp = !!z; else if (y) yClamp = !!z; - return brush; - }; - brush.extent = function(z) { - var x0, x1, y0, y1, t; - if (!arguments.length) { - if (x) { - if (xExtentDomain) { - x0 = xExtentDomain[0], x1 = xExtentDomain[1]; - } else { - x0 = xExtent[0], x1 = xExtent[1]; - if (x.invert) x0 = x.invert(x0), x1 = x.invert(x1); - if (x1 < x0) t = x0, x0 = x1, x1 = t; - } - } - if (y) { - if (yExtentDomain) { - y0 = yExtentDomain[0], y1 = yExtentDomain[1]; - } else { - y0 = yExtent[0], y1 = yExtent[1]; - if (y.invert) y0 = y.invert(y0), y1 = y.invert(y1); - if (y1 < y0) t = y0, y0 = y1, y1 = t; - } - } - return x && y ? [ [ x0, y0 ], [ x1, y1 ] ] : x ? [ x0, x1 ] : y && [ y0, y1 ]; - } - if (x) { - x0 = z[0], x1 = z[1]; - if (y) x0 = x0[0], x1 = x1[0]; - xExtentDomain = [ x0, x1 ]; - if (x.invert) x0 = x(x0), x1 = x(x1); - if (x1 < x0) t = x0, x0 = x1, x1 = t; - if (x0 != xExtent[0] || x1 != xExtent[1]) xExtent = [ x0, x1 ]; - } - if (y) { - y0 = z[0], y1 = z[1]; - if (x) y0 = y0[1], y1 = y1[1]; - yExtentDomain = [ y0, y1 ]; - if (y.invert) y0 = y(y0), y1 = y(y1); - if (y1 < y0) t = y0, y0 = y1, y1 = t; - if (y0 != yExtent[0] || y1 != yExtent[1]) yExtent = [ y0, y1 ]; - } - return brush; - }; - brush.clear = function() { - if (!brush.empty()) { - xExtent = [ 0, 0 ], yExtent = [ 0, 0 ]; - xExtentDomain = yExtentDomain = null; - } - return brush; - }; - brush.empty = function() { - return !!x && xExtent[0] == xExtent[1] || !!y && yExtent[0] == yExtent[1]; - }; - return d3.rebind(brush, event, "on"); - }; - var d3_svg_brushCursor = { - n: "ns-resize", - e: "ew-resize", - s: "ns-resize", - w: "ew-resize", - nw: "nwse-resize", - ne: "nesw-resize", - se: "nwse-resize", - sw: "nesw-resize" - }; - var d3_svg_brushResizes = [ [ "n", "e", "s", "w", "nw", "ne", "se", "sw" ], [ "e", "w" ], [ "n", "s" ], [] ]; - var d3_time = d3.time = {}, d3_date = Date, d3_time_daySymbols = [ "Sunday", "Monday", "Tuesday", "Wednesday", "Thursday", "Friday", "Saturday" ]; - function d3_date_utc() { - this._ = new Date(arguments.length > 1 ? Date.UTC.apply(this, arguments) : arguments[0]); - } - d3_date_utc.prototype = { - getDate: function() { - return this._.getUTCDate(); - }, - getDay: function() { - return this._.getUTCDay(); - }, - getFullYear: function() { - return this._.getUTCFullYear(); - }, - getHours: function() { - return this._.getUTCHours(); - }, - getMilliseconds: function() { - return this._.getUTCMilliseconds(); - }, - getMinutes: function() { - return this._.getUTCMinutes(); - }, - getMonth: function() { - return this._.getUTCMonth(); - }, - getSeconds: function() { - return this._.getUTCSeconds(); - }, - getTime: function() { - return this._.getTime(); - }, - getTimezoneOffset: function() { - return 0; - }, - valueOf: function() { - return this._.valueOf(); - }, - setDate: function() { - d3_time_prototype.setUTCDate.apply(this._, arguments); - }, - setDay: function() { - d3_time_prototype.setUTCDay.apply(this._, arguments); - }, - setFullYear: function() { - d3_time_prototype.setUTCFullYear.apply(this._, arguments); - }, - setHours: function() { - d3_time_prototype.setUTCHours.apply(this._, arguments); - }, - setMilliseconds: function() { - d3_time_prototype.setUTCMilliseconds.apply(this._, arguments); - }, - setMinutes: function() { - d3_time_prototype.setUTCMinutes.apply(this._, arguments); - }, - setMonth: function() { - d3_time_prototype.setUTCMonth.apply(this._, arguments); - }, - setSeconds: function() { - d3_time_prototype.setUTCSeconds.apply(this._, arguments); - }, - setTime: function() { - d3_time_prototype.setTime.apply(this._, arguments); - } - }; - var d3_time_prototype = Date.prototype; - var d3_time_formatDateTime = "%a %b %e %X %Y", d3_time_formatDate = "%m/%d/%Y", d3_time_formatTime = "%H:%M:%S"; - var d3_time_days = [ "Sunday", "Monday", "Tuesday", "Wednesday", "Thursday", "Friday", "Saturday" ], d3_time_dayAbbreviations = [ "Sun", "Mon", "Tue", "Wed", "Thu", "Fri", "Sat" ], d3_time_months = [ "January", "February", "March", "April", "May", "June", "July", "August", "September", "October", "November", "December" ], d3_time_monthAbbreviations = [ "Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec" ]; - function d3_time_interval(local, step, number) { - function round(date) { - var d0 = local(date), d1 = offset(d0, 1); - return date - d0 < d1 - date ? d0 : d1; - } - function ceil(date) { - step(date = local(new d3_date(date - 1)), 1); - return date; - } - function offset(date, k) { - step(date = new d3_date(+date), k); - return date; - } - function range(t0, t1, dt) { - var time = ceil(t0), times = []; - if (dt > 1) { - while (time < t1) { - if (!(number(time) % dt)) times.push(new Date(+time)); - step(time, 1); - } - } else { - while (time < t1) times.push(new Date(+time)), step(time, 1); - } - return times; - } - function range_utc(t0, t1, dt) { - try { - d3_date = d3_date_utc; - var utc = new d3_date_utc(); - utc._ = t0; - return range(utc, t1, dt); - } finally { - d3_date = Date; - } - } - local.floor = local; - local.round = round; - local.ceil = ceil; - local.offset = offset; - local.range = range; - var utc = local.utc = d3_time_interval_utc(local); - utc.floor = utc; - utc.round = d3_time_interval_utc(round); - utc.ceil = d3_time_interval_utc(ceil); - utc.offset = d3_time_interval_utc(offset); - utc.range = range_utc; - return local; - } - function d3_time_interval_utc(method) { - return function(date, k) { - try { - d3_date = d3_date_utc; - var utc = new d3_date_utc(); - utc._ = date; - return method(utc, k)._; - } finally { - d3_date = Date; - } - }; - } - d3_time.year = d3_time_interval(function(date) { - date = d3_time.day(date); - date.setMonth(0, 1); - return date; - }, function(date, offset) { - date.setFullYear(date.getFullYear() + offset); - }, function(date) { - return date.getFullYear(); - }); - d3_time.years = d3_time.year.range; - d3_time.years.utc = d3_time.year.utc.range; - d3_time.day = d3_time_interval(function(date) { - var day = new d3_date(2e3, 0); - day.setFullYear(date.getFullYear(), date.getMonth(), date.getDate()); - return day; - }, function(date, offset) { - date.setDate(date.getDate() + offset); - }, function(date) { - return date.getDate() - 1; - }); - d3_time.days = d3_time.day.range; - d3_time.days.utc = d3_time.day.utc.range; - d3_time.dayOfYear = function(date) { - var year = d3_time.year(date); - return Math.floor((date - year - (date.getTimezoneOffset() - year.getTimezoneOffset()) * 6e4) / 864e5); - }; - d3_time_daySymbols.forEach(function(day, i) { - day = day.toLowerCase(); - i = 7 - i; - var interval = d3_time[day] = d3_time_interval(function(date) { - (date = d3_time.day(date)).setDate(date.getDate() - (date.getDay() + i) % 7); - return date; - }, function(date, offset) { - date.setDate(date.getDate() + Math.floor(offset) * 7); - }, function(date) { - var day = d3_time.year(date).getDay(); - return Math.floor((d3_time.dayOfYear(date) + (day + i) % 7) / 7) - (day !== i); - }); - d3_time[day + "s"] = interval.range; - d3_time[day + "s"].utc = interval.utc.range; - d3_time[day + "OfYear"] = function(date) { - var day = d3_time.year(date).getDay(); - return Math.floor((d3_time.dayOfYear(date) + (day + i) % 7) / 7); - }; - }); - d3_time.week = d3_time.sunday; - d3_time.weeks = d3_time.sunday.range; - d3_time.weeks.utc = d3_time.sunday.utc.range; - d3_time.weekOfYear = d3_time.sundayOfYear; - d3_time.format = d3_time_format; - function d3_time_format(template) { - var n = template.length; - function format(date) { - var string = [], i = -1, j = 0, c, p, f; - while (++i < n) { - if (template.charCodeAt(i) === 37) { - string.push(template.substring(j, i)); - if ((p = d3_time_formatPads[c = template.charAt(++i)]) != null) c = template.charAt(++i); - if (f = d3_time_formats[c]) c = f(date, p == null ? c === "e" ? " " : "0" : p); - string.push(c); - j = i + 1; - } - } - string.push(template.substring(j, i)); - return string.join(""); - } - format.parse = function(string) { - var d = { - y: 1900, - m: 0, - d: 1, - H: 0, - M: 0, - S: 0, - L: 0, - Z: null - }, i = d3_time_parse(d, template, string, 0); - if (i != string.length) return null; - if ("p" in d) d.H = d.H % 12 + d.p * 12; - var localZ = d.Z != null && d3_date !== d3_date_utc, date = new (localZ ? d3_date_utc : d3_date)(); - if ("j" in d) date.setFullYear(d.y, 0, d.j); else if ("w" in d && ("W" in d || "U" in d)) { - date.setFullYear(d.y, 0, 1); - date.setFullYear(d.y, 0, "W" in d ? (d.w + 6) % 7 + d.W * 7 - (date.getDay() + 5) % 7 : d.w + d.U * 7 - (date.getDay() + 6) % 7); - } else date.setFullYear(d.y, d.m, d.d); - date.setHours(d.H + Math.floor(d.Z / 100), d.M + d.Z % 100, d.S, d.L); - return localZ ? date._ : date; - }; - format.toString = function() { - return template; - }; - return format; - } - function d3_time_parse(date, template, string, j) { - var c, p, t, i = 0, n = template.length, m = string.length; - while (i < n) { - if (j >= m) return -1; - c = template.charCodeAt(i++); - if (c === 37) { - t = template.charAt(i++); - p = d3_time_parsers[t in d3_time_formatPads ? template.charAt(i++) : t]; - if (!p || (j = p(date, string, j)) < 0) return -1; - } else if (c != string.charCodeAt(j++)) { - return -1; + w.on("mousemove.brush", null).on("mouseup.brush", null).on("touchmove.brush", null).on("touchend.brush", null).on("keydown.brush", null).on("keyup.brush", null); + dragRestore(); + event_({ + type: "brushend" + }); } } - return j; - } - function d3_time_formatRe(names) { - return new RegExp("^(?:" + names.map(d3.requote).join("|") + ")", "i"); - } - function d3_time_formatLookup(names) { - var map = new d3_Map(), i = -1, n = names.length; - while (++i < n) map.set(names[i].toLowerCase(), i); - return map; - } - function d3_time_formatPad(value, fill, width) { - var sign = value < 0 ? "-" : "", string = (sign ? -value : value) + "", length = string.length; - return sign + (length < width ? new Array(width - length + 1).join(fill) + string : string); - } - var d3_time_dayRe = d3_time_formatRe(d3_time_days), d3_time_dayLookup = d3_time_formatLookup(d3_time_days), d3_time_dayAbbrevRe = d3_time_formatRe(d3_time_dayAbbreviations), d3_time_dayAbbrevLookup = d3_time_formatLookup(d3_time_dayAbbreviations), d3_time_monthRe = d3_time_formatRe(d3_time_months), d3_time_monthLookup = d3_time_formatLookup(d3_time_months), d3_time_monthAbbrevRe = d3_time_formatRe(d3_time_monthAbbreviations), d3_time_monthAbbrevLookup = d3_time_formatLookup(d3_time_monthAbbreviations), d3_time_percentRe = /^%/; - var d3_time_formatPads = { - "-": "", - _: " ", - "0": "0" - }; - var d3_time_formats = { - a: function(d) { - return d3_time_dayAbbreviations[d.getDay()]; - }, - A: function(d) { - return d3_time_days[d.getDay()]; - }, - b: function(d) { - return d3_time_monthAbbreviations[d.getMonth()]; - }, - B: function(d) { - return d3_time_months[d.getMonth()]; - }, - c: d3_time_format(d3_time_formatDateTime), - d: function(d, p) { - return d3_time_formatPad(d.getDate(), p, 2); - }, - e: function(d, p) { - return d3_time_formatPad(d.getDate(), p, 2); - }, - H: function(d, p) { - return d3_time_formatPad(d.getHours(), p, 2); - }, - I: function(d, p) { - return d3_time_formatPad(d.getHours() % 12 || 12, p, 2); - }, - j: function(d, p) { - return d3_time_formatPad(1 + d3_time.dayOfYear(d), p, 3); - }, - L: function(d, p) { - return d3_time_formatPad(d.getMilliseconds(), p, 3); - }, - m: function(d, p) { - return d3_time_formatPad(d.getMonth() + 1, p, 2); - }, - M: function(d, p) { - return d3_time_formatPad(d.getMinutes(), p, 2); - }, - p: function(d) { - return d.getHours() >= 12 ? "PM" : "AM"; - }, - S: function(d, p) { - return d3_time_formatPad(d.getSeconds(), p, 2); - }, - U: function(d, p) { - return d3_time_formatPad(d3_time.sundayOfYear(d), p, 2); - }, - w: function(d) { - return d.getDay(); - }, - W: function(d, p) { - return d3_time_formatPad(d3_time.mondayOfYear(d), p, 2); - }, - x: d3_time_format(d3_time_formatDate), - X: d3_time_format(d3_time_formatTime), - y: function(d, p) { - return d3_time_formatPad(d.getFullYear() % 100, p, 2); - }, - Y: function(d, p) { - return d3_time_formatPad(d.getFullYear() % 1e4, p, 4); - }, - Z: d3_time_zone, - "%": function() { - return "%"; - } - }; - var d3_time_parsers = { - a: d3_time_parseWeekdayAbbrev, - A: d3_time_parseWeekday, - b: d3_time_parseMonthAbbrev, - B: d3_time_parseMonth, - c: d3_time_parseLocaleFull, - d: d3_time_parseDay, - e: d3_time_parseDay, - H: d3_time_parseHour24, - I: d3_time_parseHour24, - j: d3_time_parseDayOfYear, - L: d3_time_parseMilliseconds, - m: d3_time_parseMonthNumber, - M: d3_time_parseMinutes, - p: d3_time_parseAmPm, - S: d3_time_parseSeconds, - U: d3_time_parseWeekNumberSunday, - w: d3_time_parseWeekdayNumber, - W: d3_time_parseWeekNumberMonday, - x: d3_time_parseLocaleDate, - X: d3_time_parseLocaleTime, - y: d3_time_parseYear, - Y: d3_time_parseFullYear, - Z: d3_time_parseZone, - "%": d3_time_parseLiteralPercent - }; - function d3_time_parseWeekdayAbbrev(date, string, i) { - d3_time_dayAbbrevRe.lastIndex = 0; - var n = d3_time_dayAbbrevRe.exec(string.substring(i)); - return n ? (date.w = d3_time_dayAbbrevLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; - } - function d3_time_parseWeekday(date, string, i) { - d3_time_dayRe.lastIndex = 0; - var n = d3_time_dayRe.exec(string.substring(i)); - return n ? (date.w = d3_time_dayLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; - } - function d3_time_parseWeekdayNumber(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 1)); - return n ? (date.w = +n[0], i + n[0].length) : -1; - } - function d3_time_parseWeekNumberSunday(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i)); - return n ? (date.U = +n[0], i + n[0].length) : -1; - } - function d3_time_parseWeekNumberMonday(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i)); - return n ? (date.W = +n[0], i + n[0].length) : -1; - } - function d3_time_parseMonthAbbrev(date, string, i) { - d3_time_monthAbbrevRe.lastIndex = 0; - var n = d3_time_monthAbbrevRe.exec(string.substring(i)); - return n ? (date.m = d3_time_monthAbbrevLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; - } - function d3_time_parseMonth(date, string, i) { - d3_time_monthRe.lastIndex = 0; - var n = d3_time_monthRe.exec(string.substring(i)); - return n ? (date.m = d3_time_monthLookup.get(n[0].toLowerCase()), i + n[0].length) : -1; - } - function d3_time_parseLocaleFull(date, string, i) { - return d3_time_parse(date, d3_time_formats.c.toString(), string, i); - } - function d3_time_parseLocaleDate(date, string, i) { - return d3_time_parse(date, d3_time_formats.x.toString(), string, i); - } - function d3_time_parseLocaleTime(date, string, i) { - return d3_time_parse(date, d3_time_formats.X.toString(), string, i); - } - function d3_time_parseFullYear(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 4)); - return n ? (date.y = +n[0], i + n[0].length) : -1; - } - function d3_time_parseYear(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.y = d3_time_expandYear(+n[0]), i + n[0].length) : -1; - } - function d3_time_parseZone(date, string, i) { - return /^[+-]\d{4}$/.test(string = string.substring(i, i + 5)) ? (date.Z = +string, - i + 5) : -1; - } - function d3_time_expandYear(d) { - return d + (d > 68 ? 1900 : 2e3); - } - function d3_time_parseMonthNumber(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.m = n[0] - 1, i + n[0].length) : -1; - } - function d3_time_parseDay(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.d = +n[0], i + n[0].length) : -1; - } - function d3_time_parseDayOfYear(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 3)); - return n ? (date.j = +n[0], i + n[0].length) : -1; - } - function d3_time_parseHour24(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.H = +n[0], i + n[0].length) : -1; - } - function d3_time_parseMinutes(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.M = +n[0], i + n[0].length) : -1; - } - function d3_time_parseSeconds(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 2)); - return n ? (date.S = +n[0], i + n[0].length) : -1; - } - function d3_time_parseMilliseconds(date, string, i) { - d3_time_numberRe.lastIndex = 0; - var n = d3_time_numberRe.exec(string.substring(i, i + 3)); - return n ? (date.L = +n[0], i + n[0].length) : -1; - } - var d3_time_numberRe = /^\s*\d+/; - function d3_time_parseAmPm(date, string, i) { - var n = d3_time_amPmLookup.get(string.substring(i, i += 2).toLowerCase()); - return n == null ? -1 : (date.p = n, i); - } - var d3_time_amPmLookup = d3.map({ - am: 0, - pm: 1 - }); - function d3_time_zone(d) { - var z = d.getTimezoneOffset(), zs = z > 0 ? "-" : "+", zh = ~~(Math.abs(z) / 60), zm = Math.abs(z) % 60; - return zs + d3_time_formatPad(zh, "0", 2) + d3_time_formatPad(zm, "0", 2); - } - function d3_time_parseLiteralPercent(date, string, i) { - d3_time_percentRe.lastIndex = 0; - var n = d3_time_percentRe.exec(string.substring(i, i + 1)); - return n ? i + n[0].length : -1; - } - d3_time_format.utc = d3_time_formatUtc; - function d3_time_formatUtc(template) { - var local = d3_time_format(template); - function format(date) { - try { - d3_date = d3_date_utc; - var utc = new d3_date(); - utc._ = date; - return local(utc); - } finally { - d3_date = Date; + brush.x = function(z) { + if (!arguments.length) return x; + x = z; + resizes = d3_svg_brushResizes[!x << 1 | !y]; + return brush; + }; + brush.y = function(z) { + if (!arguments.length) return y; + y = z; + resizes = d3_svg_brushResizes[!x << 1 | !y]; + return brush; + }; + brush.clamp = function(z) { + if (!arguments.length) return x && y ? [ xClamp, yClamp ] : x ? xClamp : y ? yClamp : null; + if (x && y) xClamp = !!z[0], yClamp = !!z[1]; else if (x) xClamp = !!z; else if (y) yClamp = !!z; + return brush; + }; + brush.extent = function(z) { + var x0, x1, y0, y1, t; + if (!arguments.length) { + if (x) { + if (xExtentDomain) { + x0 = xExtentDomain[0], x1 = xExtentDomain[1]; + } else { + x0 = xExtent[0], x1 = xExtent[1]; + if (x.invert) x0 = x.invert(x0), x1 = x.invert(x1); + if (x1 < x0) t = x0, x0 = x1, x1 = t; + } + } + if (y) { + if (yExtentDomain) { + y0 = yExtentDomain[0], y1 = yExtentDomain[1]; + } else { + y0 = yExtent[0], y1 = yExtent[1]; + if (y.invert) y0 = y.invert(y0), y1 = y.invert(y1); + if (y1 < y0) t = y0, y0 = y1, y1 = t; + } + } + return x && y ? [ [ x0, y0 ], [ x1, y1 ] ] : x ? [ x0, x1 ] : y && [ y0, y1 ]; } - } - format.parse = function(string) { - try { - d3_date = d3_date_utc; - var date = local.parse(string); - return date && date._; - } finally { - d3_date = Date; + if (x) { + x0 = z[0], x1 = z[1]; + if (y) x0 = x0[0], x1 = x1[0]; + xExtentDomain = [ x0, x1 ]; + if (x.invert) x0 = x(x0), x1 = x(x1); + if (x1 < x0) t = x0, x0 = x1, x1 = t; + if (x0 != xExtent[0] || x1 != xExtent[1]) xExtent = [ x0, x1 ]; + } + if (y) { + y0 = z[0], y1 = z[1]; + if (x) y0 = y0[1], y1 = y1[1]; + yExtentDomain = [ y0, y1 ]; + if (y.invert) y0 = y(y0), y1 = y(y1); + if (y1 < y0) t = y0, y0 = y1, y1 = t; + if (y0 != yExtent[0] || y1 != yExtent[1]) yExtent = [ y0, y1 ]; } + return brush; }; - format.toString = local.toString; - return format; - } + brush.clear = function() { + if (!brush.empty()) { + xExtent = [ 0, 0 ], yExtent = [ 0, 0 ]; + xExtentDomain = yExtentDomain = null; + } + return brush; + }; + brush.empty = function() { + return !!x && xExtent[0] == xExtent[1] || !!y && yExtent[0] == yExtent[1]; + }; + return d3.rebind(brush, event, "on"); + }; + var d3_svg_brushCursor = { + n: "ns-resize", + e: "ew-resize", + s: "ns-resize", + w: "ew-resize", + nw: "nwse-resize", + ne: "nesw-resize", + se: "nwse-resize", + sw: "nesw-resize" + }; + var d3_svg_brushResizes = [ [ "n", "e", "s", "w", "nw", "ne", "se", "sw" ], [ "e", "w" ], [ "n", "s" ], [] ]; + var d3_time_format = d3_time.format = d3_locale_enUS.timeFormat; + var d3_time_formatUtc = d3_time_format.utc; var d3_time_formatIso = d3_time_formatUtc("%Y-%m-%dT%H:%M:%S.%LZ"); d3_time_format.iso = Date.prototype.toISOString && +new Date("2000-01-01T00:00:00.000Z") ? d3_time_formatIsoNative : d3_time_formatIso; function d3_time_formatIsoNative(date) { @@ -8900,62 +9194,55 @@ d3 = function() { function d3_time_scaleDate(t) { return new Date(t); } - function d3_time_scaleFormat(formats) { - return function(date) { - var i = formats.length - 1, f = formats[i]; - while (!f[1](date)) f = formats[--i]; - return f[0](date); - }; - } var d3_time_scaleSteps = [ 1e3, 5e3, 15e3, 3e4, 6e4, 3e5, 9e5, 18e5, 36e5, 108e5, 216e5, 432e5, 864e5, 1728e5, 6048e5, 2592e6, 7776e6, 31536e6 ]; var d3_time_scaleLocalMethods = [ [ d3_time.second, 1 ], [ d3_time.second, 5 ], [ d3_time.second, 15 ], [ d3_time.second, 30 ], [ d3_time.minute, 1 ], [ d3_time.minute, 5 ], [ d3_time.minute, 15 ], [ d3_time.minute, 30 ], [ d3_time.hour, 1 ], [ d3_time.hour, 3 ], [ d3_time.hour, 6 ], [ d3_time.hour, 12 ], [ d3_time.day, 1 ], [ d3_time.day, 2 ], [ d3_time.week, 1 ], [ d3_time.month, 1 ], [ d3_time.month, 3 ], [ d3_time.year, 1 ] ]; - var d3_time_scaleLocalFormats = [ [ d3_time_format("%Y"), d3_true ], [ d3_time_format("%B"), function(d) { - return d.getMonth(); - } ], [ d3_time_format("%b %d"), function(d) { - return d.getDate() != 1; - } ], [ d3_time_format("%a %d"), function(d) { - return d.getDay() && d.getDate() != 1; - } ], [ d3_time_format("%I %p"), function(d) { - return d.getHours(); - } ], [ d3_time_format("%I:%M"), function(d) { - return d.getMinutes(); - } ], [ d3_time_format(":%S"), function(d) { - return d.getSeconds(); - } ], [ d3_time_format(".%L"), function(d) { + var d3_time_scaleLocalFormat = d3_time_format.multi([ [ ".%L", function(d) { return d.getMilliseconds(); - } ] ]; - var d3_time_scaleLocalFormat = d3_time_scaleFormat(d3_time_scaleLocalFormats); - d3_time_scaleLocalMethods.year = d3_time.year; - d3_time.scale = function() { - return d3_time_scale(d3.scale.linear(), d3_time_scaleLocalMethods, d3_time_scaleLocalFormat); - }; + } ], [ ":%S", function(d) { + return d.getSeconds(); + } ], [ "%I:%M", function(d) { + return d.getMinutes(); + } ], [ "%I %p", function(d) { + return d.getHours(); + } ], [ "%a %d", function(d) { + return d.getDay() && d.getDate() != 1; + } ], [ "%b %d", function(d) { + return d.getDate() != 1; + } ], [ "%B", function(d) { + return d.getMonth(); + } ], [ "%Y", d3_true ] ]); var d3_time_scaleMilliseconds = { range: function(start, stop, step) { return d3.range(+start, +stop, step).map(d3_time_scaleDate); - } + }, + floor: d3_identity, + ceil: d3_identity + }; + d3_time_scaleLocalMethods.year = d3_time.year; + d3_time.scale = function() { + return d3_time_scale(d3.scale.linear(), d3_time_scaleLocalMethods, d3_time_scaleLocalFormat); }; - var d3_time_scaleUTCMethods = d3_time_scaleLocalMethods.map(function(m) { + var d3_time_scaleUtcMethods = d3_time_scaleLocalMethods.map(function(m) { return [ m[0].utc, m[1] ]; }); - var d3_time_scaleUTCFormats = [ [ d3_time_formatUtc("%Y"), d3_true ], [ d3_time_formatUtc("%B"), function(d) { - return d.getUTCMonth(); - } ], [ d3_time_formatUtc("%b %d"), function(d) { - return d.getUTCDate() != 1; - } ], [ d3_time_formatUtc("%a %d"), function(d) { - return d.getUTCDay() && d.getUTCDate() != 1; - } ], [ d3_time_formatUtc("%I %p"), function(d) { - return d.getUTCHours(); - } ], [ d3_time_formatUtc("%I:%M"), function(d) { - return d.getUTCMinutes(); - } ], [ d3_time_formatUtc(":%S"), function(d) { - return d.getUTCSeconds(); - } ], [ d3_time_formatUtc(".%L"), function(d) { + var d3_time_scaleUtcFormat = d3_time_formatUtc.multi([ [ ".%L", function(d) { return d.getUTCMilliseconds(); - } ] ]; - var d3_time_scaleUTCFormat = d3_time_scaleFormat(d3_time_scaleUTCFormats); - d3_time_scaleUTCMethods.year = d3_time.year.utc; + } ], [ ":%S", function(d) { + return d.getUTCSeconds(); + } ], [ "%I:%M", function(d) { + return d.getUTCMinutes(); + } ], [ "%I %p", function(d) { + return d.getUTCHours(); + } ], [ "%a %d", function(d) { + return d.getUTCDay() && d.getUTCDate() != 1; + } ], [ "%b %d", function(d) { + return d.getUTCDate() != 1; + } ], [ "%B", function(d) { + return d.getUTCMonth(); + } ], [ "%Y", d3_true ] ]); + d3_time_scaleUtcMethods.year = d3_time.year.utc; d3_time.scale.utc = function() { - return d3_time_scale(d3.scale.linear(), d3_time_scaleUTCMethods, d3_time_scaleUTCFormat); + return d3_time_scale(d3.scale.linear(), d3_time_scaleUtcMethods, d3_time_scaleUtcFormat); }; d3.text = d3_xhrType(function(request) { return request.responseText; @@ -8977,5 +9264,11 @@ d3 = function() { d3.xml = d3_xhrType(function(request) { return request.responseXML; }); - return d3; + if (typeof define === "function" && define.amd) { + define(d3); + } else if (typeof module === "object" && module.exports) { + module.exports = d3; + } else { + this.d3 = d3; + } }(); \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.min.js b/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.min.js index 77615c0cf1..8cfc9ef3f4 100644 --- a/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.min.js +++ b/ThirdParty/Ert/devel/share/gui/plots/libs/d3.v3.min.js @@ -1,5 +1,5 @@ -d3=function(){function n(n){return null!=n&&!isNaN(n)}function t(n){return n.length}function e(n){for(var t=1;n*t%1;)t*=10;return t}function r(n,t){try{for(var e in 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a/ThirdParty/Ert/devel/share/gui/plots/rft.html b/ThirdParty/Ert/devel/share/gui/plots/rft.html new file mode 100644 index 0000000000..c84775d54e --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/rft.html @@ -0,0 +1,162 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/rft_overview.html b/ThirdParty/Ert/devel/share/gui/plots/rft_overview.html new file mode 100644 index 0000000000..f73115fab0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/rft_overview.html @@ -0,0 +1,160 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot.js new file mode 100644 index 0000000000..ed70241950 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot.js @@ -0,0 +1,440 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'base_plot.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function BasePlot(element, x_dimension, y_dimension) { + this.stored_data = null; + this.margin = {left: 90, right: 20, top: 20, bottom: 30}; + this.root_elemenet = element; + + this.render_observations = true; + this.render_refcase = true; + + this.custom_y_min = null; + this.custom_y_max = null; + this.custom_x_min = null; + this.custom_x_max = null; + + this.render_finished = false; + this.render_callback_finished = false; + this.rendering_finished_callback = null; + + this.pre_render_callback = null; + this.render_callback = null; + + this.dimension_x = x_dimension; + this.dimension_y = y_dimension; + + this.vertical_error_bar = true; + this.error_bar_only = false; + + var group = this.root_elemenet.append("div") + .attr("class", "plot"); + + this.title = group.append("div") + .attr("class", "plot-title") + .text(this.getTitle()); + + this.axis_label_group = group.append("div") + .attr("id", "axis-label-group") + + this.x_label = this.axis_label_group.append("div") + .attr("class", "x axis-label") + .text("") + + this.y_label = this.axis_label_group.append("div") + .attr("class", "y axis-label") + .text(""); + + var plot_area = group.append("div").attr("class", "plot-area"); + + this.width = 1024 - this.margin.left - this.margin.right; + this.height = 512 - this.margin.top - this.margin.bottom; + + this.canvas = plot_area.append("canvas") + .attr("id", "plot-canvas") + .attr("width", this.width) + .attr("height", this.height) + .style("position", "absolute") + .style("top", (this.margin.top) + "px") + .style("left", (this.margin.left) + "px") + .style("z-index", 5); + + this.overlay_canvas = plot_area.append("canvas") + .attr("id", "plot-overlay-canvas") + .attr("width", this.width) + .attr("height", this.height) + .style("position", "absolute") + .style("top", (this.margin.top) + "px") + .style("left", (this.margin.left) + "px") + .style("z-index", 5); + + this.plot_group = plot_area.append("svg") + .attr("class", "plot-svg") + .style("z-index", 10); + + this.legend_group = group.append("div") + .attr("class", "plot-legend-group"); + + this.y_axis = d3.svg.axis() + .scale(this.dimension_y.scale()) + .orient("left"); + + this.dimension_y.format(this.y_axis, this.width); + + this.x_axis = d3.svg.axis() + .scale(this.dimension_x.scale()) + .orient("bottom"); + + this.dimension_x.format(this.x_axis, this.height); + + this.plot_group.append("g") + .attr("class", "y axis pale") + .attr("transform", "translate(" + this.margin.left + "," + this.margin.top + ")") + .call(this.y_axis); + + this.plot_group.append("g") + .attr("class", "x axis pale") + .attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")") + .call(this.x_axis); + + + this.x = this.dimension_x; + this.y = this.dimension_y; + + this.legend = CanvasPlotLegend(); + this.legend_list = []; + + this.line_renderer = CanvasPlotLine().x(this.x).y(this.y); + this.area_renderer = CanvasPlotArea().x(this.x).y(this.y); + this.error_bar_renderer = CanvasErrorBar().x(this.x).y(this.y); + this.stippled_line_renderer = CanvasPlotStippledLine().x(this.x).y(this.y); +} + +BasePlot.prototype.resize = function(width, height) { + //Some magic margins... + width = width - 80; + height = height - 70; + + this.width = width - this.margin.left - this.margin.right; + this.height = height - this.margin.top - this.margin.bottom; + + this.dimension_x.format(this.x_axis, this.height); + this.dimension_y.format(this.y_axis, this.width); + + this.dimension_x.setRange(0, this.width); + this.dimension_y.setRange(this.height, 0); + + this.plot_group.style("width", width + "px").style("height", height + "px"); + + this.canvas.attr("width", this.width).attr("height", this.height); + this.overlay_canvas.attr("width", this.width).attr("height", this.height); + + this.plot_group.select(".x.axis").attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")"); +}; + +BasePlot.prototype.setScales = function(x_min, x_max, y_min, y_max) { + + if(this.custom_y_min != y_min || this.custom_y_max != y_max || + this.custom_x_min != x_min || this.custom_x_max != x_max) { + this.custom_y_min = y_min; + this.custom_y_max = y_max; + this.custom_x_min = x_min; + this.custom_x_max = x_max; + } +}; + +BasePlot.prototype.setYDomain = function(min_y, max_y, ordinals) { + if (arguments.length == 3 && this.dimension_y.isOrdinal()) { + this.dimension_y.setDomain(ordinals); + } else { + var min = min_y; + var max = max_y; + + if (this.custom_y_min != null) { + min = this.custom_y_min; + } + + if (this.custom_y_max != null) { + max = this.custom_y_max; + } + + this.dimension_y.setDomain(min, max); + } +}; + +BasePlot.prototype.setXDomain = function(min_x, max_x, ordinals) { + if (arguments.length == 3 && this.dimension_x.isOrdinal()) { + this.dimension_x.setDomain(ordinals); + } else { + var min = min_x; + var max = max_x; + if (this.custom_x_min != null) { + min = this.custom_x_min; + } + + if (this.custom_x_max != null) { + max = this.custom_x_max; + } + + this.dimension_x.setDomain(min, max); + } +}; + +BasePlot.prototype.setData = function(data) { + this.stored_data = data; +}; + +BasePlot.prototype.getTitle = function(){ + if(this.stored_data != null && "name" in this.stored_data){ + return this.stored_data.name(); + } else { + return "No data"; + } +}; + +BasePlot.prototype.render = function() { + if(this.stored_data == null) { + return; + } + + var data = this.stored_data; + this.render_finished = false; + this.render_callback_finished = false; + + this.title.text(this.getTitle()); + + if (this.dimension_x.getUnit() == "") { + this.x_label.text(""); + } else { + this.x_label.text("X: " + this.dimension_x.getUnit()); + } + + if (this.dimension_y.getUnit() == "") { + this.y_label.text(""); + } else { + this.y_label.text("Y: " + this.dimension_y.getUnit()); + } + + if(data.hasBoundaries()) { + this.setYDomain(data.minY(), data.maxY()); + this.setXDomain(data.minX(), data.maxX()); + } + + if(this.pre_render_callback != null) { + this.pre_render_callback(data); + } + + this.resetLegends(); + + var axis = this.plot_group.select(".y.axis").call(this.y_axis); + this.dimension_y.relabel(axis); + + axis = this.plot_group.select(".x.axis").call(this.x_axis); + this.dimension_x.relabel(axis); + + this.canvas.attr("width", this.width).attr("height", this.height); + this.overlay_canvas.attr("width", this.width).attr("height", this.height); + + var context = this.canvas.node().getContext("2d"); + context.save(); + context.clearRect(0, 0, this.width, this.height); + + var overlay_context = this.overlay_canvas.node().getContext("2d"); + overlay_context.save(); + overlay_context.clearRect(0, 0, this.width, this.height); + + this.render_callback(context, data); + + if(this.render_observations) { + this.renderObservations(overlay_context, data); + } + + if(this.render_refcase) { + this.renderRefcase(overlay_context, data); + } + + overlay_context.restore(); + context.restore(); + this.finishedRendering(); + +}; + +BasePlot.prototype.setRenderCallback = function(callback) { + this.render_callback = callback; +}; + +BasePlot.prototype.setPreRenderCallback = function(callback) { + this.pre_render_callback = callback; +}; + + +BasePlot.prototype.resetLegends = function() { + this.legend_list = []; +}; + +BasePlot.prototype.addLegend = function(style, name, render_function) { + this.legend_list.push({"style": style, "name": name,"render_function": render_function}); +}; + + +BasePlot.prototype.renderObservations = function(context, data) { + if(data.hasObservationData()) { + var obs_data = data.observationData(); + if(obs_data.isContinuous() && !this.error_bar_only) { + var x_values = obs_data.xValues(); + var y_values = obs_data.yValues(); + var std_values = obs_data.stdValues(); + + var obs_x_area_samples = []; + var obs_y_area_samples = []; + + for (var index = 0; index < x_values.length; index++) { + obs_x_area_samples.push(x_values[index]); + obs_y_area_samples.push(y_values[index] + std_values[index]); + } + + for (var index = x_values.length - 1; index >= 0; index--) { + obs_x_area_samples.push(x_values[index]); + obs_y_area_samples.push(y_values[index] - std_values[index]); + } + + this.area_renderer.style(STYLES["observation_area"]); + this.area_renderer(context, obs_x_area_samples, obs_y_area_samples); + + this.stippled_line_renderer.style(STYLES["observation"]); + this.stippled_line_renderer(context, x_values, y_values); + + this.addLegend(STYLES["observation"], "Observation", CanvasPlotLegend.stippledLine); + this.addLegend(STYLES["observation_area"], "Observation error", CanvasPlotLegend.filledCircle); + + } else { + + var obs_x_samples = obs_data.xValues(); + var obs_y_samples = obs_data.yValues(); + var obs_std_samples = obs_data.stdValues(); + + for (var index = 0; index < obs_x_samples.length; index++) { + var x = obs_x_samples[index]; + var y = obs_y_samples[index]; + var error = obs_std_samples[index]; + + this.error_bar_renderer.style(STYLES["observation_error_bar"]); + this.error_bar_renderer(context, x, y, error, this.vertical_error_bar); + } + this.addLegend(STYLES["observation_error_bar"], "Observation error bar", CanvasPlotLegend.errorBar); + } + } +}; + + +BasePlot.prototype.renderRefcase = function(context, data) { + if(data.hasRefcaseData()) { + var refcase_data = data.refcaseData(); + var style = STYLES["refcase"]; + + this.line_renderer.style(style); + this.line_renderer(context, refcase_data.xValues(), refcase_data.yValues()); + + this.addLegend(style, "Refcase", CanvasPlotLegend.simpleLine); + } +}; + +BasePlot.prototype.createLineRenderer = function() { + return CanvasPlotLine().x(this.x).y(this.y); +}; + +BasePlot.prototype.createCircleRenderer = function() { + return CanvasCircle().x(this.x).y(this.y); +}; + +BasePlot.prototype.createCrossRenderer = function() { + return CanvasCross().x(this.x).y(this.y); +}; + +BasePlot.prototype.createStippledLineRenderer = function() { + return CanvasPlotStippledLine().x(this.x).y(this.y); +}; + +BasePlot.prototype.createAreaRenderer = function() { + return CanvasPlotArea().x(this.x).y(this.y); +}; + + +BasePlot.prototype.setVerticalErrorBar = function(vertical){ + this.vertical_error_bar = vertical; + +}; + +BasePlot.prototype.setCustomSettings = function (settings) { + if ("error_bar_only" in settings) { + this.error_bar_only = settings["error_bar_only"]; + } + + if ("show_observations" in settings) { + this.setRenderObservations(settings["show_observations"]); + } + + if ("show_refcase" in settings) { + this.setRenderRefcase(settings["show_refcase"]); + } +}; + +BasePlot.prototype.renderCallbackFinishedRendering = function(){ + this.render_callback_finished = true; + this.emitFinishedRendering() +}; + +BasePlot.prototype.finishedRendering = function(){ + this.render_finished = true; + this.emitFinishedRendering(); +}; + +BasePlot.prototype.emitFinishedRendering = function(){ + if(this.rendering_finished_callback != null){ + if(this.render_finished && this.render_callback_finished) { + this.legend_group.selectAll(".plot-legend").data(this.legend_list).call(this.legend); + this.rendering_finished_callback(); + } + } +}; + +BasePlot.prototype.setRenderingFinishedCallback = function(callback) { + this.rendering_finished_callback = callback; +}; + +BasePlot.prototype.setLogScaleOnDimensionX = function(use_log_scale) { + this.dimension_x.setIsLogScale(use_log_scale); + this.x_axis.scale(this.dimension_x.scale()); + this.dimension_x.format(this.x_axis, this.height); +}; + +BasePlot.prototype.setLogScaleOnDimensionY = function(use_log_scale) { + this.dimension_y.setIsLogScale(use_log_scale); + this.y_axis.scale(this.dimension_y.scale()); + this.dimension_y.format(this.y_axis, this.width); +}; + +BasePlot.prototype.setRenderObservations = function(enabled) { + this.render_observations = enabled; +}; + +BasePlot.prototype.setRenderRefcase = function(enabled) { + this.render_refcase = enabled; +}; + +function isNumber(n) { + return !isNaN(parseFloat(n)) && isFinite(n); +} diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_integer_dimension.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_integer_dimension.js new file mode 100644 index 0000000000..d0f62f3bba --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_integer_dimension.js @@ -0,0 +1,74 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'base_plot_time_dimension.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function BasePlotIntegerDimension(){ + var scale = d3.time.scale().range([0, 1]).domain([1, 0]); + var unit = ""; + + var scaler = function(d) { + return scale(d); + }; + + var count_format = d3.format("d"); + + function dimension(value) { + return scaler(value); + } + + dimension.setDomain = function(min, max) { + if(min == max) { + min = Math.floor(min - 0.1 * min); + max = Math.ceil(max + 0.1 * max); + } + + scale.domain([min, max]); + + }; + + dimension.setRange = function(min, max) { + scale.range([min, max]); + }; + + dimension.scale = function() { + return scale; + }; + + dimension.isOrdinal = function() { + return false; + }; + + dimension.format = function(axis, max_length){ + axis.ticks(5) + .tickSize(-max_length, -max_length) + .tickFormat(count_format); + + return dimension; + }; + + dimension.relabel = function (axis) { + + }; + + dimension.setUnit = function(unit_in) { + unit = unit_in; + }; + + dimension.getUnit = function() { + return unit; + }; + + return dimension; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_ordinal_dimension.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_ordinal_dimension.js new file mode 100644 index 0000000000..d46197f0f2 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_ordinal_dimension.js @@ -0,0 +1,74 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'base_plot_ordinal_dimension.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function BasePlotOrdinalDimension(point_style){ + var scale = null; + var unit = ""; + + if(point_style) { + scale = d3.scale.ordinal().rangePoints([0, 1], 1).domain(["unknown"]); + } else { + scale = d3.scale.ordinal().rangeRoundBands([0, 1], .5).domain(["unknown"]); + } + + var scaler = function(d) { + return scale(d); + }; + + function dimension(value) { + return scaler(value); + } + + dimension.setDomain = function(values) { + scale.domain(values); + }; + + dimension.setRange = function(min, max) { + if(point_style) { + scale.rangePoints([min, max], 1); + } else { + scale.rangeRoundBands([min, max], .5); + } + }; + + dimension.scale = function() { + return scale; + }; + + dimension.format = function(axis, max_length){ + axis.tickSize(-max_length, -max_length); + + return dimension; + }; + + dimension.isOrdinal = function() { + return true; + }; + + dimension.relabel = function (axis) { + + }; + + dimension.setUnit = function(unit_in) { + unit = unit_in; + }; + + dimension.getUnit = function() { + return unit; + }; + + return dimension; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_time_dimension.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_time_dimension.js new file mode 100644 index 0000000000..d69c7b6663 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_time_dimension.js @@ -0,0 +1,81 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'base_plot_time_dimension.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function BasePlotTimeDimension(){ +// var scale = d3.scale.linear().range([1, 0]).domain([0, 1]).nice(); + var scale = d3.time.scale().range([0, 1]).domain([1, 0]); + var time_scale = d3.time.scale().range([0, 1]).domain([1, 0]); + + var unit = "Date"; + + var scaler = function(d) { + return scale(d); + }; + + var customTimeFormat = d3.time.format.multi([ + [".%L", function(d) { return d.getMilliseconds(); }], + [":%S", function(d) { return d.getSeconds(); }], + ["%I:%M", function(d) { return d.getMinutes(); }], + ["%I %p", function(d) { return d.getHours(); }], + ["%a %d", function(d) { return d.getDay() && d.getDate() != 1; }], + ["%b %d", function(d) { return d.getDate() != 1; }], + ["%b", function(d) { return d.getMonth(); }], + ["%Y", function() { return true; }] + ]); + + function dimension(value) { + return scaler(value); + } + + dimension.setDomain = function(min, max) { + time_scale.domain([new Date(min * 1000), new Date(max * 1000)]).nice(); + var domain = time_scale.domain(); + scale.domain([domain[0].getTime() / 1000, domain[1].getTime() / 1000]); + }; + + dimension.setRange = function(min, max) { + scale.range([min, max]); + time_scale.range([min, max]); + }; + + dimension.scale = function() { + return time_scale; + }; + + dimension.isOrdinal = function() { + return false; + }; + + dimension.format = function(axis, max_length){ + axis.tickFormat(customTimeFormat); + + return dimension; + }; + + dimension.relabel = function (axis) { + + }; + + dimension.setUnit = function(unit_in) { + unit = unit_in; + }; + + dimension.getUnit = function() { + return unit; + }; + + return dimension; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_value_dimension.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_value_dimension.js new file mode 100644 index 0000000000..2ff866d8b7 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/base_plot_value_dimension.js @@ -0,0 +1,157 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'base_plot_value_dimension.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function BasePlotValueDimension(flip_range) { + if (!arguments.length) { + var flip_range = false; + } + + var is_log_scale = false; + var tick_count = 10; + var ticks = null; + var unit = ""; + + var scale = d3.scale.linear().range([1, 0]).domain([0, 1]).nice(); + var log_scale = d3.scale.log().range([1, 0]).domain([0, 1]).nice(); + + var value_format = d3.format(".4g"); +// var value_log_format = d3.format("e"); +// +// var value_log_format_function = function (d) { +// var x = Math.log(d) / Math.log(10) + 1e-6; +// return Math.abs(x - Math.floor(x)) < 0.3 ? value_log_format(d) : ""; +// }; + + var scaler = function (d) { + if (is_log_scale) { + return log_scale(d); + } else { + return scale(d); + } + }; + + function dimension(value) { + return scaler(value); + } + + function powerOfTen(d) { + return d / Math.pow(10, Math.ceil(Math.log(d) / Math.LN10 - 1e-12)) === 1; + } + + dimension.setDomain = function (min, max) { + if (min == max) { + min = min - 0.1 * min; + max = max + 0.1 * max; + } + + if (flip_range) { + var tmp = min; + min = max; + max = tmp; + } + scale.domain([min, max]).nice(); + + + if(min <= 0.0) { + min = 0.000000001; + } + + if(max <= 0.0) { + max = 0.000000016; + } + + var from_log = Math.floor(Math.log(min) / Math.log(10)); + var to_log = Math.ceil(Math.log(max) / Math.log(10)); + var from = Math.pow(10, from_log); + var to = Math.pow(10, to_log); + log_scale.domain([from, to]); + }; + + dimension.setRange = function (min, max) { + scale.range([min, max]).nice(); + log_scale.range([min, max]).nice(); + }; + + dimension.scale = function () { + if (is_log_scale) { + return log_scale; + } else { + return scale; + } + }; + + dimension.isOrdinal = function () { + return false; + }; + + dimension.format = function (axis, max_length) { + + if (is_log_scale) { + axis.tickValues(null) + .tickPadding(10) + .ticks(1) + .tickSize(-max_length, -max_length); +// .tickFormat(value_log_format_function); + } else { + axis.tickPadding(10) + .tickSize(-max_length, -max_length) + .tickFormat(value_format) + .ticks(tick_count) + .tickValues(ticks); + } + + return dimension; + }; + + dimension.setIsLogScale = function (use_log_scale) { + is_log_scale = use_log_scale; + }; + + dimension.isLogScale = function () { + return is_log_scale; + }; + + dimension.relabel = function (axis) { + if (is_log_scale) { + axis.selectAll(".tick text") + .text(null) + .filter(powerOfTen) + .text(function (d) { + return "1.0×10"; + }) + .append("tspan") + .style("font-size", "70%") + .attr("dy", "-.7em") + .text(function (d) { + return Math.round(Math.log(d) / Math.LN10); + }); + } + }; + + dimension.setTicks = function(tick_list) { + ticks = tick_list; + }; + + dimension.setUnit = function(unit_in) { + unit = unit_in; + }; + + dimension.getUnit = function() { + return unit; + }; + + return dimension; +} diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_error_bar.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_error_bar.js new file mode 100644 index 0000000000..2081f2c155 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_error_bar.js @@ -0,0 +1,92 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_error_bar.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + + +function CanvasErrorBar() { + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + var radius = 2.5; + + function render(context, x, y, error, vertical) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + + x = X(x); + y = Y(y); + + context.beginPath(); + context.arc(x, y, radius, 0, 2 * Math.PI); + context.stroke(); + + + context.beginPath(); + if(vertical){ + error = Y(y + error) - Y(y); + + context.moveTo(x, y - radius); + context.lineTo(x, y - radius + error); + + context.moveTo(x - radius, y - radius + error); + context.lineTo(x + radius, y - radius + error); + + context.moveTo(x, y + radius); + context.lineTo(x, y + radius - error); + + context.moveTo(x - radius, y + radius - error); + context.lineTo(x + radius, y + radius - error); + + } else { + error = X(x + error) - X(x); + + context.moveTo(x - radius, y); + context.lineTo(x - radius + error, y); + + context.moveTo(x - radius + error, y - radius); + context.lineTo(x - radius + error, y + radius); + + context.moveTo(x + radius, y); + context.lineTo(x + radius - error, y); + + context.moveTo(x + radius - error, y - radius); + context.lineTo(x + radius - error, y + radius); + } + + context.stroke(); + + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot.js new file mode 100644 index 0000000000..ac70f58b21 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot.js @@ -0,0 +1,218 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function Plot(element, x_dimension, y_dimension) { + this.plot = new BasePlot(element, x_dimension, y_dimension); + + this.horizontal_draw_direction = true; + this.waiting_for_render_restart = false; + + + this.line_renderers = []; + for (var index = 1; index <= 5; index++) { + var renderer = this.plot.createLineRenderer(); + renderer.style(STYLES["ensemble_" + (index)]); + this.line_renderers.push(renderer) + } + + this.circle_renderers = []; + for (var index = 1; index <= 5; index++) { + var renderer = this.plot.createCircleRenderer(); + renderer.style(STYLES["ensemble_" + (index)]); + this.circle_renderers.push(renderer) + } + + this.tracker = new IncrementalRenderTracker(); + + var self = this; + + var progressivePreRenderer = function (context, data) { + var case_list = data.caseList(); + + for (var case_index = 0; case_index < case_list.length; case_index++) { + var style = STYLES["ensemble_" + (case_index + 1)]; + var case_name = case_list[case_index]; + + self.plot.addLegend(style, case_name, CanvasPlotLegend.simpleLine); + } + + self.progressiveRenderer(context, data, self, 0, 0); + }; + + var renderEnsembleProgressively = function (context, data) { + if (data.hasEnsembleData()) { + self.tracker.start(function () { + progressivePreRenderer(context, data); + }); + } + }; + + this.progressiveRenderer = function (context, data, self, case_index, realization) { + if (self.tracker.shouldStop()) { + self.tracker.stoppedRendering(); + return; + } + + var case_list = data.caseList(); + var case_name = case_list[case_index]; + var line_renderer = self.line_renderers[case_index]; + var circle_renderer = self.circle_renderers[case_index]; + + var ensemble_data = data.ensembleData(case_name); + var x_values = ensemble_data.xValues(); + var y_values = ensemble_data.yValues(); + + var realization_count = y_values.length; + if (!self.horizontal_draw_direction) { + realization_count = x_values.length; + } + + self.tracker.loopStart(); + for (var i = realization; i < realization_count; i++) { + if (self.horizontal_draw_direction) { + if(x_values.length == 1) { + circle_renderer(context, x_values[0], y_values[i][0]) + } else { + line_renderer(context, x_values, y_values[i]); + } + + } else { + if(y_values.length == 1) { + circle_renderer(context, x_values[i][0], y_values[0]) + } else { + line_renderer(context, x_values[i], y_values); + } + } + + realization++; + + if (self.tracker.shouldLoopStop()) { + break; + } + } + + if (realization == realization_count) { + case_index++; + realization = 0; + } + + if (case_index < case_list.length) { + window.setTimeout(function () { + self.progressiveRenderer(context, data, self, case_index, realization); + }, 15); + } else { + self.tracker.stoppedRendering(); + self.plot.renderCallbackFinishedRendering(); + } + }; + + + var renderEnsembleDirect = function(context, data) { + if(data.hasEnsembleData()) { + var case_list = data.caseList(); + + for(var case_index = 0; case_index < case_list.length; case_index++) { + var style = STYLES["ensemble_" + (case_index + 1)]; + var case_name = case_list[case_index]; + var line_renderer = self.line_renderers[case_index]; + var circle_renderer = self.circle_renderers[case_index]; + + var ensemble_data = data.ensembleData(case_name); + var x_values = ensemble_data.xValues(); + var y_values = ensemble_data.yValues(); + + var realization_count = y_values.length; + if (!self.horizontal_draw_direction) { + realization_count = x_values.length; + } + + + for (var i = 0; i < realization_count; i++) { + if (self.horizontal_draw_direction) { + if(x_values.length == 1) { + circle_renderer(context, x_values[0], y_values[i][0]) + } else { + line_renderer(context, x_values, y_values[i]); + } + + } else { + if(y_values.length == 1) { + circle_renderer(context, x_values[i][0], y_values[0]) + } else { + line_renderer(context, x_values[i], y_values); + } + } + + } + + self.plot.addLegend(style, case_name, CanvasPlotLegend.simpleLine); + } + self.plot.renderCallbackFinishedRendering(); + } + }; + + this.plot.setRenderCallback(renderEnsembleProgressively); + //this.plot.setRenderCallback(renderEnsembleDirect); +} + +Plot.prototype.resize = function (width, height) { + this.plot.resize(width, height); +}; + +Plot.prototype.setScales = function (x_min, x_max, y_min, y_max) { + this.plot.setScales(x_min, x_max, y_min, y_max); +}; + +Plot.prototype.setData = function (data) { + this.plot.setData(data); +}; + +Plot.prototype.setVerticalErrorBar = function (vertical) { + this.plot.setVerticalErrorBar(vertical); +}; + +Plot.prototype.setHorizontalDrawDirection = function (horizontal) { + this.horizontal_draw_direction = horizontal; +}; + +Plot.prototype.setCustomSettings = function (settings) { + this.plot.setCustomSettings(settings); +}; + +Plot.prototype.setRenderingFinishedCallback = function(callback) { + this.plot.setRenderingFinishedCallback(callback); +}; + +Plot.prototype.renderNow = function(){ + if(!this.tracker.isRunning()) { + this.waiting_for_render_restart = false; + this.plot.render(); + } else { + if(!this.waiting_for_render_restart) { + this.tracker.forceStop(); + this.waiting_for_render_restart = true; + + window.setTimeout(function () { + self.renderNow(); + }, 15); + } + } +}; + +Plot.prototype.getTitle = function(){ + return this.plot.getTitle(); +}; diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_area.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_area.js new file mode 100644 index 0000000000..55ca1b417c --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_area.js @@ -0,0 +1,77 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_area.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function CanvasPlotArea() { + var x = function(d) { return d;}; + var y = function(d) { return d;}; + var style = STYLES["default"]; + + function render(context, x_samples, y_samples) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.fillStyle = style["fill"]; + + context.beginPath(); + for(var index in x_samples) { + var x_sample = x_samples[index]; + var y_sample = y_samples[index]; + if(index == 0) { + context.moveTo(x(x_sample), y(y_sample)); + } else { + context.lineTo(x(x_sample), y(y_sample)); + } + } + context.closePath(); + context.stroke(); + context.fill(); + } + + render.x = function(value) { + if (!arguments.length) return x; + x = value; + return render; + }; + + render.y = function(value) { + if (!arguments.length) return y; + y = value; + return render; + }; + + render.style = function(value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + return render; +} + +//append list_2 reversed to list_1 as a new list +CanvasPlotArea.mergePoints = function(list_1, list_2) { + var result = []; + + for (var j = 0; j < list_1.length; j++) { + result.push(list_1[j]); + } + + for (var k = list_2.length - 1; k >= 0; k--) { + result.push(list_2[k]); + } + + return result; +}; \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_circle.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_circle.js new file mode 100644 index 0000000000..48e1ef1081 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_circle.js @@ -0,0 +1,72 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_circle.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + + +function CanvasCircle() { + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + var radius = 2.5; + var fill = false; + + function render(context, x, y) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.fillStyle = style["fill"]; + + context.beginPath(); + context.arc(X(x), Y(y), radius, 0, 2 * Math.PI); + + if(fill) { + context.fill(); + } + + context.stroke(); + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + render.fillCircle = function(fill_circle) { + if (!arguments.length) return fill; + fill = fill_circle; + return render; + }; + + render.radius = function(value) { + if (!arguments.length) return radius; + radius = value; + return render; + }; + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_cross.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_cross.js new file mode 100644 index 0000000000..1f66513ea5 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_cross.js @@ -0,0 +1,68 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_circle.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + + +function CanvasCross() { + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + var radius = 2.5; + var fill = false; + + function render(context, x, y) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.fillStyle = style["fill"]; + + var cx = X(x); + var cy = Y(y); + context.beginPath(); + context.moveTo(cx - radius, cy - radius); + context.lineTo(cx + radius, cy + radius); + + context.moveTo(cx + radius, cy - radius); + context.lineTo(cx - radius, cy + radius); + + context.stroke(); + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + render.radius = function(value) { + if (!arguments.length) return radius; + radius = value; + return render; + }; + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_distribution.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_distribution.js new file mode 100644 index 0000000000..8ea0167fcc --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_distribution.js @@ -0,0 +1,106 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'canvas_plot_distribution.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function DistributionPlot(element, x_dimension, y_dimension) { + this.plot = new BasePlot(element, x_dimension, y_dimension); + this.horizontal_draw_direction = true; + + var self = this; + + var preRenderCallback = function(data) { + if (data.hasEnsembleData()) { + if (!self.horizontal_draw_direction) { + self.plot.setLogScaleOnDimensionX(data.shouldUseLogScale()); + } else { + self.plot.setLogScaleOnDimensionY(data.shouldUseLogScale()); + } + + self.plot.setXDomain(data.minX(), data.maxX(), data.caseList()); + self.plot.setYDomain(data.minY(), data.maxY(), data.caseList()); + } + }; + + var renderCallback = function (context, data) { + if (data.hasEnsembleData()) { + var case_list = data.caseList(); + + for (var i = 0; i < case_list.length; i++) { + var style = STYLES[("ensemble_" + (i + 1))]; + var case_name = case_list[i]; + var ensemble_data = data.ensembleData(case_name); + + + var values; + if (!self.horizontal_draw_direction) { + values = ensemble_data.xValues(); + } else { + values = ensemble_data.yValues(); + } + + var circle_renderer = self.plot.createCircleRenderer(); + circle_renderer.style(style); + circle_renderer.fillCircle(true); + circle_renderer.radius(5); + + for(var j = 0; j < values.length; j++) { + var value = values[j]; + if(isNumber(value)) { + if (self.horizontal_draw_direction) { + circle_renderer(context, case_name, value); + } else { + circle_renderer(context, value, case_name); + } + } + } + + self.plot.addLegend(style, case_name, CanvasPlotLegend.filledCircle); + } + self.plot.renderCallbackFinishedRendering(); + } + }; + + this.plot.setPreRenderCallback(preRenderCallback); + this.plot.setRenderCallback(renderCallback); +} + +DistributionPlot.prototype.resize = function (width, height) { + this.plot.resize(width, height); +}; + +DistributionPlot.prototype.setScales = function (x_min, x_max, y_min, y_max) { + this.plot.setScales(x_min, x_max, y_min, y_max); +}; + +DistributionPlot.prototype.setData = function (data) { + this.plot.setData(data); +}; + +DistributionPlot.prototype.setHorizontalDrawDirection = function (horizontal) { + this.horizontal_draw_direction = horizontal; +}; + +DistributionPlot.prototype.setCustomSettings = function (settings) { + this.plot.setCustomSettings(settings); +}; + +DistributionPlot.prototype.renderNow = function(){ + this.plot.render(); +}; + +DistributionPlot.prototype.getTitle = function(){ + return this.plot.getTitle(); +}; diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_legend.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_legend.js new file mode 100644 index 0000000000..458a68c5d5 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_legend.js @@ -0,0 +1,254 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_legend.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function CanvasPlotLegend() { + + var size = 12; + + function legend(selection) { + var groups = selection.enter() + .append("div") + .attr("class", "plot-legend"); + + groups.append("canvas") + .attr("width", size) + .attr("height", size) + .attr("class", "legend-marker") + .call(markerRenderer); + + selection.selectAll(".legend-marker") + .data(function(d) { return [d];}) + .transition() + .call(markerRenderer); + + groups.append("div") + .attr("class", "plot-legend-label") + .text(function(d) { + return d["name"]; + }); + + selection.selectAll(".plot-legend-label") + .data(function(d) { + return [d]; + }) + .transition() + .text(function(d) { + return d["name"]; + }); + + selection.exit() + .remove(); + } + + var markerRenderer = function(selection) { + selection.each(function(datum) { + var ctx = d3.select(this).node().getContext("2d"); + ctx.clearRect(0, 0, size, size); + var style = datum["style"]; + + ctx.save(); + if("render_function" in datum) { + ctx.transform(1, 0, 0, 1, 1, 1); + datum["render_function"](ctx, style, size - 2, size - 2); + } else { + ctx.fillStyle = style["fill"]; + ctx.fillRect(1, 1, size - 2, size - 2); + + ctx.strokeStyle = style["stroke"]; + ctx.lineWidth = style["stroke_width"]; + ctx.strokeRect(1, 1, size - 2, size - 2); + } + ctx.restore(); + }); + }; + + return legend; + +} + +CanvasPlotLegend.parseColor = function(input) { + var result = [255, 255, 255, 1]; + +// match = input.match(/^#([0-9a-f]{3})$/i); +// if(match) { +// match = match[1]; +// // in three-character format, each value is multiplied by 0x11 to give an +// // even scale from 0x00 to 0xff +// result[0] = parseInt(match.charAt(0), 16) * 0x11; +// result[1] = parseInt(match.charAt(1), 16) * 0x11; +// result[2] = parseInt(match.charAt(2), 16) * 0x11; +// return result; +// } +// +// console.log("2"); +// match = input.match(/^#([0-9a-f]{6})$/i); +// if(match) { +// match = match[1]; +// result[0] = parseInt(match.substr(0,2), 16); +// result[1] = parseInt(match.substr(2,4), 16); +// result[2] = parseInt(match.substr(4,6), 16); +// return result; +// } +// +// match = input.match(/^rgb\s*\(\s*(\d+)\s*,\s*(\d+)\s*,\s*(\d+)\s*\)$/i); +// if(match) { +// result[0] = match[1]; +// result[1] = match[2]; +// result[2] = match[3]; +// return result; +// } +// if(input === undefined) { +// console.log("UNDEFINED!"); +// return result; +// } + var match = input.match(/^rgba\s*\(\s*(\d+)\s*,\s*(\d+)\s*,\s*(\d+)\s*,\s*(\d+\.?\d*)\s*\)$/i); + if(match) { + result[0] = match[1]; + result[1] = match[2]; + result[2] = match[3]; + result[3] = parseFloat(match[4]); + return result; + } + + return result; +}; + +CanvasPlotLegend.asRgb = function(r, g, b) { + return "rgb(" + r + "," + g + "," + b + ")"; +}; + +CanvasPlotLegend.asRgba = function(r, g, b, a) { + return "rgba(" + r + "," + g + "," + b + "," + a + ")"; +}; + + +CanvasPlotLegend.componentToHex = function(c) { + var hex = c.toString(16); + return hex.length == 1 ? "0" + hex : hex; +}; + +CanvasPlotLegend.rgbToHex = function(r, g, b) { + return "#" + CanvasPlotLegend.componentToHex(r) + CanvasPlotLegend.componentToHex(g) + CanvasPlotLegend.componentToHex(b); +}; + +CanvasPlotLegend.circledLine = function(context, style, width, height) { + context.strokeStyle = style["stroke"]; + context.lineWidth = style["stroke_width"]; + context.fillStyle = style["fill"]; + context.beginPath(); + context.moveTo(0, height / 2); + context.lineTo(width, height / 2); + context.stroke(); + + context.beginPath(); + context.arc(width / 2, height / 2, 2.5, 0, 2 * Math.PI); + context.fill(); + context.stroke(); +}; + +CanvasPlotLegend.filledCircle = function(context, style, width, height) { + context.strokeStyle = style["stroke"]; + context.lineWidth = style["stroke_width"]; + context.fillStyle = style["fill"]; + + context.beginPath(); + context.arc(width / 2, height / 2, width / 2, 0, 2 * Math.PI); + context.fill(); + context.stroke(); +}; + +CanvasPlotLegend.cross = function(context, style, width, height) { + context.strokeStyle = style["stroke"]; + context.lineWidth = style["stroke_width"]; + context.fillStyle = style["fill"]; + + var cx = width / 2; + var cy = height / 2; + var radius = width / 2; + + context.beginPath(); + context.moveTo(cx - radius, cy - radius); + context.lineTo(cx + radius, cy + radius); + + context.moveTo(cx + radius, cy - radius); + context.lineTo(cx - radius, cy + radius); + context.stroke(); +}; + +CanvasPlotLegend.errorBar = function(context, style, width, height) { + context.strokeStyle = style["stroke"]; + context.lineWidth = 1; + context.fillStyle = style["fill"]; + var cx = width / 2; + var cy = height / 2; + var radius = 2; + context.beginPath(); + context.moveTo(cx, cy - radius); + context.lineTo(cx, 0); + context.moveTo(cx - radius, 0); + context.lineTo(cx + radius, 0); + + context.moveTo(cx, cy + radius); + context.lineTo(cx, height); + context.moveTo(cx - radius, height); + context.lineTo(cx + radius, height); + context.stroke(); + + context.beginPath(); + context.arc(cx, cy, radius, 0, 2 * Math.PI); + context.fill(); + context.stroke(); +}; + +CanvasPlotLegend.simpleLine = function(context, style, width, height) { + var color = style["stroke"]; + var rgba = CanvasPlotLegend.parseColor(color); + context.strokeStyle = CanvasPlotLegend.asRgba(rgba[0], rgba[1], rgba[2], 1.0); + context.lineWidth = style["stroke_width"] * 2; + + context.beginPath(); + context.moveTo(0, height / 2); + context.lineTo(width, height / 2); + context.stroke(); +}; + +CanvasPlotLegend.stippledLine = function(context, style, width, height) { + var line_renderer = CanvasPlotStippledLine(); + line_renderer.style(style); + line_renderer(context, [0, width], [height / 2, height / 2]); +}; + +CanvasPlotLegend.filledCircleWithLine = function(context, style, width, height) { + context.strokeStyle = style[0]["stroke"]; + context.lineWidth = style[0]["stroke_width"]; + context.fillStyle = style[0]["fill"]; + + context.beginPath(); + context.arc(width / 2, height / 2, (width - 1) / 2, 0, 2 * Math.PI); + context.fill(); + context.stroke(); + + + context.strokeStyle = style[1]["stroke"]; + context.lineWidth = style[1]["stroke_width"]; + context.fillStyle = style[1]["fill"]; + + context.beginPath(); + context.moveTo(0, height / 2); + context.lineTo(width, height / 2); + context.stroke(); +}; \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_line.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_line.js new file mode 100644 index 0000000000..6fca068fcd --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_line.js @@ -0,0 +1,65 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_line.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function CanvasPlotLine() { + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + + function render(context, x_samples, y_samples) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.lineCap = style["line_cap"]; + + var length = Math.min(x_samples.length, y_samples.length); + + context.beginPath(); + for (var index = 0; index < length; index++) { + var x_sample = x_samples[index]; + var y_sample = y_samples[index]; + var x = X(x_sample); + var y = Y(y_sample); + + if (index == 0) { + context.moveTo(x, y); + } else { + context.lineTo(x, y); + } + } + + context.stroke(); + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_overview.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_overview.js new file mode 100644 index 0000000000..dda9c48f3f --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_overview.js @@ -0,0 +1,99 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_overview.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function OverviewPlot(element, x_dimension, y_dimension) { + this.plot = new BasePlot(element, x_dimension, y_dimension); + + this.horizontal_draw_direction = true; + + var self = this; + + var renderEnsemble = function (context, data) { + if (data.hasEnsembleData()) { + var case_list = data.caseList(); + + for (var i = 0; i < case_list.length; i++) { + var style = STYLES[("ensemble_" + (i + 1))]; + var case_name = case_list[i]; + var ensemble_data = data.ensembleData(case_name); + + var values = ensemble_data.xValues(); + if (!self.horizontal_draw_direction) { + values = ensemble_data.yValues(); + } + + var y_min_values = ensemble_data.yMinValues(); + var y_max_values = ensemble_data.yMaxValues(); + + var x_area_values = CanvasPlotArea.mergePoints(values, values); + var y_area_values = CanvasPlotArea.mergePoints(y_min_values, y_max_values); + + + self.plot.area_renderer.style(style); + if (self.horizontal_draw_direction) { + self.plot.area_renderer(context, x_area_values, y_area_values); + } else { + self.plot.area_renderer(context, y_area_values, x_area_values); + } + + self.plot.addLegend(style, case_name, CanvasPlotLegend.filledCircle); + } + self.plot.renderCallbackFinishedRendering(); + } + }; + + + this.plot.setRenderCallback(renderEnsemble); +} + +OverviewPlot.prototype.resize = function (width, height) { + this.plot.resize(width, height); +}; + +OverviewPlot.prototype.setScales = function (x_min, x_max, y_min, y_max) { + this.plot.setScales(x_min, x_max, y_min, y_max); +}; + +OverviewPlot.prototype.setData = function (data) { + this.plot.setData(data); +}; + + +OverviewPlot.prototype.setVerticalErrorBar = function (vertical) { + this.plot.setVerticalErrorBar(vertical); +}; + +OverviewPlot.prototype.setHorizontalDrawDirection = function (horizontal) { + this.horizontal_draw_direction = horizontal; +}; + +OverviewPlot.prototype.setCustomSettings = function (settings) { + this.plot.setCustomSettings(settings); +}; + +OverviewPlot.prototype.setRenderingFinishedCallback = function(callback) { + this.plot.setRenderingFinishedCallback(callback); +}; + +OverviewPlot.prototype.renderNow = function(){ + this.plot.render(); +}; + +OverviewPlot.prototype.getTitle = function(){ + return this.plot.getTitle(); +}; + diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_pca.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_pca.js new file mode 100644 index 0000000000..3f8bae63a6 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_pca.js @@ -0,0 +1,154 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'canvas_plot_distribution.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function PcaPlot(element, x_dimension, y_dimension) { + this.plot = new BasePlot(element, x_dimension, y_dimension); + this.plot.setRenderObservations(false); + this.plot.setRenderRefcase(false); + + this.horizontal_draw_direction = true; + this.group_scale = d3.scale.ordinal(); + + var self = this; + + var preRenderCallback = function(data) { + if (data.hasEnsembleData()) { + if (!self.horizontal_draw_direction) { + self.plot.setLogScaleOnDimensionX(data.shouldUseLogScale()); + } else { + self.plot.setLogScaleOnDimensionY(data.shouldUseLogScale()); + } + + self.plot.setXDomain(data.minX(), data.maxX(), data.observationData().xValues()); + self.plot.setYDomain(data.minY(), data.maxY(), data.observationData().yValues()); + } + }; + + var renderCallback = function (context, data) { + if (data.hasEnsembleData()) { + var obs_data = data.observationData(); + var obs_x_values = obs_data.xValues(); + var obs_y_values = obs_data.yValues(); + + var case_list = data.caseList(); + + for (var i = 0; i < case_list.length; i++) { + var style = STYLES[("ensemble_" + (i + 1))]; + var case_name = case_list[i]; + + var ensemble_data = data.ensembleData(case_name); + + var x_values = ensemble_data.xValues(); + var y_values = ensemble_data.yValues(); + + var realization_count = y_values.length; + var pc_count = x_values.length; + if (!self.horizontal_draw_direction) { + realization_count = x_values.length; + pc_count = y_values.length; + } + + var circle_renderer = self.plot.createCircleRenderer(); + + var circle_scale = circle_renderer.x().scale(); + self.group_scale.domain(case_list).rangePoints([0, circle_scale.rangeBand()], 1); + + var scaler = function(value) { + var pc = value[0]; + var case_name = value[1]; + return circle_scale(pc) + self.group_scale(case_name); + }; + + circle_renderer.x(scaler); + + circle_renderer.style(style); + circle_renderer.fillCircle(true); + circle_renderer.radius(5); + + for (var j = 0; j < realization_count; j++) { + for(var pc = 0; pc < pc_count; pc++) { + if (self.horizontal_draw_direction) { + circle_renderer(context, [x_values[pc], case_name], y_values[j][pc]) + + } else { + circle_renderer(context, x_values[j][pc], [y_values[pc], case_name]) + } + } + } + + + var cross_renderer = self.plot.createCrossRenderer(); + + cross_renderer.x(scaler); + + cross_renderer.style(STYLES["observation"]); + cross_renderer.radius(5); + + + for(var pc = 0; pc < pc_count; pc++) { + if (self.horizontal_draw_direction) { + cross_renderer(context, [obs_x_values[pc], case_name], obs_y_values[pc]) + + } else { + cross_renderer(context, obs_x_values[pc], [obs_y_values[pc], case_name]) + } + } + + self.plot.addLegend(style, case_name, CanvasPlotLegend.filledCircle); + } + + self.plot.addLegend(STYLES["observation"], "Observation", CanvasPlotLegend.cross); + + self.plot.renderCallbackFinishedRendering(); + } + }; + + this.plot.setPreRenderCallback(preRenderCallback); + this.plot.setRenderCallback(renderCallback); +} + +PcaPlot.prototype.resize = function (width, height) { + this.plot.resize(width, height); +}; + +PcaPlot.prototype.setScales = function (x_min, x_max, y_min, y_max) { + this.plot.setScales(x_min, x_max, y_min, y_max); +}; + +PcaPlot.prototype.setData = function (data) { + this.plot.setData(data); +}; + +PcaPlot.prototype.setHorizontalDrawDirection = function (horizontal) { + this.horizontal_draw_direction = horizontal; +}; + +PcaPlot.prototype.setCustomSettings = function (settings) { + this.plot.setCustomSettings(settings); +}; + +PcaPlot.prototype.renderNow = function(){ + this.plot.render(); +}; + +PcaPlot.prototype.getTitle = function(){ + return this.plot.getTitle(); +}; + +PcaPlot.prototype.setRenderingFinishedCallback = function(callback) { + this.plot.setRenderingFinishedCallback(callback); +}; diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_rect.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_rect.js new file mode 100644 index 0000000000..9bbb9fef42 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_rect.js @@ -0,0 +1,64 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_rect.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + + +function CanvasRect() { + var margin = {top: 0, right: 0, bottom: 0, left: 0}; + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + + function render(context, x1, y1, x2, y2) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.fillStyle = style["fill"]; + + var x = X(x1); + var y = Y(y1); + var w = X(x2) - x; + var h = Y(y2) - y; + context.fillRect(x + margin.left, y + margin.top, w - margin.left - margin.right, h - margin.top - margin.bottom); + context.strokeRect(x + margin.left, y + margin.top, w - margin.left - margin.right, h - margin.top - margin.bottom); + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + render.margin = function (top, right, bottom, left) { + if (!arguments.length) return margin; + margin = {top: top, right: right, bottom: bottom, left: left}; + return render; + }; + + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_statistics.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_statistics.js new file mode 100644 index 0000000000..9511ccfc1b --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_statistics.js @@ -0,0 +1,148 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'canvas_plot_overview.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function StatisticsPlot(element, x_dimension, y_dimension) { + this.plot = new BasePlot(element, x_dimension, y_dimension); + + var horizontal_draw_direction = true; + + var line_renderer = this.plot.createLineRenderer(); + var stippled_line_renderer = this.plot.createStippledLineRenderer(); + var area_renderer = this.plot.createAreaRenderer(); + var dark_area_renderer = this.plot.createAreaRenderer(); + + + var self = this; + + var renderEnsemble = function (context, data) { + if (data.hasEnsembleData()) { + var case_list = data.caseList(); + + for (var i = 0; i < case_list.length; i++) { + var style = STYLES[("ensemble_" + (i + 1))]; + var case_name = case_list[i]; + var ensemble_data = data.ensembleData(case_name); + + var values = ensemble_data.xValues(); + if (!horizontal_draw_direction) { + values = ensemble_data.yValues(); + } + + var y_min_values = ensemble_data.yMinValues(); + var y_max_values = ensemble_data.yMaxValues(); + var median = ensemble_data.xPercentile(0.5); + var p10 = ensemble_data.xPercentile(0.1); + var p33 = ensemble_data.xPercentile(0.33); + var p67 = ensemble_data.xPercentile(0.67); + var p90 = ensemble_data.xPercentile(0.9); + + var area_values = CanvasPlotArea.mergePoints(values, values); + + var area_style = { + stroke: "rgba(255,255, 255, 0.0)", + fill: style["fill"], + stroke_width: 1 + }; + + var dark_area_style = { + stroke: "rgba(255,255, 255, 0.0)", + fill: STYLES.darker(style["fill"]), + stroke_width: 1 + }; + + var stipple_style = { + stroke: style["stroke"], + fill: "rgba(255, 255, 255, 0.0)", + stroke_width: style["stroke_width"], + line_cap: "butt" + }; + + line_renderer.style(style); + stippled_line_renderer.style(stipple_style); + stippled_line_renderer.stippleLength(5); + area_renderer.style(area_style); + dark_area_renderer.style(dark_area_style); + + if (horizontal_draw_direction) { + stippled_line_renderer(context, values, y_max_values); + stippled_line_renderer(context, values, y_min_values); + + area_renderer(context, area_values, CanvasPlotArea.mergePoints(p10, p90)); + dark_area_renderer(context, area_values, CanvasPlotArea.mergePoints(p33, p67)); + + stippled_line_renderer(context, values, median); + + } else { + stippled_line_renderer(context, y_max_values, values); + stippled_line_renderer(context, y_min_values, values); + + area_renderer(context, CanvasPlotArea.mergePoints(p10, p90), area_values); + dark_area_renderer(context, CanvasPlotArea.mergePoints(p33, p67), area_values); + + stippled_line_renderer(context, median, values); + } + + self.plot.addLegend(area_style, "P10 - P90", CanvasPlotLegend.filledCircle); + self.plot.addLegend(dark_area_style, "P33 - P67", CanvasPlotLegend.filledCircle); + self.plot.addLegend(stipple_style, "Min - Median - Max", CanvasPlotLegend.stippledLine); + self.plot.addLegend(style, case_name, CanvasPlotLegend.filledCircle); + } + self.plot.renderCallbackFinishedRendering(); + } + }; + + + this.plot.setRenderCallback(renderEnsemble); +} + +StatisticsPlot.prototype.resize = function (width, height) { + this.plot.resize(width, height); +}; + +StatisticsPlot.prototype.setScales = function (x_min, x_max, y_min, y_max) { + this.plot.setScales(x_min, x_max, y_min, y_max); +}; + +StatisticsPlot.prototype.setData = function (data) { + this.plot.setData(data); +}; + + +StatisticsPlot.prototype.setVerticalErrorBar = function (vertical) { + this.plot.setVerticalErrorBar(vertical); +}; + +StatisticsPlot.prototype.setHorizontalDrawDirection = function (horizontal) { + this.horizontal_draw_direction = horizontal; +}; + +StatisticsPlot.prototype.setCustomSettings = function (settings) { + this.plot.setCustomSettings(settings); +}; + +StatisticsPlot.prototype.setRenderingFinishedCallback = function(callback) { + this.plot.setRenderingFinishedCallback(callback); +}; + +StatisticsPlot.prototype.renderNow = function(){ + this.plot.render(); +}; + +StatisticsPlot.prototype.getTitle = function(){ + return this.plot.getTitle(); +}; + diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_stippled_line.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_stippled_line.js new file mode 100644 index 0000000000..c8e6d6ef39 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/canvas_plot_stippled_line.js @@ -0,0 +1,129 @@ +// Copyright (C) 2014 Statoil ASA, Norway. +// +// The file 'canvas_plot_stippled_line.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function CanvasPlotStippledLine() { + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + var stipple_length = 2; + + var dashing = true; + var unfinished_pixels_from_previous = 0; + + + function render(context, x_samples, y_samples) { + context.lineWidth = style["stroke_width"]; + context.strokeStyle = style["stroke"]; + context.lineCap = style["line_cap"]; + dashing = true; + unfinished_pixels_from_previous = 0; + + var length = Math.min(x_samples.length, y_samples.length); + + context.beginPath(); + var previous_x = 0; + var previous_y = 0; + for (var index = 0; index < length; index++) { + var x_sample = x_samples[index]; + var y_sample = y_samples[index]; + var x = X(x_sample); + var y = Y(y_sample); + + if (index > 0) { + render.dashedLineFromTo(context, previous_x, previous_y, x, y); + } + previous_x = x; + previous_y = y; + } + + context.stroke(); + } + + render.dashedLineFromTo = function(context, x1, y1, x2, y2) { + var x = x1; + var y = y1; + var dash_length = stipple_length; + var dx = (x2 - x) + 0.00000001; + var dy = (y2 - y); + var slope = dy / dx; + var distance_remaining = Math.sqrt(dx * dx + dy * dy); + var unfinished_pixels = false; + var current_dash_length; + var x_step; + + context.moveTo(x, y); + + while(distance_remaining >= 0.1) { + if(unfinished_pixels_from_previous === 0) { + current_dash_length = dash_length; + } else { + current_dash_length = unfinished_pixels_from_previous; + unfinished_pixels_from_previous = 0; + dashing = !dashing; + } + + if(dash_length > distance_remaining) { + dash_length = distance_remaining; + unfinished_pixels = true; + } + + x_step = Math.sqrt(current_dash_length * current_dash_length / (1 + slope * slope)); + x += x_step; + y += slope * x_step; + + if(dashing) { + context.lineTo(x, y); + } else { + context.moveTo(x, y); + } + distance_remaining -= current_dash_length; + dashing = !dashing; + } + + if(unfinished_pixels) { + unfinished_pixels_from_previous = current_dash_length; + } + + + }; + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + render.stippleLength = function (value) { + if (!arguments.length) return stipple_length; + stipple_length = value; + return render; + }; + + + return render; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram.js new file mode 100644 index 0000000000..6db4fbe9f5 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram.js @@ -0,0 +1,358 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'histogram.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function Histogram(element, x_dimension, y_dimension) { + var stored_data = null; + var stored_case_name = ""; + + var margin = {left: 40, right: 30, top: 20, bottom: 30}; + var width = 384 - margin.left - margin.right; + var height = 256 - margin.top - margin.bottom; + + var style = STYLES["default"]; + + var custom_value_min = null; + var custom_value_max = null; + + var x_dimension = x_dimension; + var y_dimension = y_dimension; + + + var histogram_renderer = HistogramRenderer().x(x_dimension).y(y_dimension).margin(0, 1, 0, 1); + var line_renderer = CanvasPlotLine().x(x_dimension).y(y_dimension); + var stipple_renderer = CanvasPlotStippledLine().x(x_dimension).y(y_dimension); + var area_renderer = CanvasPlotArea().x(x_dimension).y(y_dimension); + var circle_renderer = CanvasCircle().x(x_dimension).y(y_dimension); + + var legend = CanvasPlotLegend(); + var legend_list = []; + + + + var group = element.append("div") + .attr("class", "histogram"); + + + var title = group.append("div") + .attr("class", "plot-title") + .text("Histogram"); + + var axis_label_group = group.append("div") + .attr("id", "axis-label-group") + + var x_label = axis_label_group.append("div") + .attr("class", "x axis-label") + .text(""); + + var y_label = axis_label_group.append("div") + .attr("class", "y axis-label") + .text(""); + + var histogram_area = group.append("div").attr("class", "plot-area"); + + var legend_group = group.append("div") + .attr("class", "plot-legend-group"); + + var histogram_group = histogram_area.append("svg") + .attr("class", "plot-svg"); + + + var svg = histogram_group.append("g") + .attr("transform", "translate(" + margin.left + "," + margin.top + ")") + .style("width", width + "px") + .style("height", height + "px"); + + var canvas = histogram_area.append("canvas") + .attr("id", "histogram-canvas") + .attr("width", width) + .attr("height", height) + .style("position", "absolute") + .style("top", (margin.top) + "px") + .style("left", (margin.left) + "px") + .style("z-index", 5); + + + + + var y_axis = d3.svg.axis() + .scale(y_dimension.scale()) + .orient("left"); + + var x_axis = d3.svg.axis() + .scale(x_dimension.scale()) + .orient("bottom"); + + histogram_group.append("g") + .attr("class", "y axis pale") + .attr("transform", "translate(" + margin.left + "," + margin.top + ")") + .call(y_axis); + + histogram_group.append("g") + .attr("class", "x axis") + .attr("transform", "translate(" + margin.left + ", " + (height + margin.top) + ")") + .call(x_axis); + + var resetLegends = function() { + legend_list = []; + }; + + var addLegend = function(style, name, render_function) { + legend_list.push({"style": style, "name": name,"render_function": render_function}); + }; + + function formatDate(ctime) { + var date = new Date(ctime * 1000); + var year = date.getFullYear(); + var month = date.getMonth() + 1; + var day = date.getDate(); + + if (month < 10) { + month = "0" + month; + } + + if (day < 10) { + day = "0" + day; + } + + return year + "-" + month + "-" + day; + } + + + function createLogBinFunction (bin_count) { + function binner(range, values) { + var thresholds = []; + + var range_diff = range[1] - range[0]; + + var from_log = Math.round(Math.log(range[0]) / Math.log(10)); + var to_log = Math.round(Math.log(range[1]) / Math.log(10)); + + var from_to_diff = to_log - from_log; + var log_bin_count = from_to_diff; + var log_bin_count_next = from_to_diff * 2; + + while(log_bin_count_next < bin_count) { + log_bin_count = log_bin_count_next; + log_bin_count_next += from_to_diff; + } + + + + if(log_bin_count_next - bin_count < bin_count - log_bin_count) { + bin_count = log_bin_count_next; + } else { + bin_count = log_bin_count; + } + + var step = from_to_diff / bin_count ; + + var sum = 0; + for(var i = 0; i <= bin_count; i++) { + sum += Math.pow(10, i * step); + } + + var bin_size = range_diff / sum; + + thresholds.push(range[0]); + + for(var i = 1; i < bin_count; i++) { + var value = thresholds[i - 1] + (bin_size * Math.pow(10, i * step)); + thresholds.push(value); + } + + + thresholds.push(range[1]); + + return thresholds; + + } + return binner; + } + + + + + function histogram(data, case_name) { + if (!arguments.length) { + if(stored_data == null) { + return; + } + data = stored_data; + case_name = stored_case_name; + } else { + stored_data = data; + stored_case_name = case_name; + } + + x_axis.scale(x_dimension.scale()); + x_dimension.format(x_axis, height); + x_axis.tickSize(0, 0); + + y_axis.scale(y_dimension.scale()); + y_dimension.format(y_axis, width); + + + resetLegends(); + + title.text(histogram.getTitle()); + + if (x_dimension.getUnit() == "") { + x_label.text(""); + } else { + x_label.text("X: " + x_dimension.getUnit()); + } + + if (y_dimension.getUnit() == "") { + y_label.text(""); + } else { + y_label.text("Y: " + y_dimension.getUnit()); + } + + var context = canvas.node().getContext("2d"); + context.save(); + context.clearRect(0, 0, width, height); + + + if(data.hasObservation()) { + line_renderer.style(STYLES["observation"]); + var obs = data.observation(); + var top = data.maxCount() + 1; + stipple_renderer(context, [obs, obs], [0, top]); + addLegend(STYLES["observation"], "Observation", CanvasPlotLegend.stippledLine); + + var error = data.observationError(); + area_renderer.style(STYLES["observation_area"]); + area_renderer(context, [obs - error, obs + error, obs + error, obs - error], [top, top, 0, 0]); + + addLegend(STYLES["observation_area"], "Observation error", CanvasPlotLegend.filledCircle); + } + + if(data.hasRefcase()) { + line_renderer.style(STYLES["refcase"]); + line_renderer(context, [data.refcase(), data.refcase()], [0, data.maxCount() + 1]); + addLegend(STYLES["refcase"], "Refcase", CanvasPlotLegend.simpleLine); + } + + if(data.hasCaseHistogram(case_name)) { + + var case_histogram = data.caseHistogram(case_name); + var bin_count = data.numberOfBins(); + + var bins = histogram.histogramLayout(bin_count)(case_histogram.samples()); + +// var ticks = []; +// for(var i = 0; i < bins.length; i++) { +// ticks.push(bins[i].x); +// +// if(i == bins.length - 1) { +// ticks.push(bins[i].x + bins[i].dx); +// } +// } +// +// x_dimension.setTicks(ticks); + + histogram_renderer.style(style); + histogram_renderer(context, bins); + + addLegend(style, case_name, CanvasPlotLegend.filledCircle); + } + + legend_group.selectAll(".plot-legend").data(legend_list).call(legend); + histogram_group.select(".y.axis").call(y_axis); + var axis = histogram_group.select(".x.axis").call(x_axis); + x_dimension.relabel(axis); + + context.restore(); + } + + + histogram.histogramLayout = function(bin_count) { + var layout = null; + var use_log_scale = false; + + if("isLogScale" in x_dimension) { + use_log_scale = x_dimension.isLogScale(); + } + + if(use_log_scale) { + layout = d3.layout.histogram() + .range(x_dimension.scale().domain()) + .bins(createLogBinFunction(bin_count)); + } else { + layout = d3.layout.histogram() + .range(x_dimension.scale().domain()) + .bins(bin_count); + } + + return layout; + }; + + histogram.setSize = function(w, h) { + w = w - 80; + h = h - 70; + + width = w - margin.left - margin.right; + height = h - margin.top - margin.bottom; + + x_dimension.setRange(0, width); + y_dimension.setRange(height, 0); + + histogram_group.style("width", w + "px"); + histogram_group.style("height", h + "px"); + + canvas.attr("width", width).attr("height", height); + + svg.style("width", width + "px"); + svg.style("height", height + "px"); + + histogram_group.select(".x.axis") + .attr("transform", "translate(" + margin.left + ", " + (height + margin.top) + ")"); + + }; + + + histogram.style = function (value) { + if (!arguments.length) return style; + style = value; + return histogram; + }; + + histogram.setValueScales = function(min, max) { + custom_value_min = min; + custom_value_max = max; + }; + + histogram.setVisible = function(visible) { + if(!visible) { + group.style("display", "none"); + } else { + group.style("display", "inline-block"); + } + }; + + histogram.getTitle = function(){ + var data = stored_data; + var report_date = data.reportStepTime(); + if(report_date == 0){ + return data.name(); + } else { + return data.name() + " @ " + formatDate(data.reportStepTime()); + } + }; + + return histogram; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram_renderer.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram_renderer.js new file mode 100644 index 0000000000..1675c774f2 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/histogram_renderer.js @@ -0,0 +1,72 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'histogram_renderer.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + + +function HistogramRenderer() { + var margin = {top: 0, right: 0, bottom: 0, left: 0}; + var X = function (d) { return d; }; + var Y = function (d) { return d; }; + var style = STYLES["default"]; + + + function render(context, histogram_values) { + context.lineWidth = "1"; + context.strokeStyle = "rgba(0, 0, 0, 0.5)"; + + var fill = style["fill"]; + + context.fillStyle = STYLES.blendWithWhite(fill, 1.0); + + for(var j = 0; j < histogram_values.length; j++) { + var value = histogram_values[j]; + if(value.y > 0) { + var x = X(value.x); + var y = Y(value.y); + var w = X(value.x + value.dx) - x; + var h = Y(0) - y; + + context.fillRect(x + margin.left, y + margin.top, w - margin.left - margin.right, h - margin.top - margin.bottom); + context.strokeRect(x + margin.left, y + margin.top, w - margin.left - margin.right, h - margin.top - margin.bottom); + } + } + } + + render.x = function (value) { + if (!arguments.length) return X; + X = value; + return render; + }; + + render.y = function (value) { + if (!arguments.length) return Y; + Y = value; + return render; + }; + + render.style = function (value) { + if (!arguments.length) return style; + style = value; + return render; + }; + + render.margin = function (top, right, bottom, left) { + if (!arguments.length) return margin; + margin = {top: top, right: right, bottom: bottom, left: left}; + return render; + }; + + return render; +} diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/link_list.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/link_list.js deleted file mode 100644 index 94c53776f2..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/link_list.js +++ /dev/null @@ -1,80 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'link_list.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - -function DataTypeList(element, data, max_width, max_height) { - var margin = {top:10, right:10, bottom:10, left:10}; - var width = max_width - margin.left - margin.right; - var height = max_height - margin.top - margin.bottom; - - this.root_elemenet = element; - this.click_function = null; - - var title = this.root_elemenet - .append("div") - .style("width", max_width + "px") - .attr("class", "list-title") - .text("Data types"); - - this.table = this.root_elemenet - .append("div") - .style("overflow-y", "scroll") - .style("overflow-x", "hidden") - .style("margin", "0px") - .style("padding", "0px") - .style("width", max_width + "px") - .style("height", height + "px") - .append("table") - .style("width", (max_width - 30) + "px") - .style("table-layout", "fixed"); - - this.fillTable(data); -} - -DataTypeList.prototype.fillTable = function(data) { - var self = this; - - var tbody = this.table.append("tbody"); - - var rows = tbody.selectAll(".list-item") - .data(data) - .enter() - .append("tr"); - - rows.append("td") - .attr("class", "list-item") - .on("click", function(d, i) { - if (self.click_function != null) { - self.click_function(d["name"]); - } - }) - .text(function (d) { - if(d["highlight"]) { - return "* " + d["name"]; - } - return d["name"]; - }); - -}; - -DataTypeList.prototype.updateList = function (data) { - this.table.select("tbody").remove("tbody"); - this.fillTable(data); -}; - -DataTypeList.prototype.setClickFunction = function(click_function) { - this.click_function = click_function; -}; - diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/plot.js deleted file mode 100644 index 08b65a8a90..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot.js +++ /dev/null @@ -1,277 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'plot.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - - -function Plot(element, data) { - this.stored_data = []; - this.margin = {left: 90, right: 20, top: 20, bottom: 30}; - this.root_elemenet = element; - - var group = this.root_elemenet.append("div") - .attr("class", "plot"); - - - this.title = group.append("div") - .attr("class", "plot-title") - .text(data.name); - - this.plot_group = group.append("svg") - .attr("class", "plot-svg"); - - this.legend_group = group.append("div") - .attr("class", "plot-legend-group"); - - this.width = 1024 - this.margin.left - this.margin.right; - this.height = 512 - this.margin.top - this.margin.bottom; - - this.svg = this.plot_group - .append("g") - .attr("transform", "translate(" + this.margin.left + "," + this.margin.top + ")") - .style("width", this.width + "px") - .style("height", this.height + "px") - .attr("fill", "rgb(255, 128, 0)"); - - this.x_scale = d3.time.scale().range([0, this.width]); - this.y_scale = d3.scale.linear().range([this.height, 0]).nice(); - - this.y_axis = d3.svg.axis() - .scale(this.y_scale) - .ticks(10) - .tickPadding(10) - .orient("left") - .tickSize(-this.width, -this.width); - - this.x_axis = d3.svg.axis() - .scale(this.x_scale) - .ticks(10) - .tickPadding(10) - .orient("bottom") - .tickSubdivide(true); - - this.plot_group.append("g") - .attr("class", "y axis pale") - .attr("transform", "translate(" + this.margin.left + "," + this.margin.top + ")") - .call(this.y_axis); - - this.plot_group.append("g") - .attr("class", "x axis") - .attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")") - .call(this.x_axis); - - - var self = this; - this.plot = this.svg.append("g"); - - this.adjustY = function(y, std) { - if(y >= 0) { - y = Math.max(0, y - std); - } else { - y -= std - } - return y; - }; - - var top_function = function(d) { - return d["y"] + d["std"]; - }; - - var bottom_function = function(d) { - return self.adjustY(d["y"], d["std"]); - }; - - this.x = function (d) { - return self.x_scale(new Date(d["x"] * 1000)); - }; - - this.y = function (d) { - return self.y_scale(d["y"]); - }; - - this.y_min = function (d) { - return self.y_scale(bottom_function(d)); - }; - - this.y_max = function (d) { - return self.y_scale(top_function(d)); - }; - - this.duration = 0; - - this.std_plot = StdPlot() - .radius(2.5) - .x(this.x) - .y(this.y) - .y_max(this.y_max) - .y_min(this.y_min) - .style("observation-std-point") - .duration(this.duration); - - this.observation_line = PlotLine() - .x(this.x) - .y(this.y) - .style("observation-plot-line") - .duration(this.duration); - - this.observation_std_area = PlotArea() - .x(this.x) - .y_min(this.y_min) - .y_max(this.y_max) - .style("observation-plot-area") - .duration(this.duration); - - this.refcase_line = PlotLine() - .x(this.x) - .y(this.y) - .style("refcase-plot-line") - .duration(this.duration); - - - this.ensemble_styles = ["ensemble-plot-1", "ensemble-plot-2", "ensemble-plot-3", "ensemble-plot-4", "ensemble-plot-5"]; - this.ensemble_lines = {}; - for (var index in this.ensemble_styles) { - var style = this.ensemble_styles[index]; - this.ensemble_lines[style] = PlotLine() - .x(this.x) - .y(this.y) - .style(style) - .duration(this.duration); - } - - this.legend = PlotLegend(); - -} - -Plot.prototype.resize = function(width, height) { - //Some magic margins... - width = width - 80; - height = height - 70; - - this.width = width - this.margin.left - this.margin.right; - this.height = height - this.margin.top - this.margin.bottom; - - this.x_scale.range([0, this.width]); - this.y_scale.range([this.height, 0]).nice(); - - this.y_axis.tickSize(-this.width, -this.width); - - this.plot_group.style("width", width + "px"); - this.plot_group.style("height", height + "px"); - - this.svg.style("width", this.width + "px"); - this.svg.style("height", this.height + "px"); - - this.setData(this.stored_data); - - this.plot_group.select(".x.axis") - .attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")"); -}; - - - -Plot.prototype.setData = function(data) { - this.stored_data = data; - - this.title.text(data["name"]); - - var min = data["min_y"]; - var max = data["max_y"]; - this.y_scale.domain([min, max]).nice(); - this.x_scale.domain([new Date(data["min_x"] * 1000), new Date(data["max_x"] * 1000)]).nice(); - - var legends = []; - - var observation_std_points; - var observation_line; - var observation_std_area; - - - if(data["observations"] != null) { - - var observation_samples = data["observations"]["samples"]; - - if(data["observations"]["continuous_line"]) { - observation_line = this.plot.selectAll(".observation-plot-line").data([observation_samples]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([observation_samples]); - observation_std_points = this.plot.selectAll(".observation-std-point").data([]); - - legends.push({"style": "observation-plot-line", "name": "Observation"}); - legends.push({"style": "observation-plot-area", "name": "Observation error"}); - } else { - observation_line = this.plot.selectAll(".observation-plot-line").data([]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([]); - observation_std_points = this.plot.selectAll(".observation-std-point").data(observation_samples); - - legends.push({"style": "observation-std-point", "name": "Observation error bar"}); - } - - observation_line.call(this.observation_line); - observation_std_area.call(this.observation_std_area); - observation_std_points.call(this.std_plot); - } else { - observation_line = this.plot.selectAll(".observation-plot-line").data([]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([]); - observation_std_points = this.plot.selectAll(".observation-std-point").data([]); - - observation_line.call(this.observation_line); - observation_std_area.call(this.observation_std_area); - observation_std_points.call(this.std_plot); - } - - - var refcase_line; - - if(data["refcase"] != null) { - var refcase_samples = data["refcase"]["samples"]; - refcase_line = this.plot.selectAll(".refcase-plot-line").data([refcase_samples]); - refcase_line.call(this.refcase_line); - - legends.push({"style": "refcase-plot-line", "name": "Refcase"}); - - } else { - refcase_line = this.plot.selectAll(".refcase-plot-line").data([]); - refcase_line.call(this.refcase_line); - } - - for(var ensemble_index in data["ensemble_names"]) { - var ensemble_style = this.ensemble_styles[ensemble_index]; - var name = data["ensemble_names"][ensemble_index]; - - var ensemble_samples = []; - for (var index = 0; index < data["ensemble"][ensemble_index].length; index++) { - ensemble_samples.push(data["ensemble"][ensemble_index][index]["samples"]); - } - var ensemble_lines = this.plot.selectAll("." + ensemble_style).data(ensemble_samples); - ensemble_lines.call(this.ensemble_lines[ensemble_style]); - - legends.push({"style": ensemble_style, "name": data["ensemble_names"][ensemble_index]}); - } - - var from = 0; - if (data["ensemble_names"] != null) { - from = data["ensemble_names"].length; - } - - for(var style_index = from; style_index < this.ensemble_styles.length; style_index++) { - var style = this.ensemble_styles[style_index]; - var removed_ensemble_lines = this.plot.selectAll("." + style).data([]); - removed_ensemble_lines.call(this.ensemble_lines[style]); - } - - this.legend_group.selectAll(".plot-legend").data(legends).call(this.legend); - - this.plot_group.select(".y.axis").transition().duration(this.duration).call(this.y_axis); - this.plot_group.select(".x.axis").transition().duration(this.duration).call(this.x_axis); -}; \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_area.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_area.js deleted file mode 100644 index 9e3c8b0b66..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_area.js +++ /dev/null @@ -1,83 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'plot_area.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - - -function PlotArea() { - var x = function(d) { return d[0];}; - var y_min = function(d) { return d[1];}; - var y_max = function(d) { return d[1];}; - var duration = 250; - var plot_style = ""; - - - function plot(selection) { - var area = d3.svg.area().x(x).y0(y_min).y1(y_max).interpolate("basis"); - - selection.transition() - .duration(duration) - .attr("d", area); - - selection.enter() - .append("path") - .attr("class", plot_style) - .attr("d", area) - .style("opacity", 0.0) - .transition() - .duration(duration) - .style("opacity", 1.0); - - selection.exit() - .transition() - .duration(duration) - .style("opacity", 0.0) - .remove(); - - } - - - plot.duration = function(value) { - if (!arguments.length) return duration; - duration = value; - return plot; - }; - - plot.x = function(value) { - if (!arguments.length) return x; - x = value; - return plot; - }; - - plot.y_min = function(value) { - if (!arguments.length) return y_min; - y_min = value; - return plot; - }; - - plot.y_max = function(value) { - if (!arguments.length) return y_max; - y_max = value; - return plot; - }; - - plot.style = function(value) { - if (!arguments.length) return plot_style; - plot_style = value; - return plot; - }; - - return plot; - -} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_legend.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_legend.js deleted file mode 100644 index 8653cb851e..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_legend.js +++ /dev/null @@ -1,67 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'plot_legend.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - - -function PlotLegend() { - - var size = 12; - - function legend(selection) { - var groups = selection.enter() - .append("div") - .attr("class", "plot-legend"); - - - groups.append("svg") - .attr("width", size + "px") - .attr("height", size + "px") - .append("rect") - .attr("width", (size - 2) + "px") - .attr("height", (size - 2) + "px") - .attr("transform", "translate(1,1)") - .attr("class", function(d) { - return "legend-marker " + d["style"]; - }); - - - selection.selectAll(".legend-marker") - .data(function(d) {return [d];}) - .transition() - .attr("class", function(d) { - return "legend-marker " + d["style"]; - }); - - groups.append("div") - .attr("class", "plot-legend-label") - .text(function(d) { - return d["name"]; - }); - - var labels = selection.selectAll(".plot-legend-label") - .data(function(d) { - return [d]; - }) - .transition() - .text(function(d) { - return d["name"]; - }); - - selection.exit() - .remove(); - } - return legend; - -} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_line.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_line.js deleted file mode 100644 index f4f3f3da34..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_line.js +++ /dev/null @@ -1,75 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'plot_line.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - - -function PlotLine() { - var x = function(d) { return d[0];}; - var y = function(d) { return d[1];}; - var duration = 250; - var plot_style = ""; - - function plot(selection) { - var line = d3.svg.line().x(x).y(y).interpolate("basis"); - - selection.transition() - .duration(duration) - .attr("d", line); - - selection.enter() - .append("path") - .attr("class", plot_style) - .attr("d", line) - .style("fill", "none") - .style("opacity", 0.0) - .transition() - .duration(duration) - .style("opacity", 1.0); - - selection.exit() - .transition() - .duration(duration) - .style("opacity", 0.0) - .remove(); - } - - - plot.duration = function(value) { - if (!arguments.length) return duration; - duration = value; - return plot; - }; - - plot.x = function(value) { - if (!arguments.length) return x; - x = value; - return plot; - }; - - plot.y = function(value) { - if (!arguments.length) return y; - y = value; - return plot; - }; - - plot.style = function(value) { - if (!arguments.length) return plot_style; - plot_style = value; - return plot; - }; - - return plot; - -} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_overview.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_overview.js deleted file mode 100644 index ad7baaf0d3..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/plot_overview.js +++ /dev/null @@ -1,290 +0,0 @@ -// Copyright (C) 2013 Statoil ASA, Norway. -// -// The file 'plot_overview.js' is part of ERT - Ensemble based Reservoir Tool. -// -// ERT is free software: you can redistribute it and/or modify -// it under the terms of the GNU General Public License as published by -// the Free Software Foundation, either version 3 of the License, or -// (at your option) any later version. -// -// ERT is distributed in the hope that it will be useful, but WITHOUT ANY -// WARRANTY; without even the implied warranty of MERCHANTABILITY or -// FITNESS FOR A PARTICULAR PURPOSE. -// -// See the GNU General Public License at -// for more details. - - -function Plot(element, data) { - this.stored_data = []; - this.margin = {left: 90, right: 20, top: 20, bottom: 30}; - this.root_elemenet = element; - - var group = this.root_elemenet.append("div") - .attr("class", "plot"); - - - this.title = group.append("div") - .attr("class", "plot-title") - .text(data.name); - - this.plot_group = group.append("svg") - .attr("class", "plot-svg"); - - this.legend_group = group.append("div") - .attr("class", "plot-legend-group"); - - this.width = 1024 - this.margin.left - this.margin.right; - this.height = 512 - this.margin.top - this.margin.bottom; - - this.svg = this.plot_group - .append("g") - .attr("transform", "translate(" + this.margin.left + "," + this.margin.top + ")") - .style("width", this.width + "px") - .style("height", this.height + "px"); - - this.x_scale = d3.time.scale().range([0, this.width]); - this.y_scale = d3.scale.linear().range([this.height, 0]).nice(); - - this.y_axis = d3.svg.axis() - .scale(this.y_scale) - .ticks(10) - .tickPadding(10) - .orient("left") - .tickSize(-this.width, -this.width); - - this.x_axis = d3.svg.axis() - .scale(this.x_scale) - .ticks(10) - .tickPadding(10) - .orient("bottom") - .tickSubdivide(true); - - this.plot_group.append("g") - .attr("class", "y axis pale") - .attr("transform", "translate(" + this.margin.left + "," + this.margin.top + ")") - .call(this.y_axis); - - this.plot_group.append("g") - .attr("class", "x axis") - .attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")") - .call(this.x_axis); - - - var self = this; - this.plot = this.svg.append("g"); - - this.adjustY = function(y, std) { - if(y >= 0) { - y = Math.max(0, y - std); - } else { - y -= std - } - return y; - }; - - var top_function = function(d) { - return d["y"] + d["std"]; - }; - - var bottom_function = function(d) { - return self.adjustY(d["y"], d["std"]); - }; - - this.x = function (d) { - return self.x_scale(new Date(d["x"] * 1000)); - }; - - this.y = function (d) { - return self.y_scale(d["y"]); - }; - - this.y_min = function (d) { - return self.y_scale(bottom_function(d)); - }; - - this.y_max = function (d) { - return self.y_scale(top_function(d)); - }; - - this.y_overview_min = function (d) { - return self.y_scale(d["min_y"]); - }; - - this.y_overview_max = function (d) { - return self.y_scale(d["max_y"]); - }; - - this.x_overview = function (d) { - return self.x_scale(new Date(d["max_x"] * 1000)); - }; - - this.duration = 0; - - this.std_plot = StdPlot() - .radius(2.5) - .x(this.x) - .y(this.y) - .y_max(this.y_max) - .y_min(this.y_min) - .style("observation-std-point") - .duration(this.duration); - - this.observation_line = PlotLine() - .x(this.x) - .y(this.y) - .style("observation-plot-line") - .duration(this.duration); - - this.observation_std_area = PlotArea() - .x(this.x) - .y_min(this.y_min) - .y_max(this.y_max) - .style("observation-plot-area") - .duration(this.duration); - - this.refcase_line = PlotLine() - .x(this.x) - .y(this.y) - .style("refcase-plot-line") - .duration(this.duration); - - - this.ensemble_styles = ["ensemble-plot-1", "ensemble-plot-2", "ensemble-plot-3", "ensemble-plot-4", "ensemble-plot-5"]; - this.ensemble_areas = {}; - for (var index in this.ensemble_styles) { - var style = this.ensemble_styles[index]; - this.ensemble_areas[style] = PlotArea() - .x(this.x_overview) - .y_min(this.y_overview_min) - .y_max(this.y_overview_max) - .style(style) - .duration(this.duration); - } - - - this.legend = PlotLegend(); - -} - -Plot.prototype.resize = function(width, height) { - //Some magic margins... - width = width - 80; - height = height - 70; - - this.width = width - this.margin.left - this.margin.right; - this.height = height - this.margin.top - this.margin.bottom; - - this.x_scale.range([0, this.width]); - this.y_scale.range([this.height, 0]).nice(); - - this.y_axis.tickSize(-this.width, -this.width); - - this.plot_group.style("width", width + "px"); - this.plot_group.style("height", height + "px"); - - this.svg.style("width", this.width + "px"); - this.svg.style("height", this.height + "px"); - - this.setData(this.stored_data); - - this.plot_group.select(".x.axis") - .attr("transform", "translate(" + this.margin.left + ", " + (this.height + this.margin.top) + ")"); -}; - - - -Plot.prototype.setData = function(data) { - this.stored_data = data; - - this.title.text(data["name"]); - - var min = data["min_y"]; - var max = data["max_y"]; - this.y_scale.domain([min, max]).nice(); - this.x_scale.domain([new Date(data["min_x"] * 1000), new Date(data["max_x"] * 1000)]).nice(); - - - var legends = []; - - var observation_std_points; - var observation_line; - var observation_std_area; - - - if(data["observations"] != null) { - - var observation_samples = data["observations"]["samples"]; - - if(data["observations"]["continuous_line"]) { - observation_line = this.plot.selectAll(".observation-plot-line").data([observation_samples]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([observation_samples]); - observation_std_points = this.plot.selectAll(".observation-std-point").data([]); - - legends.push({"style": "observation-plot-line", "name": "Observation"}); - legends.push({"style": "observation-plot-area", "name": "Observation error"}); - } else { - observation_line = this.plot.selectAll(".observation-plot-line").data([]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([]); - observation_std_points = this.plot.selectAll(".observation-std-point").data(observation_samples); - - legends.push({"style": "observation-std-point", "name": "Observation error bar"}); - } - - observation_line.call(this.observation_line); - observation_std_area.call(this.observation_std_area); - observation_std_points.call(this.std_plot); - - } else { - observation_line = this.plot.selectAll(".observation-plot-line").data([]); - observation_std_area = this.plot.selectAll(".observation-plot-area").data([]); - observation_std_points = this.plot.selectAll(".observation-std-point").data([]); - - observation_line.call(this.observation_line); - observation_std_area.call(this.observation_std_area); - observation_std_points.call(this.std_plot); - } - - - var refcase_line; - - if(data["refcase"] != null) { - var refcase_samples = data["refcase"]["samples"]; - refcase_line = this.plot.selectAll(".refcase-plot-line").data([refcase_samples]); - refcase_line.call(this.refcase_line); - - legends.push({"style": "refcase-plot-line", "name": "Refcase"}); - - } else { - refcase_line = this.plot.selectAll(".refcase-plot-line").data([]); - refcase_line.call(this.refcase_line); - } - - - for(var ensemble_index in data["ensemble_statistics"]) { - var ensemble_style = this.ensemble_styles[ensemble_index]; - var name = data["ensemble_statistics"][ensemble_index]; - - var ensemble_samples = data["ensemble_statistics"][ensemble_index]; - var ensemble_areas = this.plot.selectAll("." + ensemble_style).data([ensemble_samples]); - ensemble_areas.call(this.ensemble_areas[ensemble_style]); - - legends.push({"style": ensemble_style, "name": data["ensemble_names"][ensemble_index]}); - } - - var from = 0; - if (data["ensemble_statistics"] != null) { - from = data["ensemble_names"].length; - } - - for(var style_index = from; style_index < this.ensemble_styles.length; style_index++) { - var style = this.ensemble_styles[style_index]; - var removed_ensemble_lines = this.plot.selectAll("." + style).data([]); - removed_ensemble_lines.call(this.ensemble_areas[style]); - } - - this.legend_group.selectAll(".plot-legend").data(legends).call(this.legend); - - this.plot_group.select(".y.axis").transition().duration(this.duration).call(this.y_axis); - this.plot_group.select(".x.axis").transition().duration(this.duration).call(this.x_axis); -}; \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/render_tracker.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/render_tracker.js new file mode 100644 index 0000000000..c7d02e68f5 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/render_tracker.js @@ -0,0 +1,92 @@ +// Copyright (C) 2013 Statoil ASA, Norway. +// +// The file 'render_tracker.js' is part of ERT - Ensemble based Reservoir Tool. +// +// ERT is free software: you can redistribute it and/or modify +// it under the terms of the GNU General Public License as published by +// the Free Software Foundation, either version 3 of the License, or +// (at your option) any later version. +// +// ERT is distributed in the hope that it will be useful, but WITHOUT ANY +// WARRANTY; without even the implied warranty of MERCHANTABILITY or +// FITNESS FOR A PARTICULAR PURPOSE. +// +// See the GNU General Public License at +// for more details. + +function IncrementalRenderTracker() { + this.rendering_start = null; + this.max_loop_time = 500; + this.is_running = false; + this.should_stop = false; + + this.loop_start = null; + +} + +IncrementalRenderTracker.prototype.start = function(render_function) { + if(this.is_running) { +// console.log("Rendering -> activating kill!"); + this.should_stop = true; + } + + this.run(this, render_function); +}; + + +IncrementalRenderTracker.prototype.run = function(self, render_function) { + if(!this.is_running) { + this.rendering_start = Date.now(); + this.is_running = true; + this.should_stop = false; + + render_function(); + + } else { +// console.log("Waiting!"); + window.setTimeout(function() { self.run(self, render_function); }, 15); + } +}; + + +IncrementalRenderTracker.prototype.shouldStop = function() { + return this.should_stop; +}; + + +IncrementalRenderTracker.prototype.loopStart = function() { + this.loop_start = Date.now(); +}; + +IncrementalRenderTracker.prototype.shouldLoopStop = function() { + return (Date.now() - this.loop_start) > this.max_loop_time; +}; + +IncrementalRenderTracker.prototype.stoppedRendering = function() { + this.is_running = false; + this.should_stop = false; +// console.log("Rendering time: " + this.runningTime() + " ms"); +}; + +IncrementalRenderTracker.prototype.isRunning = function() { + return this.is_running; +}; + +IncrementalRenderTracker.prototype.runningTime = function() { + return (Date.now() - this.rendering_start); +}; + +IncrementalRenderTracker.prototype.forceStop = function() { + this.should_stop = true; +}; + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/std_plot.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/std_plot.js deleted file mode 100644 index 9698975c74..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/scripts/std_plot.js +++ /dev/null @@ -1,129 +0,0 @@ -function StdPlot() { - var radius = 1; - var x = function(d) { return d[0];}; - var y = function(d) { return d[1];}; - var y_max = function(d) { return d[1] + 1;}; - var y_min = function(d) { return d[1] - 1;}; - var duration = 250; - var plot_style = ""; - - function createLine(selection, name, x1, x2, y1, y2) { - var line = selection.selectAll("." + name).data(function(d) {return [d];}); - - line.transition() - .duration(duration) - .attr("x1", x1) - .attr("x2", x2) - .attr("y1", y1) - .attr("y2", y2); - - line.enter() - .append("line") - .attr("class", name) - .attr("x1", x1) - .attr("x2", x2) - .attr("y1", y1) - .attr("y2", y2) - .style("opacity", 0.0) - .transition() - .duration(duration) - .style("opacity", 1.0); - - line.exit() - .transition() - .duration(duration) - .style("opacity", 0) - .remove(); - - return line - } - - function plot(selection) { - selection.enter().append("g").attr("class", plot_style); - - selection.exit().transition().duration(duration).style("opacity", 0).remove(); - - var circle = selection.selectAll(".std-value").data(function(d) {return [d];}); - - - circle.transition() - .duration(duration) - .attr("cx", x) - .attr("cy", y); - - circle.enter() - .append("circle") - .attr("class", "std-value") - .attr("cx", x) - .attr("cy", y) - .attr("r", radius).style("opacity", 0.0) - .transition() - .duration(duration) - .style("opacity", 1.0); - - - circle.exit() - .transition() - .duration(duration) - .style("opacity", 0) - .remove(); - - - - var cap_x1 = function(d) { return x(d) - radius;}; - var cap_x2 = function(d) { return x(d) + radius;}; - var y_m_r = function(d) { return y(d) - radius;}; - var y_p_r = function(d) { return y(d) + radius;}; - - var top_line = createLine(selection, "top-center-line", x, x, y_m_r, y_max); - var top_cap_line = createLine(selection, "top-cap-line", cap_x1, cap_x2, y_max, y_max); - - var bottom_line = createLine(selection, "bottom-center-line", x, x, y_p_r, y_min); - var bottom_cap_line = createLine(selection, "bottom-cap-line", cap_x1, cap_x2, y_min, y_min); - } - - - plot.radius = function(value) { - if (!arguments.length) return radius; - radius = value; - return plot; - }; - - plot.duration = function(value) { - if (!arguments.length) return duration; - duration = value; - return plot; - }; - - plot.x = function(value) { - if (!arguments.length) return x; - x = value; - return plot; - }; - - plot.y = function(value) { - if (!arguments.length) return y; - y = value; - return plot; - }; - - plot.y_max = function(value) { - if (!arguments.length) return y_max; - y_max = value; - return plot; - }; - - plot.y_min = function(value) { - if (!arguments.length) return y_min; - y_min = value; - return plot; - }; - - plot.style = function(value) { - if (!arguments.length) return plot_style; - plot_style = value; - return plot; - }; - - return plot; -} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/scripts/styles.js b/ThirdParty/Ert/devel/share/gui/plots/scripts/styles.js new file mode 100644 index 0000000000..394a075ff6 --- /dev/null +++ b/ThirdParty/Ert/devel/share/gui/plots/scripts/styles.js @@ -0,0 +1,201 @@ +var STYLES = { + default: { + stroke: "rgba(0, 0, 0, 1.0)", + fill: "rgba(200, 200, 200, 1.0)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + observation: { + stroke: "rgba(0, 0, 0, 1.0)", + fill: "rgba(0, 0, 0, 0.0)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + observation_error_bar: { + stroke: "rgba(0, 0, 0, 1.0)", + fill: "rgba(0, 0, 0, 0.0)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + observation_area: { + stroke: "rgba(0, 0, 0, 0.15)", + fill: "rgba(0, 0, 0, 0.2)", + stroke_width: 2, + dash_array: [], + line_cap: "butt" + }, + refcase: { + stroke: "rgba(0, 0, 0, 0.7)", + fill: "rgba(0, 0, 0, 0.0)", + stroke_width: 1.5, + dash_array: [], + line_cap: "butt" + }, + ensemble_1: { + stroke: "rgba(56, 108, 176, 0.8)", + fill: "rgba(56, 108, 176, 0.5)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + ensemble_2: { + stroke: "rgba(127, 201, 127, 0.8)", + fill: "rgba(127, 201, 127, 0.5)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + ensemble_3: { + stroke: "rgba(253, 192, 134, 0.8)", + fill: "rgba(253, 192, 134, 0.5)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + ensemble_4: { + stroke: "rgba(240, 2, 127, 0.8)", + fill: "rgba(240, 2, 127, 0.5)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + ensemble_5: { + stroke: "rgba(191, 91, 23, 0.8)", + fill: "rgba(191, 91, 23, 0.5)", + stroke_width: 1, + dash_array: [], + line_cap: "butt" + }, + + ensemble_colors: ["ensemble_1", "ensemble_2", "ensemble_3", "ensemble_4", "ensemble_5"] + +}; + + +STYLES.parseColor = function(input) { + var result = [255, 255, 255, 1]; + + var match = input.match(/^rgba\s*\(\s*(\d+)\s*,\s*(\d+)\s*,\s*(\d+)\s*,\s*(\d+\.?\d*)\s*\)$/i); + if(match) { + result[0] = match[1]; + result[1] = match[2]; + result[2] = match[3]; + result[3] = parseFloat(match[4]); + return result; + } + + return result; +}; + + +STYLES.asRgb = function(r, g, b) { + return "rgb(" + r + "," + g + "," + b + ")"; +}; + +STYLES.asRgba = function(r, g, b, a) { + return "rgba(" + r + "," + g + "," + b + "," + a + ")"; +}; + + +STYLES.componentToHex = function(c) { + var hex = c.toString(16); + return hex.length == 1 ? "0" + hex : hex; +}; + +STYLES.rgbToHex = function(r, g, b) { + return "#" + CanvasPlotLegend.componentToHex(r) + CanvasPlotLegend.componentToHex(g) + CanvasPlotLegend.componentToHex(b); +}; + +STYLES.darker = function(color) { + var rgba = STYLES.parseColor(color); + + var f = 0.80; + var a = rgba[3]; + var r = parseInt(rgba[0] * f); + var g = parseInt(rgba[1] * f); + var b = parseInt(rgba[2] * f); + + return STYLES.asRgba(r, g, b, a); +}; + +STYLES.blendWithWhite = function(color, result_alpha) { + var rgba = STYLES.parseColor(color); + + var a = rgba[3]; + var ab = (1 - rgba[3]) * 255; + var r = parseInt(rgba[0] * a + ab); + var g = parseInt(rgba[1] * a + ab); + var b = parseInt(rgba[2] * a + ab); + + return STYLES.asRgba(r, g, b, result_alpha); +}; + +STYLES.createFillColor = function(color, fill_alpha, blend_with_white_alpha) { + var rgba = STYLES.parseColor(color); + rgba[3] = fill_alpha; + return STYLES.blendWithWhite(STYLES.asRgba(rgba[0], rgba[1], rgba[2], rgba[3]), blend_with_white_alpha); +}; + + +STYLES.updateColors = function(settings) { + var alpha = 0.7; + var fill_alpha = 0.5; + if("observation" in settings) { + STYLES["observation"]["stroke"] = settings["observation"]; + } + + if("observation_error_bar" in settings) { + STYLES["observation_error_bar"]["stroke"] = settings["observation_error_bar"]; + } + + if("observation_area" in settings) { + STYLES["observation_area"]["stroke"] = settings["observation_area"]; + STYLES["observation_area"]["fill"] = settings["observation_area"]; + } + + if("refcase" in settings) { + STYLES["refcase"]["stroke"] = settings["refcase"]; + } + + if("ensemble_1" in settings) { + STYLES["ensemble_1"]["stroke"] = settings["ensemble_1"]; +// STYLES["ensemble_1"]["fill"] = settings["ensemble_1"]; + STYLES["ensemble_1"]["fill"] = STYLES.createFillColor(settings["ensemble_1"], fill_alpha, alpha); + } + + if("ensemble_2" in settings) { + STYLES["ensemble_2"]["stroke"] = settings["ensemble_2"]; + STYLES["ensemble_2"]["fill"] = STYLES.createFillColor(settings["ensemble_2"], fill_alpha, alpha); +// STYLES["ensemble_2"]["fill"] = settings["ensemble_2"]; + } + + if("ensemble_3" in settings) { + STYLES["ensemble_3"]["stroke"] = settings["ensemble_3"]; + STYLES["ensemble_3"]["fill"] = STYLES.createFillColor(settings["ensemble_3"], fill_alpha, alpha); +// STYLES["ensemble_3"]["fill"] = settings["ensemble_3"]; + } + + if("ensemble_4" in settings) { + STYLES["ensemble_4"]["stroke"] = settings["ensemble_4"]; + STYLES["ensemble_4"]["fill"] = STYLES.createFillColor(settings["ensemble_4"], fill_alpha, alpha); +// STYLES["ensemble_4"]["fill"] = settings["ensemble_4"]; + } + + if("ensemble_5" in settings) { + STYLES["ensemble_5"]["stroke"] = settings["ensemble_5"]; + STYLES["ensemble_5"]["fill"] = STYLES.createFillColor(settings["ensemble_5"], fill_alpha, alpha); +// STYLES["ensemble_5"]["fill"] = settings["ensemble_5"]; + } + +}; + + +var alpha = 0.7; +STYLES["ensemble_1"]["fill"] = STYLES.blendWithWhite(STYLES["ensemble_1"]["fill"], alpha); +STYLES["ensemble_2"]["fill"] = STYLES.blendWithWhite(STYLES["ensemble_2"]["fill"], alpha); +STYLES["ensemble_3"]["fill"] = STYLES.blendWithWhite(STYLES["ensemble_3"]["fill"], alpha); +STYLES["ensemble_4"]["fill"] = STYLES.blendWithWhite(STYLES["ensemble_4"]["fill"], alpha); +STYLES["ensemble_5"]["fill"] = STYLES.blendWithWhite(STYLES["ensemble_5"]["fill"], alpha); \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/simple_debug_plot.html b/ThirdParty/Ert/devel/share/gui/plots/simple_debug_plot.html deleted file mode 100644 index 6f75546a09..0000000000 --- a/ThirdParty/Ert/devel/share/gui/plots/simple_debug_plot.html +++ /dev/null @@ -1,88 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/gui/plots/simple_overview_plot.html b/ThirdParty/Ert/devel/share/gui/plots/simple_overview_plot.html index 3392c8051d..506cbe30cd 100644 --- a/ThirdParty/Ert/devel/share/gui/plots/simple_overview_plot.html +++ b/ThirdParty/Ert/devel/share/gui/plots/simple_overview_plot.html @@ -18,31 +18,28 @@ - - - - - - - + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/share/gui/plots/simple_plot.html b/ThirdParty/Ert/devel/share/gui/plots/simple_plot.html index 7d1617547f..a7f549f5e1 100644 --- a/ThirdParty/Ert/devel/share/gui/plots/simple_plot.html +++ b/ThirdParty/Ert/devel/share/gui/plots/simple_plot.html @@ -18,57 +18,137 @@ - - - - - - - - + + + + + + + + + + + + + diff --git a/ThirdParty/Ert/devel/share/gui/plots/style/plot.css b/ThirdParty/Ert/devel/share/gui/plots/style/plot.css index a9a7aad2b0..6ce4738592 100644 --- a/ThirdParty/Ert/devel/share/gui/plots/style/plot.css +++ b/ThirdParty/Ert/devel/share/gui/plots/style/plot.css @@ -14,8 +14,25 @@ /* See the GNU General Public License at */ /* for more details. */ +html { + height: 100%; +} + +body { + height: 90%; + background-color: #eee; +} + .plot { - margin: 20px; + margin: 5px; + padding: 10px; + border: 1px solid black; + background-color: white; + display: inline-block; +} + +.histogram { + margin: 5px; padding: 10px; border: 1px solid black; background-color: white; @@ -24,21 +41,24 @@ .plot-svg { display: block; - margin: 20px; + margin: 0; padding: 0; - width: 1024px; - height: 512px; } .plot-title { font-size: large; width: auto; text-align: center; - margin: 10px; + margin: 0px; /*color: goldenrod;*/ } + +.plot-area { + position: relative; +} + .plot-legend-group { /*background-color: #7FC97F;*/ margin-left: auto; @@ -56,7 +76,7 @@ .plot-legend-label { font-family: Helvetica,serif; - font-size: small; + font-size: medium; font-variant: small-caps; display: inline-block; padding-left: 5px; @@ -80,118 +100,57 @@ vertical-align: middle; } +/*.histograms {*/ +/*}*/ -.axis path, .axis line { - fill: none; - stroke: #000000; - shape-rendering: crispEdges; -} - -.axis line.minor { - fill: none; - stroke-dasharray: 1, 4; -} - -.pale line { - fill: none; - stroke: #999; - stroke-dasharray: 2, 2; -} - -.plot-line { - fill: none; +/*.histogram-div {*/ - stroke: #000; - stroke-opacity: 1; - stroke-width: 1px; -} +/*}*/ -.observation-plot-line { - fill: none; - stroke: #000; - stroke-opacity: 1; - stroke-width: 1px; - stroke-dasharray: 5, 5; +.histogram-svg { + display: block; + margin: 20px; + padding: 0; + width: 384px; + height: 256px; } -.observation-plot-area { - fill: #000; - fill-opacity: 0.15; +.histogram-title { + font-size: large; + width: auto; + text-align: center; + margin: 10px; + /*color: goldenrod;*/ - stroke: #000; - stroke-opacity: 0.2; - stroke-width: 2px; - stroke-dasharray: 5, 5; } -.observation-std-point { - fill: #ffffff; - fill-opacity: 0.0; +.axis path, .axis line { + fill: none; stroke: #000000; + shape-rendering: crispEdges; } -.refcase-plot-line { +.axis line.minor { fill: none; - - stroke: #000; - stroke-opacity: 1; - stroke-width: 2px; -} - -.ensemble-plot-1 { - fill: #386CB0; - fill-opacity: 0.3; - - /*stroke: #007fff;*/ - stroke: #386CB0; - stroke-opacity: 0.2; - stroke-width: 2px; -} - -.ensemble-plot-2 { - fill: #7FC97F; - fill-opacity: 0.3; - - /*stroke: #007fff;*/ - stroke: #7FC97F; - stroke-opacity: 0.2; - stroke-width: 2px; + stroke-dasharray: 1, 4; } -.ensemble-plot-3 { - fill: #FDC086; - fill-opacity: 0.3; - - /*stroke: #007fff;*/ - stroke: #FDC086; - stroke-opacity: 0.2; - stroke-width: 2px; +.pale line { + fill: none; + stroke: #999; + stroke-dasharray: 2, 2; } -.ensemble-plot-4 { - fill: #F0027F; - fill-opacity: 0.3; - /*stroke: #007fff;*/ - stroke: #F0027F; - stroke-opacity: 0.2; - stroke-width: 2px; +#axis-label-group { + width: auto; + text-align: center; } -.ensemble-plot-5 { - fill: #beaed4; - fill-opacity: 0.3; - /*stroke: #007fff;*/ - stroke: #beaed4; - stroke-opacity: 0.2; - stroke-width: 2px; +.axis-label { + font-size: small; + display: inline; + margin-right: 10px; } - - - -/*.area-fill:hover {*/ - /*fill: rgba(150, 150, 150, 0.1);*/ - -/*}*/ \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/viewer/shaders/default.fp b/ThirdParty/Ert/devel/share/viewer/shaders/default.fp new file mode 100644 index 0000000000..bd6ba38d8e --- /dev/null +++ b/ThirdParty/Ert/devel/share/viewer/shaders/default.fp @@ -0,0 +1,4 @@ +void main() { + gl_FragColor.rgb = gl_TexCoord[0].zyx; + gl_FragColor.a = 1.0; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/viewer/shaders/default.vp b/ThirdParty/Ert/devel/share/viewer/shaders/default.vp new file mode 100644 index 0000000000..9ead80e635 --- /dev/null +++ b/ThirdParty/Ert/devel/share/viewer/shaders/default.vp @@ -0,0 +1,33 @@ +#version 120 +uniform sampler3D grid; +uniform ivec3 grid_size; + +vec4 DELTA = vec4(1.0 / grid_size.x, 1.0 / grid_size.y, 1.0 / grid_size.z, 0.0); + +varying vec3 normal; + +vec4 fetchTexel(sampler3D sampler, vec3 p, vec3 offset) { + return texture3D(sampler, p + offset); +} + +void main() { + gl_TexCoord[0] = gl_TextureMatrix[0] * gl_MultiTexCoord0; + + vec3 xyz = texture3D(grid, gl_TexCoord[0].xyz).rgb; + vec4 p = vec4(gl_Vertex); + p.xyz = xyz; + //p.z = 1800.0; + + float s01 = fetchTexel(grid, gl_TexCoord[0].xyz, DELTA.xww).z; + float s21 = fetchTexel(grid, gl_TexCoord[0].xyz, -DELTA.xww).z; + float s10 = fetchTexel(grid, gl_TexCoord[0].xyz, DELTA.wyw).z; + float s12 = fetchTexel(grid, gl_TexCoord[0].xyz, -DELTA.wyw).z; + + vec3 va = normalize(vec3(2.0, 0.0, s21 - s01)); + vec3 vb = normalize(vec3(0.0, 2.0, s12 - s10)); + normal = normalize(cross(va, vb)); + + //normal = (gl_ModelViewMatrix * vec4(normal, 0.0)).xyz; + + gl_Position = gl_ModelViewProjectionMatrix * p; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/viewer/shaders/texturing.fp b/ThirdParty/Ert/devel/share/viewer/shaders/texturing.fp new file mode 100644 index 0000000000..b54cf81e72 --- /dev/null +++ b/ThirdParty/Ert/devel/share/viewer/shaders/texturing.fp @@ -0,0 +1,42 @@ +#version 120 +uniform sampler3D grid; +uniform sampler3D grid_data; +uniform sampler1D color_scale; + +uniform bool hide_inactive_cells; +uniform bool lighting; +uniform bool region_scaling; +uniform float data_range; + +varying vec3 normal; + + +void main() { + vec4 cell = texture3D(grid, gl_TexCoord[0].xyz); + + if(hide_inactive_cells && cell.w < 0.5) { + discard; + } + + float color_pos = texture3D(grid_data, gl_TexCoord[0].xyz).a; + + if(region_scaling) { + // data_range + 1 because [0-9] count = 10 + color_pos = color_pos * (data_range + 1) / 12.0; + } + + vec3 color = texture1D(color_scale, color_pos).rgb; + + //color = gl_TexCoord[0].yxz; + + if(lighting) { + float d = dot(normalize(normal), normalize(vec3(0.0, 0.0, 0.5))); + //d = clamp(d, 0.0, 1.0); + color = color + ((0.5 * color * d) - 0.25); + } + + + + gl_FragColor.rgb = color; + gl_FragColor.a = 1.0; +} \ No newline at end of file diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/CREATE_CASE b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/CREATE_CASE new file mode 100644 index 0000000000..6875fee2d0 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/CREATE_CASE @@ -0,0 +1,6 @@ +INTERNAL True +SCRIPT ../scripts/create_case.py +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/INIT_CASE_FROM_EXISTING b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/INIT_CASE_FROM_EXISTING new file mode 100644 index 0000000000..4c37a13fca --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/INIT_CASE_FROM_EXISTING @@ -0,0 +1,7 @@ +INTERNAL True +SCRIPT ../scripts/init_case_from_existing.py +MIN_ARG 1 +MAX_ARG 2 +ARG_TYPE 0 STRING +ARG_TYPE 1 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/SELECT_CASE b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/SELECT_CASE new file mode 100644 index 0000000000..bdd49d8888 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/config/SELECT_CASE @@ -0,0 +1,6 @@ +INTERNAL True +SCRIPT ../scripts/select_case.py +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/create_case.py b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/create_case.py new file mode 100644 index 0000000000..74c6380f1b --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/create_case.py @@ -0,0 +1,7 @@ +from ert.enkf import ErtScript + +class CreateCaseJob(ErtScript): + + def run(self, case_name): + ert = self.ert() + fs = ert.getEnkfFsManager().getFileSystem(case_name) diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/init_case_from_existing.py b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/init_case_from_existing.py new file mode 100644 index 0000000000..ef8798552b --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/init_case_from_existing.py @@ -0,0 +1,17 @@ +from ert.enkf import ErtScript +from ert.enkf.enums.enkf_state_type_enum import EnkfStateType + + +class InitCaseFromExistingJob(ErtScript): + + def run(self, source_case, target_case=None): + ert = self.ert() + source_fs = ert.getEnkfFsManager().getFileSystem(source_case) + + if target_case is None: + target_fs = ert.getEnkfFsManager().getCurrentFileSystem() + + else: + target_fs = ert.getEnkfFsManager().getFileSystem(target_case) + + ert.getEnkfFsManager().initializeCaseFromExisting(source_fs, 0, EnkfStateType.ANALYZED, target_fs) diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/select_case.py b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/select_case.py new file mode 100644 index 0000000000..63f4456f9d --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-gui/scripts/select_case.py @@ -0,0 +1,9 @@ +from ert.enkf import ErtScript + +class SelectCaseJob(ErtScript): + + def run(self, case_name): + ert = self.ert() + fs = ert.getEnkfFsManager().getFileSystem(case_name) + ert.getEnkfFsManager().switchFileSystem(fs) + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/CREATE_CASE b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/CREATE_CASE new file mode 100644 index 0000000000..e59df565d8 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/CREATE_CASE @@ -0,0 +1,6 @@ +INTERNAL True +FUNCTION enkf_main_create_case_JOB +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/INIT_CASE_FROM_EXISTING b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/INIT_CASE_FROM_EXISTING new file mode 100644 index 0000000000..f9a1ba7a5e --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/INIT_CASE_FROM_EXISTING @@ -0,0 +1,7 @@ +INTERNAL True +FUNCTION enkf_main_init_case_from_existing_JOB +MIN_ARG 1 +MAX_ARG 2 +ARG_TYPE 0 STRING +ARG_TYPE 1 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/PLOT_ALL_SUMMARY b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/PLOT_ALL_SUMMARY similarity index 100% rename from ThirdParty/Ert/devel/share/workflows/jobs/internal/config/PLOT_ALL_SUMMARY rename to ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/PLOT_ALL_SUMMARY diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/SELECT_CASE b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/SELECT_CASE new file mode 100644 index 0000000000..3d77f14369 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal-tui/config/SELECT_CASE @@ -0,0 +1,6 @@ +INTERNAL True +FUNCTION enkf_main_select_case_JOB +MIN_ARG 1 +MAX_ARG 1 +ARG_TYPE 0 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_ENKF_UPDATE b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_ENKF_UPDATE new file mode 100644 index 0000000000..4dda5ef9d4 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_ENKF_UPDATE @@ -0,0 +1,5 @@ +INTERNAL True +FUNCTION enkf_main_analysis_enkf_update_JOB +MIN_ARG 1 +ARG_TYPE 0 INT + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_UPDATE b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_UPDATE new file mode 100644 index 0000000000..8c24df31cc --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ANALYSIS_UPDATE @@ -0,0 +1,6 @@ +INTERNAL True +FUNCTION enkf_main_analysis_update_JOB +MIN_ARG 0 +ARG_TYPE 0 STRING +ARG_TYPE 1 INT + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/DATA_RANKING b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/DATA_RANKING new file mode 100644 index 0000000000..514aac9c2e --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/DATA_RANKING @@ -0,0 +1,8 @@ +INTERNAL True +FUNCTION enkf_main_rank_on_data_JOB +MIN_ARG 3 +MAX_ARG 4 +ARG_TYPE 0 STRING +ARG_TYPE 1 STRING +ARG_TYPE 2 BOOL +ARG_TYPE 3 INT diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ENSEMBLE_RUN b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ENSEMBLE_RUN index 08fb5958f7..8bdc4b1da2 100644 --- a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ENSEMBLE_RUN +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/ENSEMBLE_RUN @@ -1,4 +1,6 @@ INTERNAL True FUNCTION enkf_main_ensemble_run_JOB +MIN_ARG 0 +ARG_TYPE 0 STRING diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RANKING b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RANKING new file mode 100644 index 0000000000..0ef0614609 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RANKING @@ -0,0 +1,7 @@ +INTERNAL True +FUNCTION enkf_main_export_ranking_JOB +MIN_ARG 2 +MAX_ARG 2 +ARG_TYPE 0 STRING +ARG_TYPE 1 STRING + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RUNPATH b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RUNPATH new file mode 100644 index 0000000000..753f9e9c9f --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/EXPORT_RUNPATH @@ -0,0 +1,3 @@ +INTERNAL True +FUNCTION enkf_main_export_runpath_file_JOB + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/INIT_MISFIT_TABLE b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/INIT_MISFIT_TABLE new file mode 100644 index 0000000000..a798874f59 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/INIT_MISFIT_TABLE @@ -0,0 +1,4 @@ +INTERNAL True +FUNCTION enkf_main_init_misfit_table_JOB +MIN_ARG 0 + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS new file mode 100644 index 0000000000..8be9a06ecd --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS @@ -0,0 +1,3 @@ +INTERNAL True +FUNCTION enkf_main_load_results_JOB + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS_ITER b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS_ITER new file mode 100644 index 0000000000..e81802426e --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/LOAD_RESULTS_ITER @@ -0,0 +1,5 @@ +INTERNAL True +FUNCTION enkf_main_load_results_iter_JOB +MIN_ARG 1 +ARG_TYPE 0 INT + diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/OBSERVATION_RANKING b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/OBSERVATION_RANKING new file mode 100644 index 0000000000..23b8402bb6 --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/OBSERVATION_RANKING @@ -0,0 +1,4 @@ +INTERNAL True +FUNCTION enkf_main_rank_on_observations_JOB +MIN_ARG 1 +ARG_TYPE 0 STRING diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER index 24a7aef494..d553ab3baf 100644 --- a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER @@ -1,6 +1,7 @@ INTERNAL True FUNCTION enkf_main_smoother_JOB MIN_ARG 0 -MAX_ARG 1 +MAX_ARG 2 ARG_TYPE 0 STRING +ARG_TYPE 1 BOOL diff --git a/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER_WITH_ITER b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER_WITH_ITER new file mode 100644 index 0000000000..15ab1a9dcf --- /dev/null +++ b/ThirdParty/Ert/devel/share/workflows/jobs/internal/config/RUN_SMOOTHER_WITH_ITER @@ -0,0 +1,8 @@ +INTERNAL True +FUNCTION enkf_main_smoother_with_iter_JOB +MIN_ARG 1 +MAX_ARG 3 +ARG_TYPE 0 INT +ARG_TYPE 1 STRING +ARG_TYPE 2 BOOL + diff --git a/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault1.grdecl b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault1.grdecl new file mode 100644 index 0000000000..7094f164b4 --- /dev/null +++ b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault1.grdecl @@ -0,0 +1,81 @@ +FAULTS +-- NAME IX1 IX2 IY1 IY2 IZ1 IZ2 FACE + +'F1' 126 126 52 52 43 43 'X' / +'F1' 127 127 51 51 1 43 'X' / +'F1' 127 127 51 51 1 43 'Y' / +'F1' 128 128 50 50 1 43 'X' / +'F1' 128 128 50 50 1 43 'Y' / +'F1' 129 129 49 49 6 43 'X' / +'F1' 129 129 49 49 1 43 'Y' / +'F1' 130 130 48 48 1 43 'X' / +'F1' 130 130 48 48 1 10 'Y' / +'F1' 131 131 47 47 1 43 'X' / +'F1' 131 131 47 47 1 43 'Y' / +'F1' 132 132 46 46 1 43 'X' / +'F1' 132 132 46 46 1 43 'Y' / +'F1' 133 133 45 45 1 43 'X' / +'F1' 133 133 45 45 1 43 'Y' / +'F1' 134 134 44 44 1 43 'Y' / +'F1' 134 134 43 44 1 43 'X' / +'F1' 135 135 42 42 1 43 'Y' / +'F1' 135 135 41 42 1 43 'X' / +'F1' 136 136 40 40 1 43 'X' / +'F1' 136 136 40 40 1 43 'Y' / +'F1' 137 137 39 39 1 43 'X' / +'F1' 137 137 39 39 1 43 'Y' / +'F1' 138 138 38 38 1 43 'Y' / +'F1' 138 138 37 38 1 43 'X' / +'F1' 139 139 36 36 1 43 'X' / +'F1' 139 139 36 36 1 43 'Y' / +'F1' 140 140 35 35 1 43 'X' / +'F1' 140 140 35 35 1 43 'Y' / +'F1' 141 141 34 34 1 43 'X' / +'F1' 141 141 34 34 1 43 'Y' / +'F1' 142 144 33 33 1 43 'Y' / +'F1' 144 144 33 33 1 43 'X' / +'F1' 145 146 32 32 1 43 'Y' / +'F1' 146 146 32 32 1 43 'X' / +'F1' 147 147 31 31 1 43 'X' / +'F1' 147 147 31 31 1 43 'Y' / +'F1' 148 148 30 30 1 43 'X' / +'F1' 148 148 30 30 1 43 'Y' / +'F1' 149 149 29 29 1 43 'X' / +'F1' 149 149 29 29 1 43 'Y' / +'F1' 150 150 28 28 1 43 'X' / +'F1' 150 150 28 28 1 43 'Y' / +'F1' 151 151 27 27 1 43 'Y' / + +'F2' 123 123 62 62 43 43 'X-' / +'F2' 123 123 62 62 26 43 'Y-' / +'F2' 124 124 61 61 1 43 'X-' / +'F2' 124 124 61 61 1 43 'Y-' / +'F2' 125 125 60 60 1 43 'X-' / +'F2' 125 125 60 60 1 43 'Y-' / +'F2' 126 126 57 59 1 43 'X-' / +'F2' 125 125 56 56 1 43 'X-' / +'F2' 125 125 56 56 1 43 'Y' / +'F2' 125 125 56 56 1 43 'Y-' / +'F2' 126 126 54 55 1 43 'X-' / +'F2' 126 126 54 54 1 43 'Y-' / +'F2' 127 127 52 53 1 43 'X-' / +'F2' 127 127 52 52 1 43 'Y-' / +'F2' 128 128 51 51 1 43 'X-' / + +'F3' 121 121 39 39 38 43 'X-' / +'F3' 121 122 39 39 1 43 'Y-' / +'F3' 123 123 38 38 1 43 'X-' / +'F3' 123 124 38 38 1 43 'Y-' / +'F3' 125 125 37 37 1 43 'X-' / +'F3' 125 125 37 37 1 43 'Y-' / +'F3' 126 126 36 36 1 43 'X-' / +'F3' 126 127 36 36 1 43 'Y-' / +'F3' 128 128 34 35 1 43 'X-' / +'F3' 128 128 34 34 1 43 'Y-' / +'F3' 129 129 33 33 1 43 'X-' / +'F3' 129 129 33 33 1 43 'Y-' / +'F3' 130 130 32 32 1 43 'X-' / +'F3' 130 130 32 32 1 43 'Y-' / + / + + diff --git a/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault2.grdecl b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault2.grdecl new file mode 100644 index 0000000000..799634cc12 --- /dev/null +++ b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/fault2.grdecl @@ -0,0 +1,38 @@ +FAULTS +-- NAME IX1 IX2 IY1 IY2 IZ1 IZ2 FACE + +'F4' 125 128 32 32 1 43 'Y-' / +'F4' 128 128 32 32 1 43 'X' / +'F4' 123 124 31 31 1 43 'Y-' / +'F4' 124 124 31 31 1 43 'X' / +'F4' 122 122 30 30 1 43 'X' / +'F4' 122 122 30 30 1 43 'Y-' / +'F4' 121 121 29 29 1 43 'X' / +'F4' 121 121 29 29 1 43 'Y-' / +'F4' 118 120 28 28 1 43 'Y-' / +'F4' 120 120 28 28 1 43 'X' / +'F4' 117 117 27 27 1 43 'X' / +'F4' 117 117 27 27 1 43 'Y-' / + +'F5' 135 139 34 34 1 43 'Y-' / +'F5' 131 134 33 33 1 43 'Y-' / +'F5' 134 134 33 33 1 43 'X' / +'F5' 140 140 33 33 1 43 'X-' / +'F5' 140 141 33 33 1 43 'Y-' / +'F5' 142 142 33 33 1 30 'Y-' / +'F5' 130 130 32 32 1 43 'X' / + +'F6' 111 112 60 60 1 43 'Y-' / +'F6' 118 118 60 60 1 43 'Y-' / +'F6' 113 113 59 59 1 43 'X-' / +'F6' 113 117 59 59 1 43 'Y-' / +'F6' 117 117 59 59 1 43 'X' / + +'F7' 111 111 61 61 1 43 'X-' / +'F7' 111 116 61 61 1 43 'Y' / +'F7' 116 116 61 61 1 43 'X' / +'F7' 107 110 60 60 1 43 'Y' / +'F7' 117 117 60 60 1 43 'Y' / + + / + diff --git a/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/faults_nb.grdecl b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/faults_nb.grdecl new file mode 100644 index 0000000000..a50d9603b2 --- /dev/null +++ b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/FAULTS/faults_nb.grdecl @@ -0,0 +1,11 @@ +FAULTS + 'FY' 1 1 1 1 1 1 'Y' / + 'FY' 2 5 1 1 1 1 'Y' / + 'FY' 7 10 1 1 1 1 'Y' / + 'FY0' 1 3 1 1 1 1 'Y-' / + 'FYNY' 1 3 8 8 1 1 'Y' / + 'FX' 1 1 1 3 1 1 'X' / + 'FX0' 1 1 1 3 1 1 'X-' / + 'FXNX' 10 10 1 3 1 1 'X' / +/ + \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/test-data/local/ECLIPSE/grdecl-test/test.grdecl b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/grdecl-test/test.grdecl similarity index 100% rename from ThirdParty/Ert/devel/python/test/test-data/local/ECLIPSE/grdecl-test/test.grdecl rename to ThirdParty/Ert/devel/test-data/local/ECLIPSE/grdecl-test/test.grdecl diff --git a/ThirdParty/Ert/devel/python/test/test-data/local/ECLIPSE/grdecl-test/test.grdecl_dos b/ThirdParty/Ert/devel/test-data/local/ECLIPSE/grdecl-test/test.grdecl_dos similarity index 100% rename from ThirdParty/Ert/devel/python/test/test-data/local/ECLIPSE/grdecl-test/test.grdecl_dos rename to ThirdParty/Ert/devel/test-data/local/ECLIPSE/grdecl-test/test.grdecl_dos diff --git a/ThirdParty/Ert/devel/test-data/local/config/gen_data/REFCASE.SMSPEC b/ThirdParty/Ert/devel/test-data/local/config/gen_data/REFCASE.SMSPEC new file mode 100644 index 0000000000000000000000000000000000000000..04373c55f977a790111638ee1f1417755a4c1098 GIT binary patch literal 340 zcmbu5!3x4K42I(b71^OjkGcB>o-DR%k#*8$jNSFBuj(7=A9b+d(UgxrNq<6GA~MNm zu}PSS7Q3TOPy@F7XXp%_QM~rR3KZb-WeKGx0-|^3&NeGr)`e++f}vqzkkVDK|LM3qeMOVFn>VH E7w6J08vpN^c(Z+%X>S z-#gT6linxPTPD44sJC2t?D@Vzc_Z!$)=IC6dh4V&je73viXWe|sJB6S?ESq{dQZ@N z8>ROY^)^ZG8R~789{aqsMS3sLd|lFeiF#Y5_X_p4NpBwY66w80z3tL_gL>W4dy9HI zq{lwb@08wqG~X`ieL%h4());dJCKGn#L&^uC~;dwPyPzkEf#{nBIKH+!Y` z9nE(@dOuL_p!9yC-XZC+@9&4D_Z!XEC%r$YcSL%BQSYeo^6Y$wds~iPU-B)+ex*^w ze8_P-QrvShh`tD~-wqY`+DytJ^Dif)$IdUElwLcU@09f142>_Mf2ZwG@&0v~ltcPA zAU$@z?u_(0(R^p6=iY#Q5&d(sWAXlVnUq8NHz>U%aELb~y>1ggVt?kO=iV@U5#F#J zD&D^ylXA%Z9FZP7pPZLoFPg6)J@*9Xi|F5ZJ5;=XeJ16Q{#}qBJ3n8PUO$?zBt3VB z^hNY<)D9Kz-+)Ouq<Zi{>o`RaD4c)q$xIV9gD>0JpN;$4>B zlnEfQKi$^H_vdurkbGCAH)8@w%fkX1mNbi9OAd&B;^yUJG Date: Thu, 9 Oct 2014 20:36:27 +0200 Subject: [PATCH 04/21] Added support for fault face using IJK in addition to XYZ --- .../FileInterface/RifEclipseInputFileTools.cpp | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp b/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp index cb9264ea6a..8ccdbf24e8 100644 --- a/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp +++ b/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp @@ -850,12 +850,12 @@ bool RifEclipseInputFileTools::readFaultsAndParseIncludeStatementsRecursively(QF cvf::StructGridInterface::FaceEnum RifEclipseInputFileTools::faceEnumFromText(const QString& faceString) { - if (faceString == "X" ) return cvf::StructGridInterface::POS_I; - if (faceString == "X-") return cvf::StructGridInterface::NEG_I; - if (faceString == "Y" ) return cvf::StructGridInterface::POS_J; - if (faceString == "Y-") return cvf::StructGridInterface::NEG_J; - if (faceString == "Z" ) return cvf::StructGridInterface::POS_K; - if (faceString == "Z-") return cvf::StructGridInterface::NEG_K; + if (faceString == "X" || faceString == "I" ) return cvf::StructGridInterface::POS_I; + if (faceString == "X-" || faceString == "I-") return cvf::StructGridInterface::NEG_I; + if (faceString == "Y" || faceString == "J" ) return cvf::StructGridInterface::POS_J; + if (faceString == "Y-" || faceString == "J-") return cvf::StructGridInterface::NEG_J; + if (faceString == "Z" || faceString == "K" ) return cvf::StructGridInterface::POS_K; + if (faceString == "Z-" || faceString == "K-") return cvf::StructGridInterface::NEG_K; return cvf::StructGridInterface::NO_FACE; } From a5e4e756af98e8373ec1b996c554ed55ab2bf4eb Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Fri, 24 Oct 2014 11:19:54 +0200 Subject: [PATCH 05/21] Updated ERT, now possible to read simplified MSW Updated ERT to 3ac60303aa2dc58aed9420a24d9a881fec32076b --- .../RifEclipseRestartDataAccess.h | 2 +- .../RifEclipseRestartFilesetAccess.cpp | 4 +- .../RifEclipseRestartFilesetAccess.h | 2 +- .../RifEclipseUnifiedRestartFileAccess.cpp | 4 +- .../RifEclipseUnifiedRestartFileAccess.h | 2 +- .../FileInterface/RifReaderEclipseOutput.cpp | 12 +- .../FileInterface/RifReaderEclipseOutput.h | 2 +- .../Ert/devel/libanalysis/src/sqrt_enkf.c | 5 +- .../libecl/applications/grid_dump_ascii.c | 2 +- .../Ert/devel/libecl/applications/load_test.c | 116 ++- .../libecl/include/ert/ecl/ecl_kw_magic.h | 8 +- .../Ert/devel/libecl/src/ecl_coarse_cell.c | 4 +- ThirdParty/Ert/devel/libecl/src/ecl_grid.c | 48 +- ThirdParty/Ert/devel/libecl/tests/ecl_dualp.c | 4 +- .../libecl_well/applications/segment_info.c | 6 +- .../libecl_well/applications/well_CF_dump.c | 2 +- .../include/ert/ecl_well/well_info.h | 8 +- .../ert/ecl_well/well_segment_collection.h | 4 +- .../include/ert/ecl_well/well_state.h | 8 +- .../Ert/devel/libecl_well/src/well_info.c | 18 +- .../libecl_well/src/well_segment_collection.c | 27 +- .../Ert/devel/libecl_well/src/well_state.c | 79 +- .../devel/libecl_well/tests/well_lgr_load.c | 2 +- .../tests/well_segment_branch_conn_load.c | 4 +- .../libecl_well/tests/well_segment_load.c | 10 +- .../devel/libecl_well/tests/well_state_load.c | 5 +- .../tests/well_state_load_missing_RSEG.c | 3 +- .../Ert/devel/libecl_well/tests/well_ts.c | 4 +- .../applications/ert_tui/enkf_tui_init.c | 2 +- .../applications/ert_tui/enkf_tui_run.c | 30 +- .../devel/libenkf/include/ert/enkf/enkf_fs.h | 2 +- .../libenkf/include/ert/enkf/enkf_main.h | 37 +- .../libenkf/include/ert/enkf/enkf_state.h | 49 +- .../libenkf/include/ert/enkf/enkf_types.h | 4 +- .../include/ert/enkf/ert_run_context.h | 95 +++ .../include/ert/enkf/ert_workflow_list.h | 2 +- .../devel/libenkf/include/ert/enkf/gen_data.h | 1 + .../devel/libenkf/include/ert/enkf/gen_kw.h | 2 + .../libenkf/include/ert/enkf/qc_module.h | 2 +- .../devel/libenkf/include/ert/enkf/run_arg.h | 89 +++ .../libenkf/include/ert/enkf/runpath_list.h | 7 +- .../Ert/devel/libenkf/src/CMakeLists.txt | 8 +- .../Ert/devel/libenkf/src/ecl_refcase_list.c | 7 +- ThirdParty/Ert/devel/libenkf/src/enkf_fs.c | 7 +- ThirdParty/Ert/devel/libenkf/src/enkf_main.c | 586 +++++++++------ .../Ert/devel/libenkf/src/enkf_main_jobs.c | 29 +- .../devel/libenkf/src/enkf_main_manage_fs.c | 9 +- ThirdParty/Ert/devel/libenkf/src/enkf_state.c | 675 +++++------------- .../Ert/devel/libenkf/src/ert_run_context.c | 363 ++++++++++ .../Ert/devel/libenkf/src/ert_workflow_list.c | 4 +- ThirdParty/Ert/devel/libenkf/src/gen_data.c | 114 +-- ThirdParty/Ert/devel/libenkf/src/gen_kw.c | 27 +- ThirdParty/Ert/devel/libenkf/src/qc_module.c | 23 +- ThirdParty/Ert/devel/libenkf/src/run_arg.c | 284 ++++++++ .../Ert/devel/libenkf/src/runpath_list.c | 19 +- ThirdParty/Ert/devel/libenkf/src/time_map.c | 2 +- ThirdParty/Ert/devel/libenkf/src/trans_func.c | 12 +- .../Ert/devel/libenkf/tests/CMakeLists.txt | 22 +- .../libenkf/tests/enkf_ert_run_context.c | 104 +++ .../tests/enkf_export_inactive_cells.c | 19 +- .../libenkf/tests/enkf_forward_init_FIELD.c | 30 +- .../libenkf/tests/enkf_forward_init_GEN_KW.c | 30 +- .../tests/enkf_forward_init_GEN_PARAM.c | 31 +- .../libenkf/tests/enkf_forward_init_SURFACE.c | 31 +- .../tests/enkf_forward_init_transform.c | 21 +- ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c | 12 +- .../libenkf/tests/enkf_gen_data_config.c | 42 ++ .../Ert/devel/libenkf/tests/enkf_main.c | 2 +- .../Ert/devel/libenkf/tests/enkf_run_arg.c | 110 +++ .../devel/libenkf/tests/enkf_runpath_list.c | 23 +- .../tests/enkf_state_manual_load_test.c | 81 +-- .../tests/enkf_state_report_step_compatible.c | 28 +- .../libenkf/tests/enkf_state_runpath_test.c | 106 --- .../tests/enkf_state_skip_summary_load_test.c | 35 +- .../Ert/devel/libenkf/tests/gen_kw_test.c | 17 +- .../include/ert/util/lookup_table.h | 28 +- .../libert_util/include/ert/util/subst_list.h | 2 +- .../include/ert/util/type_macros.h | 4 +- .../Ert/devel/libert_util/src/lookup_table.c | 42 +- .../Ert/devel/libert_util/src/subst_list.c | 2 +- .../include/ert/job_queue/job_queue.h | 2 + .../include/ert/job_queue/job_queue_manager.h | 41 ++ .../include/ert/job_queue/workflow_job.h | 4 +- .../Ert/devel/libjob_queue/src/CMakeLists.txt | 4 +- .../Ert/devel/libjob_queue/src/job_queue.c | 51 +- .../libjob_queue/src/job_queue_manager.c | 68 ++ .../Ert/devel/libjob_queue/src/workflow_job.c | 4 +- .../devel/libjob_queue/tests/CMakeLists.txt | 4 + .../libjob_queue/tests/job_lsf_submit_test.c | 24 +- .../libjob_queue/tests/job_queue_manager.c | 48 ++ .../python/python/ert/cwrap/basecclass.py | 11 +- .../devel/python/python/ert/ecl/__init__.py | 2 +- .../Ert/devel/python/python/ert/ecl/ecl_kw.py | 3 + .../devel/python/python/ert/ecl/ecl_sum.py | 25 +- .../Ert/devel/python/python/ert/ecl/fortio.py | 18 + .../python/python/ert/enkf/CMakeLists.txt | 3 +- .../devel/python/python/ert/enkf/__init__.py | 6 +- .../python/ert/enkf/data/CMakeLists.txt | 1 + .../python/python/ert/enkf/data/__init__.py | 6 +- .../python/python/ert/enkf/data/enkf_node.py | 17 +- .../python/ert/enkf/{ => data}/gen_data.py | 12 +- .../python/python/ert/enkf/data/gen_kw.py | 38 +- .../python/ert/enkf/data/gen_kw_config.py | 11 +- .../python/python/ert/enkf/ecl_config.py | 9 +- .../devel/python/python/ert/enkf/enkf_fs.py | 14 +- .../devel/python/python/ert/enkf/enkf_main.py | 20 + .../python/python/ert/enkf/enkf_state.py | 43 +- .../python/python/ert/enkf/enums/__init__.py | 6 +- .../python/ert/enkf/enums/enkf_run_enum.py | 14 +- .../python/python/ert/enkf/ert_run_context.py | 71 ++ .../devel/python/python/ert/enkf/run_arg.py | 47 ++ .../python/ert/job_queue/CMakeLists.txt | 1 + .../python/python/ert/job_queue/__init__.py | 1 + .../python/ert/job_queue/job_queue_manager.py | 50 ++ .../python/python/ert/server/CMakeLists.txt | 1 + .../python/python/ert/server/__init__.py | 3 +- .../python/python/ert/server/ert_server.py | 102 ++- .../python/python/ert/server/ert_socket.py | 3 +- .../python/python/ert/server/run_context.py | 47 ++ .../python/python/ert/test/ert_test_runner.py | 30 +- .../devel/python/python/ert/test/test_area.py | 9 + .../python/python/ert/util/bool_vector.py | 1 + .../python/python/ert/util/double_vector.py | 1 + .../python/python/ert/util/int_vector.py | 1 + .../python/python/ert/util/lookup_table.py | 83 ++- .../python/python/ert/util/time_vector.py | 1 + .../python/python/ert/util/vector_template.py | 12 + .../devel/python/python/ert/well/well_info.py | 16 +- .../python/python/ert/well/well_state.py | 5 + .../connectors/run/sensitivity_study.py | 22 +- .../simulation/sensitivity_study_panel.py | 2 +- .../Ert/devel/python/test/CMakeLists.txt | 14 + .../python/test/ert_tests/ecl/test_fortio.py | 20 +- .../test/ert_tests/enkf/data/test_gen_data.py | 35 + .../test/ert_tests/enkf/data/test_gen_kw.py | 98 ++- .../python/test/ert_tests/enkf/test_enkf.py | 48 +- .../test/ert_tests/enkf/test_enkf_fs.py | 10 +- .../test/ert_tests/enkf/test_enkf_library.py | 2 +- .../test/ert_tests/enkf/test_run_arg.py | 29 + .../test/ert_tests/server/test_server.py | 27 +- .../test/ert_tests/util/test_lookup_table.py | 74 +- .../test/ert_tests/util/test_vectors.py | 28 + .../test/ert_tests/util/test_work_area.py | 46 ++ .../test/ert_tests/well/test_ecl_well.py | 53 +- 144 files changed, 3536 insertions(+), 1674 deletions(-) create mode 100644 ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_run_context.h create mode 100644 ThirdParty/Ert/devel/libenkf/include/ert/enkf/run_arg.h create mode 100644 ThirdParty/Ert/devel/libenkf/src/ert_run_context.c create mode 100644 ThirdParty/Ert/devel/libenkf/src/run_arg.c create mode 100644 ThirdParty/Ert/devel/libenkf/tests/enkf_ert_run_context.c create mode 100644 ThirdParty/Ert/devel/libenkf/tests/enkf_run_arg.c delete mode 100644 ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c create mode 100644 ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue_manager.h create mode 100644 ThirdParty/Ert/devel/libjob_queue/src/job_queue_manager.c create mode 100644 ThirdParty/Ert/devel/libjob_queue/tests/job_queue_manager.c rename ThirdParty/Ert/devel/python/python/ert/enkf/{ => data}/gen_data.py (69%) create mode 100644 ThirdParty/Ert/devel/python/python/ert/enkf/ert_run_context.py create mode 100644 ThirdParty/Ert/devel/python/python/ert/enkf/run_arg.py create mode 100644 ThirdParty/Ert/devel/python/python/ert/job_queue/job_queue_manager.py create mode 100644 ThirdParty/Ert/devel/python/python/ert/server/run_context.py create mode 100644 ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data.py create mode 100644 ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_run_arg.py create mode 100644 ThirdParty/Ert/devel/python/test/ert_tests/util/test_work_area.py diff --git a/ApplicationCode/FileInterface/RifEclipseRestartDataAccess.h b/ApplicationCode/FileInterface/RifEclipseRestartDataAccess.h index 81bfc31819..9edaa96a01 100644 --- a/ApplicationCode/FileInterface/RifEclipseRestartDataAccess.h +++ b/ApplicationCode/FileInterface/RifEclipseRestartDataAccess.h @@ -55,6 +55,6 @@ class RifEclipseRestartDataAccess : public cvf::Object virtual void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts) = 0; virtual bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values) = 0; - virtual void readWellData(well_info_type * well_info) = 0; + virtual void readWellData(well_info_type * well_info, bool importCompleteMswData) = 0; virtual int readUnitsType() = 0; }; diff --git a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp index ff838c57ff..35da9d4316 100644 --- a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp +++ b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp @@ -209,7 +209,7 @@ bool RifEclipseRestartFilesetAccess::results(const QString& resultName, size_t t //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- -void RifEclipseRestartFilesetAccess::readWellData(well_info_type* well_info) +void RifEclipseRestartFilesetAccess::readWellData(well_info_type* well_info, bool importCompleteMswData) { if (!well_info) return; @@ -221,7 +221,7 @@ void RifEclipseRestartFilesetAccess::readWellData(well_info_type* well_info) int reportNumber = ecl_util_filename_report_nr(fileName); if(reportNumber != -1) { - well_info_add_wells(well_info, m_ecl_files[i], reportNumber); + well_info_add_wells(well_info, m_ecl_files[i], reportNumber, importCompleteMswData); } } } diff --git a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h index 3bcbee647d..36ccb3356f 100644 --- a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h +++ b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h @@ -48,7 +48,7 @@ class RifEclipseRestartFilesetAccess : public RifEclipseRestartDataAccess void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts); bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values); - virtual void readWellData(well_info_type* well_info); + virtual void readWellData(well_info_type* well_info, bool importCompleteMswData); virtual int readUnitsType(); private: diff --git a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp index 43159f8f56..5ef395ed32 100644 --- a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp +++ b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp @@ -146,13 +146,13 @@ bool RifEclipseUnifiedRestartFileAccess::results(const QString& resultName, size //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- -void RifEclipseUnifiedRestartFileAccess::readWellData(well_info_type* well_info) +void RifEclipseUnifiedRestartFileAccess::readWellData(well_info_type* well_info, bool importCompleteMswData) { if (!well_info) return; if (openFile()) { - well_info_add_UNRST_wells(well_info, m_ecl_file); + well_info_add_UNRST_wells(well_info, m_ecl_file, importCompleteMswData); } } diff --git a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h index fd2e85bee8..26e7824959 100644 --- a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h +++ b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h @@ -49,7 +49,7 @@ class RifEclipseUnifiedRestartFileAccess : public RifEclipseRestartDataAccess void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts); bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values); - virtual void readWellData(well_info_type * well_info); + virtual void readWellData(well_info_type * well_info, bool importCompleteMswData); virtual int readUnitsType(); private: diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp index 8c9a26c448..e98b187f4b 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp @@ -453,10 +453,8 @@ bool RifReaderEclipseOutput::open(const QString& fileName, RigCaseData* eclipseC progInfo.setNextProgressIncrement(8); progInfo.setProgressDescription("Reading Well information"); - if (isSimulationWellDataEnabled()) - { - readWellCells(mainEclGrid); - } + + readWellCells(mainEclGrid, isSimulationWellDataEnabled()); progInfo.setProgressDescription("Releasing reader memory"); ecl_grid_free( mainEclGrid ); @@ -1057,7 +1055,7 @@ void propagatePosContribDownwards(std::mapreadWellData(ert_well_info); + m_dynamicResultsAccess->readWellData(ert_well_info, importCompleteMswData); RigMainGrid* mainGrid = m_eclipseCase->mainGrid(); std::vector grids; @@ -1129,7 +1127,7 @@ void RifReaderEclipseOutput::readWellCells(const ecl_grid_type* mainEclGrid) wellResFrame.m_isOpen = well_state_is_open( ert_well_state ); - if (well_state_is_MSW(ert_well_state)) + if (importCompleteMswData && well_state_is_MSW(ert_well_state)) { wellResults->setMultiSegmentWell(true); diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.h b/ApplicationCode/FileInterface/RifReaderEclipseOutput.h index 5ee457471f..b93d19c308 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.h +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.h @@ -60,7 +60,7 @@ class RifReaderEclipseOutput : public RifReaderInterface private: bool readActiveCellInfo(); void buildMetaData(); - void readWellCells(const ecl_grid_type* mainEclGrid); + void readWellCells(const ecl_grid_type* mainEclGrid, bool importCompleteMswData); std::string ertGridName( size_t gridNr ); diff --git a/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c b/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c index e5a991bb70..6983541cea 100644 --- a/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c +++ b/ThirdParty/Ert/devel/libanalysis/src/sqrt_enkf.c @@ -142,7 +142,10 @@ long sqrt_enkf_get_options( void * arg , long flag ) { } -void sqrt_enkf_init_update( void * arg , + +// Called from analysis_module.c: analysis_module_init_update() +void sqrt_enkf_init_update( void * arg , + const bool_vector_type * ens_mask, const matrix_type * S , const matrix_type * R , const matrix_type * dObs , diff --git a/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c b/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c index be11b7da79..e9e05964be 100644 --- a/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c +++ b/ThirdParty/Ert/devel/libecl/applications/grid_dump_ascii.c @@ -44,7 +44,7 @@ int main(int argc, char ** argv) { stream = stdout; ecl_grid = ecl_grid_alloc(grid_file); - ecl_grid_dump_ascii( ecl_grid , true , stream ); + ecl_grid_dump_ascii( ecl_grid , false , stream ); if (output_file != NULL) fclose( stream ); diff --git a/ThirdParty/Ert/devel/libecl/applications/load_test.c b/ThirdParty/Ert/devel/libecl/applications/load_test.c index a8b04122ed..9a02887de2 100644 --- a/ThirdParty/Ert/devel/libecl/applications/load_test.c +++ b/ThirdParty/Ert/devel/libecl/applications/load_test.c @@ -20,87 +20,65 @@ #include #include - #include #include #include - void test_case( const char * base , bool load_all) { - timer_type * ti = timer_alloc(false); - timer_type * tr = timer_alloc(false); - timer_type * tg = timer_alloc(false); - - char * grid_file = NULL; - char * init_file = NULL; - char * restart_file = NULL; - -// grid_file = ecl_util_alloc_filename( NULL , base , ECL_EGRID_FILE , false , 0 ); -// init_file = ecl_util_alloc_filename( NULL , base , ECL_INIT_FILE , false , 0 ); - restart_file = ecl_util_alloc_filename( NULL , base , ECL_UNIFIED_RESTART_FILE , false , 0 ); - - - timer_start( tg ); - if (grid_file) - { - ecl_grid_type * grid = NULL; - grid = ecl_grid_alloc(grid_file ); - ecl_grid_free( grid ); - } - timer_stop( tg ); - - timer_start( ti ); - if (init_file) - { - ecl_file_type * init = NULL; - init = ecl_file_open( init_file , 0); - if (load_all) - { - ecl_file_load_all( init ); - } - ecl_file_close( init ); - } - timer_stop( ti ); - - timer_start( tr ); - if (restart_file) - { - ecl_file_type * restart = NULL; - restart = ecl_file_open( restart_file , 0); - if (load_all) - { - ecl_file_load_all( restart ); - } - ecl_file_close( restart ); - } - timer_stop( tr ); - - - printf("%-64s Restart:%8.4f Grid:%8.4f Init:%8.4f \n", - base, - timer_get_total_time( tr ), - timer_get_total_time( tg ), - timer_get_total_time( ti )); - - timer_free( tr ); - timer_free( ti ); - timer_free( tg ); - free( grid_file ); - free( init_file ); - free( restart_file ); + timer_type * ti = timer_alloc(false); + timer_type * tr = timer_alloc(false); + timer_type * tg = timer_alloc(false); + + char * grid_file = ecl_util_alloc_filename( NULL , base , ECL_EGRID_FILE , false , 0 ); + char * init_file = ecl_util_alloc_filename( NULL , base , ECL_INIT_FILE , false , 0 ); + char * restart_file = ecl_util_alloc_filename( NULL , base , ECL_UNIFIED_RESTART_FILE , false , 0 ); + + ecl_grid_type * grid; + ecl_file_type * restart; + ecl_file_type * init; + + + timer_start( tg ); + grid = ecl_grid_alloc(grid_file ); + timer_stop( tg ); + + timer_start( ti ); + init = ecl_file_open( init_file , 0); + if (load_all) + ecl_file_load_all( init ); + timer_stop( ti ); + + timer_start( tr ); + restart = ecl_file_open( restart_file , 0); + if (load_all) + ecl_file_load_all( restart ); + timer_stop( tr ); + + + printf("%-64s Restart:%8.4f Grid:%8.4f Init:%8.4f \n", + base, + timer_get_total_time( tr ), + timer_get_total_time( tg ), + timer_get_total_time( ti )); + + timer_free( tr ); + timer_free( ti ); + timer_free( tg ); + ecl_file_close( init ); + ecl_file_close( restart ); + ecl_grid_free( grid ); + free( grid_file ); + free( init_file ); + free( restart_file ); } int main(int argc, char ** argv) { - bool load_all = false; + bool load_all = true; int i; - -// system("pause"); - for (i=1; i < argc; i++) test_case( argv[i] , load_all); - - system("pause"); + } diff --git a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw_magic.h b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw_magic.h index 430765c5e6..200e1b7df6 100644 --- a/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw_magic.h +++ b/ThirdParty/Ert/devel/libecl/include/ert/ecl/ecl_kw_magic.h @@ -345,10 +345,10 @@ extern "C" { #define FILEHEAD_DUAL_PERMEABILITY 2 -#define INACTIVE 0 -#define ACTIVE_MATRIX 1 -#define ACTIVE ACTIVE_MATRIX -#define ACTIVE_FRACTURE 2 +#define CELL_NOT_ACTIVE 0 +#define CELL_ACTIVE_MATRIX 1 +#define CELL_ACTIVE CELL_ACTIVE_MATRIX +#define CELL_ACTIVE_FRACTURE 2 diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c b/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c index 97a59fa7a6..e279f0c73b 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_coarse_cell.c @@ -287,14 +287,14 @@ const int * ecl_coarse_cell_get_box_ptr( const ecl_coarse_cell_type * coarse_cel /*****************************************************************/ void ecl_coarse_cell_update_index( ecl_coarse_cell_type * coarse_cell , int global_index , int * active_index , int * active_fracture_index , int active_value) { - if (active_value & ACTIVE_MATRIX) { + if (active_value & CELL_ACTIVE_MATRIX) { if (coarse_cell->active_index == -1) { coarse_cell->active_index = *active_index; (*active_index) += 1; } } - if (active_value & ACTIVE_FRACTURE) { + if (active_value & CELL_ACTIVE_FRACTURE) { if (coarse_cell->active_fracture_index == -1) { coarse_cell->active_fracture_index = *active_fracture_index; (*active_fracture_index) += 1; diff --git a/ThirdParty/Ert/devel/libecl/src/ecl_grid.c b/ThirdParty/Ert/devel/libecl/src/ecl_grid.c index 938ee0d588..10941aaad0 100644 --- a/ThirdParty/Ert/devel/libecl/src/ecl_grid.c +++ b/ThirdParty/Ert/devel/libecl/src/ecl_grid.c @@ -714,10 +714,10 @@ static void ecl_cell_fwrite_GRID( const ecl_grid_type * grid , const ecl_cell_ty ecl_kw_iset_int( coords_kw , 4 , 0); if (fracture_cell) { - if (cell->active & ACTIVE_FRACTURE) + if (cell->active & CELL_ACTIVE_FRACTURE) ecl_kw_iset_int( coords_kw , 4 , 1); } else { - if (cell->active & ACTIVE_MATRIX) + if (cell->active & CELL_ACTIVE_MATRIX) ecl_kw_iset_int( coords_kw , 4 , 1); } @@ -903,7 +903,7 @@ static void ecl_cell_taint_cell( ecl_cell_type * cell ) { /* Second heuristic to invalidate cells. */ - if (cell->active == INACTIVE) { + if (cell->active == CELL_NOT_ACTIVE) { if (!GET_CELL_FLAG(cell , CELL_FLAG_TAINTED)) { const point_type p0 = cell->corner_list[0]; int cell_index = 1; @@ -939,7 +939,7 @@ static void ecl_cell_taint_cell( ecl_cell_type * cell ) { */ static void ecl_cell_init( ecl_cell_type * cell , bool init_valid) { - cell->active = INACTIVE; + cell->active = CELL_NOT_ACTIVE; cell->lgr = NULL; cell->host_cell = HOST_CELL_NONE; cell->coarse_group = COARSE_GROUP_NONE; @@ -1205,7 +1205,7 @@ static void ecl_cell_init_regular( ecl_cell_type * cell , const double * offset if (actnum != NULL) cell->active = actnum[global_index]; else - cell->active = ACTIVE; + cell->active = CELL_ACTIVE; } /* end of cell implementation */ @@ -1375,7 +1375,7 @@ static void ecl_grid_set_cell_EGRID(ecl_grid_type * ecl_grid , int i, int j , in for dual porosity models it can also be 2 and 3. */ if (actnum == NULL) - cell->active = ACTIVE; + cell->active = CELL_ACTIVE; else cell->active = actnum[global_index]; @@ -1392,7 +1392,7 @@ static void ecl_grid_set_cell_GRID(ecl_grid_type * ecl_grid , int coords_size , int global_index; ecl_cell_type * cell; bool matrix_cell = true; - int active_value = ACTIVE_MATRIX; + int active_value = CELL_ACTIVE_MATRIX; /* This is the rather hysterical treatment of dual porosity in GRID @@ -1405,7 +1405,7 @@ static void ecl_grid_set_cell_GRID(ecl_grid_type * ecl_grid , int coords_size , if (k >= ecl_grid->nz) { k -= ecl_grid->nz; matrix_cell = false; - active_value = ACTIVE_FRACTURE; + active_value = CELL_ACTIVE_FRACTURE; } @@ -1506,14 +1506,14 @@ static void ecl_grid_realloc_index_map(ecl_grid_type * ecl_grid) { { ecl_grid->index_map = util_realloc(ecl_grid->index_map , ecl_grid->size * sizeof * ecl_grid->index_map ); ecl_grid->inv_index_map = util_realloc(ecl_grid->inv_index_map , ecl_grid->total_active * sizeof * ecl_grid->inv_index_map ); - ecl_grid_init_index_map__( ecl_grid , ecl_grid->index_map , ecl_grid->inv_index_map , ACTIVE_MATRIX , MATRIX_INDEX); + ecl_grid_init_index_map__( ecl_grid , ecl_grid->index_map , ecl_grid->inv_index_map , CELL_ACTIVE_MATRIX , MATRIX_INDEX); } /* Create the inverse mapping for the fractures. */ if (ecl_grid->dualp_flag != FILEHEAD_SINGLE_POROSITY) { ecl_grid->fracture_index_map = util_realloc(ecl_grid->fracture_index_map , ecl_grid->size * sizeof * ecl_grid->fracture_index_map ); ecl_grid->inv_fracture_index_map = util_realloc(ecl_grid->inv_fracture_index_map , ecl_grid->total_active_fracture * sizeof * ecl_grid->inv_fracture_index_map ); - ecl_grid_init_index_map__( ecl_grid , ecl_grid->fracture_index_map , ecl_grid->inv_fracture_index_map , ACTIVE_FRACTURE , FRACTURE_INDEX); + ecl_grid_init_index_map__( ecl_grid , ecl_grid->fracture_index_map , ecl_grid->inv_fracture_index_map , CELL_ACTIVE_FRACTURE , FRACTURE_INDEX); } @@ -1531,10 +1531,10 @@ static void ecl_grid_realloc_index_map(ecl_grid_type * ecl_grid) { int active_index = ecl_coarse_cell_get_active_index( coarse_cell ); int active_fracture_index = ecl_coarse_cell_get_active_fracture_index( coarse_cell ); - if (active_value & ACTIVE_MATRIX) + if (active_value & CELL_ACTIVE_MATRIX) ecl_grid->inv_index_map[ active_index ] = global_index; // The active -> global mapping point to one "random" cell in the coarse group - if (active_value & ACTIVE_FRACTURE) + if (active_value & CELL_ACTIVE_FRACTURE) ecl_grid->inv_fracture_index_map[ active_fracture_index ] = global_index; { @@ -1544,10 +1544,10 @@ static void ecl_grid_realloc_index_map(ecl_grid_type * ecl_grid) { for (ic =0; ic < coarse_size; ic++) { int gi = int_vector_iget( global_index_list , ic ); - if (active_value & ACTIVE_MATRIX) + if (active_value & CELL_ACTIVE_MATRIX) ecl_grid->index_map[ gi ] = active_index; // All the cells in the coarse group point to the same active index. - if (active_value & ACTIVE_FRACTURE) + if (active_value & CELL_ACTIVE_FRACTURE) ecl_grid->fracture_index_map[ gi ] = active_fracture_index; } } @@ -1576,7 +1576,7 @@ static void ecl_grid_set_active_index(ecl_grid_type * ecl_grid) { for (global_index = 0; global_index < ecl_grid->size; global_index++) { ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index); - if (cell->active & ACTIVE_MATRIX) { + if (cell->active & CELL_ACTIVE_MATRIX) { cell->active_index[MATRIX_INDEX] = active_index; active_index++; } @@ -1586,7 +1586,7 @@ static void ecl_grid_set_active_index(ecl_grid_type * ecl_grid) { if (ecl_grid->dualp_flag != FILEHEAD_SINGLE_POROSITY) { for (global_index = 0; global_index < ecl_grid->size; global_index++) { ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index); - if (cell->active & ACTIVE_FRACTURE) { + if (cell->active & CELL_ACTIVE_FRACTURE) { cell->active_index[FRACTURE_INDEX] = active_fracture_index; active_fracture_index++; } @@ -1601,15 +1601,15 @@ static void ecl_grid_set_active_index(ecl_grid_type * ecl_grid) { */ for (global_index = 0; global_index < ecl_grid->size; global_index++) { ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index); - if (cell->active != INACTIVE) { + if (cell->active != CELL_NOT_ACTIVE) { if (cell->coarse_group == COARSE_GROUP_NONE) { - if (cell->active & ACTIVE_MATRIX) { + if (cell->active & CELL_ACTIVE_MATRIX) { cell->active_index[MATRIX_INDEX] = active_index; active_index++; } - if (cell->active & ACTIVE_FRACTURE) { + if (cell->active & CELL_ACTIVE_FRACTURE) { cell->active_index[FRACTURE_INDEX] = active_fracture_index; active_fracture_index++; } @@ -1643,11 +1643,11 @@ static void ecl_grid_set_active_index(ecl_grid_type * ecl_grid) { { ecl_cell_type * cell = ecl_grid_get_cell( ecl_grid , global_index ); - if (cell_active_value & ACTIVE_MATRIX) + if (cell_active_value & CELL_ACTIVE_MATRIX) cell->active_index[MATRIX_INDEX] = cell_active_index; /* Coarse cell and dual porosity - that is probably close to zero measure. */ - if (cell_active_value & ACTIVE_FRACTURE) { + if (cell_active_value & CELL_ACTIVE_FRACTURE) { int cell_active_fracture_index = ecl_coarse_cell_get_active_fracture_index( coarse_cell ); cell->active_index[FRACTURE_INDEX] = cell_active_fracture_index; } @@ -2853,7 +2853,7 @@ ecl_grid_type * ecl_grid_alloc_dxv_dyv_dzv_depthz( int nx, int ny , int nz , con if (actnum) cell->active = actnum[global_index]; else - cell->active = ACTIVE; + cell->active = CELL_ACTIVE; } } } @@ -2917,7 +2917,7 @@ ecl_grid_type * ecl_grid_alloc_dx_dy_dz_tops( int nx, int ny , int nz , const do if (actnum != NULL) cell->active = actnum[g]; else - cell->active = ACTIVE; + cell->active = CELL_ACTIVE; } } } @@ -5488,7 +5488,7 @@ void ecl_grid_init_actnum_data( const ecl_grid_type * grid , int * actnum ) { const int * index_ptr = ecl_coarse_cell_get_index_ptr( coarse_cell ); int j; for (j=0; j < group_size; j++) - actnum[index_ptr[j]] = INACTIVE; + actnum[index_ptr[j]] = CELL_NOT_ACTIVE; } /* 2: Explicitly pick up the active cells from the coarse group diff --git a/ThirdParty/Ert/devel/libecl/tests/ecl_dualp.c b/ThirdParty/Ert/devel/libecl/tests/ecl_dualp.c index a4014339ad..fce022e675 100644 --- a/ThirdParty/Ert/devel/libecl/tests/ecl_dualp.c +++ b/ThirdParty/Ert/devel/libecl/tests/ecl_dualp.c @@ -52,13 +52,13 @@ int main(int argc , char ** argv) { int fracture_index = 0; for (gi = 0; gi < ecl_grid_get_global_size( ecl_grid ); gi++) { - if (ecl_kw_iget_int( actnum , gi ) & ACTIVE_MATRIX) { + if (ecl_kw_iget_int( actnum , gi ) & CELL_ACTIVE_MATRIX) { test_assert_int_equal( ecl_grid_get_active_index1( ecl_grid , gi ) , matrix_index); test_assert_int_equal( ecl_grid_get_global_index1A( ecl_grid , matrix_index ) , gi); matrix_index++; } - if (ecl_kw_iget_int( actnum , gi ) & ACTIVE_FRACTURE) { + if (ecl_kw_iget_int( actnum , gi ) & CELL_ACTIVE_FRACTURE) { test_assert_int_equal( ecl_grid_get_active_fracture_index1( ecl_grid , gi ) , fracture_index); test_assert_int_equal( ecl_grid_get_global_index1F( ecl_grid , fracture_index ) , gi); fracture_index++; diff --git a/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c b/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c index 6a776b35da..6c670941c1 100644 --- a/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c +++ b/ThirdParty/Ert/devel/libecl_well/applications/segment_info.c @@ -17,7 +17,7 @@ */ #include #include -//#include +#include #include #include @@ -57,8 +57,10 @@ int main(int argc , char ** argv) { { well_conn_collection_type * connections = well_conn_collection_alloc(); well_segment_collection_type * segments = well_segment_collection_alloc(); + bool load_segment_information = true; + bool is_MSW_well = false; - if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head )) { + if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head , load_segment_information , &is_MSW_well)) { well_branch_collection_type * branches = well_branch_collection_alloc(); well_conn_collection_load_from_kw( connections , iwel_kw , icon_kw , scon_kw , well_nr , rst_head); diff --git a/ThirdParty/Ert/devel/libecl_well/applications/well_CF_dump.c b/ThirdParty/Ert/devel/libecl_well/applications/well_CF_dump.c index 674f7e3cbe..433aab6559 100644 --- a/ThirdParty/Ert/devel/libecl_well/applications/well_CF_dump.c +++ b/ThirdParty/Ert/devel/libecl_well/applications/well_CF_dump.c @@ -29,7 +29,7 @@ int main( int argc , char ** argv ) { ecl_grid_type * grid = ecl_grid_alloc( grid_file ); well_info_type * well_info = well_info_alloc( grid ); - well_info_load_rstfile( well_info , rst_file ); + well_info_load_rstfile( well_info , rst_file , true ); { int iw; int ic; diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h index 33e17a55ee..1f45f1f10d 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_info.h @@ -32,10 +32,10 @@ extern "C" { typedef struct well_info_struct well_info_type; well_info_type * well_info_alloc(const ecl_grid_type * grid); - void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst_file); - void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr ); - void well_info_load_rstfile( well_info_type * well_info , const char * filename); - void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * rst_file); + void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst_file, bool load_segment_information); + void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr , bool load_segment_information); + void well_info_load_rstfile( well_info_type * well_info , const char * filename, bool load_segment_information); + void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * rst_file , bool load_segment_information); void well_info_free( well_info_type * well_info ); well_ts_type * well_info_get_ts( const well_info_type * well_info , const char *well_name); diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h index 5655a19c1f..22b9a287f0 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_segment_collection.h @@ -47,7 +47,9 @@ extern "C" { const ecl_kw_type * iwel_kw , const ecl_kw_type * iseg_kw , const well_rseg_loader_type * rseg_loader , - const ecl_rsthead_type * rst_head); + const ecl_rsthead_type * rst_head, + bool load_segment_information , bool * is_MSW_well); + void well_segment_collection_link(const well_segment_collection_type * segment_collection); void well_segment_collection_add_connections(well_segment_collection_type * segment_collection , const char * grid_name , diff --git a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h index ac144b52cd..1a68edd76b 100644 --- a/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h +++ b/ThirdParty/Ert/devel/libecl_well/include/ert/ecl_well/well_state.h @@ -41,7 +41,7 @@ extern "C" { typedef struct well_state_struct well_state_type; well_state_type * well_state_alloc(const char * well_name , int global_well_nr , bool open, well_type_enum type , int report_nr, time_t valid_from); - well_state_type * well_state_alloc_from_file( ecl_file_type * ecl_file , const ecl_grid_type * grid , int report_step , int well_nr); + well_state_type * well_state_alloc_from_file( ecl_file_type * ecl_file , const ecl_grid_type * grid , int report_step , int well_nr , bool load_segment_information); void well_state_add_connections( well_state_type * well_state , const ecl_grid_type * grid , @@ -50,10 +50,14 @@ extern "C" { bool well_state_add_MSW( well_state_type * well_state , const ecl_file_type * rst_file , - int well_nr); + int well_nr, + bool load_segment_information); + bool well_state_is_MSW( const well_state_type * well_state); + bool well_state_has_segment_data(const well_state_type * well_state); + well_segment_collection_type * well_state_get_segments( const well_state_type * well_state ); well_branch_collection_type * well_state_get_branches( const well_state_type * well_state ); diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_info.c b/ThirdParty/Ert/devel/libecl_well/src/well_info.c index 45bc8cfd08..b499cb92a5 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_info.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_info.c @@ -273,7 +273,7 @@ static void well_info_add_state( well_info_type * well_info , well_state_type * determine the number of wells. */ -void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr) { +void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file , int report_nr, bool load_segment_information) { int flags = ecl_file_get_flags(rst_file); if (ecl_file_flags_set(rst_file, ECL_FILE_CLOSE_STREAM)) { int new_flags = flags & ~ECL_FILE_CLOSE_STREAM; @@ -284,7 +284,7 @@ void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file ecl_rsthead_type * global_header = ecl_rsthead_alloc( rst_file ); int well_nr; for (well_nr = 0; well_nr < global_header->nwells; well_nr++) { - well_state_type * well_state = well_state_alloc_from_file( rst_file , well_info->grid , report_nr , well_nr ); + well_state_type * well_state = well_state_alloc_from_file( rst_file , well_info->grid , report_nr , well_nr , load_segment_information ); if (well_state != NULL) well_info_add_state( well_info , well_state ); } @@ -300,7 +300,7 @@ void well_info_add_wells( well_info_type * well_info , ecl_file_type * rst_file not have the SEQNUM keyword. */ -void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst_file) { +void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst_file, bool load_segment_information) { { int num_blocks = ecl_file_get_num_named_kw( rst_file , SEQNUM_KW ); int block_nr; @@ -311,7 +311,7 @@ void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst { // is not changed as a side const ecl_kw_type * seqnum_kw = ecl_file_iget_named_kw( rst_file , SEQNUM_KW , 0); // effect. int report_nr = ecl_kw_iget_int( seqnum_kw , 0 ); // - well_info_add_wells( well_info , rst_file , report_nr ); // + well_info_add_wells( well_info , rst_file , report_nr , load_segment_information ); // } // } // ecl_file_pop_block( rst_file ); // <------------------------------------------------------- @@ -326,23 +326,23 @@ void well_info_add_UNRST_wells( well_info_type * well_info , ecl_file_type * rst have crash and burn. */ -void well_info_load_rstfile( well_info_type * well_info , const char * filename) { +void well_info_load_rstfile( well_info_type * well_info , const char * filename, bool load_segment_information) { ecl_file_type * ecl_file = ecl_file_open( filename , 0); - well_info_load_rst_eclfile(well_info, ecl_file); + well_info_load_rst_eclfile(well_info, ecl_file, load_segment_information); ecl_file_close( ecl_file ); } -void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * ecl_file) { +void well_info_load_rst_eclfile( well_info_type * well_info , ecl_file_type * ecl_file, bool load_segment_information) { int report_nr; const char* filename = ecl_file_get_src_file(ecl_file); ecl_file_enum file_type = ecl_util_get_file_type( filename , NULL , &report_nr); if ((file_type == ECL_RESTART_FILE) || (file_type == ECL_UNIFIED_RESTART_FILE)) { if (file_type == ECL_RESTART_FILE) - well_info_add_wells( well_info , ecl_file , report_nr ); + well_info_add_wells( well_info , ecl_file , report_nr , load_segment_information ); else - well_info_add_UNRST_wells( well_info , ecl_file ); + well_info_add_UNRST_wells( well_info , ecl_file , load_segment_information ); } else util_abort("%s: invalid file type: %s - must be a restart file\n", __func__ , filename); diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c b/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c index c41e583af0..4929e5ac86 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_segment_collection.c @@ -104,23 +104,28 @@ int well_segment_collection_load_from_kw( well_segment_collection_type * segment const ecl_kw_type * iwel_kw , const ecl_kw_type * iseg_kw , const well_rseg_loader_type * rseg_loader , - const ecl_rsthead_type * rst_head) { - + const ecl_rsthead_type * rst_head , + bool load_segments , bool * is_MSW_well) { + int iwel_offset = rst_head->niwelz * well_nr; int segment_well_nr = ecl_kw_iget_int( iwel_kw , iwel_offset + IWEL_SEGMENTED_WELL_NR_ITEM) - 1; int segments_added = 0; if (segment_well_nr != IWEL_SEGMENTED_WELL_NR_NORMAL_VALUE) { int segment_index; - for (segment_index = 0; segment_index < rst_head->nsegmx; segment_index++) { - int segment_id = segment_index + WELL_SEGMENT_OFFSET; - well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_loader , rst_head , segment_well_nr , segment_index , segment_id ); - - if (well_segment_active( segment )) { - well_segment_collection_add( segment_collection , segment ); - segments_added++; - } else - well_segment_free( segment ); + *is_MSW_well = true; + + if (load_segments) { + for (segment_index = 0; segment_index < rst_head->nsegmx; segment_index++) { + int segment_id = segment_index + WELL_SEGMENT_OFFSET; + well_segment_type * segment = well_segment_alloc_from_kw( iseg_kw , rseg_loader , rst_head , segment_well_nr , segment_index , segment_id ); + + if (well_segment_active( segment )) { + well_segment_collection_add( segment_collection , segment ); + segments_added++; + } else + well_segment_free( segment ); + } } } return segments_added; diff --git a/ThirdParty/Ert/devel/libecl_well/src/well_state.c b/ThirdParty/Ert/devel/libecl_well/src/well_state.c index f85c720412..efcbd267b0 100644 --- a/ThirdParty/Ert/devel/libecl_well/src/well_state.c +++ b/ThirdParty/Ert/devel/libecl_well/src/well_state.c @@ -168,6 +168,7 @@ struct well_state_struct { int global_well_nr; bool open; well_type_enum type; + bool is_MSW_well; hash_type * connections; // hash well_segment_collection_type * segments; @@ -199,6 +200,7 @@ well_state_type * well_state_alloc(const char * well_name , int global_well_nr , well_state->connections = hash_alloc(); well_state->segments = well_segment_collection_alloc(); well_state->branches = well_branch_collection_alloc(); + well_state->is_MSW_well = false; /* See documentation of the 'IWEL_UNDOCUMENTED_ZERO' in well_const.h */ if ((type == UNDOCUMENTED_ZERO) && open) @@ -370,7 +372,8 @@ void well_state_add_connections( well_state_type * well_state , bool well_state_add_MSW( well_state_type * well_state , const ecl_file_type * rst_file , - int well_nr) { + int well_nr, + bool load_segment_information) { if (ecl_file_has_kw( rst_file , ISEG_KW)) { ecl_rsthead_type * rst_head = ecl_rsthead_alloc( rst_file ); @@ -378,50 +381,60 @@ bool well_state_add_MSW( well_state_type * well_state , const ecl_kw_type * iseg_kw = ecl_file_iget_named_kw( rst_file , ISEG_KW , 0); well_rseg_loader_type * rseg_loader = NULL; - int segments; + int segment_count; - if (ecl_file_has_kw( rst_file , RSEG_KW )) + if (ecl_file_has_kw( rst_file , RSEG_KW )) { + if (load_segment_information) rseg_loader = well_rseg_loader_alloc(rst_file); - - segments = well_segment_collection_load_from_kw( well_state->segments , - well_nr , - iwel_kw , - iseg_kw , - rseg_loader , - rst_head); - - if (segments) { - hash_iter_type * grid_iter = hash_iter_alloc( well_state->connections ); - while (!hash_iter_is_complete( grid_iter )) { - const char * grid_name = hash_iter_get_next_key( grid_iter ); - const well_conn_collection_type * connections = hash_get( well_state->connections , grid_name ); - well_segment_collection_add_connections( well_state->segments , grid_name , connections ); + + segment_count = well_segment_collection_load_from_kw( well_state->segments , + well_nr , + iwel_kw , + iseg_kw , + rseg_loader , + rst_head, + load_segment_information , + &well_state->is_MSW_well); + + + if (segment_count > 0) { + hash_iter_type * grid_iter = hash_iter_alloc( well_state->connections ); + while (!hash_iter_is_complete( grid_iter )) { + const char * grid_name = hash_iter_get_next_key( grid_iter ); + const well_conn_collection_type * connections = hash_get( well_state->connections , grid_name ); + well_segment_collection_add_connections( well_state->segments , grid_name , connections ); + } + hash_iter_free( grid_iter ); + + well_segment_collection_link( well_state->segments ); + well_segment_collection_add_branches( well_state->segments , well_state->branches ); } - hash_iter_free( grid_iter ); - well_segment_collection_link( well_state->segments ); - well_segment_collection_add_branches( well_state->segments , well_state->branches ); - } - ecl_rsthead_free( rst_head ); - - if(rseg_loader != NULL) { + ecl_rsthead_free( rst_head ); + + if (rseg_loader != NULL) { well_rseg_loader_free(rseg_loader); + } + + return true; } - - return true; } else return false; } bool well_state_is_MSW( const well_state_type * well_state) { - if (well_segment_collection_get_size( well_state->segments ) > 0) - return true; - else - return false; + return well_state->is_MSW_well; +} + +bool well_state_has_segment_data(const well_state_type * well_state){ + if (well_segment_collection_get_size( well_state->segments ) > 0) + return true; + else + return false; } -well_state_type * well_state_alloc_from_file( ecl_file_type * ecl_file , const ecl_grid_type * grid , int report_nr , int global_well_nr) { +well_state_type * well_state_alloc_from_file( ecl_file_type * ecl_file , const ecl_grid_type * grid , int report_nr , int global_well_nr ,bool load_segment_information) { if (ecl_file_has_kw( ecl_file , IWEL_KW)) { well_state_type * well_state = NULL; ecl_rsthead_type * global_header = ecl_rsthead_alloc( ecl_file ); @@ -456,7 +469,9 @@ well_state_type * well_state_alloc_from_file( ecl_file_type * ecl_file , const e well_state_add_connections( well_state , grid , ecl_file , global_well_nr); if (ecl_file_has_kw( ecl_file , ISEG_KW)) - well_state_add_MSW( well_state , ecl_file , global_well_nr ); + well_state_add_MSW( well_state , ecl_file , global_well_nr , load_segment_information); + + } ecl_rsthead_free( global_header ); return well_state; diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_lgr_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_lgr_load.c index ea656e1164..959ddda72d 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_lgr_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_lgr_load.c @@ -44,7 +44,7 @@ int main( int argc , char ** argv) { ecl_grid_type * grid = ecl_grid_alloc( argv[1] ); well_info_type * well_info = well_info_alloc( grid ); - well_info_load_rstfile( well_info , argv[2]); + well_info_load_rstfile( well_info , argv[2] , true); // List all wells: { diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c index f25551a98a..fe92e6dcd5 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_branch_conn_load.c @@ -56,8 +56,10 @@ int main(int argc , char ** argv) { well_conn_collection_load_from_kw( connections , iwel_kw , icon_kw , scon_kw , well_nr , rst_head); { well_segment_collection_type * segments = well_segment_collection_alloc(); + bool load_segment_information = true; + bool is_MSW_well = false; - if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head )) { + if (well_segment_collection_load_from_kw( segments , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head , load_segment_information , &is_MSW_well)) { well_branch_collection_type * branches = well_branch_collection_alloc(); test_assert_true( well_segment_well_is_MSW( well_nr , iwel_kw , rst_head)); diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c index 99c4427244..6fdfafee1b 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_segment_load.c @@ -74,9 +74,17 @@ int main(int argc , char ** argv) { { well_segment_collection_type * segments2 = well_segment_collection_alloc(); - test_assert_int_equal( well_segment_collection_load_from_kw( segments2 , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head ) , + bool load_segments = true; + bool is_MSW_well = false; + test_assert_int_equal( well_segment_collection_load_from_kw( segments2 , well_nr , iwel_kw , iseg_kw , rseg_loader , rst_head , load_segments , &is_MSW_well ) , well_segment_collection_get_size( segments)); + if (well_segment_collection_get_size( segments ) > 0) + test_assert_true( is_MSW_well ); + else + test_assert_false( is_MSW_well ); + + well_segment_collection_link( segments ); well_segment_collection_link( segments2 ); well_segment_collection_free( segments ); diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_state_load.c b/ThirdParty/Ert/devel/libecl_well/tests/well_state_load.c index d9375259d4..e96d505f98 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_state_load.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_state_load.c @@ -45,7 +45,8 @@ int main(int argc , char ** argv) { bool open = false; well_type_enum type = GAS_INJECTOR; int global_well_nr = 0; - + bool load_segment_information = true; + for (global_well_nr = 0; global_well_nr < header->nwells; global_well_nr++) { well_state_type * well_state = well_state_alloc(well_name , global_well_nr , open , type , report_nr , valid_from); test_assert_true( well_state_is_instance( well_state) ); @@ -55,7 +56,7 @@ int main(int argc , char ** argv) { test_assert_false( well_state_has_grid_connections( well_state , "???" )); test_assert_true( well_state_has_global_connections( well_state )); - well_state_add_MSW( well_state , rst_file , global_well_nr ); + well_state_add_MSW( well_state , rst_file , global_well_nr , load_segment_information ); { const well_segment_collection_type * segments = well_state_get_segments( well_state ); const well_branch_collection_type * branches = well_state_get_branches( well_state ); diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_state_load_missing_RSEG.c b/ThirdParty/Ert/devel/libecl_well/tests/well_state_load_missing_RSEG.c index b0a7e4071e..21187458af 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_state_load_missing_RSEG.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_state_load_missing_RSEG.c @@ -45,12 +45,13 @@ int main(int argc , char ** argv) { bool open = false; well_type_enum type = GAS_INJECTOR; int global_well_nr = 0; + bool load_segment_information = false; for (global_well_nr = 0; global_well_nr < header->nwells; global_well_nr++) { well_state_type * well_state = well_state_alloc(well_name , global_well_nr , open , type , report_nr , valid_from); test_assert_true( well_state_is_instance( well_state) ); well_state_add_connections( well_state , grid , rst_file , 0 ); - well_state_add_MSW( well_state , rst_file , global_well_nr ); + well_state_add_MSW( well_state , rst_file , global_well_nr , load_segment_information ); { const well_segment_collection_type * segments = well_state_get_segments( well_state ); diff --git a/ThirdParty/Ert/devel/libecl_well/tests/well_ts.c b/ThirdParty/Ert/devel/libecl_well/tests/well_ts.c index 844681c591..73c3404751 100644 --- a/ThirdParty/Ert/devel/libecl_well/tests/well_ts.c +++ b/ThirdParty/Ert/devel/libecl_well/tests/well_ts.c @@ -57,7 +57,7 @@ int main(int argc , char ** argv) { int i; for (i=0; i < stringlist_get_size( file_list ); i++) { printf("Loading file:%s \n",stringlist_iget( file_list , i )); - well_info_load_rstfile( well_info , stringlist_iget(file_list , i)); + well_info_load_rstfile( well_info , stringlist_iget(file_list , i) , true); } well_info_free( well_info ); } @@ -67,7 +67,7 @@ int main(int argc , char ** argv) { int i; stringlist_reverse( file_list ); for (i=0; i < stringlist_get_size( file_list ); i++) - well_info_load_rstfile( well_info , stringlist_iget(file_list , i)); + well_info_load_rstfile( well_info , stringlist_iget(file_list , i), true); well_info_free( well_info ); } diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_init.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_init.c index b74e1a0f33..b8f7d3519f 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_init.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_init.c @@ -45,7 +45,7 @@ void enkf_tui_init(enkf_main_type * enkf_main, bool all_members , bool all_param const ensemble_config_type * ensemble_config = enkf_main_get_ensemble_config(enkf_main); int ens_size = enkf_main_get_ensemble_size( enkf_main ); int iens1, iens2; - init_mode_enum init_mode = INIT_FORCE; + init_mode_type init_mode = INIT_FORCE; bool iens_valid = false; /* iens2 should be interpreted as __inclusive__ */ diff --git a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c index 3cef72a78b..7c38b055fe 100644 --- a/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c +++ b/ThirdParty/Ert/devel/libenkf/applications/ert_tui/enkf_tui_run.c @@ -35,6 +35,7 @@ #include #include #include +#include #include #include @@ -138,10 +139,6 @@ void enkf_tui_run_exp(void * enkf_main) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; - { char * prompt = util_alloc_sprintf("Which realizations to simulate (Ex: 1,3-5) [M to return to menu] : " , ens_size); @@ -155,7 +152,7 @@ void enkf_tui_run_exp(void * enkf_main) { free( prompt ); } if (bool_vector_count_equal(iactive , true)) - enkf_main_run_exp(enkf_main , iactive , true , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , true ); bool_vector_free(iactive); } @@ -167,9 +164,6 @@ void enkf_tui_run_create_runpath__(void * __enkf_main) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; { char * prompt = util_alloc_sprintf("Which realizations to create[ensemble size:%d] : " , ens_size); char * select_string; @@ -181,7 +175,7 @@ void enkf_tui_run_create_runpath__(void * __enkf_main) { util_safe_free( select_string ); free( prompt ); } - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -197,11 +191,8 @@ void enkf_tui_run_manual_load__( void * arg ) { enkf_main_type * enkf_main = enkf_main_safe_cast( arg ); const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc( 0 , false ); - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; int iter = 0; - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - { char * prompt = util_alloc_sprintf("Which realizations to load (Ex: 1,3-5) [M to return to menu] : [ensemble size:%d] : " , ens_size); char * select_string; @@ -243,20 +234,7 @@ void enkf_tui_run_manual_load__( void * arg ) { } enkf_main_load_from_forward_model(enkf_main, iter , iactive, realizations_msg_list); - - { - qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); - runpath_list_type * runpath_list = qc_module_get_runpath_list( qc_module ); - - for (iens = 0; iens < ens_size; ++iens) { - if (bool_vector_iget(iactive , iens)) { - const enkf_state_type * state = enkf_main_iget_state( enkf_main , iens ); - runpath_list_add( runpath_list , iens , iter, enkf_state_get_run_path( state ) , enkf_state_get_eclbase( state )); - } - } - qc_module_export_runpath_list( qc_module ); - } - + for (iens = 0; iens < ens_size; ++iens) { stringlist_type * msg_list = realizations_msg_list[iens]; if (bool_vector_iget(iactive, iens)) { diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h index a72b944359..6ea901f240 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_fs.h @@ -81,7 +81,7 @@ extern "C" { void enkf_fs_debug_fprintf( const enkf_fs_type * fs); - void enkf_fs_create_fs( const char * mount_point , fs_driver_impl driver_id , void * arg); + enkf_fs_type * enkf_fs_create_fs( const char * mount_point , fs_driver_impl driver_id , void * arg, bool mount); char * enkf_fs_alloc_case_filename( const enkf_fs_type * fs , const char * input_name); char * enkf_fs_alloc_case_member_filename( const enkf_fs_type * fs , int iens , const char * input_name); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h index 6a1db5eacc..98e8c29e27 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_main.h @@ -61,6 +61,7 @@ extern "C" { #include #include #include +#include /*****************************************************************/ @@ -100,7 +101,7 @@ extern "C" { void enkf_main_free(enkf_main_type * ); void enkf_main_exit(enkf_main_type * enkf_main); void enkf_main_init_eclipse(enkf_main_type * , int , int ); - void enkf_main_init_run( enkf_main_type * enkf_main, const bool_vector_type * iactive , run_mode_type run_mode , init_mode_enum init_mode); + void enkf_main_init_run( enkf_main_type * enkf_main, const ert_run_context_type * run_context); void enkf_main_load_ecl_init_mt(enkf_main_type * enkf_main , int ); void enkf_main_load_ecl_complete_mt(enkf_main_type *); void enkf_main_iload_ecl_mt(enkf_main_type *enkf_main , int ); @@ -110,14 +111,11 @@ extern "C" { bool enkf_main_smoother_update(enkf_main_type * enkf_main , enkf_fs_type * target_fs); void enkf_main_run_post_workflow( enkf_main_type * enkf_main ); - bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode, int iter); + bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_type init_mode, int iter); - void enkf_main_run_exp(enkf_main_type * enkf_main , - bool_vector_type * iactive , - bool simulate , - int init_step_parameters , - int start_report , - state_enum start_state); + void enkf_main_run_exp(enkf_main_type * enkf_main , + bool_vector_type * iactive , + bool simulate); void enkf_main_run_assimilation(enkf_main_type * enkf_main , @@ -256,9 +254,8 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ enkf_fs_type * fs); - void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs); - void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list); - + void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , const bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs); + void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , const bool_vector_type * iactive, stringlist_type ** realizations_msg_list); void enkf_main_load_from_forward_model_from_gui(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, enkf_fs_type * fs); void enkf_main_rank_on_observations(enkf_main_type * enkf_main, @@ -296,12 +293,12 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ const stringlist_type * param_list , int iens1 , int iens2, - init_mode_enum init_mode); + init_mode_type init_mode); void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_main , const stringlist_type * param_list , const bool_vector_type * iens_mask , - init_mode_enum init_mode); + init_mode_type init_mode); void enkf_main_init_current_case_from_existing(enkf_main_type * enkf_main, enkf_fs_type * source_case_fs, @@ -351,6 +348,20 @@ pca_plot_data_type * enkf_main_alloc_pca_plot_data( const enkf_main_type * enkf_ state_map_type * enkf_main_alloc_readonly_state_map( const enkf_main_type * enkf_main , const char * case_path); time_map_type * enkf_main_alloc_readonly_time_map( const enkf_main_type * enkf_main , const char * case_path ); + ert_run_context_type * enkf_main_alloc_ert_run_context_ENSEMBLE_EXPERIMENT(const enkf_main_type * enkf_main , enkf_fs_type * fs , const bool_vector_type * iactive , init_mode_type init_mode , int iter); + ert_run_context_type * enkf_main_alloc_ert_run_context_INIT_ONLY(const enkf_main_type * enkf_main , enkf_fs_type * fs , const bool_vector_type * iactive , init_mode_type init_mode , int iter); + ert_run_context_type * enkf_main_alloc_ert_run_context_ENKF_ASSIMILATION( const enkf_main_type * enkf_main , + enkf_fs_type * fs , + const bool_vector_type * iactive , + init_mode_type init_mode , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + int iter); + + + UTIL_SAFE_CAST_HEADER(enkf_main); UTIL_IS_INSTANCE_HEADER(enkf_main); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h index 750df92bb6..822d9cdff9 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_state.h @@ -51,6 +51,7 @@ extern "C" { #include #include #include +#include typedef struct enkf_state_struct enkf_state_type; @@ -61,13 +62,8 @@ typedef struct enkf_state_struct enkf_state_type; void enkf_state_set_keep_runpath( enkf_state_type * enkf_state , keep_runpath_type keep_runpath); keep_runpath_type member_config_get_keep_runpath(const member_config_type * member_config); //void * enkf_state_complete_forward_model__(void * arg ); - job_status_type enkf_state_get_run_status( const enkf_state_type * enkf_state ); - time_t enkf_state_get_start_time( const enkf_state_type * enkf_state ); - time_t enkf_state_get_submit_time( const enkf_state_type * enkf_state ); - bool enkf_state_resubmit_simulation( enkf_state_type * enkf_state , enkf_fs_type * fs , bool resample); - bool enkf_state_kill_simulation( const enkf_state_type * enkf_state ); void * enkf_state_load_from_forward_model_mt( void * arg ); - void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs, const stringlist_type * param_list , init_mode_enum init_mode); + void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs, const stringlist_type * param_list , init_mode_type init_mode); void enkf_state_fread(enkf_state_type * , enkf_fs_type * fs , int , int , state_enum ); bool enkf_state_get_analyzed(const enkf_state_type * ); void enkf_state_set_analyzed(enkf_state_type * , bool ); @@ -75,20 +71,23 @@ typedef struct enkf_state_struct enkf_state_type; void enkf_state_swapin_node(const enkf_state_type * , const char *); void enkf_state_iset_eclpath(enkf_state_type * , int , const char *); enkf_node_type * enkf_state_get_node(const enkf_state_type * , const char * ); + bool enkf_state_has_node(const enkf_state_type * enkf_state , const char * node_key); void enkf_state_del_node(enkf_state_type * , const char * ); void enkf_state_load_ecl_summary(enkf_state_type * , bool , int ); void * enkf_state_run_eclipse__(void * ); void * enkf_state_start_forward_model__(void * ); void enkf_state_load_from_forward_model(enkf_state_type * enkf_state , - enkf_fs_type * fs , - int * result , - bool interactive , - stringlist_type * msg_list); + run_arg_type * run_arg , + int * result , + bool interactive , + stringlist_type * msg_list); void enkf_state_forward_init(enkf_state_type * enkf_state , - enkf_fs_type * fs , + run_arg_type * run_arg , int * result ); + + void enkf_state_init_eclipse(enkf_state_type *enkf_state, const run_arg_type * run_arg ); enkf_state_type * enkf_state_alloc(int , rng_type * main_rng , @@ -111,7 +110,7 @@ typedef struct enkf_state_struct enkf_state_type; void enkf_state_sample(enkf_state_type * , int); void enkf_state_fwrite(const enkf_state_type * , enkf_fs_type * fs , int , int , state_enum ); void enkf_state_ens_read( enkf_state_type * , const char * , int); - void enkf_state_ecl_write(enkf_state_type *, enkf_fs_type * fs); + void enkf_state_ecl_write(enkf_state_type *, const run_arg_type * run_arg , enkf_fs_type * fs); void enkf_state_free(enkf_state_type * ); void enkf_state_apply(enkf_state_type * , enkf_node_ftype1 * , int ); void enkf_state_serialize(enkf_state_type * , size_t); @@ -124,25 +123,15 @@ typedef struct enkf_state_struct enkf_state_type; rng_type * enkf_state_get_rng( const enkf_state_type * enkf_state ); unsigned int enkf_state_get_random( enkf_state_type * enkf_state ); - -/*****************************************************************/ - void enkf_state_set_inactive(enkf_state_type * state); - - void enkf_state_init_run(enkf_state_type * state , - run_mode_type , - bool active , - int max_internal_submit , - int init_step_parameter , - state_enum init_state_parameter , - state_enum init_state_dynamic , - int load_start , - int iter , - int step1 , - int step2 ); - int enkf_state_get_queue_index(const enkf_state_type * enkf_state); - - run_status_type enkf_state_get_simple_run_status(const enkf_state_type * state); + +/******************************************************************/ +/* Forward model callbacks: */ + +bool enkf_state_complete_forward_modelOK__(void * arg ); +bool enkf_state_complete_forward_modelRETRY__(void * arg ); +bool enkf_state_complete_forward_modelEXIT__(void * arg ); + #ifdef __cplusplus } #endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_types.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_types.h index 3be7ecb56b..05a3841c46 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_types.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/enkf_types.h @@ -225,7 +225,7 @@ typedef enum { PARTLY_ACTIVE = 3 /* Partly active - must supply additonal type spesific information on what is active.*/ } active_mode_type; - + typedef struct { int report_step; int iens; @@ -249,7 +249,7 @@ typedef enum { INIT_NONE = 0, INIT_CONDITIONAL = 1, INIT_FORCE = 2 - } init_mode_enum; + } init_mode_type; diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_run_context.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_run_context.h new file mode 100644 index 0000000000..f848b5186b --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_run_context.h @@ -0,0 +1,95 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'run_info.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __ERT_RUN_CONTEXT_H__ +#define __ERT_RUN_CONTEXT_H__ +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include +#include + +#include +#include +#include + +typedef struct ert_run_context_struct ert_run_context_type; + + + ert_run_context_type * ert_run_context_alloc_ENSEMBLE_EXPERIMENT(enkf_fs_type * fs , + const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter); + + + ert_run_context_type * ert_run_context_alloc_INIT_ONLY(enkf_fs_type * init_fs , const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter); + + ert_run_context_type * ert_run_context_alloc_ENKF_ASSIMILATION(enkf_fs_type * fs , + const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + int iter); + + + + ert_run_context_type * ert_run_context_alloc_SMOOTHER_RUN(enkf_fs_type * simulate_fs , enkf_fs_type * target_update_fs , + const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter); + + void ert_run_context_free( ert_run_context_type * ); + int ert_run_context_get_size( const ert_run_context_type * context ); + run_mode_type ert_run_context_get_mode( const ert_run_context_type * context ); + init_mode_type ert_run_context_get_init_mode( const ert_run_context_type * context ); + bool_vector_type * ert_run_context_get_iactive( const ert_run_context_type * context ); + int ert_run_context_get_iter( const ert_run_context_type * context ); + int ert_run_context_get_step1( const ert_run_context_type * context ); + int ert_run_context_get_step2( const ert_run_context_type * context ); + int ert_run_context_get_load_start( const ert_run_context_type * context ); + run_arg_type * ert_run_context_iget_arg( const ert_run_context_type * context , int index); + run_arg_type * ert_run_context_iens_get_arg( const ert_run_context_type * context , int iens); + + enkf_fs_type * ert_run_context_get_init_fs(const ert_run_context_type * run_context); + enkf_fs_type * ert_run_context_get_result_fs(const ert_run_context_type * run_context); + enkf_fs_type * ert_run_context_get_update_target_fs(const ert_run_context_type * run_context); + + UTIL_IS_INSTANCE_HEADER( ert_run_context ); + + +#ifdef __cplusplus +} +#endif +#endif + + diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h index d308cae2aa..e40b52c0ad 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/ert_workflow_list.h @@ -54,7 +54,7 @@ extern "C" { const config_error_type * ert_workflow_list_get_last_error( const ert_workflow_list_type * workflow_list); void ert_workflow_list_set_verbose( ert_workflow_list_type * workflow_list , bool verbose); bool ert_workflow_list_run_workflow_blocking(ert_workflow_list_type * workflow_list , const char * workflow_name , void * self); - subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list); + const subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list); int ert_workflow_list_get_size( const ert_workflow_list_type * workflow_list); UTIL_IS_INSTANCE_HEADER( ert_workflow_list ); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h index 4787e97fb0..c5f23173f3 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_data.h @@ -43,6 +43,7 @@ const bool_vector_type * gen_data_get_forward_mask( const gen_data_type * gen_d int gen_data_get_size(const gen_data_type * ); double gen_data_iget_double(const gen_data_type * , int ); void gen_data_export(const gen_data_type * gen_data , const char * full_path , gen_data_file_format_type export_type , fortio_type * fortio); +void gen_data_export_data(const gen_data_type * gen_data , double_vector_type * export_data); gen_data_file_format_type gen_data_guess_export_type( const gen_data_type * gen_data ); const char * gen_data_get_key( const gen_data_type * gen_data); void gen_data_upgrade_103(const char * filename); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h index 76b3f4c2cd..95f7a0c9ae 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/gen_kw.h @@ -23,6 +23,7 @@ extern "C" { #endif #include +#include #include #include @@ -42,6 +43,7 @@ void gen_kw_free(gen_kw_type *); int gen_kw_data_size( gen_kw_type * ); double gen_kw_data_iget( gen_kw_type * , int , bool ); void gen_kw_data_iset( gen_kw_type * , int , double ); +void gen_kw_data_set_vector( gen_kw_type * gen_kw, const double_vector_type * values ); double gen_kw_data_get( gen_kw_type * , const char * , bool ); void gen_kw_data_set( gen_kw_type *, const char *, double ); bool gen_kw_data_has_key( gen_kw_type *, const char *); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h index 0694d51962..3fc40f20fe 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/qc_module.h @@ -41,7 +41,7 @@ extern "C" { void qc_module_export_runpath_list( const qc_module_type * qc_module ); void qc_module_add_config_items( config_type * config ); void qc_module_set_runpath_list_file( qc_module_type * qc_module , const char * path, const char * filename); - const char * qc_module_get_runpath_list_file( qc_module_type * qc_module); + const char * qc_module_get_runpath_list_file(const qc_module_type * qc_module); diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/run_arg.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/run_arg.h new file mode 100644 index 0000000000..5b65c7c1b1 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/run_arg.h @@ -0,0 +1,89 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'run_arg.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __RUN_ARG_H__ +#define __RUN_ARG_H__ +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include + +#include +#include + + +typedef struct run_arg_struct run_arg_type; + + +UTIL_SAFE_CAST_HEADER( run_arg ); +UTIL_IS_INSTANCE_HEADER( run_arg ); + + + run_arg_type * run_arg_alloc_ENSEMBLE_EXPERIMENT(enkf_fs_type * fs , int iens , int iter , const char * runpath); + run_arg_type * run_arg_alloc_INIT_ONLY(enkf_fs_type * init_fs , int iens , int iter , const char * runpath); + run_arg_type * run_arg_alloc_SMOOTHER_RUN(enkf_fs_type * simulate_fs , enkf_fs_type * update_target_fs , int iens , int iter , const char * runpath); + run_arg_type * run_arg_alloc_ENKF_ASSIMILATION(enkf_fs_type * fs , + int iens , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + const char * runpath); + + + + state_enum run_arg_get_dynamic_init_state( const run_arg_type * run_arg ); + state_enum run_arg_get_parameter_init_state( const run_arg_type * run_arg ); + int run_arg_get_parameter_init_step( const run_arg_type * run_arg ); + bool run_arg_is_ready( const run_arg_type * run_arg); + int run_arg_get_step1( const run_arg_type * run_arg ); + int run_arg_get_step2( const run_arg_type * run_arg ); + run_mode_type run_arg_get_run_mode( const run_arg_type * run_arg ); + int run_arg_get_load_start( const run_arg_type * run_arg ); + int run_arg_get_iens( const run_arg_type * run_arg ); + int run_arg_get_iter( const run_arg_type * run_arg ); + void run_arg_increase_submit_count( run_arg_type * run_arg ); + void run_arg_set_queue_index( run_arg_type * run_arg , int queue_index); + + void run_arg_set_ready( run_arg_type * run_arg , bool ready); + + void run_arg_free(run_arg_type * run_arg); + void run_arg_free__(void * arg); + const char * run_arg_get_runpath( const run_arg_type * run_arg); + void run_arg_complete_run(run_arg_type * run_arg); + run_status_type run_arg_get_run_status( const run_arg_type * run_arg ); + + void run_arg_set_inactive( run_arg_type * run_arg ); + int run_arg_get_queue_index( const run_arg_type * run_arg ); + + bool run_arg_can_retry( const run_arg_type * run_arg ); + + run_status_type run_arg_get_run_status( const run_arg_type * run_arg); + void run_arg_set_run_status( run_arg_type * run_arg , run_status_type run_status); + + enkf_fs_type * run_arg_get_init_fs(const run_arg_type * run_arg); + enkf_fs_type * run_arg_get_update_target_fs(const run_arg_type * run_arg); + enkf_fs_type * run_arg_get_result_fs(const run_arg_type * run_arg); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h index 321bf36a14..2caf29209b 100644 --- a/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h +++ b/ThirdParty/Ert/devel/libenkf/include/ert/enkf/runpath_list.h @@ -28,7 +28,7 @@ extern "C" { typedef struct runpath_list_struct runpath_list_type; void runpath_list_free( runpath_list_type * list ); - runpath_list_type * runpath_list_alloc(); + runpath_list_type * runpath_list_alloc(const char * export_file ); int runpath_list_size( const runpath_list_type * list ); void runpath_list_add( runpath_list_type * list , int iens , int iter, const char * runpath , const char * basename); void runpath_list_clear( runpath_list_type * list ); @@ -37,7 +37,10 @@ extern "C" { int runpath_list_iget_iter( runpath_list_type * list , int index); void runpath_list_set_line_fmt( runpath_list_type * list , const char * line_fmt ); const char * runpath_list_get_line_fmt( const runpath_list_type * list ); - void runpath_list_fprintf( runpath_list_type * list , FILE * stream); + void runpath_list_fprintf( runpath_list_type * list); + const char * runpath_list_get_export_file( const runpath_list_type * list ); + void runpath_list_set_export_file( runpath_list_type * list , const char * export_file ); + #ifdef __cplusplus diff --git a/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt b/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt index 50d6960657..99e7a8178d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libenkf/src/CMakeLists.txt @@ -83,7 +83,9 @@ set( source_files cases_config.c state_map.c ert_test_context.c - ert_log.c) + ert_log.c + run_arg.c + ert_run_context.c) set( header_files ert_report.h @@ -178,7 +180,9 @@ set( header_files cases_config.h state_map.h ert_test_context.h - ert_log.h) + ert_log.h + run_arg.h + ert_run_context.h) add_library( enkf ${LIBRARY_TYPE} ${source_files} ) diff --git a/ThirdParty/Ert/devel/libenkf/src/ecl_refcase_list.c b/ThirdParty/Ert/devel/libenkf/src/ecl_refcase_list.c index 1328af00d6..9e2e599729 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ecl_refcase_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/ecl_refcase_list.c @@ -173,10 +173,11 @@ void ecl_refcase_list_free( ecl_refcase_list_type * refcase_list ) { const ecl_sum_type * ecl_refcase_list_get_default( ecl_refcase_list_type * refcase_list ) { + const ecl_sum_type * return_value = NULL; if (refcase_list->default_case) - return sum_pair_get_ecl_sum( refcase_list->default_case ); - else - return NULL; + return_value = sum_pair_get_ecl_sum( refcase_list->default_case ); + + return return_value; } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c index e2cc90fffb..c3bfc0a96d 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_fs.c @@ -462,7 +462,7 @@ static enkf_fs_type * enkf_fs_mount_plain( FILE * fstab_stream , const char * m -void enkf_fs_create_fs( const char * mount_point, fs_driver_impl driver_id , void * arg) { +enkf_fs_type * enkf_fs_create_fs( const char * mount_point, fs_driver_impl driver_id , void * arg , bool mount) { const int num_drivers = 32; FILE * stream = fs_driver_open_fstab( mount_point , true ); if (stream != NULL) { @@ -481,6 +481,11 @@ void enkf_fs_create_fs( const char * mount_point, fs_driver_impl driver_id , voi } fclose( stream ); } + + if (mount) + return enkf_fs_mount( mount_point ); + else + return NULL; } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main.c index 170288619f..0745668a88 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_main.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main.c @@ -55,6 +55,7 @@ #include #include +#include #include #include #include @@ -105,6 +106,7 @@ #include #include #include +#include /**/ @@ -1430,59 +1432,65 @@ bool enkf_main_smoother_update(enkf_main_type * enkf_main , enkf_fs_type * targe -static void enkf_main_report_run_failure( const enkf_main_type * enkf_main , int iens) { +static void enkf_main_report_run_failure( const enkf_main_type * enkf_main , const run_arg_type * run_arg) { job_queue_type * job_queue = site_config_get_job_queue(enkf_main->site_config); - const enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); - int queue_index = enkf_state_get_queue_index( enkf_state ); + int queue_index = run_arg_get_queue_index( run_arg ); const char * stderr_file = job_queue_iget_stderr_file( job_queue , queue_index ); if (stderr_file == NULL) ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s job:%s reason:%s" , - job_queue_iget_run_path( job_queue , queue_index), - job_queue_iget_failed_job( job_queue , queue_index), - job_queue_iget_error_reason( job_queue , queue_index )); + job_queue_iget_run_path( job_queue , queue_index), + job_queue_iget_failed_job( job_queue , queue_index), + job_queue_iget_error_reason( job_queue , queue_index )); else ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s job:%s reason:%s Check file:%s" , - job_queue_iget_run_path( job_queue , queue_index), - job_queue_iget_failed_job( job_queue , queue_index), - job_queue_iget_error_reason( job_queue , queue_index ), - job_queue_iget_stderr_file( job_queue , queue_index )); + job_queue_iget_run_path( job_queue , queue_index), + job_queue_iget_failed_job( job_queue , queue_index), + job_queue_iget_error_reason( job_queue , queue_index ), + job_queue_iget_stderr_file( job_queue , queue_index )); } -static void enkf_main_report_load_failure( const enkf_main_type * enkf_main , int iens) { +static void enkf_main_report_load_failure( const enkf_main_type * enkf_main , run_arg_type * run_arg ) { job_queue_type * job_queue = site_config_get_job_queue(enkf_main->site_config); - const enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); - int queue_index = enkf_state_get_queue_index( enkf_state ); - + int queue_index = run_arg_get_queue_index( run_arg ); + ert_log_add_fmt_message( 1 , stderr , "** ERROR ** path:%s - Could not load all required data", - job_queue_iget_run_path( job_queue , queue_index)); + job_queue_iget_run_path( job_queue , queue_index)); } + static void enkf_main_monitor_job_queue ( const enkf_main_type * enkf_main) { - job_queue_type * job_queue = site_config_get_job_queue(enkf_main->site_config); - int min_realisations = analysis_config_get_min_realisations(enkf_main->analysis_config); - - bool cont = true; - if (0 >= min_realisations) - cont = false; + if (analysis_config_get_stop_long_running(enkf_main_get_analysis_config( enkf_main ))) { - while (cont) { - //Check if minimum number of realizations have run, and if so, kill the rest after a certain time - if ((job_queue_get_num_complete(job_queue) >= min_realisations)) { - job_queue_set_auto_job_stop_time(job_queue); - cont = false; - } + job_queue_type * job_queue = site_config_get_job_queue(enkf_main->site_config); + int min_realisations = analysis_config_get_min_realisations(enkf_main->analysis_config); - //Check if minimum number of realizations is not possible. If so, it is time to give up - int possible_sucesses = job_queue_get_num_running(job_queue) + job_queue_get_num_waiting(job_queue) + job_queue_get_num_pending(job_queue) + job_queue_get_num_complete(job_queue); - if (possible_sucesses < min_realisations) { - cont = false; - } + bool cont = true; + if (0 >= min_realisations) + cont = false; - if (cont) { - util_usleep(10000); + while (cont) { + //Check if minimum number of realizations have run, and if so, kill the rest after a certain time + if ((job_queue_get_num_complete(job_queue) >= min_realisations)) { + job_queue_set_auto_job_stop_time(job_queue); + cont = false; + } + + //Check if minimum number of realizations is not possible. If so, it is time to give up + int possible_sucesses = job_queue_get_num_running(job_queue) + + job_queue_get_num_waiting(job_queue) + + job_queue_get_num_pending(job_queue) + + job_queue_get_num_complete(job_queue); + + if (possible_sucesses < min_realisations) { + cont = false; + } + + if (cont) { + util_usleep(10000); + } } } } @@ -1492,152 +1500,220 @@ void enkf_main_run_post_workflow( enkf_main_type * enkf_main ) { } -/** - If all simulations have completed successfully the function will - return true, otherwise it will return false. -*/ +void enkf_main_isubmit_job( enkf_main_type * enkf_main , run_arg_type * run_arg ) { + const ecl_config_type * ecl_config = enkf_main_get_ecl_config( enkf_main ); + enkf_state_type * enkf_state = enkf_main->ensemble[ run_arg_get_iens(run_arg) ]; + const member_config_type * member_config = enkf_state_get_member_config( enkf_state ); + const site_config_type * site_config = enkf_main_get_site_config( enkf_main ); + const char * job_script = site_config_get_job_script( site_config ); + job_queue_type * job_queue = site_config_get_job_queue( site_config ); + const char * run_path = run_arg_get_runpath( run_arg ); + + { + runpath_list_type * runpath_list = qc_module_get_runpath_list( enkf_main->qc_module ); + runpath_list_add( runpath_list , + run_arg_get_iens( run_arg ), + run_arg_get_iter( run_arg ), + run_arg_get_runpath( run_arg ), + enkf_state_get_eclbase( enkf_state )); + } + + enkf_state_init_eclipse( enkf_state , run_arg ); + if (run_arg_get_run_mode(run_arg) != INIT_ONLY) { + // The job_queue_node will take ownership of this arg_pack; and destroy it when + // the job_queue_node is discarded. + arg_pack_type * load_arg = arg_pack_alloc(); + + /* + Prepare the job and submit it to the queue + */ + arg_pack_append_ptr( load_arg , enkf_state ); + arg_pack_append_ptr( load_arg , run_arg ); + + { + int queue_index = job_queue_add_job_mt( job_queue , + job_script , + enkf_state_complete_forward_modelOK__ , + enkf_state_complete_forward_modelRETRY__ , + enkf_state_complete_forward_modelEXIT__, + load_arg , + ecl_config_get_num_cpu( ecl_config ), + run_path , + member_config_get_jobname( member_config ) , + 1, + (const char *[1]) { run_path } ); + + run_arg_set_queue_index( run_arg , queue_index ); + run_arg_increase_submit_count( run_arg ); + } + } +} + + + +static void * enkf_main_isubmit_job__( void * arg ) { + arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + enkf_main_type * enkf_main = enkf_main_safe_cast( arg_pack_iget_ptr( arg_pack , 0 )); + run_arg_type * run_arg = run_arg_safe_cast( arg_pack_iget_ptr( arg_pack , 1)); + + enkf_main_isubmit_job( enkf_main , run_arg ); + arg_pack_free( arg_pack ); + return NULL; +} -static bool enkf_main_run_step(enkf_main_type * enkf_main , - run_mode_type run_mode , - bool_vector_type * iactive , - int load_start , /* For internalizing results, and the first step in the update when merging. */ - int init_step_parameter , - state_enum init_state_parameter , - state_enum init_state_dynamic , - int iter , - int step1 , - int step2) { - if (step1 > 0) - ecl_config_assert_restart( enkf_main_get_ecl_config( enkf_main ) ); +void enkf_main_submit_jobs( enkf_main_type * enkf_main , + const ert_run_context_type * run_context ) { + runpath_list_type * runpath_list = qc_module_get_runpath_list( enkf_main->qc_module ); + runpath_list_clear( runpath_list ); { - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - bool verbose_queue = enkf_main->verbose; - int max_internal_submit = model_config_get_max_internal_submit(enkf_main->model_config); - const int active_ens_size = util_int_min( bool_vector_size( iactive ) , enkf_main_get_ensemble_size( enkf_main )); - int job_size; int iens; + const bool_vector_type * iactive = ert_run_context_get_iactive( run_context ); + const int active_ens_size = util_int_min( bool_vector_size( iactive ) , enkf_main_get_ensemble_size( enkf_main )); + thread_pool_type * submit_threads = thread_pool_alloc( 4 , true ); + + for (iens = 0; iens < active_ens_size; iens++) { + if (bool_vector_iget(iactive , iens)) { + run_arg_type * run_arg = ert_run_context_iens_get_arg( run_context , iens); + arg_pack_type * arg_pack = arg_pack_alloc( ); // This is discarded by the enkf_main_isubmit_job__() + + arg_pack_append_ptr( arg_pack , enkf_main ); + arg_pack_append_ptr( arg_pack , run_arg); + + thread_pool_add_job(submit_threads , enkf_main_isubmit_job__ , arg_pack); + } + } - state_map_deselect_matching( enkf_fs_get_state_map( fs ) , iactive , STATE_LOAD_FAILURE | STATE_PARENT_FAILURE); + /* + After this join all directories/files for the simulations + have been set up correctly, and all the jobs have been added + to the job_queue manager. + */ - if (enkf_main->verbose) { - if (run_mode == ENKF_ASSIMILATION) - printf("Starting forward step: %d -> %d\n",step1 , step2); - } + thread_pool_join(submit_threads); + thread_pool_free(submit_threads); + } + runpath_list_fprintf( runpath_list ); +} + + +/** + If all simulations have completed successfully the function will + return true, otherwise it will return false. +*/ + + +static bool enkf_main_run_step(enkf_main_type * enkf_main , + const ert_run_context_type * run_context) { +// run_mode_type run_mode , +// bool_vector_type * iactive , +// int load_start , /* For internalizing results, and the first step in the update when merging. */ +// int init_step_parameter , +// state_enum init_state_parameter , +// state_enum init_state_dynamic , +// int iter , +// int step1 , +// int step2) { + + + if (ert_run_context_get_step1(run_context)) + ecl_config_assert_restart( enkf_main_get_ecl_config( enkf_main ) ); + + { + int job_size , iens; + bool verbose_queue = enkf_main->verbose; + const int active_ens_size = util_int_min( bool_vector_size( ert_run_context_get_iactive( run_context )) , enkf_main_get_ensemble_size( enkf_main )); + + //enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + //enkf_fs_type * target_fs = fs; // ERRORE + //path_fmt_type * runpath_fmt = model_config_get_runpath_fmt( enkf_main->model_config ); + + // + //ert_run_context_type * run_context; + //int job_size; + //int iens; + // + //switch (run_mode) { + //case(INIT_ONLY): + // run_context = ert_run_context_alloc_INIT_ONLY( fs , iactive , runpath_fmt , enkf_main->subst_list , iter ); + // break; + //case(ENSEMBLE_EXPERIMENT): + // run_context = ert_run_context_alloc_ENSEMBLE_EXPERIMENT( fs , iactive , runpath_fmt , enkf_main->subst_list , iter ); + // break; + //case(SMOOTHER_UPDATE): + // run_context = ert_run_context_alloc_SMOOTHER_RUN( fs , fs , iactive , runpath_fmt , enkf_main->subst_list , iter); + // break; + //case(ENKF_ASSIMILATION): + // run_context = ert_run_context_alloc_ENKF_ASSIMILATION( fs , iactive , runpath_fmt , enkf_main->subst_list , init_state_parameter , init_state_dynamic , step1 , step2 , iter); + // break; + //default: + // util_abort("%s: what the fuck? \n",__func__); + //} + + state_map_deselect_matching( enkf_fs_get_state_map( ert_run_context_get_init_fs( run_context )) , + ert_run_context_get_iactive( run_context ), STATE_LOAD_FAILURE | STATE_PARENT_FAILURE); + ert_log_add_fmt_message( 1 , NULL , "===================================================================", false); - if (run_mode == ENKF_ASSIMILATION) + if (ert_run_context_get_mode( run_context ) == ENKF_ASSIMILATION) { + int step1 = ert_run_context_get_step1(run_context); + int step2 = ert_run_context_get_step2(run_context); + printf("Starting forward step: %d -> %d\n", step1 , step2 ); ert_log_add_fmt_message( 1 , NULL , "Forward model: %d -> %d ",step1,step2); - else - ert_log_add_fmt_message( 1 , NULL , "Forward model: %d -> ??? ",step1); - - job_size = bool_vector_count_equal( iactive , true ); + } + + job_size = bool_vector_count_equal( ert_run_context_get_iactive(run_context) , true ); { - pthread_t queue_thread; job_queue_type * job_queue = site_config_get_job_queue(enkf_main->site_config); - + job_queue_manager_type * queue_manager = job_queue_manager_alloc( job_queue ); /* Start the queue */ - if (run_mode != INIT_ONLY) { - if (site_config_has_job_script( enkf_main->site_config )) { - arg_pack_type * queue_args = arg_pack_alloc(); /* This arg_pack will be freed() in the job_que_run_jobs__() */ - arg_pack_append_ptr(queue_args , job_queue); - arg_pack_append_int(queue_args , job_size); - arg_pack_append_bool(queue_args , verbose_queue); - job_queue_reset(job_queue); - pthread_create( &queue_thread , NULL , job_queue_run_jobs__ , queue_args); - } else + if (ert_run_context_get_mode( run_context ) != INIT_ONLY) { + if (site_config_has_job_script( enkf_main->site_config )) + job_queue_manager_start_queue( queue_manager , job_size , verbose_queue ); + else util_exit("No job script specified, can not start any jobs. Use the key JOB_SCRIPT in the config file\n"); } - - { - thread_pool_type * submit_threads = thread_pool_alloc( 4 , true ); - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - runpath_list_type * runpath_list = qc_module_get_runpath_list( enkf_main->qc_module ); - runpath_list_clear( runpath_list ); - - for (iens = 0; iens < active_ens_size; iens++) { - enkf_state_type * enkf_state = enkf_main->ensemble[iens]; - if (bool_vector_iget(iactive , iens)) { - int load_start = step1; - if (step1 > 0) - load_start++; - - enkf_state_init_run(enkf_state , - run_mode , - true , - max_internal_submit , - init_step_parameter , - init_state_parameter, - init_state_dynamic , - load_start , - iter , - step1 , - step2 ); - - runpath_list_add( runpath_list , - iens , - iter , - enkf_state_get_run_path( enkf_state ) , - enkf_state_get_eclbase( enkf_state )); - { - arg_pack_type * arg_pack = arg_pack_alloc( ); // This is discarded by the enkf_state_start_forward_model__() function. */ - - arg_pack_append_ptr( arg_pack , enkf_state ); - arg_pack_append_ptr( arg_pack , fs ); - - thread_pool_add_job(submit_threads , enkf_state_start_forward_model__ , arg_pack); - } - } else - enkf_state_set_inactive( enkf_state ); - } - /* - After this join all directories/files for the simulations - have been set up correctly, and all the jobs have been added - to the job_queue manager. - */ - qc_module_export_runpath_list( enkf_main->qc_module ); - thread_pool_join(submit_threads); - thread_pool_free(submit_threads); - } - if (run_mode != INIT_ONLY) { + enkf_main_submit_jobs( enkf_main , run_context ); + + if (ert_run_context_get_mode(run_context) != INIT_ONLY) { job_queue_submit_complete( job_queue ); ert_log_add_message( 1 , NULL , "All jobs submitted to internal queue - waiting for completion" , false); int max_runtime = analysis_config_get_max_runtime(enkf_main_get_analysis_config( enkf_main )); job_queue_set_max_job_duration(job_queue, max_runtime); - - if (analysis_config_get_stop_long_running(enkf_main_get_analysis_config( enkf_main ))) { - enkf_main_monitor_job_queue( enkf_main ); - } - - pthread_join( queue_thread , NULL ); /* Wait for the job_queue_run_jobs() function to complete. */ + enkf_main_monitor_job_queue( enkf_main ); + + job_queue_manager_wait( queue_manager ); } + job_queue_manager_free( queue_manager ); } /* This should be carefully checked for the situation where only a subset (with offset > 0) of realisations are simulated. */ - if (run_mode != INIT_ONLY) { - bool totalOK = true; + + bool totalOK = true; + if (ert_run_context_get_mode( run_context ) != INIT_ONLY) { for (iens = 0; iens < active_ens_size; iens++) { - if (bool_vector_iget(iactive , iens)) { - run_status_type run_status = enkf_state_get_simple_run_status( enkf_main->ensemble[iens] ); + if (bool_vector_iget(ert_run_context_get_iactive(run_context) , iens)) { + run_arg_type * run_arg = ert_run_context_iens_get_arg( run_context , iens ); + run_status_type run_status = run_arg_get_run_status( run_arg ); switch (run_status) { case JOB_RUN_FAILURE: - enkf_main_report_run_failure( enkf_main , iens ); - bool_vector_iset(iactive, iens, false); + enkf_main_report_run_failure( enkf_main , run_arg ); + bool_vector_iset(ert_run_context_get_iactive( run_context ), iens, false); break; case JOB_LOAD_FAILURE: - enkf_main_report_load_failure( enkf_main , iens ); - bool_vector_iset(iactive, iens, false); + enkf_main_report_load_failure( enkf_main , run_arg ); + bool_vector_iset(ert_run_context_get_iactive( run_context ), iens, false); break; case JOB_RUN_OK: break; @@ -1646,14 +1722,15 @@ static bool enkf_main_run_step(enkf_main_type * enkf_main , } totalOK = totalOK && ( run_status == JOB_RUN_OK ); } + } - enkf_fs_fsync( enkf_main->dbase ); + enkf_fs_fsync( ert_run_context_get_result_fs( run_context ) ); if (totalOK) ert_log_add_fmt_message( 1 , NULL , "All jobs complete and data loaded."); - - return totalOK; } else - return false; + totalOK = false; + + return totalOK; } } @@ -1709,17 +1786,16 @@ void * enkf_main_get_enkf_config_node_type(const ensemble_config_type * ensemble */ -void enkf_main_init_run( enkf_main_type * enkf_main, const bool_vector_type * iactive , run_mode_type run_mode , init_mode_enum init_mode) { +void enkf_main_init_run( enkf_main_type * enkf_main, const ert_run_context_type * run_context) { { const ext_joblist_type * joblist = site_config_get_installed_jobs( enkf_main->site_config); - model_config_set_enkf_sched( enkf_main->model_config , joblist , run_mode ); + model_config_set_enkf_sched( enkf_main->model_config , joblist , ert_run_context_get_mode( run_context )); } - enkf_main_init_internalization(enkf_main , run_mode); - + enkf_main_init_internalization(enkf_main , ert_run_context_get_mode( run_context )); { stringlist_type * param_list = ensemble_config_alloc_keylist_from_var_type( enkf_main->ensemble_config , PARAMETER ); - enkf_main_initialize_from_scratch_with_bool_vector(enkf_main , param_list , iactive , init_mode ); + enkf_main_initialize_from_scratch_with_bool_vector(enkf_main , param_list , ert_run_context_get_iactive( run_context ) , ert_run_context_get_init_mode( run_context )); stringlist_free( param_list ); } } @@ -1727,24 +1803,32 @@ void enkf_main_init_run( enkf_main_type * enkf_main, const bool_vector_type * ia -void enkf_main_run_exp(enkf_main_type * enkf_main , - bool_vector_type * iactive , - bool simulate , - int init_step_parameters , - int start_report , - state_enum start_state) { - - init_mode_enum init_mode = INIT_CONDITIONAL; - run_mode_type run_mode = simulate ? ENSEMBLE_EXPERIMENT : INIT_ONLY; +void enkf_main_run_exp(enkf_main_type * enkf_main , + bool_vector_type * iactive , + bool simulate ) { - enkf_main_init_run( enkf_main , iactive , run_mode , init_mode); - { - int load_start = start_report; - state_enum init_state_parameter = start_state; - state_enum init_state_dynamic = start_state; - if (enkf_main_run_step(enkf_main , run_mode , iactive , load_start , init_step_parameters , init_state_parameter , init_state_dynamic , 0, start_report , -1)) - enkf_main_run_post_workflow(enkf_main); - } + ert_run_context_type * run_context; + init_mode_type init_mode = INIT_CONDITIONAL; + int iter = 0; + + if (simulate) + run_context = enkf_main_alloc_ert_run_context_ENSEMBLE_EXPERIMENT(enkf_main , + enkf_main_get_fs( enkf_main ) , + iactive , + init_mode , + iter ); + else + run_context = enkf_main_alloc_ert_run_context_INIT_ONLY( enkf_main , + enkf_main_get_fs( enkf_main ) , + iactive , + init_mode , + iter ); + + enkf_main_init_run( enkf_main , run_context ); + if (enkf_main_run_step(enkf_main , run_context)) + enkf_main_run_post_workflow(enkf_main); + + ert_run_context_free( run_context ); } @@ -1757,10 +1841,9 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , analysis_config_type * analysis_config = enkf_main_get_analysis_config( enkf_main ); if (!analysis_config_get_module_option( analysis_config , ANALYSIS_ITERABLE)) { - init_mode_enum init_mode = INIT_CONDITIONAL; + init_mode_type init_mode = INIT_CONDITIONAL; bool rerun = analysis_config_get_rerun( enkf_main->analysis_config ); int rerun_start = analysis_config_get_rerun_start( enkf_main->analysis_config ); - enkf_main_init_run( enkf_main , iactive , ENKF_ASSIMILATION , init_mode); { bool analyzed_start = false; bool prev_enkf_on; @@ -1768,6 +1851,8 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , const int num_nodes = enkf_sched_get_num_nodes(enkf_sched); const int start_inode = enkf_sched_get_node_index(enkf_sched , start_report); int inode; + ert_run_context_type * run_context; + if (start_state == ANALYZED) analyzed_start = true; @@ -1779,6 +1864,7 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , prev_enkf_on = analyzed_start; for (inode = start_inode; inode < num_nodes; inode++) { const enkf_sched_node_type * node = enkf_sched_iget_node(enkf_sched , inode); + int iter = 0; state_enum init_state_parameter; state_enum init_state_dynamic; int init_step_parameter; @@ -1813,14 +1899,21 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , load_start = report_step1; } - if (load_start > 0) - load_start++; - - enkf_main_run_step(enkf_main , ENKF_ASSIMILATION , iactive , load_start , init_step_parameter , - init_state_parameter , init_state_dynamic , 0, report_step1 , report_step2); + run_context = enkf_main_alloc_ert_run_context_ENKF_ASSIMILATION( enkf_main, + enkf_main_get_fs( enkf_main ) , + iactive , + init_mode , + init_state_parameter, + init_state_dynamic , + report_step1 , // init_step parameter + report_step2 , + iter ); + + enkf_main_init_run( enkf_main , run_context ); + enkf_main_run_step(enkf_main , run_context); { - enkf_fs_type * fs = enkf_main_get_fs(enkf_main); - state_map_type * state_map = enkf_fs_get_state_map(fs); + enkf_fs_type * result_fs = ert_run_context_get_result_fs( run_context ); + state_map_type * state_map = enkf_fs_get_state_map(result_fs); const analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); int active_ens_size = state_map_count_matching(state_map , STATE_HAS_DATA); @@ -1835,7 +1928,7 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , else stride = 0; - step_list = enkf_main_update_alloc_step_list( enkf_main , load_start , report_step2 , stride ); + step_list = enkf_main_update_alloc_step_list( enkf_main , ert_run_context_get_load_start(run_context) , report_step2 , stride ); enkf_main_assimilation_update(enkf_main , step_list); int_vector_free( step_list ); @@ -1856,9 +1949,18 @@ void enkf_main_run_assimilation(enkf_main_type * enkf_main , } -bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_enum init_mode, int iter) { - enkf_main_init_run( enkf_main , iactive , ENSEMBLE_EXPERIMENT , init_mode); - return enkf_main_run_step( enkf_main , ENSEMBLE_EXPERIMENT , iactive , 0 , 0 , ANALYZED , UNDEFINED , iter, 0 , 0 ); +bool enkf_main_run_simple_step(enkf_main_type * enkf_main , bool_vector_type * iactive , init_mode_type init_mode, int iter) { + bool run_ok; + ert_run_context_type * run_context = enkf_main_alloc_ert_run_context_ENSEMBLE_EXPERIMENT( enkf_main , + enkf_main_get_fs( enkf_main ) , + iactive , + init_mode , + iter ); + enkf_main_init_run( enkf_main , run_context ); + run_ok = enkf_main_run_step( enkf_main , run_context ); + ert_run_context_free( run_context ); + + return run_ok; } @@ -1887,22 +1989,21 @@ void enkf_main_run_smoother(enkf_main_type * enkf_main , const char * target_fs_ fprintf(stderr,"** ERROR: The normal smoother should not be combined with an iterable analysis module\n"); } - -static bool enkf_main_run_simulation_and_postworkflow(enkf_main_type * enkf_main, int iteration_number, bool_vector_type * iactive) { + +static bool enkf_main_run_simulation_and_postworkflow(enkf_main_type * enkf_main, const ert_run_context_type * run_context) { bool ret = true; - const int step1 = 0; analysis_config_type * analysis_config = enkf_main_get_analysis_config(enkf_main); const int min_realizations = analysis_config_get_min_realisations(analysis_config); - - printf("Running simulation iteration %d\n", iteration_number); - bool total_ok = enkf_main_run_step(enkf_main, ENSEMBLE_EXPERIMENT , iactive , step1 , step1 , FORECAST , FORECAST , iteration_number, step1 , -1); - - if (total_ok || (bool_vector_count_equal(iactive, true) >= min_realizations)) + + bool total_ok = enkf_main_run_step(enkf_main , run_context); + + if (total_ok || (bool_vector_count_equal(ert_run_context_get_iactive( run_context ), true) >= min_realizations)) enkf_main_run_post_workflow(enkf_main); else { - fprintf(stderr,"Simulation in iteration %d failed, stopping Iterated Ensemble Smoother\n", iteration_number); + fprintf(stderr,"Simulation in iteration %d failed, stopping Iterated Ensemble Smoother\n", ert_run_context_get_iter( run_context )); ret = false; } + return ret; } @@ -1958,8 +2059,10 @@ void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations_to } { //Iteration 0 - enkf_main_init_run(enkf_main , iactive , ENSEMBLE_EXPERIMENT , INIT_FORCE); - enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration, iactive); + ert_run_context_type * run_context = NULL; + enkf_main_init_run(enkf_main , run_context); + enkf_main_run_simulation_and_postworkflow(enkf_main, run_context); + ert_run_context_free( run_context ); } { // Iteration 1 - num_iterations [iteration 1, num iterations] @@ -1968,11 +2071,13 @@ void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations_to current_iteration = 1; while ((current_iteration <= num_iterations_to_run) && (num_tries < num_retries_per_iteration)) { + ert_run_context_type * run_context = NULL; + const char * target_fs_name = analysis_iter_config_iget_case( iter_config , current_iteration ); if (enkf_main_run_analysis(enkf_main, target_fs_name, current_iteration)) { enkf_main_select_fs(enkf_main, target_fs_name); - if (!enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration, iactive)) + if (!enkf_main_run_simulation_and_postworkflow(enkf_main, run_context )) break; num_tries = 0; ++current_iteration; @@ -1983,9 +2088,12 @@ void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations_to enkf_fs_decref(target_fs); ++num_tries; - if (!enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration-1, iactive)) + if (!enkf_main_run_simulation_and_postworkflow(enkf_main, run_context )) + //if (!enkf_main_run_simulation_and_postworkflow(enkf_main, current_iteration-1, iactive)) break; } + + ert_run_context_free( run_context ); } } @@ -1995,6 +2103,39 @@ void enkf_main_run_iterated_ES(enkf_main_type * enkf_main, int num_iterations_to } +ert_run_context_type * enkf_main_alloc_ert_run_context_ENSEMBLE_EXPERIMENT(const enkf_main_type * enkf_main , enkf_fs_type * fs , const bool_vector_type * iactive , init_mode_type init_mode , int iter) { + return ert_run_context_alloc_ENSEMBLE_EXPERIMENT( fs , iactive , model_config_get_runpath_fmt( enkf_main->model_config ) , enkf_main->subst_list , init_mode , iter ); +} + + +ert_run_context_type * enkf_main_alloc_ert_run_context_INIT_ONLY(const enkf_main_type * enkf_main , enkf_fs_type * fs , const bool_vector_type * iactive , init_mode_type init_mode , int iter) { + return ert_run_context_alloc_INIT_ONLY( fs , iactive , model_config_get_runpath_fmt( enkf_main->model_config ) , enkf_main->subst_list , init_mode , iter ); +} + +ert_run_context_type * enkf_main_alloc_ert_run_context_ENKF_ASSIMILATION( const enkf_main_type * enkf_main , + enkf_fs_type * fs , + const bool_vector_type * iactive , + init_mode_type init_mode , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + int iter) { + + return ert_run_context_alloc_ENKF_ASSIMILATION( enkf_main_get_fs( enkf_main ) , + iactive , + model_config_get_runpath_fmt( enkf_main->model_config ) , + enkf_main->subst_list , + init_mode , + init_state_parameter, + init_state_dynamic , + step1 , // init_step parameter + step2 , + iter ); + +} + + /** This function creates a local_config file corresponding to the @@ -2489,14 +2630,6 @@ static void enkf_main_invalidate_cache( enkf_main_type * enkf_main ) { } -/* -void enkf_main_create_fs( enkf_main_type * enkf_main , const char * fs_path) { - fs_driver_impl driver_id = model_config_get_dbase_type( enkf_main->model_config ); - void * arg = NULL; - - enkf_fs_create_fs( fs_path , driver_id , arg ); -} -*/ @@ -3367,34 +3500,32 @@ void enkf_main_run_workflows( enkf_main_type * enkf_main , const stringlist_type void enkf_main_load_from_forward_model_from_gui(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, enkf_fs_type * fs){ - const int ens_size = enkf_main_get_ensemble_size( enkf_main ); - stringlist_type ** realizations_msg_list = util_calloc( ens_size , sizeof * realizations_msg_list ); - int iens = 0; - for (; iens < ens_size; ++iens) { - realizations_msg_list[iens] = stringlist_alloc_new(); - } - enkf_main_load_from_forward_model_with_fs(enkf_main, iter , iactive, realizations_msg_list, fs); - free(realizations_msg_list); + const int ens_size = enkf_main_get_ensemble_size( enkf_main ); + stringlist_type ** realizations_msg_list = util_calloc( ens_size , sizeof * realizations_msg_list ); + int iens = 0; + for (; iens < ens_size; ++iens) { + realizations_msg_list[iens] = stringlist_alloc_new(); + } + enkf_main_load_from_forward_model_with_fs(enkf_main, iter , iactive, realizations_msg_list, fs); + free(realizations_msg_list); } -void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list){ - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - enkf_main_load_from_forward_model_with_fs(enkf_main, iter, iactive, realizations_msg_list, fs); +void enkf_main_load_from_forward_model(enkf_main_type * enkf_main, int iter , const bool_vector_type * iactive, stringlist_type ** realizations_msg_list){ + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + enkf_main_load_from_forward_model_with_fs(enkf_main, iter, iactive, realizations_msg_list, fs); } -void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs) { + +void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int iter , const bool_vector_type * iactive, stringlist_type ** realizations_msg_list, enkf_fs_type * fs) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); - int step1 = 0; - int step2 = -1; /** Observe that for the summary data it will load all the available data anyway. */ - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; int result[ens_size]; + model_config_type * model_config = enkf_main->model_config; + ert_run_context_type * run_context = ert_run_context_alloc_ENSEMBLE_EXPERIMENT( fs , iactive , model_config_get_runpath_fmt( model_config ) , enkf_main->subst_list , INIT_NONE , iter ); arg_pack_type ** arg_list = util_calloc( ens_size , sizeof * arg_list ); thread_pool_type * tp = thread_pool_alloc( 4 , true ); /* num_cpu - HARD coded. */ - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - int iens = 0; for (; iens < ens_size; ++iens) { result[iens] = 0; @@ -3403,16 +3534,12 @@ void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int i if (bool_vector_iget(iactive, iens)) { enkf_state_type * enkf_state = enkf_main_iget_state( enkf_main , iens ); - arg_pack_append_ptr( arg_pack , enkf_state); /* 0: */ - arg_pack_append_ptr( arg_pack , fs ); /* 1: */ - arg_pack_append_int( arg_pack , step1 ); /* 2: This will be the load start parameter for the run_info struct. */ - arg_pack_append_int( arg_pack , step1 ); /* 3: Step1 */ - arg_pack_append_int( arg_pack , step2 ); /* 4: Step2 For summary data it will load the whole goddamn thing anyway.*/ - arg_pack_append_bool( arg_pack , true ); /* 5: Interactive */ - arg_pack_append_ptr(arg_pack, realizations_msg_list[iens]); /* 6: List of interactive mode messages. */ - arg_pack_append_bool( arg_pack, true ); /* 7: Manual load */ - arg_pack_append_int( arg_pack , iter ); /* 8: Iteration number */ - arg_pack_append_ptr(arg_pack, &result[iens]); /* 9: Result */ + arg_pack_append_ptr( arg_pack , enkf_state); /* 0: */ + arg_pack_append_ptr( arg_pack , ert_run_context_iens_get_arg( run_context , iens )); /* 1: */ + arg_pack_append_bool( arg_pack , true ); /* 2: Interactive */ + arg_pack_append_ptr(arg_pack, realizations_msg_list[iens]); /* 3: List of interactive mode messages. */ + arg_pack_append_bool( arg_pack, true ); /* 4: Manual load */ + arg_pack_append_ptr(arg_pack, &result[iens]); /* 5: Result */ thread_pool_add_job( tp , enkf_state_load_from_forward_model_mt , arg_pack); } @@ -3432,6 +3559,7 @@ void enkf_main_load_from_forward_model_with_fs(enkf_main_type * enkf_main, int i arg_pack_free(arg_list[iens]); } free( arg_list ); + ert_run_context_free( run_context ); } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c index 385e0b1e08..323f45a478 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main_jobs.c @@ -162,7 +162,7 @@ void * enkf_main_ensemble_run_JOB( void * self , const stringlist_type * args ) bool_vector_type * iactive = alloc_iactive_vector_from_range(args, 0, stringlist_get_size(args), ens_size); bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp( enkf_main , iactive , true , 0 , 0 , ANALYZED); + enkf_main_run_exp( enkf_main , iactive , true ); bool_vector_free(iactive); return NULL; } @@ -536,43 +536,34 @@ static void enkf_main_export_runpath_file(enkf_main_type * enkf_main, const model_config_type * model_config = enkf_main_get_model_config(enkf_main); const char * basename_fmt = ecl_config_get_eclbase(ecl_config); const char * runpath_fmt = model_config_get_runpath_as_char(model_config); + const qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); - - runpath_list_type * runpath_list = runpath_list_alloc(); - char * cwd = util_alloc_cwd(); + runpath_list_type * runpath_list = runpath_list_alloc( qc_module_get_runpath_list_file( qc_module )); for (int iter = 0; iter < int_vector_size(iterations); ++iter) { for (int iens = 0; iens < int_vector_size(realizations); ++iens) { int iter_value = int_vector_iget(iterations, iter); int iens_value = int_vector_iget(realizations, iens); - char * basename = NULL; + char * basename; + char * runpath; + if (basename_fmt) basename = util_alloc_sprintf(basename_fmt, iens_value); else basename = util_alloc_sprintf("--%d", iens_value); - char * runpath = NULL; - if (model_config_runpath_requires_iter(model_config)) { + + if (model_config_runpath_requires_iter(model_config)) runpath = util_alloc_sprintf(runpath_fmt, iens_value, iter_value); - } else runpath = util_alloc_sprintf(runpath_fmt, iens_value); - + runpath_list_add(runpath_list, iens_value, iter_value, runpath, basename); free(basename); free(runpath); } } - - { - qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); - const char * runpath_file_name = qc_module_get_runpath_list_file(qc_module); - FILE * file_stream = util_mkdir_fopen(runpath_file_name, "w"); - runpath_list_fprintf(runpath_list, file_stream); - fclose(file_stream); - } - - free(cwd); + runpath_list_fprintf(runpath_list); runpath_list_free(runpath_list); } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c b/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c index 3d19d2ffc4..6bdda5dae7 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_main_manage_fs.c @@ -95,13 +95,13 @@ static void * enkf_main_initialize_from_scratch_mt(void * void_arg) { enkf_main_type * enkf_main = arg_pack_iget_ptr( arg_pack , 0); const stringlist_type * param_list = arg_pack_iget_const_ptr( arg_pack , 1 ); int iens = arg_pack_iget_int( arg_pack , 2 ); - init_mode_enum init_mode = arg_pack_iget_int( arg_pack , 3 ); + init_mode_type init_mode = arg_pack_iget_int( arg_pack , 3 ); enkf_state_type * state = enkf_main_iget_state( enkf_main , iens); enkf_state_initialize( state , enkf_main_get_fs( enkf_main ) , param_list , init_mode); return NULL; } -void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_main , const stringlist_type * param_list ,const bool_vector_type * iens_mask , init_mode_enum init_mode) { +void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_main , const stringlist_type * param_list ,const bool_vector_type * iens_mask , init_mode_type init_mode) { int num_cpu = 4; int ens_size = enkf_main_get_ensemble_size( enkf_main ); thread_pool_type * tp = thread_pool_alloc( num_cpu , true ); @@ -129,7 +129,7 @@ void enkf_main_initialize_from_scratch_with_bool_vector(enkf_main_type * enkf_ma thread_pool_free( tp ); } -void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , const stringlist_type * param_list , int iens1 , int iens2, init_mode_enum init_mode) { +void enkf_main_initialize_from_scratch(enkf_main_type * enkf_main , const stringlist_type * param_list , int iens1 , int iens2, init_mode_type init_mode) { int iens; int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iens_mask = bool_vector_alloc(ens_size,false); @@ -422,7 +422,8 @@ static void enkf_main_create_fs( const enkf_main_type * enkf_main , const char * enkf_fs_create_fs( new_mount_point, model_config_get_dbase_type( enkf_main->model_config ) , - model_config_get_dbase_args( enkf_main->model_config )); + model_config_get_dbase_args( enkf_main->model_config ) , + false ); free( new_mount_point ); } diff --git a/ThirdParty/Ert/devel/libenkf/src/enkf_state.c b/ThirdParty/Ert/devel/libenkf/src/enkf_state.c index 7fa1bd3e44..cbd93279ac 100644 --- a/ThirdParty/Ert/devel/libenkf/src/enkf_state.c +++ b/ThirdParty/Ert/devel/libenkf/src/enkf_state.c @@ -72,40 +72,12 @@ #include #include #include +#include #define ENKF_STATE_TYPE_ID 78132 -/** - This struct is a pure utility structure used to pack the various - bits and pieces of information needed to start, monitor, and load - back results from the forward model simulations. - - Typcially the values in this struct are set from the enkf_main - object before a forward_step starts. -*/ - -typedef struct run_info_struct { - bool __ready; /* An attempt to check the internal state - not active yet. */ - bool active; /* Is this state object active at all - used for instance in ensemble experiments where only some of the members are integrated. */ - int init_step_parameters; /* The report step we initialize parameters from - will often be equal to step1, but can be different. */ - state_enum init_state_parameter; /* Whether we should init from a forecast or an analyzed state - parameters. */ - state_enum init_state_dynamic; /* Whether we should init from a forecast or an analyzed state - dynamic state variables. */ - int max_internal_submit; /* How many times the enkf_state object should try to resubmit when the queueu has said everything is OK - but the load fails. */ - int num_internal_submit; - int load_start; /* When loading back results - start at this step. */ - int step1; /* The forward model is integrated: step1 -> step2 */ - int step2; - int iter; - char * run_path; /* The currently used runpath - is realloced / freed for every step. */ - run_mode_type run_mode; /* What type of run this is */ - int queue_index; /* The job will in general have a different index in the queue than the iens number. */ - /******************************************************************/ - /* Return value - set by the called routine!! */ - run_status_type run_status; -} run_info_type; - /** @@ -146,7 +118,6 @@ struct enkf_state_struct { - which will describe initialization of ECLIPSE (EQUIL or RESTART).*/ ensemble_config_type * ensemble_config; /* The config nodes for the enkf_node objects contained in node_hash. */ - run_info_type * run_info; /* Various pieces of information needed by the enkf_state object when running the forward model. Updated for each report step.*/ shared_info_type * shared_info; /* Pointers to shared objects which is needed by the enkf_state object (read only). */ member_config_type * my_config; /* Private config information for this member; not updated during a simulation. */ rng_type * rng; @@ -155,105 +126,8 @@ struct enkf_state_struct { /*****************************************************************/ -static void run_info_set_run_path(run_info_type * run_info , int iens , path_fmt_type * run_path_fmt, const subst_list_type * state_subst_list) { - util_safe_free(run_info->run_path); - { - char * tmp1 = path_fmt_alloc_path(run_path_fmt , false , iens, run_info->iter); /* 1: Replace first %d with iens, if a second %d replace with iter */ - char * tmp2 = subst_list_alloc_filtered_string( state_subst_list , tmp1 ); /* 2: Filter out various magic strings like and . */ - run_info->run_path = util_alloc_abs_path( tmp2 ); /* 3: Ensure that the path is absolute. */ - free( tmp1 ); - free( tmp2 ); - } -} - - - -/** - This function sets the run_info parameters. This is typically called - (via an enkf_state__ routine) by the external scope handling the forward model. - - When this initialization code has been run we are certain that the - enkf_state object has all the information it needs to "run itself" - forward. - - - This function inits the necessary fields in the run_info structure - to be able to use the xxx_internalize_xxx() functions. Observe that - trying actually run after the run_info structure has only been - initialized here will lead to hard failure. - - The inits performed are essential for running, not only for the - internalizing. -*/ - - -static void run_info_init_for_load(run_info_type * run_info , - int load_start, - int step1, - int step2, - int iens, - int iter , - path_fmt_type * run_path_fmt , - const subst_list_type * state_subst_list) { - run_info->step1 = step1; - run_info->step2 = step2; - run_info->load_start = load_start; - run_info->iter = iter; - run_info_set_run_path(run_info , iens , run_path_fmt , state_subst_list ); -} - - - -static void run_info_set(run_info_type * run_info , - run_mode_type run_mode , - bool active , - int max_internal_submit , - int init_step_parameters , - state_enum init_state_parameter , - state_enum init_state_dynamic , - int load_start , - int step1 , - int step2 , - int iter , - int iens , - path_fmt_type * run_path_fmt , - const subst_list_type * state_subst_list) { - - run_info->active = active; - run_info->init_step_parameters = init_step_parameters; - run_info->init_state_parameter = init_state_parameter; - run_info->init_state_dynamic = init_state_dynamic; - run_info->run_status = JOB_NOT_STARTED; - run_info->__ready = true; - run_info->run_mode = run_mode; - run_info->max_internal_submit = max_internal_submit; - run_info->num_internal_submit = 0; - run_info_init_for_load( run_info , load_start , step1 , step2 , iens , iter , run_path_fmt , state_subst_list); -} - - -static run_info_type * run_info_alloc() { - run_info_type * run_info = util_malloc(sizeof * run_info ); - run_info->run_path = NULL; - return run_info; -} - - -static void run_info_free(run_info_type * run_info) { - util_safe_free(run_info->run_path); - free(run_info); -} - - -static void run_info_complete_run(run_info_type * run_info) { - if (run_info->run_status == JOB_RUN_OK) { - util_safe_free(run_info->run_path); - run_info->run_path = NULL; - } -} - +static UTIL_SAFE_CAST_FUNCTION( enkf_state , ENKF_STATE_TYPE_ID ) -/*****************************************************************/ static shared_info_type * shared_info_alloc(const site_config_type * site_config , model_config_type * model_config, const ecl_config_type * ecl_config , ert_templates_type * templates) { shared_info_type * shared_info = util_malloc(sizeof * shared_info ); @@ -284,7 +158,7 @@ static void shared_info_free(shared_info_type * shared_info) { /** Helper classes complete - starting on the enkf_state proper object. */ /*****************************************************************/ -void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs , const stringlist_type * param_list, init_mode_enum init_mode) { +void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs , const stringlist_type * param_list, init_mode_type init_mode) { if (init_mode != INIT_NONE) { int iens = enkf_state_get_iens( enkf_state ); state_map_type * state_map = enkf_fs_get_state_map( fs ); @@ -315,23 +189,6 @@ void enkf_state_initialize(enkf_state_type * enkf_state , enkf_fs_type * fs , co -/** - The run_info->run_path variable is in general NULL. It is given a - valid value before a simulation starts, holds on to that value - through the simulation, and is then freed (and set to NULL) when - the simulation ends. - - The *ONLY* point when an external call to this function should give - anything is when the forward model has failed, then - run_info_complete_run() has left the run_path intact. -*/ - -const char * enkf_state_get_run_path(const enkf_state_type * enkf_state) { - return enkf_state->run_info->run_path; -} - - - /* void enkf_state_set_iens(enkf_state_type * enkf_state , int iens) { @@ -348,7 +205,6 @@ member_config_type * enkf_state_get_member_config(const enkf_state_type * enkf_s } -static UTIL_SAFE_CAST_FUNCTION( enkf_state , ENKF_STATE_TYPE_ID ) static void enkf_state_add_subst_kw(enkf_state_type * enkf_state , const char * kw , const char * value , const char * doc_string) { @@ -476,7 +332,6 @@ enkf_state_type * enkf_state_alloc(int iens, enkf_state->ensemble_config = ensemble_config; enkf_state->shared_info = shared_info_alloc(site_config , model_config , ecl_config , templates); - enkf_state->run_info = run_info_alloc(); enkf_state->node_hash = hash_alloc(); enkf_state->restart_kw_list = stringlist_alloc_new(); @@ -546,7 +401,7 @@ enkf_state_type * enkf_state_alloc(int iens, -static bool enkf_state_has_node(const enkf_state_type * enkf_state , const char * node_key) { +bool enkf_state_has_node(const enkf_state_type * enkf_state , const char * node_key) { bool has_node = hash_has_key(enkf_state->node_hash , node_key); return has_node; } @@ -603,17 +458,16 @@ const char * enkf_state_get_eclbase( const enkf_state_type * enkf_state ) { } -static ecl_sum_type * enkf_state_load_ecl_sum(const enkf_state_type * enkf_state , stringlist_type * messages , int * result) { +static ecl_sum_type * enkf_state_load_ecl_sum(const enkf_state_type * enkf_state , const run_arg_type * run_arg , stringlist_type * messages , int * result) { const ecl_config_type * ecl_config = enkf_state->shared_info->ecl_config; if (ecl_config_active( ecl_config )) { - const run_info_type * run_info = enkf_state->run_info; const bool fmt_file = ecl_config_get_formatted(ecl_config); const char * eclbase = enkf_state_get_eclbase( enkf_state ); stringlist_type * data_files = stringlist_alloc_new(); - char * header_file = ecl_util_alloc_exfilename(run_info->run_path , eclbase , ECL_SUMMARY_HEADER_FILE , fmt_file , -1); - char * unified_file = ecl_util_alloc_exfilename(run_info->run_path , eclbase , ECL_UNIFIED_SUMMARY_FILE , fmt_file , -1); + char * header_file = ecl_util_alloc_exfilename(run_arg_get_runpath(run_arg) , eclbase , ECL_SUMMARY_HEADER_FILE , fmt_file , -1); + char * unified_file = ecl_util_alloc_exfilename(run_arg_get_runpath(run_arg) , eclbase , ECL_UNIFIED_SUMMARY_FILE , fmt_file , -1); ecl_sum_type * summary = NULL; /* Should we load from a unified summary file, or from several non-unified files? */ @@ -623,11 +477,11 @@ static ecl_sum_type * enkf_state_load_ecl_sum(const enkf_state_type * enkf_state else { /* Use several non unified files. */ /* Bypassing the query to model_config_load_results() */ - int report_step = run_info->load_start; + int report_step = run_arg_get_load_start( run_arg ); if (report_step == 0) report_step++; // Ignore looking for the .S0000 summary file (it does not exist). while (true) { - char * summary_file = ecl_util_alloc_exfilename(run_info->run_path , eclbase , ECL_SUMMARY_FILE , fmt_file , report_step); + char * summary_file = ecl_util_alloc_exfilename(run_arg_get_runpath( run_arg ) , eclbase , ECL_SUMMARY_FILE , fmt_file , report_step); if (summary_file != NULL) stringlist_append_owned_ref( data_files , summary_file); @@ -638,7 +492,7 @@ static ecl_sum_type * enkf_state_load_ecl_sum(const enkf_state_type * enkf_state */ break; - if ((run_info->run_mode == ENKF_ASSIMILATION) && (report_step == run_info->step2)) + if ((run_arg_get_run_mode( run_arg ) == ENKF_ASSIMILATION) && (run_arg_get_step2( run_arg ) == report_step)) break; report_step++; @@ -708,23 +562,23 @@ static bool enkf_state_report_step_compatible(const enkf_state_type * enkf_state -static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enkf_state , enkf_fs_type * fs , const model_config_type * model_config , int * result, bool interactive , stringlist_type * msg_list) { +static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enkf_state , run_arg_type * run_arg , const model_config_type * model_config , int * result, bool interactive , stringlist_type * msg_list) { bool load_summary = ensemble_config_has_impl_type(enkf_state->ensemble_config, SUMMARY); if (load_summary) { - const run_info_type * run_info = enkf_state->run_info; - int load_start = run_info->load_start; + int load_start = run_arg_get_load_start( run_arg ); if (load_start == 0) /* Do not attempt to load the "S0000" summary results. */ load_start++; { /* Looking for summary files on disk, and loading them. */ - ecl_sum_type * summary = enkf_state_load_ecl_sum( enkf_state , msg_list , result ); + ecl_sum_type * summary = enkf_state_load_ecl_sum( enkf_state , run_arg , msg_list , result ); + enkf_fs_type * result_fs = run_arg_get_result_fs( run_arg ); /** OK - now we have actually loaded the ecl_sum instance, or ecl_sum == NULL. */ if (summary != NULL) { int_vector_type * time_index; { - time_map_type * time_map = enkf_fs_get_time_map( fs ); + time_map_type * time_map = enkf_fs_get_time_map( result_fs ); time_map_summary_update( time_map , summary ); time_index = time_map_alloc_index_map( time_map , summary ); } @@ -756,9 +610,9 @@ static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enk if (enkf_node_get_var_type(node) == DYNAMIC_RESULT && enkf_node_get_impl_type(node) == SUMMARY) { { - enkf_node_try_load_vector( node , fs , iens , FORECAST ); // Ensure that what is currently on file is loaded before we update. - if (enkf_node_forward_load_vector( node , run_info->run_path , summary , NULL , time_index , iens)) - enkf_node_store_vector( node , fs , iens , FORECAST ); + enkf_node_try_load_vector( node , result_fs , iens , FORECAST ); // Ensure that what is currently on file is loaded before we update. + if (enkf_node_forward_load_vector( node , run_arg_get_runpath( run_arg ) , summary , NULL , time_index , iens)) + enkf_node_store_vector( node , result_fs , iens , FORECAST ); else { *result |= LOAD_FAILURE; ert_log_add_fmt_message( 3 , NULL , "[%03d:----] Failed to load data for vector node:%s.",iens , enkf_node_get_key( node )); @@ -775,7 +629,7 @@ static bool enkf_state_internalize_dynamic_eclipse_results(enkf_state_type * enk int_vector_free( time_index ); return true; } else { - fprintf(stderr , "** Warning: could not load ECLIPSE summary data from %s - this will probably fail later ...\n" , enkf_state->run_info->run_path); + fprintf(stderr , "** Warning: could not load ECLIPSE summary data from %s - this will probably fail later ...\n" , run_arg_get_runpath( run_arg )); return false; } } @@ -813,28 +667,27 @@ static char * __realloc_static_kw(char * kw , int occurence) { static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , - enkf_fs_type * fs , + run_arg_type * run_arg , const model_config_type * model_config , - int load_start , int last_report , int * result, bool interactive , stringlist_type * msg_list) { { - run_info_type * run_info = enkf_state->run_info; member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); stringlist_type * keylist_GEN_DATA = ensemble_config_alloc_keylist_from_impl_type(enkf_state->ensemble_config , GEN_DATA ); - + enkf_fs_type * result_fs = run_arg_get_result_fs( run_arg ); + for (int ikey=0; ikey < stringlist_get_size( keylist_GEN_DATA ); ikey++) { enkf_node_type * node = enkf_state_get_node( enkf_state , stringlist_iget( keylist_GEN_DATA , ikey)); if (enkf_node_vector_storage(node)) { util_abort("%s: holy shit - vector storage not correctly implemented for GEN_DATA\n",__func__); - enkf_node_try_load_vector( node , fs , iens , FORECAST); - if (enkf_node_forward_load_vector( node , run_info->run_path , NULL , NULL , NULL , iens)) { - enkf_node_store_vector( node , fs , iens , FORECAST ); + enkf_node_try_load_vector( node , result_fs , iens , FORECAST); + if (enkf_node_forward_load_vector( node , run_arg_get_runpath( run_arg ) , NULL , NULL , NULL , iens)) { + enkf_node_store_vector( node , result_fs , iens , FORECAST ); if (interactive) enkf_state_log_GEN_DATA_load( node , 0 , msg_list ); } else { @@ -846,16 +699,16 @@ static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , } else { - for (int report_step = load_start; report_step <= last_report; report_step++) { + for (int report_step = run_arg_get_load_start( run_arg ); report_step <= last_report; report_step++) { if (enkf_node_internalize(node , report_step)) { if (enkf_node_has_func(node , forward_load_func)) { - if (enkf_node_forward_load(node , run_info->run_path , NULL , NULL , report_step , iens )) { + if (enkf_node_forward_load(node , run_arg_get_runpath( run_arg ) , NULL , NULL , report_step , iens )) { node_id_type node_id = {.report_step = report_step , .iens = iens , .state = FORECAST }; - enkf_node_store( node , fs, false , node_id ); + enkf_node_store( node , result_fs, false , node_id ); if (interactive) enkf_state_log_GEN_DATA_load( node , report_step , msg_list ); @@ -886,7 +739,7 @@ static void enkf_state_internalize_GEN_DATA(enkf_state_type * enkf_state , */ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , - enkf_fs_type * fs , + run_arg_type * run_arg , const model_config_type * model_config , int report_step , bool store_vectors , @@ -895,9 +748,9 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , stringlist_type * msg_list) { shared_info_type * shared_info = enkf_state->shared_info; const ecl_config_type * ecl_config = shared_info->ecl_config; + enkf_fs_type * result_fs = run_arg_get_result_fs( run_arg ); if (ecl_config_active( ecl_config )) { member_config_type * my_config = enkf_state->my_config; - run_info_type * run_info = enkf_state->run_info; const int iens = member_config_get_iens( my_config ); const bool fmt_file = ecl_config_get_formatted( ecl_config ); const bool unified = ecl_config_get_unified_restart( ecl_config ); @@ -912,7 +765,7 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , if (unified) util_abort("%s: sorry - unified restart files are not supported \n",__func__); { - char * filename = ecl_util_alloc_exfilename(run_info->run_path , member_config_get_eclbase(enkf_state->my_config) , ECL_RESTART_FILE , fmt_file , report_step); + char * filename = ecl_util_alloc_exfilename(run_arg_get_runpath(run_arg) , member_config_get_eclbase(enkf_state->my_config) , ECL_RESTART_FILE , fmt_file , report_step); if (filename) { restart_file = ecl_file_open( filename , 0 ); free(filename); @@ -1020,7 +873,7 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , /* Static kewyords go straight out .... */ - enkf_node_store(enkf_node , fs , true , node_id); + enkf_node_store(enkf_node , result_fs , true , node_id); enkf_node_free_data(enkf_node); } } @@ -1029,7 +882,7 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , util_abort("%s: hm - something wrong - can (currently) only load FIELD/STATIC implementations from restart files - aborting \n",__func__); free(kw); } - enkf_fs_fwrite_restart_kw_list( fs , report_step , iens , enkf_state->restart_kw_list ); + enkf_fs_fwrite_restart_kw_list( result_fs , report_step , iens , enkf_state->restart_kw_list ); } } @@ -1055,12 +908,12 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , if (internalize_kw) { if (enkf_node_has_func(enkf_node , forward_load_func)) { - if (enkf_node_forward_load(enkf_node , run_info->run_path , NULL , restart_file , report_step , iens )) { + if (enkf_node_forward_load(enkf_node , run_arg_get_runpath( run_arg ) , NULL , restart_file , report_step , iens )) { node_id_type node_id = {.report_step = report_step , .iens = iens , .state = FORECAST }; - enkf_node_store( enkf_node , fs, store_vectors , node_id ); + enkf_node_store( enkf_node , result_fs, store_vectors , node_id ); } else { *result |= LOAD_FAILURE; ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d] Failed load data for node:%s.",iens , report_step , enkf_node_get_key( enkf_node )); @@ -1094,8 +947,7 @@ static void enkf_state_internalize_eclipse_state(enkf_state_type * enkf_state , */ -static void enkf_state_internalize_results(enkf_state_type * enkf_state , enkf_fs_type * fs ,int * result , bool interactive , stringlist_type * msg_list) { - run_info_type * run_info = enkf_state->run_info; +static void enkf_state_internalize_results(enkf_state_type * enkf_state , run_arg_type * run_arg , int * result , bool interactive , stringlist_type * msg_list) { model_config_type * model_config = enkf_state->shared_info->model_config; int report_step; @@ -1105,9 +957,10 @@ static void enkf_state_internalize_results(enkf_state_type * enkf_state , enkf_f hence we must load the summary results first. */ - enkf_state_internalize_dynamic_eclipse_results(enkf_state , fs , model_config , result, interactive , msg_list); + enkf_state_internalize_dynamic_eclipse_results(enkf_state , run_arg , model_config , result, interactive , msg_list); { - int last_report = time_map_get_last_step( enkf_fs_get_time_map( fs )); + enkf_fs_type * result_fs = run_arg_get_result_fs( run_arg ); + int last_report = time_map_get_last_step( enkf_fs_get_time_map( result_fs )); if (last_report < 0) last_report = model_config_get_last_history_restart( enkf_state->shared_info->model_config); @@ -1115,48 +968,50 @@ static void enkf_state_internalize_results(enkf_state_type * enkf_state , enkf_f If we are in true assimilation mode we use the step2 setting, otherwise we are just in plain gready-load-mode. */ - if (run_info->run_mode == ENKF_ASSIMILATION) - last_report = run_info->step2; + if (run_arg_get_run_mode(run_arg) == ENKF_ASSIMILATION) + last_report = run_arg_get_step2( run_arg ); /* Ensure that the last step is internalized? */ model_config_set_internalize_state( model_config , last_report); - for (report_step = run_info->load_start; report_step <= last_report; report_step++) { + for (report_step = run_arg_get_load_start( run_arg ); report_step <= last_report; report_step++) { bool store_vectors = (report_step == last_report) ? true : false; if (model_config_load_state( model_config , report_step)) - enkf_state_internalize_eclipse_state(enkf_state , fs , model_config , report_step , store_vectors , result , interactive , msg_list); + enkf_state_internalize_eclipse_state(enkf_state , run_arg , model_config , report_step , store_vectors , result , interactive , msg_list); } - enkf_state_internalize_GEN_DATA(enkf_state , fs , model_config , run_info->load_start , last_report , result , interactive , msg_list); + enkf_state_internalize_GEN_DATA(enkf_state , run_arg , model_config , last_report , result , interactive , msg_list); } } void enkf_state_forward_init(enkf_state_type * enkf_state , - enkf_fs_type * fs , + run_arg_type * run_arg , int * result ) { - run_info_type * run_info = enkf_state->run_info; - if (run_info->step1 == 0) { + if (run_arg_get_step1(run_arg) == 0) { int iens = enkf_state_get_iens( enkf_state ); hash_iter_type * iter = hash_iter_alloc( enkf_state->node_hash ); while ( !hash_iter_is_complete(iter) ) { enkf_node_type * node = hash_iter_get_next_value(iter); if (enkf_node_use_forward_init(node)) { + enkf_fs_type * result_fs = run_arg_get_result_fs( run_arg ); node_id_type node_id = {.report_step = 0 , .iens = iens , .state = ANALYZED }; - /* Will not reinitialize; i.e. it is essential that the + /* + Will not reinitialize; i.e. it is essential that the forward model uses the state given from the stored - instance, and not from the current run of e.g. RMS. */ + instance, and not from the current run of e.g. RMS. + */ - if (!enkf_node_has_data( node , fs , node_id)) { - if (enkf_node_forward_init(node , run_info->run_path , iens )) - enkf_node_store( node , fs, false , node_id ); + if (!enkf_node_has_data( node , result_fs , node_id)) { + if (enkf_node_forward_init(node , run_arg_get_runpath( run_arg ) , iens )) + enkf_node_store( node , result_fs , false , node_id ); else { - char * init_file = enkf_config_node_alloc_initfile( enkf_node_get_config( node ) , run_info->run_path , iens ); + char * init_file = enkf_config_node_alloc_initfile( enkf_node_get_config( node ) , run_arg_get_runpath(run_arg) , iens ); if (init_file && !util_file_exists( init_file )) fprintf(stderr,"File not found: %s - failed to initialize node: %s\n", init_file , enkf_node_get_key( node )); @@ -1178,17 +1033,18 @@ void enkf_state_forward_init(enkf_state_type * enkf_state , void enkf_state_load_from_forward_model(enkf_state_type * enkf_state , - enkf_fs_type * fs , + run_arg_type * run_arg , int * result, bool interactive , stringlist_type * msg_list) { - + + if (ensemble_config_have_forward_init( enkf_state->ensemble_config )) - enkf_state_forward_init( enkf_state , fs , result ); + enkf_state_forward_init( enkf_state , run_arg , result ); - enkf_state_internalize_results( enkf_state , fs , result , interactive , msg_list ); + enkf_state_internalize_results( enkf_state , run_arg , result , interactive , msg_list ); { - state_map_type * state_map = enkf_fs_get_state_map( fs ); + state_map_type * state_map = enkf_fs_get_state_map( run_arg_get_result_fs( run_arg ) ); int iens = member_config_get_iens( enkf_state->my_config ); if (*result & LOAD_FAILURE) state_map_iset( state_map , iens , STATE_LOAD_FAILURE); @@ -1204,32 +1060,20 @@ void enkf_state_load_from_forward_model(enkf_state_type * enkf_state , */ void * enkf_state_load_from_forward_model_mt( void * arg ) { - arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); - enkf_state_type * enkf_state = arg_pack_iget_ptr( arg_pack , 0 ); - enkf_fs_type * fs = arg_pack_iget_ptr( arg_pack , 1 ); - int load_start = arg_pack_iget_int( arg_pack , 2 ); - int step1 = arg_pack_iget_int( arg_pack , 3 ); - int step2 = arg_pack_iget_int( arg_pack , 4 ); - bool interactive = arg_pack_iget_bool( arg_pack , 5 ); - stringlist_type * msg_list = arg_pack_iget_ptr( arg_pack , 6 ); - bool manual_load = arg_pack_iget_bool( arg_pack , 7 ); - int iens = member_config_get_iens( enkf_state->my_config ); - int iter = arg_pack_iget_int( arg_pack , 8 ); - int * result = arg_pack_iget_ptr( arg_pack , 9 ); + arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + enkf_state_type * enkf_state = enkf_state_safe_cast(arg_pack_iget_ptr( arg_pack , 0 )); + run_arg_type * run_arg = arg_pack_iget_ptr( arg_pack , 1 ); + bool interactive = arg_pack_iget_bool( arg_pack , 2 ); + stringlist_type * msg_list = arg_pack_iget_ptr( arg_pack , 3 ); + bool manual_load = arg_pack_iget_bool( arg_pack , 4 ); + int * result = arg_pack_iget_ptr( arg_pack , 5 ); - if (manual_load) - state_map_update_undefined(enkf_fs_get_state_map(fs) , iens , STATE_INITIALIZED); - - run_info_init_for_load( enkf_state->run_info , - load_start , - step1 , - step2 , - iens , - iter , - model_config_get_runpath_fmt( enkf_state->shared_info->model_config ) , - enkf_state->subst_list ); + int iens = run_arg_get_iens( run_arg ); - enkf_state_load_from_forward_model( enkf_state , fs , result , interactive , msg_list ); + if (manual_load) + state_map_update_undefined(enkf_fs_get_state_map( run_arg_get_result_fs(run_arg) ) , iens , STATE_INITIALIZED); + + enkf_state_load_from_forward_model( enkf_state , run_arg , result , interactive , msg_list ); if (*result & REPORT_STEP_INCOMPATIBLE) { // If refcase has been used for observations: crash and burn. fprintf(stderr,"** Warning the timesteps in refcase and current simulation are not in accordance - something wrong with schedule file?\n"); @@ -1247,24 +1091,23 @@ void * enkf_state_load_from_forward_model_mt( void * arg ) { /** - Observe that this function uses run_info->step1 to load all the nodes which + Observe that this function uses run_arg->step1 to load all the nodes which are needed in the restart file. I.e. if you have carefully prepared a funny state with dynamic/static data which do not agree with the current value of - run_info->step1 YOUR STATE WILL BE OVERWRITTEN. + run_arg->step1 YOUR STATE WILL BE OVERWRITTEN. */ -static void enkf_state_write_restart_file(enkf_state_type * enkf_state , enkf_fs_type * fs) { +static void enkf_state_write_restart_file(enkf_state_type * enkf_state , const run_arg_type * run_arg , enkf_fs_type * fs) { const member_config_type * my_config = enkf_state->my_config; - const run_info_type * run_info = enkf_state->run_info; const bool fmt_file = ecl_config_get_formatted(enkf_state->shared_info->ecl_config); const int iens = member_config_get_iens( my_config ); - char * restart_file = ecl_util_alloc_filename(run_info->run_path , member_config_get_eclbase( enkf_state->my_config ) , ECL_RESTART_FILE , fmt_file , run_info->step1); + char * restart_file = ecl_util_alloc_filename(run_arg_get_runpath( run_arg ) , member_config_get_eclbase( enkf_state->my_config ) , ECL_RESTART_FILE , fmt_file , run_arg_get_step1(run_arg)); fortio_type * fortio = fortio_open_writer(restart_file , fmt_file , ECL_ENDIAN_FLIP); const char * kw; int ikw; if (stringlist_get_size(enkf_state->restart_kw_list) == 0) - enkf_fs_fread_restart_kw_list(fs , run_info->step1 , iens , enkf_state->restart_kw_list); + enkf_fs_fread_restart_kw_list(fs , run_arg_get_step1(run_arg) , iens , enkf_state->restart_kw_list); for (ikw = 0; ikw < stringlist_get_size(enkf_state->restart_kw_list); ikw++) { kw = stringlist_iget( enkf_state->restart_kw_list , ikw); @@ -1294,19 +1137,19 @@ static void enkf_state_write_restart_file(enkf_state_type * enkf_state , enkf_fs enkf_node_type * enkf_node = enkf_state_get_node(enkf_state , kw); enkf_var_type var_type = enkf_node_get_var_type(enkf_node); if (var_type == STATIC_STATE) { - node_id_type node_id = {.report_step = run_info->step1 , + node_id_type node_id = {.report_step = run_arg_get_step1(run_arg) , .iens = iens , - .state = run_info->init_state_dynamic }; + .state = run_arg_get_dynamic_init_state(run_arg) }; enkf_node_load( enkf_node , fs , node_id); } if (var_type == DYNAMIC_STATE) { /* Pressure and saturations */ if (enkf_node_get_impl_type(enkf_node) == FIELD) - enkf_node_ecl_write(enkf_node , NULL , fortio , run_info->step1); + enkf_node_ecl_write(enkf_node , NULL , fortio , run_arg_get_step1(run_arg)); else util_abort("%s: internal error wrong implementetion type:%d - node:%s aborting \n",__func__ , enkf_node_get_impl_type(enkf_node) , enkf_node_get_key(enkf_node)); } else if (var_type == STATIC_STATE) { - enkf_node_ecl_write(enkf_node , NULL , fortio , run_info->step1); + enkf_node_ecl_write(enkf_node , NULL , fortio , run_arg_get_step1(run_arg)); enkf_node_free_data(enkf_node); /* Just immediately discard the static data. */ } else { fprintf(stderr,"var_type: %d \n",var_type); @@ -1330,11 +1173,9 @@ static void enkf_state_write_restart_file(enkf_state_type * enkf_state , enkf_fs The writing of restart file is delegated to enkf_state_write_restart_file(). */ -void enkf_state_ecl_write(enkf_state_type * enkf_state, enkf_fs_type * fs) { - const run_info_type * run_info = enkf_state->run_info; - - if (run_info->step1 > 0) - enkf_state_write_restart_file(enkf_state , fs); +void enkf_state_ecl_write(enkf_state_type * enkf_state, const run_arg_type * run_arg , enkf_fs_type * fs) { + if (run_arg_get_step1(run_arg) > 0) + enkf_state_write_restart_file(enkf_state , run_arg , fs); else { /* These keywords are added here becasue otherwise the main loop @@ -1360,7 +1201,7 @@ void enkf_state_ecl_write(enkf_state_type * enkf_state, enkf_fs_type * fs) { const shared_info_type * shared_info = enkf_state->shared_info; const model_config_type * model_config = shared_info->model_config; const char * base_name = model_config_get_gen_kw_export_file(model_config); - char * export_file_name = util_alloc_filename( run_info->run_path , base_name , NULL); + char * export_file_name = util_alloc_filename( run_arg_get_runpath( run_arg ) , base_name , NULL); FILE * export_file = util_mkdir_fopen(export_file_name, "w"); @@ -1375,15 +1216,15 @@ void enkf_state_ecl_write(enkf_state_type * enkf_state, enkf_fs_type * fs) { if (enkf_node_get_var_type( enkf_node ) != STATIC_STATE) { /* Ensure that no-longer-active static keywords do not create problems. */ bool forward_init = enkf_node_use_forward_init( enkf_node ); - if ((run_info->step1 == 0) && (forward_init)) { + if ((run_arg_get_step1(run_arg) == 0) && (forward_init)) { node_id_type node_id = {.report_step = 0, .iens = iens , .state = ANALYZED }; if (enkf_node_has_data( enkf_node , fs , node_id)) - enkf_node_ecl_write(enkf_node , run_info->run_path , export_file , run_info->step1); + enkf_node_ecl_write(enkf_node , run_arg_get_runpath( run_arg ) , export_file , run_arg_get_step1(run_arg)); } else - enkf_node_ecl_write(enkf_node , run_info->run_path , export_file , run_info->step1); + enkf_node_ecl_write(enkf_node , run_arg_get_runpath( run_arg ) , export_file , run_arg_get_step1(run_arg)); } } @@ -1602,7 +1443,6 @@ void enkf_state_free(enkf_state_type *enkf_state) { subst_list_free(enkf_state->subst_list); stringlist_free(enkf_state->restart_kw_list); member_config_free(enkf_state->my_config); - run_info_free(enkf_state->run_info); shared_info_free(enkf_state->shared_info); free(enkf_state); } @@ -1634,7 +1474,7 @@ void enkf_state_del_node(enkf_state_type * enkf_state , const char * node_key) { change with report step. */ -static void enkf_state_set_dynamic_subst_kw(enkf_state_type * enkf_state , const char * run_path , int step1 , int step2) { +static void enkf_state_set_dynamic_subst_kw__(enkf_state_type * enkf_state , const char * run_path , int step1 , int step2) { const ecl_config_type * ecl_config = enkf_state->shared_info->ecl_config; const bool fmt_file = ecl_config_get_formatted( ecl_config ); @@ -1722,6 +1562,10 @@ static void enkf_state_set_dynamic_subst_kw(enkf_state_type * enkf_state , const } } +static void enkf_state_set_dynamic_subst_kw(enkf_state_type * enkf_state , const run_arg_type * run_arg ) { + enkf_state_set_dynamic_subst_kw__( enkf_state , run_arg_get_runpath( run_arg ) , run_arg_get_step1( run_arg ) , run_arg_get_step2( run_arg )); +} + void enkf_state_printf_subst_list(enkf_state_type * enkf_state , int step1 , int step2) { @@ -1731,7 +1575,7 @@ void enkf_state_printf_subst_list(enkf_state_type * enkf_state , int step1 , int printf(fmt_string , "Key" , "Current value" , "Description"); printf("------------------------------------------------------------------------------------------------------------------------\n"); if (step1 >= 0) - enkf_state_set_dynamic_subst_kw(enkf_state , NULL , step1 , step2); + enkf_state_set_dynamic_subst_kw__(enkf_state , NULL , step1 , step2 ); for (ikw = 0; ikw < subst_list_get_size( enkf_state->subst_list ); ikw++) { const char * key = subst_list_iget_key( enkf_state->subst_list , ikw); @@ -1764,28 +1608,27 @@ void enkf_state_printf_subst_list(enkf_state_type * enkf_state , int step1 , int */ -static void enkf_state_init_eclipse(enkf_state_type *enkf_state, enkf_fs_type * fs) { +void enkf_state_init_eclipse(enkf_state_type *enkf_state, const run_arg_type * run_arg ) { const member_config_type * my_config = enkf_state->my_config; const ecl_config_type * ecl_config = enkf_state->shared_info->ecl_config; { - const run_info_type * run_info = enkf_state->run_info; - if (!run_info->__ready) + if (!run_arg_is_ready(run_arg)) util_abort("%s: must initialize run parameters with enkf_state_init_run() first \n",__func__); if (member_config_pre_clear_runpath( my_config )) - util_clear_directory( run_info->run_path , true , false ); + util_clear_directory( run_arg_get_runpath( run_arg ) , true , false ); - util_make_path(run_info->run_path); + util_make_path(run_arg_get_runpath( run_arg )); { if (ecl_config_get_schedule_target( ecl_config ) != NULL) { - char * schedule_file_target = util_alloc_filename(run_info->run_path , ecl_config_get_schedule_target( ecl_config ) , NULL); + char * schedule_file_target = util_alloc_filename(run_arg_get_runpath( run_arg ) , ecl_config_get_schedule_target( ecl_config ) , NULL); char * schedule_file_target_path = util_split_alloc_dirname(schedule_file_target); util_make_path(schedule_file_target_path); free(schedule_file_target_path); - if (run_info->run_mode == ENKF_ASSIMILATION) - sched_file_fprintf_i( ecl_config_get_sched_file( ecl_config ) , run_info->step2 , schedule_file_target); + if (run_arg_get_run_mode(run_arg) == ENKF_ASSIMILATION) + sched_file_fprintf_i( ecl_config_get_sched_file( ecl_config ) , run_arg_get_step2(run_arg) , schedule_file_target); else sched_file_fprintf( ecl_config_get_sched_file( ecl_config ) , schedule_file_target); @@ -1798,35 +1641,35 @@ static void enkf_state_init_eclipse(enkf_state_type *enkf_state, enkf_fs_type * For reruns of various kinds the parameters and the state are generally loaded from different timesteps: */ - - /* Loading parameter information: loaded from timestep: run_info->init_step_parameters. */ - enkf_state_fread(enkf_state , fs , PARAMETER , run_info->init_step_parameters , run_info->init_state_parameter); + { + enkf_fs_type * init_fs = run_arg_get_init_fs( run_arg ); + /* Loading parameter information: loaded from timestep: run_arg->init_step_parameters. */ + enkf_state_fread(enkf_state , init_fs , PARAMETER , run_arg_get_parameter_init_step(run_arg) , run_arg_get_parameter_init_state(run_arg)); - /* Loading state information: loaded from timestep: run_info->step1 */ - if (run_info->step1 == 0) - enkf_state_fread_initial_state(enkf_state , fs); - else - enkf_state_fread_state_nodes( enkf_state , fs , run_info->step1 , run_info->init_state_dynamic); + /* Loading state information: loaded from timestep: run_arg->step1 */ + if (run_arg_get_step1(run_arg) == 0) + enkf_state_fread_initial_state(enkf_state , init_fs); + else + enkf_state_fread_state_nodes( enkf_state , init_fs , run_arg_get_step1(run_arg) , run_arg_get_dynamic_init_state(run_arg)); - enkf_state_set_dynamic_subst_kw( enkf_state , run_info->run_path , run_info->step1 , run_info->step2); - ert_templates_instansiate( enkf_state->shared_info->templates , run_info->run_path , enkf_state->subst_list ); - enkf_state_ecl_write( enkf_state , fs); + enkf_state_set_dynamic_subst_kw( enkf_state , run_arg ); + ert_templates_instansiate( enkf_state->shared_info->templates , run_arg_get_runpath( run_arg ) , enkf_state->subst_list ); + enkf_state_ecl_write( enkf_state , run_arg , init_fs); - if (member_config_get_eclbase( my_config ) != NULL) { - - /* Writing the ECLIPSE data file. */ - if (ecl_config_get_data_file( ecl_config ) != NULL) { - char * data_file = ecl_util_alloc_filename(run_info->run_path , member_config_get_eclbase( my_config ) , ECL_DATA_FILE , true , -1); - subst_list_filter_file(enkf_state->subst_list , ecl_config_get_data_file(ecl_config) , data_file); - free( data_file ); - } + if (member_config_get_eclbase( my_config ) != NULL) { + /* Writing the ECLIPSE data file. */ + if (ecl_config_get_data_file( ecl_config ) != NULL) { + char * data_file = ecl_util_alloc_filename(run_arg_get_runpath( run_arg ) , member_config_get_eclbase( my_config ) , ECL_DATA_FILE , true , -1); + subst_list_filter_file(enkf_state->subst_list , ecl_config_get_data_file(ecl_config) , data_file); + free( data_file ); + } + } } - member_config_get_jobname( my_config ); /* This is where the job script is created */ - forward_model_python_fprintf( model_config_get_forward_model( enkf_state->shared_info->model_config ) , run_info->run_path , enkf_state->subst_list); + forward_model_python_fprintf( model_config_get_forward_model( enkf_state->shared_info->model_config ) , run_arg_get_runpath( run_arg ) , enkf_state->subst_list); } } @@ -1835,57 +1678,11 @@ static void enkf_state_init_eclipse(enkf_state_type *enkf_state, enkf_fs_type * -/** - xx_run_forward_model() has been split in two functions: - - 1: enkf_state_start_forward_model() - - 2: enkf_state_complete_forward_model() - - Because the first is quite CPU intensive (gunzip), and the number of - concurrent threads should be limited. For the second there is one - thread for each ensemble member. This is handled by the calling scope. -*/ bool enkf_state_complete_forward_modelOK__(void * arg ); bool enkf_state_complete_forward_modelEXIT__(void * arg ); bool enkf_state_complete_forward_modelRETRY__(void * arg ); -static void enkf_state_start_forward_model(enkf_state_type * enkf_state , enkf_fs_type * fs) { - run_info_type * run_info = enkf_state->run_info; - if (run_info->active) { /* if the job is not active we just return .*/ - const shared_info_type * shared_info = enkf_state->shared_info; - const member_config_type * my_config = enkf_state->my_config; - const site_config_type * site_config = shared_info->site_config; - enkf_state_init_eclipse( enkf_state , fs ); - - if (run_info->run_mode != INIT_ONLY) { - // The job_queue_node will take ownership of this arg_pack; and destroy it when - // the job_queue_node is discarded. - arg_pack_type * load_arg = arg_pack_alloc(); - - /* - Prepare the job and submit it to the queue - */ - arg_pack_append_ptr( load_arg , enkf_state ); - arg_pack_append_ptr( load_arg , fs ); - - run_info->queue_index = job_queue_add_job_mt( shared_info->job_queue , - site_config_get_job_script( site_config ), - enkf_state_complete_forward_modelOK__ , - enkf_state_complete_forward_modelRETRY__ , - enkf_state_complete_forward_modelEXIT__, - load_arg , - ecl_config_get_num_cpu( shared_info->ecl_config ), - run_info->run_path , - member_config_get_jobname(my_config) , - 1, - (const char *[1]) { run_info->run_path } ); - run_info->num_internal_submit++; - } - } -} - /** This function is called when: @@ -1900,28 +1697,19 @@ static void enkf_state_start_forward_model(enkf_state_type * enkf_state , enkf_f resampled. */ -static bool enkf_state_can_retry( const enkf_state_type * enkf_state ) { - run_info_type * run_info = enkf_state->run_info; - if (run_info->num_internal_submit < run_info->max_internal_submit) - return true; - else - return false; -} - -static void enkf_state_internal_retry(enkf_state_type * enkf_state , enkf_fs_type * fs , bool load_failure) { +static void enkf_state_internal_retry(enkf_state_type * enkf_state , run_arg_type * run_arg , bool load_failure) { const member_config_type * my_config = enkf_state->my_config; - run_info_type * run_info = enkf_state->run_info; const shared_info_type * shared_info = enkf_state->shared_info; const int iens = member_config_get_iens( my_config ); if (load_failure) - ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Failed to load all data.",iens , run_info->step1 , run_info->step2); + ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Failed to load all data.",iens , run_arg_get_step1(run_arg) , run_arg_get_step2(run_arg)); else - ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Forward model failed.",iens, run_info->step1 , run_info->step2); + ert_log_add_fmt_message( 1 , NULL , "[%03d:%04d - %04d] Forward model failed.",iens, run_arg_get_step1(run_arg) , run_arg_get_step2(run_arg)); - if (run_info->num_internal_submit < run_info->max_internal_submit) { + if (run_arg_can_retry( run_arg ) ) { ert_log_add_fmt_message( 1 , NULL , "[%03d] Resampling and resubmitting realization." ,iens); { /* Reinitialization of the nodes */ @@ -1933,113 +1721,29 @@ static void enkf_state_internal_retry(enkf_state_type * enkf_state , enkf_fs_typ stringlist_free( init_keys ); } - enkf_state_init_eclipse( enkf_state , fs ); /* Possibly clear the directory and do a FULL rewrite of ALL the necessary files. */ - job_queue_iset_external_restart( shared_info->job_queue , run_info->queue_index ); /* Here we inform the queue system that it should pick up this job and try again. */ - run_info->num_internal_submit++; + enkf_state_init_eclipse( enkf_state , run_arg ); /* Possibly clear the directory and do a FULL rewrite of ALL the necessary files. */ + job_queue_iset_external_restart( shared_info->job_queue , run_arg_get_queue_index(run_arg) ); /* Here we inform the queue system that it should pick up this job and try again. */ + run_arg_increase_submit_count( run_arg ); } } -/** - Checks that both the run has completed OK - that also includes the - loading back of results. -*/ - -run_status_type enkf_state_get_simple_run_status(const enkf_state_type * state) { - return state->run_info->run_status; -} - -job_status_type enkf_state_get_run_status( const enkf_state_type * enkf_state ) { - run_info_type * run_info = enkf_state->run_info; - /** - The submission process happens in another thread, and might not - be complete, must therefor check the value of queue_index prior - to invoking the job_queue layer. - */ - if (run_info->active && run_info->queue_index >= 0) { - const shared_info_type * shared_info = enkf_state->shared_info; - return job_queue_iget_job_status(shared_info->job_queue , run_info->queue_index); - } else - return JOB_QUEUE_NOT_ACTIVE; -} - - -time_t enkf_state_get_start_time( const enkf_state_type * enkf_state ) { - run_info_type * run_info = enkf_state->run_info; - if (run_info->active) { - const shared_info_type * shared_info = enkf_state->shared_info; - return job_queue_iget_sim_start(shared_info->job_queue , run_info->queue_index); - } else - return -1; -} - - -time_t enkf_state_get_submit_time( const enkf_state_type * enkf_state ) { - run_info_type * run_info = enkf_state->run_info; - if (run_info->active) { - const shared_info_type * shared_info = enkf_state->shared_info; - return job_queue_iget_submit_time(shared_info->job_queue , run_info->queue_index); - } else - return -1; -} -/** - Will return true if the simulation is actually killed, and false if - the "kill command" is ignored (only jobs with status matching - JOB_QUEUE_CAN_KILL will actually be killed). -*/ -bool enkf_state_kill_simulation( const enkf_state_type * enkf_state ) { - const shared_info_type * shared_info = enkf_state->shared_info; - const run_info_type * run_info = enkf_state->run_info; - return job_queue_kill_job(shared_info->job_queue , run_info->queue_index); -} -/** - This function is very similar to the enkf_state_internal_retry() - - they should be refactored. - Will return true if the simulation is actually resubmitted, and - false if it is not restarted. -*/ - -bool enkf_state_resubmit_simulation( enkf_state_type * enkf_state , enkf_fs_type * fs , bool resample) { - const shared_info_type * shared_info = enkf_state->shared_info; - const run_info_type * run_info = enkf_state->run_info; - int iens = member_config_get_iens( enkf_state->my_config ); - job_status_type current_status = job_queue_iget_job_status(shared_info->job_queue , run_info->queue_index); - if (current_status & JOB_QUEUE_CAN_RESTART) { - /* Reinitialization of the nodes */ - if (resample) { - stringlist_type * init_keys = ensemble_config_alloc_keylist_from_var_type( enkf_state->ensemble_config , DYNAMIC_STATE + PARAMETER ); - for (int ikey=0; ikey < stringlist_get_size( init_keys ); ikey++) { - enkf_node_type * node = enkf_state_get_node( enkf_state , stringlist_iget( init_keys , ikey) ); - enkf_node_initialize( node , iens , enkf_state->rng ); - } - stringlist_free( init_keys ); - } - enkf_state_init_eclipse( enkf_state , fs ); /* Possibly clear the directory and do a FULL rewrite of ALL the necessary files. */ - job_queue_iset_external_restart( shared_info->job_queue , run_info->queue_index ); /* Here we inform the queue system that it should pick up this job and try again. */ - return true; - } else - return false; /* The job was not resubmitted. */ -} - - - -static void enkf_state_clear_runpath( const enkf_state_type * enkf_state ) { +static void enkf_state_clear_runpath( const enkf_state_type * enkf_state , run_arg_type * run_arg) { const member_config_type * my_config = enkf_state->my_config; - const run_info_type * run_info = enkf_state->run_info; keep_runpath_type keep_runpath = member_config_get_keep_runpath( my_config ); bool unlink_runpath; if (keep_runpath == DEFAULT_KEEP) { - if (run_info->run_mode == ENKF_ASSIMILATION) + if (run_arg_get_run_mode(run_arg) == ENKF_ASSIMILATION) unlink_runpath = true; /* For assimilation the default is to unlink. */ else unlink_runpath = false; /* For experiments the default is to keep the directories around. */ @@ -2056,20 +1760,19 @@ static void enkf_state_clear_runpath( const enkf_state_type * enkf_state ) { } if (unlink_runpath) - util_clear_directory(run_info->run_path , true , true); + util_clear_directory(run_arg_get_runpath( run_arg ) , true , true); } /** - Observe that if run_info == false, this routine will return with + Observe that if run_arg == false, this routine will return with job_completeOK == true, that might be a bit misleading. Observe that if an internal retry is performed, this function will be called several times - MUST BE REENTRANT. */ -static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , enkf_fs_type * fs) { - run_info_type * run_info = enkf_state->run_info; +static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , run_arg_type * run_arg) { const member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); int result = 0; @@ -2081,8 +1784,8 @@ static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , e in this scope whether the results can be loaded back; if that is OK the final status is updated, otherwise: restart. */ - ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Forward model complete - starting to load results." , iens , run_info->step1, run_info->step2); - enkf_state_load_from_forward_model(enkf_state , fs , &result , false , NULL); + ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Forward model complete - starting to load results." , iens , run_arg_get_step1(run_arg), run_arg_get_step2(run_arg)); + enkf_state_load_from_forward_model(enkf_state , run_arg , &result , false , NULL); if (result & REPORT_STEP_INCOMPATIBLE) { // If refcase has been used for observations: crash and burn. @@ -2098,32 +1801,28 @@ static bool enkf_state_complete_forward_modelOK(enkf_state_type * enkf_state , e about the success. In addition we set the simple status (should be avoided) to JOB_RUN_OK. */ - run_info->run_status = JOB_RUN_OK; - ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Results loaded successfully." , iens , run_info->step1, run_info->step2); + run_arg_set_run_status( run_arg , JOB_RUN_OK); + ert_log_add_fmt_message( 2 , NULL , "[%03d:%04d-%04d] Results loaded successfully." , iens , run_arg_get_step1(run_arg), run_arg_get_step2(run_arg)); - enkf_state_clear_runpath( enkf_state ); - run_info->__ready = false; /* Setting it to false - for the next round ??? */ - run_info_complete_run(enkf_state->run_info); /* free() on runpath */ + enkf_state_clear_runpath( enkf_state , run_arg ); + run_arg_set_ready( run_arg , false ); + run_arg_complete_run(run_arg); /* free() on runpath */ } return (0 == result) ? true : false; } bool enkf_state_complete_forward_modelOK__(void * arg ) { - enkf_state_type * enkf_state; - enkf_fs_type * fs; arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + enkf_state_type * enkf_state = enkf_state_safe_cast( arg_pack_iget_ptr( arg_pack , 0 )); + run_arg_type * run_arg = run_arg_safe_cast( arg_pack_iget_ptr( arg_pack , 1 )); - enkf_state = arg_pack_iget_ptr( arg_pack , 0 ); - fs = arg_pack_iget_ptr( arg_pack , 1 ); - - return enkf_state_complete_forward_modelOK( enkf_state , fs ); + return enkf_state_complete_forward_modelOK( enkf_state , run_arg); } -static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * enkf_state , enkf_fs_type * fs, bool is_retry) { - run_info_type * run_info = enkf_state->run_info; +static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * enkf_state , run_arg_type * run_arg , bool is_retry) { const member_config_type * my_config = enkf_state->my_config; const int iens = member_config_get_iens( my_config ); /* @@ -2131,21 +1830,21 @@ static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * e might give it another try from this scope, possibly involving a resampling. */ - + if (is_retry) { - if (enkf_state_can_retry(enkf_state)) { - enkf_state_internal_retry(enkf_state, fs, false); + if (run_arg_can_retry(run_arg)) { + enkf_state_internal_retry(enkf_state, run_arg , false); return true; } else { return false; } } else { - ert_log_add_fmt_message( 1, NULL, "[%03d:%04d-%04d] FAILED COMPLETELY.", iens, run_info->step1, run_info->step2); + ert_log_add_fmt_message( 1, NULL, "[%03d:%04d-%04d] FAILED COMPLETELY.", iens, run_arg_get_step1(run_arg), run_arg_get_step2(run_arg)); - if (run_info->run_status != JOB_LOAD_FAILURE) - run_info->run_status = JOB_RUN_FAILURE; + if (run_arg_get_run_status(run_arg) != JOB_LOAD_FAILURE) + run_arg_set_run_status( run_arg , JOB_RUN_FAILURE); - state_map_type * state_map = enkf_fs_get_state_map(fs); + state_map_type * state_map = enkf_fs_get_state_map(run_arg_get_result_fs( run_arg )); int iens = member_config_get_iens(enkf_state->my_config); state_map_iset(state_map, iens, STATE_LOAD_FAILURE); return false; @@ -2153,15 +1852,12 @@ static bool enkf_state_complete_forward_model_EXIT_handler__(enkf_state_type * e } static bool enkf_state_complete_forward_model_EXIT_handler(void * arg, bool allow_retry ) { - enkf_state_type * enkf_state; - enkf_fs_type * fs; - { - arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); - enkf_state = arg_pack_iget_ptr( arg_pack , 0 ); - fs = arg_pack_iget_ptr( arg_pack , 1 ); - } + arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); + + enkf_state_type * enkf_state = arg_pack_iget_ptr( arg_pack , 0 ); + run_arg_type * run_arg = arg_pack_iget_ptr( arg_pack , 1 ); - return enkf_state_complete_forward_model_EXIT_handler__( enkf_state , fs, allow_retry ); + return enkf_state_complete_forward_model_EXIT_handler__( enkf_state , run_arg , allow_retry ); } @@ -2174,17 +1870,6 @@ bool enkf_state_complete_forward_modelRETRY__(void * arg ) { } -void * enkf_state_start_forward_model__(void * arg) { - arg_pack_type * arg_pack = arg_pack_safe_cast( arg ); - enkf_state_type * enkf_state = enkf_state_safe_cast( arg_pack_iget_ptr( arg_pack , 0)); - enkf_fs_type * fs = enkf_fs_safe_cast( arg_pack_iget_ptr( arg_pack , 1)); - - enkf_state_start_forward_model( enkf_state , fs); - arg_pack_free( arg_pack ); - return NULL ; -} - - void enkf_state_invalidate_cache( enkf_state_type * enkf_state ) { hash_iter_type * iter = hash_iter_alloc(enkf_state->node_hash); while ( !hash_iter_is_complete(iter) ) { @@ -2198,49 +1883,6 @@ void enkf_state_invalidate_cache( enkf_state_type * enkf_state ) { /*****************************************************************/ -void enkf_state_set_inactive(enkf_state_type * state) { - state->run_info->active = false; -} - -int enkf_state_get_queue_index(const enkf_state_type * enkf_state) { - return enkf_state->run_info->queue_index; -} - - -void enkf_state_init_run(enkf_state_type * state , - run_mode_type run_mode , - bool active , - int max_internal_submit, - int init_step_parameter , - state_enum init_state_parameter , - state_enum init_state_dynamic , - int load_start , - int iter , - int step1 , - int step2) { - - member_config_type * my_config = state->my_config; - shared_info_type * shared_info = state->shared_info; - - - run_info_set( state->run_info , - run_mode , - active , - max_internal_submit, - init_step_parameter , - init_state_parameter , - init_state_dynamic , - load_start , - step1 , - step2 , - iter , - member_config_get_iens( my_config ), - model_config_get_runpath_fmt( shared_info->model_config ), - state->subst_list ); -} - - - rng_type * enkf_state_get_rng( const enkf_state_type * enkf_state ) { return enkf_state->rng; } @@ -2259,3 +1901,4 @@ void enkf_state_set_keep_runpath( enkf_state_type * enkf_state , keep_runpath_ty keep_runpath_type enkf_state_get_keep_runpath( const enkf_state_type * enkf_state ) { return member_config_get_keep_runpath( enkf_state->my_config ); } + diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_run_context.c b/ThirdParty/Ert/devel/libenkf/src/ert_run_context.c new file mode 100644 index 0000000000..3dda7c8317 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/ert_run_context.c @@ -0,0 +1,363 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_run_context.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#include +#include +#include +#include +#include +#include +#include + +#include +#include +#include + + +#define ERT_RUN_CONTEXT_TYPE_ID 55534132 + + +struct ert_run_context_struct { + UTIL_TYPE_ID_DECLARATION; + vector_type * run_args; + bool_vector_type * iactive; // This can be updated .... + run_mode_type run_mode; + init_mode_type init_mode; + int iter; + int step1; + int step2; + int load_start; + int_vector_type * iens_map; + + enkf_fs_type * init_fs; + enkf_fs_type * result_fs; + enkf_fs_type * update_target_fs; +}; + + + +/* + run_mode_type run_mode , + bool_vector_type * iactive , + int load_start , + int init_step_parameter , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int iter , + int step1 , + int step2) +*/ + +//ert_run_context_type * ert_run_context_alloc(enkf_fs_type * init_fs , +// enkf_fs_type * result_fs, +// enkf_fs_type * update_target_fs , +// const bool_vector_type * iactive , +// path_fmt_type * runpath_fmt , +// subst_list_type * subst_list , +// run_mode_type run_mode , +// int init_step_parameter , +// state_enum init_state_parameter, +// state_enum init_state_dynamic , +// int iter , +// int step1 , +// int step2 ) { +// +// ert_run_context_type * context = util_malloc( sizeof * context ); +// UTIL_TYPE_ID_INIT( context , ERT_RUN_CONTEXT_TYPE_ID ); +// +// context->iactive = bool_vector_alloc_copy( iactive ); +// context->iens_map = bool_vector_alloc_active_index_list( iactive , -1 ); +// context->run_args = vector_alloc_new(); +// context->run_mode = run_mode; +// +// context->step1 = step1; +// context->step2 = step2; +// +// +// for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { +// if (bool_vector_iget( iactive , iens )) { +// char * tmp1 = path_fmt_alloc_path(runpath_fmt , false , iens, iter); /* 1: Replace first %d with iens, if a second %d replace with iter */ +// char * tmp2 = tmp1; +// +// if (subst_list) +// tmp2 = subst_list_alloc_filtered_string( subst_list , tmp1 ); /* 2: Filter out various magic strings like and . */ +// { +// run_arg_type * arg; +// +// switch (run_mode) { +// case(ENSEMBLE_EXPERIMENT): +// arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( init_fs , iens , iter , tmp2); +// break; +// case(INIT_ONLY): +// arg = run_arg_alloc_INIT_ONLY( init_fs , iens , iter , tmp2); +// break; +// default: +// arg = run_arg_alloc( init_fs , result_fs , update_target_fs , iens , run_mode , init_step_parameter , init_state_parameter , init_state_dynamic , step1 , step2 , iter , tmp2); +// break; +// } +// +// vector_append_owned_ref( context->run_args , arg , run_arg_free__); +// } +// +// if (subst_list) +// free( tmp2 ); +// free( tmp1 ); +// } +// } +// +// return context; +//} + + +static stringlist_type * ert_run_context_alloc_runpath_list(const bool_vector_type * iactive , path_fmt_type * runpath_fmt , subst_list_type * subst_list , int iter) { + stringlist_type * runpath_list = stringlist_alloc_new(); + for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { + if (bool_vector_iget( iactive , iens )) { + char * tmp1 = path_fmt_alloc_path(runpath_fmt , false , iens, iter); /* 1: Replace first %d with iens, if a second %d replace with iter */ + char * tmp2 = tmp1; + + if (subst_list) + tmp2 = subst_list_alloc_filtered_string( subst_list , tmp1 ); /* 2: Filter out various magic strings like and . */ + + stringlist_append_copy( runpath_list , tmp2 ); + + if (subst_list) + free( tmp2 ); + free( tmp1 ); + } else + stringlist_append_ref( runpath_list , NULL ); + } + return runpath_list; +} + + +static ert_run_context_type * ert_run_context_alloc(const bool_vector_type * iactive , run_mode_type run_mode , enkf_fs_type * init_fs , enkf_fs_type * result_fs , enkf_fs_type * update_target_fs , init_mode_type init_mode, int iter) { + ert_run_context_type * context = util_malloc( sizeof * context ); + UTIL_TYPE_ID_INIT( context , ERT_RUN_CONTEXT_TYPE_ID ); + + context->iactive = bool_vector_alloc_copy( iactive ); + context->iens_map = bool_vector_alloc_active_index_list( iactive , -1 ); + context->run_args = vector_alloc_new(); + context->run_mode = run_mode; + context->init_mode = init_mode; + context->iter = iter; + + context->init_fs = init_fs; + context->result_fs = result_fs; + context->update_target_fs = update_target_fs; + + context->step1 = 0; + context->step2 = 0; + return context; +} + + +ert_run_context_type * ert_run_context_alloc_INIT_ONLY(enkf_fs_type * init_fs , const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter) { + + ert_run_context_type * context = ert_run_context_alloc( iactive , INIT_ONLY , init_fs , NULL , NULL , init_mode , iter ); + { + stringlist_type * runpath_list = ert_run_context_alloc_runpath_list( iactive , runpath_fmt , subst_list , iter ); + for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { + if (bool_vector_iget( iactive , iens )) { + run_arg_type * arg = run_arg_alloc_INIT_ONLY( init_fs , iens , iter , stringlist_iget( runpath_list , iens)); + vector_append_owned_ref( context->run_args , arg , run_arg_free__); + } + } + stringlist_free( runpath_list ); + } + return context; +} + + + + +ert_run_context_type * ert_run_context_alloc_ENSEMBLE_EXPERIMENT(enkf_fs_type * fs , const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter) { + + ert_run_context_type * context = ert_run_context_alloc( iactive , ENSEMBLE_EXPERIMENT , fs , fs , NULL , init_mode , iter); + { + stringlist_type * runpath_list = ert_run_context_alloc_runpath_list( iactive , runpath_fmt , subst_list , iter ); + for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { + if (bool_vector_iget( iactive , iens )) { + run_arg_type * arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , iens , iter , stringlist_iget( runpath_list , iens)); + vector_append_owned_ref( context->run_args , arg , run_arg_free__); + } + } + stringlist_free( runpath_list ); + } + return context; +} + + + +ert_run_context_type * ert_run_context_alloc_SMOOTHER_RUN(enkf_fs_type * simulate_fs , enkf_fs_type * target_update_fs , + const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + int iter) { + + ert_run_context_type * context = ert_run_context_alloc( iactive , SMOOTHER_UPDATE , simulate_fs , simulate_fs , target_update_fs , init_mode , iter); + { + stringlist_type * runpath_list = ert_run_context_alloc_runpath_list( iactive , runpath_fmt , subst_list , iter ); + for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { + if (bool_vector_iget( iactive , iens )) { + run_arg_type * arg = run_arg_alloc_SMOOTHER_RUN( simulate_fs , target_update_fs , iens , iter , stringlist_iget( runpath_list , iens)); + vector_append_owned_ref( context->run_args , arg , run_arg_free__); + } + } + stringlist_free( runpath_list ); + } + return context; +} + + +ert_run_context_type * ert_run_context_alloc_ENKF_ASSIMILATION(enkf_fs_type * fs , + const bool_vector_type * iactive , + path_fmt_type * runpath_fmt , + subst_list_type * subst_list , + init_mode_type init_mode , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + int iter) { + + ert_run_context_type * context = ert_run_context_alloc( iactive , SMOOTHER_UPDATE , fs , fs , fs , init_mode , iter); + { + stringlist_type * runpath_list = ert_run_context_alloc_runpath_list( iactive , runpath_fmt , subst_list , iter ); + for (int iens = 0; iens < bool_vector_size( iactive ); iens++) { + if (bool_vector_iget( iactive , iens )) { + run_arg_type * arg = run_arg_alloc_ENKF_ASSIMILATION( fs , iens , init_state_parameter , init_state_dynamic , step1 , step2 , stringlist_iget( runpath_list , iens)); + vector_append_owned_ref( context->run_args , arg , run_arg_free__); + } + } + stringlist_free( runpath_list ); + } + return context; +} + + + +UTIL_IS_INSTANCE_FUNCTION( ert_run_context , ERT_RUN_CONTEXT_TYPE_ID ); + + + +void ert_run_context_free( ert_run_context_type * context ) { + vector_free( context->run_args ); + bool_vector_free( context->iactive ); + int_vector_free( context->iens_map ); + free( context ); +} + + +int ert_run_context_get_size( const ert_run_context_type * context ) { + return vector_get_size( context->run_args ); +} + + + +run_mode_type ert_run_context_get_mode( const ert_run_context_type * context ) { + return context->run_mode; +} + + + +init_mode_type ert_run_context_get_init_mode( const ert_run_context_type * context ) { + return context->init_mode; +} + + +int ert_run_context_get_iter( const ert_run_context_type * context ) { + return context->iter; +} + +int ert_run_context_get_step1( const ert_run_context_type * context ) { + return context->step1; +} + + +int ert_run_context_get_load_start( const ert_run_context_type * context ) { + if (context->step1 == 0) + return 1; + else + return context->step1; +} + + +int ert_run_context_get_step2( const ert_run_context_type * context ) { + return context->step2; +} + + +bool_vector_type * ert_run_context_get_iactive( const ert_run_context_type * context ) { + return context->iactive; +} + + +run_arg_type * ert_run_context_iget_arg( const ert_run_context_type * context , int index) { + return vector_iget( context->run_args , index ); +} + + +run_arg_type * ert_run_context_iens_get_arg( const ert_run_context_type * context , int iens) { + int index = int_vector_iget( context->iens_map , iens ); + if (index >= 0) + return vector_iget( context->run_args , index ); + else + return NULL; +} + +enkf_fs_type * ert_run_context_get_init_fs(const ert_run_context_type * run_context) { + if (run_context->init_fs) + return run_context->init_fs; + else { + util_abort("%s: internal error - tried to access run_context->init_fs when init_fs == NULL\n",__func__); + return NULL; + } +} + + +enkf_fs_type * ert_run_context_get_result_fs(const ert_run_context_type * run_context) { + if (run_context->result_fs) + return run_context->result_fs; + else { + util_abort("%s: internal error - tried to access run_context->result_fs when result_fs == NULL\n",__func__); + return NULL; + } +} + + +enkf_fs_type * ert_run_context_get_update_target_fs(const ert_run_context_type * run_context) { + if (run_context->update_target_fs) + return run_context->update_target_fs; + else { + util_abort("%s: internal error - tried to access run_context->update_target_fs when update_target_fs == NULL\n",__func__); + return NULL; + } +} + + + diff --git a/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c b/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c index 1089a34c12..f79eee6f94 100644 --- a/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/ert_workflow_list.c @@ -80,7 +80,7 @@ void ert_workflow_list_set_verbose( ert_workflow_list_type * workflow_list , boo } -subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list) { +const subst_list_type * ert_workflow_list_get_context(const ert_workflow_list_type * workflow_list) { return workflow_list->context; } @@ -102,7 +102,7 @@ workflow_type * ert_workflow_list_add_workflow( ert_workflow_list_type * workflo if (workflow_name == NULL) util_alloc_file_components( workflow_file , NULL , &name , NULL ); else - name = workflow_name; + name = (char *) workflow_name; hash_insert_hash_owned_ref( workflow_list->workflows , name , workflow , workflow_free__); diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_data.c b/ThirdParty/Ert/devel/libenkf/src/gen_data.c index fb2a30e108..b85dae165c 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_data.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_data.c @@ -213,7 +213,7 @@ void gen_data_deserialize(gen_data_type * gen_data , node_id_type node_id , cons static void gen_data_set_data__(gen_data_type * gen_data , int size, int report_step , ecl_type_enum load_type , const void * data) { gen_data_assert_size(gen_data , size, report_step); - if (gen_data_config_is_dynamic( gen_data->config )) + if (gen_data_config_is_dynamic( gen_data->config )) gen_data_config_update_active( gen_data->config , report_step , gen_data->active_mask); gen_data_realloc_data(gen_data); @@ -231,9 +231,51 @@ static void gen_data_set_data__(gen_data_type * gen_data , int size, int report_ util_double_to_float((float *) gen_data->data , data , size); } } - } + + +static bool gen_data_fload_active__(gen_data_type * gen_data, const char * filename, int size) { + /* + Look for file @filename_active - if that file is found it is + interpreted as a an active|inactive mask created by the forward + model. + + The file is assumed to be an ASCII file with integers, 0 + indicates inactive elements and 1 active elements. The file + should of course be as long as @filename. + + If the file is not found the gen_data->active_mask is set to + all-true (i.e. the default true value is invoked). + */ + bool file_exists = false; + if (gen_data_config_is_dynamic( gen_data->config )) { + bool_vector_reset( gen_data->active_mask ); + bool_vector_iset( gen_data->active_mask , size - 1, true ); + { + char * active_file = util_alloc_sprintf("%s_active" , filename ); + if (util_file_exists( active_file )) { + file_exists = true; + FILE * stream = util_fopen( active_file , "r"); + int active_int; + for (int index=0; index < size; index++) { + if (fscanf( stream , "%d" , &active_int) == 1) { + if (active_int == 1) + bool_vector_iset( gen_data->active_mask , index , true); + else if (active_int == 0) + bool_vector_iset( gen_data->active_mask , index , false); + else + util_abort("%s: error when loading active mask from:%s only 0 and 1 allowed \n",__func__ , active_file); + } else + util_abort("%s: error when loading active mask from:%s - file not long enough.\n",__func__ , active_file ); + } + fclose( stream ); + } + free( active_file ); + } + } + return file_exists; +} /** @@ -249,64 +291,34 @@ static void gen_data_set_data__(gen_data_type * gen_data , int size, int report_ other members; it is perfectly OK for the file to not exist. In which case a size of zero is set, for this report step. - Return value is whether file was found - might have to check this - in calling scope. + Return value is whether file was found or was empty + - might have to check this in calling scope. */ bool gen_data_fload_with_report_step( gen_data_type * gen_data , const char * filename , int report_step) { - bool has_file = util_file_exists(filename); + bool file_exists = util_file_exists(filename); void * buffer = NULL; int size = 0; ecl_type_enum load_type; - if ( has_file ) { + if ( file_exists ) { ecl_type_enum internal_type = gen_data_config_get_internal_type(gen_data->config); gen_data_file_format_type input_format = gen_data_config_get_input_format( gen_data->config ); buffer = gen_common_fload_alloc( filename , input_format , internal_type , &load_type , &size); - - /* - Look for file @filename_active - if that file is found it is - interpreted as a an active|inactive mask created by the forward - model. - - The file is assumed to be an ASCII file with integers, 0 - indicates inactive elements and 1 active elements. The file - should of course be as long as @filename. - - If the file is not found the gen_data->active_mask is set to - all-true (i.e. the default true value is invoked). - */ - if (gen_data_config_is_dynamic( gen_data->config )) { - bool_vector_reset( gen_data->active_mask ); - bool_vector_iset( gen_data->active_mask , size - 1, true ); - { - char * active_file = util_alloc_sprintf("%s_active" , filename ); - if (util_file_exists( active_file )) { - FILE * stream = util_fopen( active_file , "r"); - int active_int; - for (int index=0; index < size; index++) { - if (fscanf( stream , "%d" , &active_int) == 1) { - if (active_int == 1) - bool_vector_iset( gen_data->active_mask , index , true); - else if (active_int == 0) - bool_vector_iset( gen_data->active_mask , index , false); - else - util_abort("%s: error when loading active mask from:%s only 0 and 1 allowed \n",__func__ , active_file); - } else - util_abort("%s: error when loading active mask from:%s - file not long enough.\n",__func__ , active_file ); - } - fclose( stream ); - } - free( active_file ); - } + if (size > 0) { + gen_data_fload_active__(gen_data, filename, size); + } else { + bool_vector_reset( gen_data->active_mask ); } gen_data_set_data__(gen_data , size , report_step , load_type , buffer ); + util_safe_free(buffer); } - util_safe_free(buffer); - return has_file; + return file_exists; } + + bool gen_data_fload( gen_data_type * gen_data , const char * filename) { return gen_data_fload_with_report_step( gen_data , filename , 0); } @@ -349,7 +361,6 @@ bool gen_data_initialize(gen_data_type * gen_data , int iens , const char * init - static void gen_data_ecl_write_ASCII(const gen_data_type * gen_data , const char * file , gen_data_file_format_type export_format) { FILE * stream = util_fopen(file , "w"); char * template_buffer; @@ -464,6 +475,19 @@ double gen_data_iget_double(const gen_data_type * gen_data, int index) { } +void gen_data_export_data(const gen_data_type * gen_data , double_vector_type * export_data) { + ecl_type_enum internal_type = gen_data_config_get_internal_type(gen_data->config); + if (internal_type == ECL_DOUBLE_TYPE) + double_vector_memcpy_from_data( export_data , (const double *) gen_data->data , gen_data_get_size( gen_data )); + else { + double_vector_reset( export_data ); + float * float_data = (float *) gen_data->data; + for (int i = 0; i < gen_data_get_size( gen_data ); i++) + double_vector_iset( export_data , i , float_data[i]); + } +} + + /** The filesystem will (currently) store gen_data instances which do diff --git a/ThirdParty/Ert/devel/libenkf/src/gen_kw.c b/ThirdParty/Ert/devel/libenkf/src/gen_kw.c index 8eea08127b..f4ef4c8aa9 100644 --- a/ThirdParty/Ert/devel/libenkf/src/gen_kw.c +++ b/ThirdParty/Ert/devel/libenkf/src/gen_kw.c @@ -112,6 +112,17 @@ double gen_kw_data_iget( gen_kw_type * gen_kw, int index , bool do_transform ) } +void gen_kw_data_set_vector( gen_kw_type * gen_kw, const double_vector_type * values ) { + int size = gen_kw_config_get_data_size( gen_kw->config ); + if (size == double_vector_size( values )) { + for (int index = 0; index < size; index++) + gen_kw->data[index] = double_vector_iget( values , index); + } else + util_abort( "%s: Invalid size for vector:%d gen_Kw:%d \n",__func__ , double_vector_size( values ) , size); +} + + + void gen_kw_data_iset( gen_kw_type * gen_kw, int index , double value ) { int size = gen_kw_config_get_data_size( gen_kw->config ); @@ -265,11 +276,19 @@ void gen_kw_ecl_write(const gen_kw_type * gen_kw , const char * run_path , const if (fortio_is_instance(filestream)) { util_abort("%s: Called with fortio instance, aborting\n", __func__); } else { - gen_kw_write_export_file(gen_kw, filestream); + if (filestream) + gen_kw_write_export_file(gen_kw, filestream); + { + char * target_file; + if (run_path) + target_file = util_alloc_filename( run_path , base_file , NULL); + else + target_file = util_alloc_string_copy( base_file ); - char * target_file = util_alloc_filename( run_path , base_file , NULL); - gen_kw_filter_file(gen_kw , target_file); - free( target_file ); + gen_kw_filter_file(gen_kw , target_file); + + free( target_file ); + } } } diff --git a/ThirdParty/Ert/devel/libenkf/src/qc_module.c b/ThirdParty/Ert/devel/libenkf/src/qc_module.c index 3fc0730257..daad468df1 100644 --- a/ThirdParty/Ert/devel/libenkf/src/qc_module.c +++ b/ThirdParty/Ert/devel/libenkf/src/qc_module.c @@ -40,7 +40,6 @@ struct qc_module_struct { workflow_type * qc_workflow; ert_workflow_list_type * workflow_list; runpath_list_type * runpath_list; - char * runpath_list_file; }; @@ -51,18 +50,16 @@ qc_module_type * qc_module_alloc( ert_workflow_list_type * workflow_list , const qc_module->qc_workflow = NULL; qc_module->qc_path = NULL; qc_module->workflow_list = workflow_list; - qc_module->runpath_list = runpath_list_alloc(); - qc_module->runpath_list_file = NULL; + qc_module->runpath_list = runpath_list_alloc( NULL ); qc_module_set_path( qc_module , qc_path ); qc_module_set_runpath_list_file( qc_module , NULL, RUNPATH_LIST_FILE ); - + return qc_module; } void qc_module_free( qc_module_type * qc_module ) { util_safe_free( qc_module->qc_path ); - util_safe_free( qc_module->runpath_list_file); runpath_list_free( qc_module->runpath_list ); free( qc_module ); } @@ -73,14 +70,11 @@ runpath_list_type * qc_module_get_runpath_list( qc_module_type * qc_module ) { void qc_module_export_runpath_list( const qc_module_type * qc_module ) { - FILE * stream = util_fopen( qc_module->runpath_list_file , "w"); - runpath_list_fprintf( qc_module->runpath_list , stream ); - fclose( stream ); + runpath_list_fprintf( qc_module->runpath_list ); } static void qc_module_set_runpath_list_file__( qc_module_type * qc_module , const char * runpath_list_file) { - util_safe_free( qc_module->runpath_list_file ); - qc_module->runpath_list_file = util_alloc_string_copy( runpath_list_file ); + runpath_list_set_export_file( qc_module->runpath_list , runpath_list_file ); } @@ -111,8 +105,8 @@ void qc_module_set_runpath_list_file( qc_module_type * qc_module , const char * } } -const char * qc_module_get_runpath_list_file( qc_module_type * qc_module) { - return qc_module->runpath_list_file; +const char * qc_module_get_runpath_list_file( const qc_module_type * qc_module) { + return runpath_list_get_export_file( qc_module->runpath_list ); } @@ -143,8 +137,9 @@ void qc_module_set_workflow( qc_module_type * qc_module , const char * qc_workfl bool qc_module_run_workflow( const qc_module_type * qc_module , void * self) { bool verbose = false; if (qc_module->qc_workflow != NULL ) { - if (!util_file_exists( qc_module->runpath_list_file )) - fprintf(stderr,"** Warning: the file:%s with a list of runpath directories was not found - QC workflow wil probably fail.\n" , qc_module->runpath_list_file); + const char * export_file = runpath_list_get_export_file( qc_module->runpath_list ); + if (!util_file_exists( export_file )) + fprintf(stderr,"** Warning: the file:%s with a list of runpath directories was not found - QC workflow wil probably fail.\n" , export_file); bool result = ert_workflow_list_run_workflow__( qc_module->workflow_list, qc_module->qc_workflow , verbose , self); return result; diff --git a/ThirdParty/Ert/devel/libenkf/src/run_arg.c b/ThirdParty/Ert/devel/libenkf/src/run_arg.c new file mode 100644 index 0000000000..55214feecb --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/src/run_arg.c @@ -0,0 +1,284 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'run_arg.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + + +#include +#include +#include + +#include +#include +#include + + +#define RUN_ARG_TYPE_ID 66143287 + + + +struct run_arg_struct { + UTIL_TYPE_ID_DECLARATION; + bool __ready; /* An attempt to check the internal state - not really used. */ + int iens; + bool active; /* Is this state object active at all - used for instance in ensemble experiments where only some of the members are integrated. */ + int init_step_parameters; /* The report step we initialize parameters from - will often be equal to step1, but can be different. */ + state_enum init_state_parameter; /* Whether we should init from a forecast or an analyzed state - parameters. */ + state_enum init_state_dynamic; /* Whether we should init from a forecast or an analyzed state - dynamic state variables. */ + int max_internal_submit; /* How many times the enkf_state object should try to resubmit when the queueu has said everything is OK - but the load fails. */ + int num_internal_submit; + int load_start; /* When loading back results - start at this step. */ + int step1; /* The forward model is integrated: step1 -> step2 */ + int step2; + int iter; + char * run_path; /* The currently used runpath - is realloced / freed for every step. */ + run_mode_type run_mode; /* What type of run this is */ + int queue_index; /* The job will in general have a different index in the queue than the iens number. */ + + enkf_fs_type * init_fs; + enkf_fs_type * result_fs; + enkf_fs_type * update_target_fs; + + /******************************************************************/ + /* Return value - set by the called routine!! */ + run_status_type run_status; +}; + + +UTIL_SAFE_CAST_FUNCTION( run_arg , RUN_ARG_TYPE_ID ) +UTIL_IS_INSTANCE_FUNCTION( run_arg , RUN_ARG_TYPE_ID ) + + +static run_arg_type * run_arg_alloc(enkf_fs_type * init_fs , + enkf_fs_type * result_fs , + enkf_fs_type * update_target_fs , + int iens , + run_mode_type run_mode , + int init_step_parameters , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + int iter , + const char * runpath) { + + run_arg_type * run_arg = util_malloc(sizeof * run_arg ); + UTIL_TYPE_ID_INIT(run_arg , RUN_ARG_TYPE_ID); + + run_arg->init_fs = init_fs; + run_arg->result_fs = result_fs; + run_arg->update_target_fs = update_target_fs; + + run_arg->iens = iens; + run_arg->run_mode = run_mode; + run_arg->init_step_parameters = init_step_parameters; + run_arg->init_state_parameter = init_state_parameter; + run_arg->init_state_dynamic = init_state_dynamic; + run_arg->step1 = step1; + run_arg->step2 = step2; + run_arg->iter = iter; + run_arg->run_path = util_alloc_abs_path( runpath ); + run_arg->num_internal_submit = 0; + + if (step1 == 0) + run_arg->load_start = 1; + else + run_arg->load_start = step1; + + return run_arg; +} + + +run_arg_type * run_arg_alloc_ENKF_ASSIMILATION(enkf_fs_type * fs , + int iens , + state_enum init_state_parameter , + state_enum init_state_dynamic , + int step1 , + int step2 , + const char * runpath) { + + return run_arg_alloc(fs,fs,fs,iens,ENKF_ASSIMILATION,step1 , init_state_parameter, init_state_dynamic , step1 , step2 , 0 , runpath); +} + + + +run_arg_type * run_arg_alloc_ENSEMBLE_EXPERIMENT(enkf_fs_type * fs , int iens , int iter , const char * runpath) { + return run_arg_alloc(fs , fs , NULL , iens , ENSEMBLE_EXPERIMENT , 0 , ANALYZED , ANALYZED , 0 , 0 , iter , runpath); +} + + +run_arg_type * run_arg_alloc_INIT_ONLY(enkf_fs_type * init_fs , int iens , int iter , const char * runpath) { + return run_arg_alloc(init_fs , NULL , NULL , iens , INIT_ONLY , 0 , ANALYZED , ANALYZED , 0 , 0 , iter , runpath); +} + + +run_arg_type * run_arg_alloc_SMOOTHER_RUN(enkf_fs_type * simulate_fs , enkf_fs_type * update_target_fs , int iens , int iter , const char * runpath) { + return run_arg_alloc(simulate_fs , simulate_fs , update_target_fs , iens , ENSEMBLE_EXPERIMENT , 0 , ANALYZED , ANALYZED , 0 , 0 , iter , runpath); +} + + + +void run_arg_free(run_arg_type * run_arg) { + util_safe_free(run_arg->run_path); + free(run_arg); +} + + +void run_arg_free__(void * arg) { + run_arg_type * run_arg = run_arg_safe_cast( arg ); + run_arg_free( run_arg ); +} + + +void run_arg_complete_run(run_arg_type * run_arg) { + if (run_arg->run_status == JOB_RUN_OK) { + util_safe_free(run_arg->run_path); + run_arg->run_path = NULL; + } +} + + + +void run_arg_increase_submit_count( run_arg_type * run_arg ) { + run_arg->num_internal_submit++; +} + + +void run_arg_set_queue_index( run_arg_type * run_arg , int queue_index) { + run_arg->queue_index = queue_index; +} + + + +const char * run_arg_get_runpath( const run_arg_type * run_arg) { + return run_arg->run_path; +} + + + + +int run_arg_get_iter( const run_arg_type * run_arg ) { + return run_arg->iter; +} + + +int run_arg_get_iens( const run_arg_type * run_arg ) { + return run_arg->iens; +} + + +int run_arg_get_load_start( const run_arg_type * run_arg ) { + return run_arg->load_start; +} + + +bool run_arg_is_ready( const run_arg_type * run_arg) { + return run_arg->__ready; +} + + +void run_arg_set_ready( run_arg_type * run_arg , bool ready) { + run_arg->__ready = ready; +} + + +int run_arg_get_step2( const run_arg_type * run_arg ) { + return run_arg->step2; +} + +bool run_arg_can_retry( const run_arg_type * run_arg ) { + if (run_arg->num_internal_submit < run_arg->max_internal_submit) + return true; + else + return false; +} + + +int run_arg_get_step1( const run_arg_type * run_arg ) { + return run_arg->step1; +} + + +run_mode_type run_arg_get_run_mode( const run_arg_type * run_arg ) { + return run_arg->run_mode; +} + +state_enum run_arg_get_dynamic_init_state( const run_arg_type * run_arg ) { + return run_arg->init_state_dynamic; +} + + +state_enum run_arg_get_parameter_init_state( const run_arg_type * run_arg ) { + return run_arg->init_state_parameter; +} + + + +int run_arg_get_parameter_init_step( const run_arg_type * run_arg ) { + return run_arg->init_step_parameters; +} + + + +void run_arg_set_inactive( run_arg_type * run_arg ) { + run_arg->active = false; +} + + +int run_arg_get_queue_index( const run_arg_type * run_arg ) { + return run_arg->queue_index; +} + + +run_status_type run_arg_get_run_status( const run_arg_type * run_arg) { + return run_arg->run_status; +} + + +void run_arg_set_run_status( run_arg_type * run_arg , run_status_type run_status) { + run_arg->run_status = run_status; +} + + + +enkf_fs_type * run_arg_get_init_fs(const run_arg_type * run_arg) { + if (run_arg->init_fs) + return run_arg->init_fs; + else { + util_abort("%s: internal error - tried to access run_arg->init_fs when init_fs == NULL\n",__func__); + return NULL; + } +} + + +enkf_fs_type * run_arg_get_result_fs(const run_arg_type * run_arg) { + if (run_arg->result_fs) + return run_arg->result_fs; + else { + util_abort("%s: internal error - tried to access run_arg->result_fs when result_fs == NULL\n",__func__); + return NULL; + } +} + + +enkf_fs_type * run_arg_get_update_target_fs(const run_arg_type * run_arg) { + if (run_arg->update_target_fs) + return run_arg->update_target_fs; + else { + util_abort("%s: internal error - tried to access run_arg->update_target_fs when update_target_fs == NULL\n",__func__); + return NULL; + } +} diff --git a/ThirdParty/Ert/devel/libenkf/src/runpath_list.c b/ThirdParty/Ert/devel/libenkf/src/runpath_list.c index 56420bb24d..9d111d2aaa 100644 --- a/ThirdParty/Ert/devel/libenkf/src/runpath_list.c +++ b/ThirdParty/Ert/devel/libenkf/src/runpath_list.c @@ -34,6 +34,7 @@ struct runpath_list_struct { pthread_rwlock_t lock; vector_type * list; char * line_fmt; // Format string : Values are in the order: (iens , runpath , basename) + char * export_file; }; @@ -103,10 +104,11 @@ static void runpath_node_fprintf( const runpath_node_type * node , const char * /*****************************************************************/ -runpath_list_type * runpath_list_alloc() { +runpath_list_type * runpath_list_alloc(const char * export_file) { runpath_list_type * list = util_malloc( sizeof * list ); list->list = vector_alloc_new(); list->line_fmt = NULL; + list->export_file = util_alloc_string_copy( export_file ); pthread_rwlock_init( &list->lock , NULL ); return list; } @@ -115,6 +117,7 @@ runpath_list_type * runpath_list_alloc() { void runpath_list_free( runpath_list_type * list ) { vector_free( list->list ); util_safe_free( list->line_fmt ); + util_safe_free( list->export_file); free( list ); } @@ -196,15 +199,27 @@ int runpath_list_iget_iter( runpath_list_type * list , int index) { return node->iter; } -void runpath_list_fprintf(runpath_list_type * list , FILE * stream) { +void runpath_list_fprintf(runpath_list_type * list ) { pthread_rwlock_rdlock( &list->lock ); { + FILE * stream = util_fopen( list->export_file , "w"); const char * line_fmt = runpath_list_get_line_fmt( list ); int index; for (index =0; index < vector_get_size( list->list ); index++) { const runpath_node_type * node = runpath_list_iget_node__( list , index ); runpath_node_fprintf( node , line_fmt , stream ); } + fclose( stream ); } pthread_rwlock_unlock( &list->lock ); } + + +const char * runpath_list_get_export_file( const runpath_list_type * list ) { + return list->export_file; +} + + +void runpath_list_set_export_file( runpath_list_type * list , const char * export_file ) { + list->export_file = util_realloc_string_copy( list->export_file , export_file ); +} diff --git a/ThirdParty/Ert/devel/libenkf/src/time_map.c b/ThirdParty/Ert/devel/libenkf/src/time_map.c index edc3615c33..9cec901f4c 100644 --- a/ThirdParty/Ert/devel/libenkf/src/time_map.c +++ b/ThirdParty/Ert/devel/libenkf/src/time_map.c @@ -592,7 +592,7 @@ int_vector_type * time_map_alloc_index_map( time_map_type * map , const ecl_sum_ time_t sum_time; while (true) { - sum_time = ecl_sum_iget_sim_time( ecl_sum , sum_index ); + sum_time = ecl_sum_get_report_time( ecl_sum , sum_index ); if (sum_time > map_time) { int day,month,year; diff --git a/ThirdParty/Ert/devel/libenkf/src/trans_func.c b/ThirdParty/Ert/devel/libenkf/src/trans_func.c index 2eafd80b2d..9b93ef87c0 100644 --- a/ThirdParty/Ert/devel/libenkf/src/trans_func.c +++ b/ThirdParty/Ert/devel/libenkf/src/trans_func.c @@ -78,6 +78,12 @@ static double trans_const(double x , const arg_pack_type * arg) { } +static double trans_raw(double x , const arg_pack_type * arg) { + return x; +} + + + /* Observe that the argument of the shift should be "+" */ static double trans_derrf(double x , const arg_pack_type * arg) { int steps = arg_pack_iget_int(arg , 0); @@ -364,8 +370,10 @@ trans_func_type * trans_func_alloc( const char * func_name ) { trans_func->func = trans_const; } - if (util_string_equal( func_name , "NONE")) - trans_func->func = trans_const; + + if (util_string_equal( func_name , "RAW")) { + trans_func->func = trans_raw; + } if (trans_func->func == NULL) diff --git a/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt index d5d3104418..dd151b052a 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libenkf/tests/CMakeLists.txt @@ -14,7 +14,17 @@ add_test( enkf_plot_data ${EXECUTABLE_OUTPUT_PATH}/enkf_plot_data) add_executable( enkf_gen_data_config enkf_gen_data_config.c ) target_link_libraries( enkf_gen_data_config enkf test_util ) -add_test( enkf_gen_data_config ${EXECUTABLE_OUTPUT_PATH}/enkf_gen_data_config) +add_test( enkf_gen_data_config ${EXECUTABLE_OUTPUT_PATH}/enkf_gen_data_config + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/gendata_test/RFT_E-3H_21 + ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/gendata_test/RFT_E-3H_21_empty) + +add_executable( enkf_ert_run_context enkf_ert_run_context.c ) +target_link_libraries( enkf_ert_run_context enkf test_util ) +add_test( enkf_ert_run_context ${EXECUTABLE_OUTPUT_PATH}/enkf_ert_run_context) + +add_executable( enkf_run_arg enkf_run_arg.c ) +target_link_libraries( enkf_run_arg enkf test_util ) +add_test( enkf_run_arg ${EXECUTABLE_OUTPUT_PATH}/enkf_run_arg) add_executable( enkf_gen_obs_load enkf_gen_obs_load.c ) target_link_libraries( enkf_gen_obs_load enkf test_util ) @@ -370,14 +380,6 @@ target_link_libraries( enkf_iter_config enkf test_util ) add_test( enkf_iter_config ${EXECUTABLE_OUTPUT_PATH}/enkf_iter_config ) -add_executable( enkf_state_runpath_test enkf_state_runpath_test.c ) -target_link_libraries( enkf_state_runpath_test enkf test_util ) -add_test( enkf_state_runpath_test ${EXECUTABLE_OUTPUT_PATH}/enkf_state_runpath_test - ${PROJECT_SOURCE_DIR}/test-data/Statoil/config/enkf_state_runpath - config_runpath_single_run - config_runpath_multiple_iterations ) - - add_executable( enkf_model_config enkf_model_config.c ) target_link_libraries( enkf_model_config enkf test_util ) add_test( enkf_model_config ${EXECUTABLE_OUTPUT_PATH}/enkf_model_config ) @@ -446,7 +448,6 @@ set_property( TEST enkf_export_field_test PROPERTY LABELS StatoilData ) set_property( TEST enkf_workflow_job_test PROPERTY LABELS StatoilData ) set_property( TEST enkf_select_case_job PROPERTY LABELS StatoilData ) set_property( TEST enkf_main_fs_current_file_test PROPERTY LABELS StatoilData ) -set_property( TEST enkf_state_runpath_test PROPERTY LABELS StatoilData ) set_property( TEST enkf_state_manual_load_test PROPERTY LABELS StatoilData ) set_property( TEST enkf_analysis_update_job PROPERTY LABELS StatoilData ) set_property( TEST enkf_analysis_enkf_update_job PROPERTY LABELS StatoilData ) @@ -457,3 +458,4 @@ set_property( TEST enkf_fs_invalidate_cache PROPERTY LABELS StatoilData ) set_property( TEST enkf_obs_fs PROPERTY LABELS StatoilData ) set_property( TEST enkf_obs_vector_fs PROPERTY LABELS StatoilData ) set_property( TEST enkf_magic_string_in_workflows PROPERTY LABELS StatoilData ) +set_property( TEST enkf_gen_data_config PROPERTY LABELS StatoilData ) diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_run_context.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_run_context.c new file mode 100644 index 0000000000..ea16a5cd71 --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_ert_run_context.c @@ -0,0 +1,104 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_run_context.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include +#include +#include + +#include +#include + +void test_create() { + bool_vector_type * iactive = bool_vector_alloc(10,true); + bool_vector_iset( iactive , 6 , false ); + bool_vector_iset( iactive , 8 , false ); + { + enkf_fs_type * init_fs = NULL; + enkf_fs_type * result_fs = NULL; + enkf_fs_type * update_target_fs = NULL; + subst_list_type * subst_list = subst_list_alloc( NULL ); + path_fmt_type * runpath_fmt = path_fmt_alloc_directory_fmt("/tmp/path/%04d"); + ert_run_context_type * context = ert_run_context_alloc_INIT_ONLY( init_fs , iactive , runpath_fmt , subst_list , INIT_CONDITIONAL , 13 ); + + test_assert_true( ert_run_context_is_instance( context )); + test_assert_int_equal( 8 , ert_run_context_get_size( context )); + + { + run_arg_type * run_arg0 = ert_run_context_iget_arg( context , 0 ); + + test_assert_int_equal( 13 , run_arg_get_iter( run_arg0 )); + test_assert_string_equal( "/tmp/path/0000" , run_arg_get_runpath( run_arg0 )); + + test_assert_true( run_arg_is_instance( run_arg0 )); + } + ert_run_context_free( context ); + path_fmt_free( runpath_fmt ); + } + bool_vector_free( iactive ); +} + + +void test_create_ENSEMBLE_EXPERIMENT() { + bool_vector_type * iactive = bool_vector_alloc(10,true); + bool_vector_iset( iactive , 0 , false ); + bool_vector_iset( iactive , 8 , false ); + { + subst_list_type * subst_list = subst_list_alloc( NULL ); + path_fmt_type * runpath_fmt = path_fmt_alloc_directory_fmt("/tmp/path/%04d/%d"); + enkf_fs_type * fs = NULL; + ert_run_context_type * context = ert_run_context_alloc_ENSEMBLE_EXPERIMENT( fs, iactive , runpath_fmt , subst_list , INIT_CONDITIONAL , 7 ); + + test_assert_true( ert_run_context_is_instance( context )); + test_assert_int_equal( 8 , ert_run_context_get_size( context )); + + { + run_arg_type * run_arg0 = ert_run_context_iens_get_arg( context , 0 ); + run_arg_type * run_arg2 = ert_run_context_iens_get_arg( context , 2 ); + run_arg_type * run_argi = ert_run_context_iget_arg( context , 1 ); + + test_assert_NULL( run_arg0 ); + test_assert_true( run_arg_is_instance( run_argi )); + test_assert_ptr_equal( run_arg2 , run_argi); + } + + { + run_arg_type * run_arg1 = ert_run_context_iget_arg( context , 1 ); + + test_assert_int_equal( 7 , run_arg_get_iter( run_arg1 )); + test_assert_string_equal( "/tmp/path/0002/7" , run_arg_get_runpath( run_arg1 )); + + test_assert_true( run_arg_is_instance( run_arg1 )); + } + ert_run_context_free( context ); + path_fmt_free( runpath_fmt ); + } + bool_vector_free( iactive ); +} + + + + + + + +int main( int argc , char ** argv) { + test_create(); + test_create_ENSEMBLE_EXPERIMENT(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c index 6da2da06ef..6ec0c4c722 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_export_inactive_cells.c @@ -24,13 +24,18 @@ #include #include -#include -#include -#include #include #include + #include +#include +#include +#include +#include + + + void check_exported_data(const char * exported_file, const char * init_file, @@ -118,11 +123,8 @@ void forward_initialize_node(enkf_main_type * enkf_main, const char * init_file, const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0, false); bool_vector_iset( iactive , ens_size - 1 , true ); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false); bool_vector_free(iactive); } @@ -131,8 +133,9 @@ void forward_initialize_node(enkf_main_type * enkf_main, const char * init_file, enkf_state_type * state = enkf_main_iget_state( enkf_main , iens ); enkf_fs_type * fs = enkf_main_get_fs(enkf_main); int error = 0; + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 ,0 , "simulations/run0"); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); } } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c index ac833276dc..6763b6bd1d 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_FIELD.c @@ -33,11 +33,8 @@ void create_runpath(enkf_main_type * enkf_main ) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -88,6 +85,7 @@ int main(int argc , char ** argv) { enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); enkf_node_type * field_node = enkf_state_get_node( state , "PORO" ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 ,0 , "simulations/run0"); node_id_type node_id = {.report_step = 0 , .iens = 0, .state = ANALYZED }; @@ -99,20 +97,13 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - bool_vector_free( iactive ); - } - test_assert_false( enkf_node_has_data( field_node , fs, node_id )); util_unlink_existing( "simulations/run0/petro.grdecl" ); test_assert_false(enkf_node_forward_init(field_node, "simulations/run0", 0)); - enkf_state_forward_init(state, fs, &error); + enkf_state_forward_init(state, run_arg , &error); test_assert_true(LOAD_FAILURE & error); error = 0; @@ -121,7 +112,7 @@ int main(int argc , char ** argv) { state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map, 0, STATE_INITIALIZED); } - enkf_state_load_from_forward_model(state, fs, &error, false, msg_list); + enkf_state_load_from_forward_model(state, run_arg , &error, false, msg_list); stringlist_free(msg_list); test_assert_true(LOAD_FAILURE & error); } @@ -132,18 +123,10 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - bool_vector_free( iactive ); - } - - test_assert_true( enkf_node_forward_init( field_node , "simulations/run0" , 0)); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_int_equal( error, 0 ); - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); test_assert_int_equal(error, 0); @@ -165,6 +148,7 @@ int main(int argc , char ** argv) { test_assert_double_equal( 0.130251303315 , value); } util_clear_directory( "simulations" , true , true ); + run_arg_free( run_arg ); } enkf_main_free( enkf_main ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c index 57bbe9bf3b..be15e6c4fe 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_KW.c @@ -27,17 +27,15 @@ #include #include +#include void create_runpath(enkf_main_type * enkf_main ) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -85,6 +83,7 @@ int main(int argc , char ** argv) { if (forward_init) { enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 , 0 , "simulations/run0"); enkf_node_type * gen_kw_node = enkf_state_get_node( state , "MULTFLT" ); node_id_type node_id = {.report_step = 0 , .iens = 0, @@ -98,18 +97,12 @@ int main(int argc , char ** argv) { stringlist_type * msg_list = stringlist_alloc_new(); bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - } - - test_assert_false( enkf_node_has_data( gen_kw_node , fs, node_id )); util_unlink_existing( "simulations/run0/MULTFLT_INIT" ); test_assert_false( enkf_node_forward_init( gen_kw_node , "simulations/run0" , 0 )); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_true(LOAD_FAILURE & error); error = 0; @@ -118,7 +111,7 @@ int main(int argc , char ** argv) { state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map , 0 , STATE_INITIALIZED); } - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); bool_vector_free( iactive ); test_assert_true(LOAD_FAILURE & error); @@ -136,18 +129,10 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ - bool_vector_free( iactive ); - } - - test_assert_true( enkf_node_forward_init( gen_kw_node , "simulations/run0" , 0 )); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_int_equal(0, error); - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); test_assert_int_equal(0, error); @@ -173,6 +158,7 @@ int main(int argc , char ** argv) { test_assert_double_equal( 123456.0 , value); } util_clear_directory( "simulations" , true , true ); + run_arg_free( run_arg ); } enkf_main_free( enkf_main ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c index 934fe7f460..f5253585ab 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_GEN_PARAM.c @@ -27,17 +27,15 @@ #include #include +#include void create_runpath(enkf_main_type * enkf_main ) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -85,6 +83,7 @@ int main(int argc , char ** argv) { if (forward_init) { enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 , 0 , "simulations/run0"); enkf_node_type * gen_param_node = enkf_state_get_node( state , "PARAM" ); node_id_type node_id = {.report_step = 0 , .iens = 0, @@ -93,16 +92,8 @@ int main(int argc , char ** argv) { create_runpath( enkf_main ); test_assert_true( util_is_directory( "simulations/run0" )); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - test_assert_false( enkf_node_has_data( gen_param_node , fs, node_id )); - util_unlink_existing( "simulations/run0/PARAM_INIT" ); - bool_vector_free( iactive ); - } - - + test_assert_false( enkf_node_has_data( gen_param_node , fs, node_id )); + util_unlink_existing( "simulations/run0/PARAM_INIT" ); { FILE * stream = util_fopen("simulations/run0/PARAM_INIT" , "w"); @@ -114,23 +105,16 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ - bool_vector_free( iactive ); - } - test_assert_true( enkf_node_forward_init( gen_param_node , "simulations/run0" , 0 )); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_int_equal(0, error); { enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map , 0 , STATE_INITIALIZED); } - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); test_assert_int_equal(0, error); @@ -162,6 +146,7 @@ int main(int argc , char ** argv) { test_assert_double_equal( 3 , v3); } util_clear_directory( "simulations" , true , true ); + run_arg_free( run_arg ); } enkf_main_free( enkf_main ); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c index 8eca4f3565..65cafdc931 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_SURFACE.c @@ -27,17 +27,14 @@ #include #include - +#include void create_runpath(enkf_main_type * enkf_main ) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -89,6 +86,7 @@ int main(int argc , char ** argv) { if (forward_init) { enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 ,0 , "simulations/run0"); enkf_node_type * surface_node = enkf_state_get_node( state , "SURFACE" ); node_id_type node_id = {.report_step = 0 , .iens = 0, @@ -101,20 +99,13 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - bool_vector_free( iactive ); - } - - + test_assert_false( enkf_node_has_data( surface_node , fs, node_id )); util_unlink_existing( "simulations/run0/Surface.irap" ); test_assert_false( enkf_node_forward_init( surface_node , "simulations/run0" , 0 )); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_true(LOAD_FAILURE & error); error = 0; @@ -123,7 +114,7 @@ int main(int argc , char ** argv) { state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map, 0, STATE_INITIALIZED); } - enkf_state_load_from_forward_model(state, fs, &error, false, msg_list); + enkf_state_load_from_forward_model(state, run_arg , &error, false, msg_list); stringlist_free( msg_list ); test_assert_true(LOAD_FAILURE & error); @@ -135,17 +126,11 @@ int main(int argc , char ** argv) { int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE ); /* This is ugly */ - bool_vector_free( iactive ); - } test_assert_true( enkf_node_forward_init( surface_node , "simulations/run0" , 0 )); - enkf_state_forward_init( state , fs , &error ); + enkf_state_forward_init( state , run_arg , &error ); test_assert_int_equal(0, error); - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); test_assert_int_equal(0, error); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c index ec1b2e2083..6855d78ef6 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_forward_init_transform.c @@ -24,20 +24,23 @@ #include #include +#include + #include +#include #include -#include + + + + void create_runpath(enkf_main_type * enkf_main ) { const int ens_size = enkf_main_get_ensemble_size( enkf_main ); bool_vector_type * iactive = bool_vector_alloc(0,false); - state_enum init_state = ANALYZED; - int start_report = 0; - int init_step_parameters = 0; bool_vector_iset( iactive , ens_size - 1 , true ); - enkf_main_run_exp(enkf_main , iactive , false , init_step_parameters , start_report , init_state); + enkf_main_run_exp(enkf_main , iactive , false ); bool_vector_free(iactive); } @@ -75,7 +78,9 @@ int main(int argc , char ** argv) { bool strict = true; enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); + enkf_fs_type * init_fs = enkf_main_get_fs(enkf_main); enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT( init_fs , 0 ,0 , "simulations/run0"); enkf_node_type * field_node = enkf_state_get_node( state , "PORO" ); bool forward_init; @@ -92,13 +97,10 @@ int main(int argc , char ** argv) { util_copy_file( init_file , "simulations/run0/petro.grdecl"); { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ int error = 0; stringlist_type * msg_list = stringlist_alloc_new(); - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); bool_vector_free( iactive ); test_assert_int_equal(error, 0); @@ -106,6 +108,7 @@ int main(int argc , char ** argv) { test_assert_true(check_original_exported_data_equal(field_node)); + run_arg_free( run_arg ); enkf_main_free(enkf_main); test_work_area_free(work_area); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c index 89ab07ddf9..c43975b1ad 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_fs.c @@ -37,7 +37,7 @@ void test_mount() { test_work_area_type * work_area = test_work_area_alloc("enkf_fs/mount"); test_assert_false( enkf_fs_exists( "mnt" )); - enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); + test_assert_NULL( enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL , false)); test_assert_true( enkf_fs_exists( "mnt" )); { enkf_fs_type * fs = enkf_fs_mount( "mnt" ); @@ -46,7 +46,13 @@ void test_mount() { enkf_fs_decref( fs ); test_assert_false( util_file_exists("mnt/mnt.lock")); } + { + enkf_fs_type * fs = enkf_fs_create_fs( "mnt2" , BLOCK_FS_DRIVER_ID , NULL , true); + test_assert_true( enkf_fs_is_instance( fs )); + enkf_fs_decref( fs ); + } + test_work_area_free( work_area ); } @@ -54,7 +60,7 @@ void test_mount() { void test_refcount() { test_work_area_type * work_area = test_work_area_alloc("enkf_fs/refcount"); - enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); + enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL , false); { enkf_fs_type * fs = enkf_fs_mount( "mnt" ); test_assert_int_equal( 1 , enkf_fs_get_refcount( fs )); @@ -111,7 +117,7 @@ void test_fwrite_readonly( void * arg ) { */ void test_read_only2() { test_work_area_type * work_area = test_work_area_alloc("enkf_fs/read_only2"); - enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL ); + enkf_fs_create_fs("mnt" , BLOCK_FS_DRIVER_ID , NULL , false); createFS(); while (true) { diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c index 5b7ea5a051..4d0037ff36 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_gen_data_config.c @@ -25,7 +25,9 @@ #include #include +#include #include +#include void test_report_steps_param() { @@ -90,7 +92,42 @@ void test_report_steps_dynamic() { } +void test_gendata_fload(const char * filename) { + test_work_area_type * work_area = test_work_area_alloc( "test_gendata_fload"); + gen_data_config_type * config = gen_data_config_alloc_GEN_DATA_result("KEY" , ASCII); + gen_data_type * gen_data = gen_data_alloc(config); + + const char * cwd = test_work_area_get_cwd(work_area); + enkf_fs_type * write_fs = enkf_fs_create_fs(cwd, BLOCK_FS_DRIVER_ID, NULL , true); + gen_data_config_set_write_fs(config, write_fs); + gen_data_fload(gen_data, filename); + int data_size = gen_data_config_get_data_size(config, 0); + test_assert_true(data_size > 0); + enkf_fs_decref( write_fs ); + + gen_data_free(gen_data); + gen_data_config_free( config ); + test_work_area_free(work_area); +} + +void test_gendata_fload_empty_file(const char * filename) { + test_work_area_type * work_area = test_work_area_alloc( "test_gendata_fload_empty_file" ); + gen_data_config_type * config = gen_data_config_alloc_GEN_DATA_result("KEY" , ASCII); + gen_data_type * gen_data = gen_data_alloc(config); + + const char * cwd = test_work_area_get_cwd(work_area); + enkf_fs_type * write_fs = enkf_fs_create_fs(cwd, BLOCK_FS_DRIVER_ID, NULL , true); + gen_data_config_set_write_fs(config, write_fs); + gen_data_fload(gen_data, filename); + int data_size = gen_data_config_get_data_size(config, 0); + test_assert_true(data_size == 0); + enkf_fs_decref( write_fs ); + + gen_data_free(gen_data); + gen_data_config_free( config ); + test_work_area_free(work_area); +} void test_result_format() { @@ -304,6 +341,9 @@ void test_set_template() { int main(int argc , char ** argv) { + const char * gendata_file = argv[1]; + const char * gendata_file_empty = argv[2]; + test_report_steps_param(); test_report_steps_dynamic(); test_result_format(); @@ -311,6 +351,8 @@ int main(int argc , char ** argv) { test_set_template_invalid(); test_set_invalid_format(); test_format_check(); + test_gendata_fload(gendata_file); + test_gendata_fload_empty_file(gendata_file_empty); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_main.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_main.c index e24437bb1f..7566a33261 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_main.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_main.c @@ -37,7 +37,7 @@ void test_case_initialized() { model_config_type * model_config = enkf_main_get_model_config(enkf_main); const char * new_case = "fs/case"; char * mount_point = util_alloc_sprintf("%s/%s" , model_config_get_enspath(model_config) , new_case); - enkf_fs_create_fs(mount_point , BLOCK_FS_DRIVER_ID , NULL); + enkf_fs_create_fs(mount_point , BLOCK_FS_DRIVER_ID , NULL , false); test_assert_false(enkf_main_case_is_initialized(enkf_main , "does/not/exist" , NULL)); test_assert_true(enkf_main_case_is_initialized(enkf_main , new_case , NULL)); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_run_arg.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_run_arg.c new file mode 100644 index 0000000000..df1401a04d --- /dev/null +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_run_arg.c @@ -0,0 +1,110 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'ert_run_context.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ +#include + +#include +#include +#include +#include + +#include +#include +#include + +void call_get_result_fs( void * arg ) { + run_arg_type * run_arg = run_arg_safe_cast( arg ); + run_arg_get_result_fs( run_arg ); +} + + +void call_get_update_target_fs( void * arg ) { + run_arg_type * run_arg = run_arg_safe_cast( arg ); + run_arg_get_update_target_fs( run_arg ); +} + + + +void test_SMOOTHER_RUN( ) { + test_work_area_type * test_area = test_work_area_alloc("run_arg/SMOOTHER"); + { + enkf_fs_type * sim_fs = enkf_fs_create_fs("sim" , BLOCK_FS_DRIVER_ID , NULL , true); + enkf_fs_type * target_fs = enkf_fs_create_fs("target" , BLOCK_FS_DRIVER_ID , NULL , true); + + run_arg_type * run_arg = run_arg_alloc_SMOOTHER_RUN(sim_fs , target_fs , 0 , 6 , "path"); + test_assert_true( run_arg_is_instance( run_arg )); + test_assert_ptr_equal( run_arg_get_init_fs( run_arg ) , sim_fs ); + test_assert_ptr_equal( run_arg_get_result_fs( run_arg ) , sim_fs ); + test_assert_ptr_equal( run_arg_get_update_target_fs( run_arg ) , target_fs ); + run_arg_free( run_arg ); + + enkf_fs_decref( sim_fs ); + enkf_fs_decref( target_fs ); + } + test_work_area_free( test_area ); +} + + +void test_INIT_ONLY( ) { + test_work_area_type * test_area = test_work_area_alloc("run_arg/INIT"); + { + enkf_fs_type * init_fs = enkf_fs_create_fs("sim" , BLOCK_FS_DRIVER_ID , NULL , true); + + run_arg_type * run_arg = run_arg_alloc_INIT_ONLY(init_fs , 0 , 6 , "path"); + test_assert_true( run_arg_is_instance( run_arg )); + test_assert_ptr_equal( run_arg_get_init_fs( run_arg ) , init_fs ); + + test_assert_util_abort( "run_arg_get_result_fs" , call_get_result_fs , run_arg ); + test_assert_util_abort( "run_arg_get_update_target_fs" , call_get_update_target_fs , run_arg ); + run_arg_free( run_arg ); + + enkf_fs_decref( init_fs ); + } + test_work_area_free( test_area ); +} + + +void test_ENSEMBLE_EXPERIMENT( ) { + test_work_area_type * test_area = test_work_area_alloc("run_arg/ENS"); + { + enkf_fs_type * fs = enkf_fs_create_fs("sim" , BLOCK_FS_DRIVER_ID , NULL , true); + + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT(fs , 0 , 6 , "path"); + test_assert_true( run_arg_is_instance( run_arg )); + + test_assert_ptr_equal( run_arg_get_init_fs( run_arg ) , fs ); + test_assert_ptr_equal( run_arg_get_result_fs( run_arg ) , fs ); + test_assert_util_abort( "run_arg_get_update_target_fs" , call_get_update_target_fs , run_arg ); + + run_arg_free( run_arg ); + enkf_fs_decref( fs ); + } + test_work_area_free( test_area ); +} + +void test_ENKF_ASSIMILATION( ) { + test_work_area_type * test_area = test_work_area_alloc("run_arg/ENS"); + test_work_area_free( test_area ); +} + +int main(int argc , char ** argv) { + test_SMOOTHER_RUN(); + test_INIT_ONLY(); + test_ENSEMBLE_EXPERIMENT(); + test_ENKF_ASSIMILATION(); + exit(0); +} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c index 14786e43b3..d0083cb0bf 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_runpath_list.c @@ -43,7 +43,7 @@ void * add_pathlist( void * arg ) { } void test_runpath_list() { - runpath_list_type * list = runpath_list_alloc(); + runpath_list_type * list = runpath_list_alloc("DefaultFile"); test_assert_int_equal( runpath_list_size( list ) , 0 ); @@ -102,20 +102,14 @@ void test_runpath_list() { { test_work_area_type * work_area = test_work_area_alloc("enkf_runpath_list" ); - const char *filename = "runpath_list.txt"; - { - FILE * stream = util_fopen( filename, "w"); - runpath_list_fprintf( list , stream ); - fclose( stream ); - } - + runpath_list_fprintf( list ); { int file_iens; int file_iter; char file_path[256]; char file_base[256]; int iens; - FILE * stream = util_fopen( filename, "r"); + FILE * stream = util_fopen( runpath_list_get_export_file(list) , "r"); for (iens = 0; iens < threads * block_size; iens++) { int fscanf_return = fscanf( stream , "%d %s %s %d" , &file_iens , file_path , file_base, &file_iter); test_assert_int_equal(fscanf_return, 4 ); @@ -136,7 +130,7 @@ void test_config( const char * config_file ) { ert_test_context_type * test_context = ert_test_context_alloc( "RUNPATH_FILE" , config_file , NULL ); enkf_main_type * enkf_main = ert_test_context_get_main( test_context ); qc_module_type * qc_module = enkf_main_get_qc_module( enkf_main ); - + ert_test_context_run_worklow( test_context , "ARGECHO_WF"); { FILE * stream = util_fopen("runpath_list.txt" , "r"); @@ -150,11 +144,18 @@ void test_config( const char * config_file ) { } - +void test_filename() { + runpath_list_type * list = runpath_list_alloc("DefaultFile"); + test_assert_string_equal( "DefaultFile" , runpath_list_get_export_file(list)); + runpath_list_set_export_file( list , "/tmp/file.txt"); + test_assert_string_equal( "/tmp/file.txt" , runpath_list_get_export_file(list)); + runpath_list_free( list ); +} int main(int argc , char ** argv) { test_runpath_list(); test_config( argv[1] ); + test_filename(); exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c index f487b3d387..b8a8feb7c3 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_manual_load_test.c @@ -26,60 +26,38 @@ #include #include +#include int test_load_manually_to_new_case(enkf_main_type * enkf_main) { - const char * casename = "new_case"; - enkf_main_select_fs( enkf_main , casename ); - - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - int result = 0; - int step1 = 1; - int step2 = 1; - + int result = 0; + int iens = 0; + int iter = 0; + const char * casename = "new_case"; + enkf_main_select_fs( enkf_main , casename ); + + + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT(fs , iens , iter , "simulations/run0"); + { arg_pack_type * arg_pack = arg_pack_alloc(); - arg_pack_append_ptr( arg_pack , enkf_main_iget_state(enkf_main, 0)); /* 0: */ - arg_pack_append_ptr( arg_pack , fs ); /* 1: */ - arg_pack_append_int( arg_pack , step1 ); /* 2: This will be the load start parameter for the run_info struct. */ - arg_pack_append_int( arg_pack , step1 ); /* 3: Step1 */ - arg_pack_append_int( arg_pack , step2 ); /* 4: Step2 For summary data it will load the whole goddamn thing anyway.*/ - arg_pack_append_bool( arg_pack , true ); /* 5: Interactive */ - arg_pack_append_owned_ptr( arg_pack , stringlist_alloc_new() , stringlist_free__); /* 6: List of interactive mode messages. */ - arg_pack_append_bool( arg_pack, true ); /* 7: Manual load */ - arg_pack_append_int( arg_pack , 0 ); /* 8: iter */ - arg_pack_append_ptr( arg_pack, &result ); /* 9: Result */ + arg_pack_append_ptr( arg_pack , enkf_main_iget_state(enkf_main, 0)); + arg_pack_append_ptr( arg_pack , run_arg ); + arg_pack_append_bool( arg_pack , true ); + arg_pack_append_owned_ptr( arg_pack , stringlist_alloc_new() , stringlist_free__); + arg_pack_append_bool( arg_pack, true ); + arg_pack_append_ptr( arg_pack, &result ); enkf_state_load_from_forward_model_mt(arg_pack); - arg_pack_free(arg_pack); - return result; -} - - - -void initialize(enkf_main_type * enkf_main) { - - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - - int step1 = 1; - int step2 = 1; - enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); - bool active = true; - int max_internal_sumbit = 1; - int init_step_parameter = 1; - state_enum init_state_parameter = FORECAST; - state_enum init_state_dynamic = FORECAST; - int load_start = 1; - - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); + } - bool_vector_free( iactive ); + return result; } + int main(int argc , char ** argv) { enkf_main_install_SIGNALS(); const char * root_path = argv[1]; @@ -87,17 +65,16 @@ int main(int argc , char ** argv) { test_work_area_type * work_area = test_work_area_alloc(config_file); test_work_area_copy_directory_content( work_area , root_path ); - - bool strict = true; - enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); - - initialize(enkf_main); - - test_assert_int_equal(test_load_manually_to_new_case(enkf_main), 0); - - enkf_main_free( enkf_main ); + { + bool strict = true; + enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); + + test_assert_int_equal( 0 , test_load_manually_to_new_case(enkf_main)); + + enkf_main_free( enkf_main ); + } test_work_area_free(work_area); - + exit(0); } diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c index 9f22748831..2027cc30a0 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_report_step_compatible.c @@ -25,6 +25,7 @@ #include #include +#include bool check_ecl_sum_compatible(const enkf_main_type * enkf_main) @@ -32,13 +33,14 @@ bool check_ecl_sum_compatible(const enkf_main_type * enkf_main) stringlist_type * msg_list = stringlist_alloc_new(); enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); - + run_arg_type * run_arg = run_arg_alloc_ENSEMBLE_EXPERIMENT(fs , 0 , 0 , "simulations/run0"); + state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map, 0, STATE_INITIALIZED); int error = 0; - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state , run_arg , &error , false , msg_list ); stringlist_free( msg_list ); return (REPORT_STEP_INCOMPATIBLE & error) ? false : true; @@ -61,26 +63,8 @@ int main(int argc , char ** argv) { bool strict = true; enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true ); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - - enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); - bool active = true; - int max_internal_sumbit = 1; - int init_step_parameter = 1; - state_enum init_state_parameter = FORECAST; - state_enum init_state_dynamic = FORECAST; - int load_start = 1; - int step1 = 1; - int step2 = 1; - - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - bool_vector_free( iactive ); - } - - test_assert_bool_equal(check_compatible, check_ecl_sum_compatible(enkf_main)); + + test_assert_bool_equal(check_compatible , check_ecl_sum_compatible(enkf_main)); enkf_main_free( enkf_main ); test_work_area_free(work_area); diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c deleted file mode 100644 index e67cfe0b44..0000000000 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_runpath_test.c +++ /dev/null @@ -1,106 +0,0 @@ -/* - Copyright (C) 2013 Statoil ASA, Norway. - - The file 'enkf_state_runpath_test.c' is part of ERT - Ensemble based Reservoir Tool. - - ERT is free software: you can redistribute it and/or modify - it under the terms of the GNU General Public License as published by - the Free Software Foundation, either version 3 of the License, or - (at your option) any later version. - - ERT is distributed in the hope that it will be useful, but WITHOUT ANY - WARRANTY; without even the implied warranty of MERCHANTABILITY or - FITNESS FOR A PARTICULAR PURPOSE. - - See the GNU General Public License at - for more details. -*/ -#include -#include -#include -#include - -#include -#include -#include - -#include - - - -int main(int argc , char ** argv) { - - enkf_main_install_SIGNALS(); - const char * root_path = argv[1]; - const char * config_file_single_run = argv[2]; - const char * config_file_multiple_iter = argv[3]; - - test_work_area_type * work_area = test_work_area_alloc("enkf_state_runpath_test"); - test_work_area_copy_directory_content( work_area , root_path ); - test_work_area_set_store(work_area, true); - - - { - enkf_state_type * state = NULL; - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool strict = true; - - bool active = true; - int max_internal_sumbit = 1; - int init_step_parameter = 1; - state_enum init_state_parameter = FORECAST; - state_enum init_state_dynamic = FORECAST; - int load_start = 1; - int step1 = 1; - int step2 = 1; - - const char * cwd = test_work_area_get_cwd(work_area); - - { - enkf_main_type * enkf_main_single_run = enkf_main_bootstrap( NULL , config_file_single_run , strict , true ); - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main_single_run ) , true ); - enkf_main_init_run(enkf_main_single_run , iactive , run_mode , INIT_NONE); /* This is ugly */ - - state = enkf_main_iget_state( enkf_main_single_run , 0 ); - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - char * path_single_run0 = util_alloc_sprintf("%s/sim/run0", cwd); - test_assert_string_equal(enkf_state_get_run_path(state), path_single_run0); - - state = enkf_main_iget_state( enkf_main_single_run, 1); - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - char * path_single_run1 = util_alloc_sprintf("%s/sim/run1", cwd); - test_assert_string_equal(enkf_state_get_run_path(state), path_single_run1); - - free(path_single_run0); - free(path_single_run1); - bool_vector_free( iactive ); - enkf_main_free(enkf_main_single_run); - } - - - { - enkf_main_type * enkf_main_iter = enkf_main_bootstrap( NULL , config_file_multiple_iter , strict , true ); - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main_iter ) , true ); - enkf_main_init_run(enkf_main_iter , iactive , run_mode , INIT_NONE); /* This is ugly */ - state = enkf_main_iget_state( enkf_main_iter , 0 ); - - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - char * path_iter0_run0 = util_alloc_sprintf("%s/sim/run0/iter0", cwd); - test_assert_string_equal(enkf_state_get_run_path(state), path_iter0_run0); - - state = enkf_main_iget_state( enkf_main_iter , 1 ); - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 1, step1, step2); - char * path_iter1_run1 = util_alloc_sprintf("%s/sim/run1/iter1", cwd); - test_assert_string_equal(enkf_state_get_run_path(state), path_iter1_run1); - - free(path_iter0_run0); - free(path_iter1_run1); - bool_vector_free( iactive ); - enkf_main_free(enkf_main_iter); - } - } - - - test_work_area_free(work_area); - exit(0); -} diff --git a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c index 54bda07bad..05042a51ac 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/enkf_state_skip_summary_load_test.c @@ -25,23 +25,27 @@ #include #include +#include bool check_ecl_sum_loaded(const enkf_main_type * enkf_main) { + enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); stringlist_type * msg_list = stringlist_alloc_new(); - enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + enkf_state_type * state1 = enkf_main_iget_state( enkf_main , 0 ); + run_arg_type * run_arg1 = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 , 0 , "simulations/run0"); enkf_state_type * state2 = enkf_main_iget_state( enkf_main , 1 ); - enkf_fs_type * fs = enkf_main_get_fs( enkf_main ); + run_arg_type * run_arg2 = run_arg_alloc_ENSEMBLE_EXPERIMENT( fs , 0 , 0 , "simulations/run1"); + state_map_type * state_map = enkf_fs_get_state_map(fs); state_map_iset(state_map, 0, STATE_INITIALIZED); int error = 0; - enkf_state_load_from_forward_model( state , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state1 , run_arg1 , &error , false , msg_list ); state_map_iset(state_map, 1, STATE_INITIALIZED); - enkf_state_load_from_forward_model( state2 , fs , &error , false , msg_list ); + enkf_state_load_from_forward_model( state2 , run_arg2 , &error , false , msg_list ); stringlist_free( msg_list ); return (0 == error); @@ -60,28 +64,7 @@ int main(int argc , char ** argv) { bool strict = true; enkf_main_type * enkf_main = enkf_main_bootstrap( NULL , config_file , strict , true ); - { - run_mode_type run_mode = ENSEMBLE_EXPERIMENT; - bool_vector_type * iactive = bool_vector_alloc( enkf_main_get_ensemble_size(enkf_main) , true); - enkf_main_init_run(enkf_main , iactive , run_mode , INIT_NONE); /* This is ugly */ - - enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); - enkf_state_type * state2 = enkf_main_iget_state( enkf_main , 1 ); - bool active = true; - int max_internal_sumbit = 1; - int init_step_parameter = 1; - state_enum init_state_parameter = FORECAST; - state_enum init_state_dynamic = FORECAST; - int load_start = 1; - int step1 = 1; - int step2 = 1; - - enkf_state_init_run(state, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - enkf_state_init_run(state2, run_mode, active, max_internal_sumbit, init_step_parameter, init_state_parameter, init_state_dynamic, load_start, 0, step1, step2); - bool_vector_free( iactive ); - } - - test_assert_true(check_ecl_sum_loaded(enkf_main)); + test_assert_true( check_ecl_sum_loaded(enkf_main) ); enkf_main_free( enkf_main ); test_work_area_free(work_area); diff --git a/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c b/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c index 532413e398..0512ba60e4 100644 --- a/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c +++ b/ThirdParty/Ert/devel/libenkf/tests/gen_kw_test.c @@ -24,14 +24,15 @@ #include #include -#include -#include -#include - #include #include #include +#include +#include +#include +#include + void test_send_fortio_to_gen_kw_ecl_write(void * arg) { @@ -57,7 +58,9 @@ void test_send_fortio_to_gen_kw_ecl_write(void * arg) { void test_write_gen_kw_export_file(enkf_main_type * enkf_main) { test_assert_not_NULL(enkf_main); + enkf_fs_type * init_fs = enkf_main_get_fs( enkf_main ); enkf_state_type * state = enkf_main_iget_state( enkf_main , 0 ); + run_arg_type * run_arg = run_arg_alloc_INIT_ONLY( init_fs , 0 ,0 , "simulations/run0"); test_assert_not_NULL(state); enkf_node_type * enkf_node = enkf_state_get_node( state , "MULTFLT" ); test_assert_not_NULL(enkf_node); @@ -65,10 +68,10 @@ void test_write_gen_kw_export_file(enkf_main_type * enkf_main) test_assert_not_NULL(config_node); if (GEN_KW == enkf_config_node_get_impl_type(config_node)) { - enkf_fs_type * fs = enkf_main_get_fs(enkf_main); - enkf_state_ecl_write(state, fs); - test_assert_true(util_file_exists("parameters.txt")); + enkf_state_ecl_write(state, run_arg , init_fs); + test_assert_true(util_file_exists("simulations/run0/parameters.txt")); } + run_arg_free( run_arg ); } diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/lookup_table.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/lookup_table.h index 42a68536ed..b7243dcc3b 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/lookup_table.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/lookup_table.h @@ -28,17 +28,23 @@ extern "C" { typedef struct lookup_table_struct lookup_table_type; -void lookup_table_set_data( lookup_table_type * lt , double_vector_type * x , double_vector_type * y , bool data_owner ); -lookup_table_type * lookup_table_alloc( double_vector_type * x , double_vector_type * y , bool data_owner); -lookup_table_type * lookup_table_alloc_empty(); -void lookup_table_append( lookup_table_type * lt , double x , double y); -void lookup_table_free( lookup_table_type * lt ); -double lookup_table_interp( lookup_table_type * lt , double x); -double lookup_table_get_max_value( lookup_table_type * lookup_table ); -double lookup_table_get_min_value( lookup_table_type * lookup_table ); -double lookup_table_get_max_arg( lookup_table_type * lookup_table ); -double lookup_table_get_max_arg( lookup_table_type * lookup_table ); -int lookup_table_get_size( const lookup_table_type * lt ); + void lookup_table_set_data( lookup_table_type * lt , double_vector_type * x , double_vector_type * y , bool data_owner ); + lookup_table_type * lookup_table_alloc( double_vector_type * x , double_vector_type * y , bool data_owner); + lookup_table_type * lookup_table_alloc_empty(); + void lookup_table_append( lookup_table_type * lt , double x , double y); + void lookup_table_free( lookup_table_type * lt ); + double lookup_table_interp( lookup_table_type * lt , double x); + double lookup_table_get_max_value( lookup_table_type * lookup_table ); + double lookup_table_get_min_value( lookup_table_type * lookup_table ); + double lookup_table_get_max_arg( lookup_table_type * lookup_table ); + double lookup_table_get_max_arg( lookup_table_type * lookup_table ); + int lookup_table_get_size( const lookup_table_type * lt ); + void lookup_table_set_low_limit( lookup_table_type * lt , double limit); + bool lookup_table_has_low_limit(const lookup_table_type * lt ); + void lookup_table_set_high_limit( lookup_table_type * lt , double limit); + bool lookup_table_has_high_limit(const lookup_table_type * lt ); + + #ifdef __cplusplus } diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h index 836a27ccd2..1db5f55078 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/subst_list.h @@ -50,7 +50,7 @@ extern "C" { char * subst_list_alloc_filtered_string(const subst_list_type * , const char * ); void subst_list_filtered_fprintf(const subst_list_type * , const char * , FILE * ); int subst_list_get_size( const subst_list_type *); - const char * subst_list_get_value( subst_list_type * subst_list , const char * key); + const char * subst_list_get_value( const subst_list_type * subst_list , const char * key); const char * subst_list_iget_value( const subst_list_type * subst_list , int index); const char * subst_list_iget_key( const subst_list_type * subst_list , int index); const char * subst_list_iget_doc_string( const subst_list_type * subst_list , int index); diff --git a/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h b/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h index 0a2df6e834..2667157a95 100644 --- a/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h +++ b/ThirdParty/Ert/devel/libert_util/include/ert/util/type_macros.h @@ -72,7 +72,7 @@ type ## _type * type ## _safe_cast( void * __arg ) { if ( arg->__type_id == TYPE_ID) \ return arg; \ else { \ - util_abort("%s: runtime cast failed: Got ID:%d Expected: ID%d \n", __func__ , arg->__type_id , TYPE_ID); \ + util_abort("%s: runtime cast failed: Got ID:%d Expected ID:%d \n", __func__ , arg->__type_id , TYPE_ID); \ return NULL; \ } \ } \ @@ -91,7 +91,7 @@ const type ## _type * type ## _safe_cast_const( const void * __arg ) { if ( arg->__type_id == TYPE_ID) \ return arg; \ else { \ - util_abort("%s: runtime cast failed: Got ID:%d Expected: ID%d \n", __func__ , arg->__type_id , TYPE_ID); \ + util_abort("%s: runtime cast failed: Got ID:%d Expected ID:%d \n", __func__ , arg->__type_id , TYPE_ID); \ return NULL; \ } \ } \ diff --git a/ThirdParty/Ert/devel/libert_util/src/lookup_table.c b/ThirdParty/Ert/devel/libert_util/src/lookup_table.c index 5b2e9a5f65..cbf658d7b5 100644 --- a/ThirdParty/Ert/devel/libert_util/src/lookup_table.c +++ b/ThirdParty/Ert/devel/libert_util/src/lookup_table.c @@ -33,7 +33,12 @@ struct lookup_table_struct { double xmin,ymin; double xmax,ymax; int prev_index; + bool sorted; + bool has_low_limit; + bool has_high_limit; + double low_limit; + double high_limit; }; @@ -84,6 +89,25 @@ void lookup_table_set_data( lookup_table_type * lt , double_vector_type * x , do } +void lookup_table_set_low_limit( lookup_table_type * lt , double limit ) { + lt->low_limit = limit; + lt->has_low_limit = true; +} + +bool lookup_table_has_low_limit(const lookup_table_type * lt ) { + return lt->has_low_limit; +} + +void lookup_table_set_high_limit( lookup_table_type * lt , double limit ) { + lt->high_limit = limit; + lt->has_high_limit = true; +} + +bool lookup_table_has_high_limit(const lookup_table_type * lt ) { + return lt->has_high_limit; +} + + lookup_table_type * lookup_table_alloc( double_vector_type * x , double_vector_type * y , bool data_owner) { lookup_table_type * lt = util_malloc( sizeof * lt); @@ -95,6 +119,8 @@ lookup_table_type * lookup_table_alloc( double_vector_type * x , double_vector_t } lookup_table_set_data( lt , x , y , false ); lt->data_owner = data_owner; + lt->has_low_limit = false; + lt->has_high_limit = false; return lt; } @@ -146,12 +172,22 @@ double lookup_table_interp( lookup_table_type * lt , double x) { return (( x - x1 ) * y2 + (x2 - x) * y1) / (x2 - x1 ); } } else { - util_abort("%s: out of bounds \n",__func__); - return -1; + if (x == lt->xmax) + return double_vector_get_last( lt->y_vector ); + else { + if (lt->has_low_limit && x < lt->xmin) + return lt->low_limit; + else if (lt->has_high_limit && x > lt->xmax) + return lt->high_limit; + else { + util_abort("%s: out of bounds \n",__func__); + return -1; + } + } } } } - + double lookup_table_get_max_value( lookup_table_type * lookup_table ) { diff --git a/ThirdParty/Ert/devel/libert_util/src/subst_list.c b/ThirdParty/Ert/devel/libert_util/src/subst_list.c index a563980a90..3aa0d3538d 100644 --- a/ThirdParty/Ert/devel/libert_util/src/subst_list.c +++ b/ThirdParty/Ert/devel/libert_util/src/subst_list.c @@ -819,7 +819,7 @@ const char * subst_list_iget_value( const subst_list_type * subst_list , int ind } } -const char * subst_list_get_value( subst_list_type * subst_list , const char * key) { +const char * subst_list_get_value( const subst_list_type * subst_list , const char * key) { const subst_list_string_type * node = hash_get( subst_list->map , key ); return node->value; } diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue.h index 64d78b372b..0c4e3ed66c 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue.h @@ -70,6 +70,8 @@ extern "C" { void job_queue_run_jobs(job_queue_type * queue, int num_total_run, bool verbose); void job_queue_run_jobs_threaded(job_queue_type * queue , int num_total_run, bool verbose); void * job_queue_run_jobs__(void * ); + void job_queue_start_manager_thread( job_queue_type * job_queue , pthread_t * queue_thread , int job_size , bool verbose); + job_status_type job_queue_iget_job_status(const job_queue_type * , int ); const char * job_queue_status_name( job_status_type status ); diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue_manager.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue_manager.h new file mode 100644 index 0000000000..fa77457df0 --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/job_queue_manager.h @@ -0,0 +1,41 @@ +/* + Copyright (C) 2011 Statoil ASA, Norway. + + The file 'job_queue.h' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#ifndef __JOB_QUEUE_MANAGER_H__ +#define __JOB_QUEUE_MANAGER_H__ +#ifdef __cplusplus +extern "C" { +#endif + +#include + +#include + +typedef struct job_queue_manager_struct job_queue_manager_type; + + job_queue_manager_type * job_queue_manager_alloc( job_queue_type * job_queue ); + void job_queue_manager_free( job_queue_manager_type * manager ); + void job_queue_manager_start_queue( job_queue_manager_type * manager , int num_total_run , bool verbose); + void job_queue_manager_wait( job_queue_manager_type * manager); + + UTIL_IS_INSTANCE_HEADER( job_queue_manager ); + +#ifdef __cplusplus +} +#endif +#endif diff --git a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h index ef56e5b609..77cb462357 100644 --- a/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h +++ b/ThirdParty/Ert/devel/libjob_queue/include/ert/job_queue/workflow_job.h @@ -43,8 +43,8 @@ extern "C" { char * workflow_job_get_executable( workflow_job_type * workflow_job); void workflow_job_set_internal_script( workflow_job_type * workflow_job , const char * script_path); - char* workflow_job_get_internal_script_path( workflow_job_type * workflow_job); - bool workflow_job_is_internal_script( workflow_job_type * workflow_job); + char* workflow_job_get_internal_script_path( const workflow_job_type * workflow_job); + bool workflow_job_is_internal_script( const workflow_job_type * workflow_job); void workflow_job_set_function( workflow_job_type * workflow_job , const char * function); char * workflow_job_get_function( workflow_job_type * workflow_job); diff --git a/ThirdParty/Ert/devel/libjob_queue/src/CMakeLists.txt b/ThirdParty/Ert/devel/libjob_queue/src/CMakeLists.txt index 164e078991..6db8d00d34 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libjob_queue/src/CMakeLists.txt @@ -1,7 +1,7 @@ #configure_file (${CMAKE_CURRENT_SOURCE_DIR}/CMake/include/libjob_queue_build_config.h.in ${CMAKE_CURRENT_BINARY_DIR}/libjob_queue_build_config.h) -set(source_files forward_model.c queue_driver.c job_queue.c local_driver.c rsh_driver.c torque_driver.c ext_job.c ext_joblist.c workflow_job.c workflow.c workflow_joblist.c) -set(header_files job_queue.h queue_driver.h local_driver.h rsh_driver.h torque_driver.h ext_job.h ext_joblist.h forward_model.h workflow_job.h workflow.h workflow_joblist.h) +set(source_files forward_model.c queue_driver.c job_queue.c local_driver.c rsh_driver.c torque_driver.c ext_job.c ext_joblist.c workflow_job.c workflow.c workflow_joblist.c job_queue_manager.c) +set(header_files job_queue.h queue_driver.h local_driver.h rsh_driver.h torque_driver.h ext_job.h ext_joblist.h forward_model.h workflow_job.h workflow.h workflow_joblist.h job_queue_manager.h) set_property(SOURCE rsh_driver.c PROPERTY COMPILE_FLAGS "-Wno-error") list( APPEND source_files lsf_driver.c) diff --git a/ThirdParty/Ert/devel/libjob_queue/src/job_queue.c b/ThirdParty/Ert/devel/libjob_queue/src/job_queue.c index 4c89999021..4b4b1f922f 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/job_queue.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/job_queue.c @@ -455,17 +455,19 @@ static void job_queue_node_free_error_info( job_queue_node_type * node ) { static void job_queue_node_fscanf_EXIT( job_queue_node_type * node ) { job_queue_node_free_error_info( node ); - if (util_file_exists( node->exit_file )) { - char * xml_buffer = util_fread_alloc_file_content( node->exit_file, NULL); - - node->failed_job = __alloc_tag_content( xml_buffer , "job" ); - node->error_reason = __alloc_tag_content( xml_buffer , "reason" ); - node->stderr_capture = __alloc_tag_content( xml_buffer , "stderr"); - node->stderr_file = __alloc_tag_content( xml_buffer , "stderr_file"); - - free( xml_buffer ); - } else - node->failed_job = util_alloc_sprintf("EXIT file:%s not found - load failure?" , node->exit_file); + if (node->exit_file) { + if (util_file_exists( node->exit_file )) { + char * xml_buffer = util_fread_alloc_file_content( node->exit_file, NULL); + + node->failed_job = __alloc_tag_content( xml_buffer , "job" ); + node->error_reason = __alloc_tag_content( xml_buffer , "reason" ); + node->stderr_capture = __alloc_tag_content( xml_buffer , "stderr"); + node->stderr_file = __alloc_tag_content( xml_buffer , "stderr_file"); + + free( xml_buffer ); + } else + node->failed_job = util_alloc_sprintf("EXIT file:%s not found - load failure?" , node->exit_file); + } } @@ -1519,6 +1521,18 @@ void * job_queue_run_jobs__(void * __arg_pack) { } +void job_queue_start_manager_thread( job_queue_type * job_queue , pthread_t * queue_thread , int job_size , bool verbose) { + + arg_pack_type * queue_args = arg_pack_alloc(); /* This arg_pack will be freed() in the job_que_run_jobs__() */ + arg_pack_append_ptr(queue_args , job_queue); + arg_pack_append_int(queue_args , job_size); + arg_pack_append_bool(queue_args , verbose); + job_queue_reset(job_queue); + pthread_create( queue_thread , NULL , job_queue_run_jobs__ , queue_args); +} + + + /** The most flexible use scenario is as follows: @@ -1537,17 +1551,12 @@ void * job_queue_run_jobs__(void * __arg_pack) { job_queue_run_jobs() function. */ + void job_queue_run_jobs_threaded(job_queue_type * queue , int num_total_run, bool verbose) { - arg_pack_type * arg_pack = arg_pack_alloc(); /* The arg_pack will be freed in the job_queue_run_jobs__() function. */ - arg_pack_append_ptr( arg_pack , queue ); - arg_pack_append_int( arg_pack , num_total_run ); - arg_pack_append_bool( arg_pack , verbose ); - { - pthread_t queue_thread; - pthread_create( &queue_thread , NULL , job_queue_run_jobs__ , arg_pack); - pthread_detach( queue_thread ); /* Signal that the thread resources should be cleaned up when - the thread has exited. */ - } + pthread_t queue_thread; + job_queue_start_manager_thread( queue , &queue_thread , num_total_run , verbose ); + pthread_detach( queue_thread ); /* Signal that the thread resources should be cleaned up when + the thread has exited. */ } diff --git a/ThirdParty/Ert/devel/libjob_queue/src/job_queue_manager.c b/ThirdParty/Ert/devel/libjob_queue/src/job_queue_manager.c new file mode 100644 index 0000000000..6c3db5940b --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/src/job_queue_manager.c @@ -0,0 +1,68 @@ +/* + Copyright (C) 2014 Statoil ASA, Norway. + + The file 'job_queue_manager.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. +*/ + +#define _GNU_SOURCE /* Must define this to get access to pthread_rwlock_t */ +#include +#include +#include +#include +#include +#include + +#include + +#include +#include + +#define JOB_QUEUE_MANAGER_TYPE_ID 81626006 + + + +struct job_queue_manager_struct { + UTIL_TYPE_ID_DECLARATION; + pthread_t queue_thread; + job_queue_type * job_queue; +}; + + +UTIL_IS_INSTANCE_FUNCTION( job_queue_manager , JOB_QUEUE_MANAGER_TYPE_ID ) + + +job_queue_manager_type * job_queue_manager_alloc( job_queue_type * job_queue ) { + job_queue_manager_type * manager = util_malloc( sizeof * manager ); + UTIL_TYPE_ID_INIT( manager , JOB_QUEUE_MANAGER_TYPE_ID ); + manager->job_queue = job_queue; + return manager; +} + + +void job_queue_manager_free( job_queue_manager_type * manager) { + free( manager ); +} + + +void job_queue_manager_start_queue( job_queue_manager_type * manager , int num_total_run , bool verbose) { + job_queue_start_manager_thread( manager->job_queue , &manager->queue_thread , num_total_run , verbose ); +} + + + +void job_queue_manager_wait( job_queue_manager_type * manager) { + pthread_join( manager->queue_thread , NULL ); +} + diff --git a/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c b/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c index 3e6c0bce9b..f582d48130 100644 --- a/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c +++ b/ThirdParty/Ert/devel/libjob_queue/src/workflow_job.c @@ -180,11 +180,11 @@ void workflow_job_set_internal_script( workflow_job_type * workflow_job , const workflow_job->internal_script_path = util_realloc_string_copy( workflow_job->internal_script_path , script_path ); } -char* workflow_job_get_internal_script_path( workflow_job_type * workflow_job) { +char* workflow_job_get_internal_script_path( const workflow_job_type * workflow_job) { return workflow_job->internal_script_path; } -bool workflow_job_is_internal_script( workflow_job_type * workflow_job) { +bool workflow_job_is_internal_script( const workflow_job_type * workflow_job) { return workflow_job->internal && workflow_job->internal_script_path != NULL; } diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt b/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt index 797e824333..e0cb9b046f 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt +++ b/ThirdParty/Ert/devel/libjob_queue/tests/CMakeLists.txt @@ -71,6 +71,10 @@ add_executable( job_torque_test job_torque_test.c ) target_link_libraries( job_torque_test job_queue util test_util ) add_test( job_torque_test ${EXECUTABLE_OUTPUT_PATH}/job_torque_test ) +add_executable( job_queue_manager job_queue_manager.c ) +target_link_libraries( job_queue_manager job_queue util test_util ) +add_test( job_queue_manager ${EXECUTABLE_OUTPUT_PATH}/job_queue_manager ) + add_executable( job_torque_submit_test job_torque_submit_test.c ) target_link_libraries( job_torque_submit_test job_queue util test_util ) file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/data/qsub_emulators/ DESTINATION ${EXECUTABLE_OUTPUT_PATH}) diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_lsf_submit_test.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_lsf_submit_test.c index 461a9171c2..f539aad745 100644 --- a/ThirdParty/Ert/devel/libjob_queue/tests/job_lsf_submit_test.c +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_lsf_submit_test.c @@ -27,26 +27,27 @@ void test_submit(lsf_driver_type * driver , const char * server , const char * bsub_cmd , const char * bjobs_cmd , const char * bkill_cmd , const char * cmd) { - lsf_driver_set_option(driver , LSF_SERVER , server ); + + test_assert_true( lsf_driver_set_option(driver , LSF_SERVER , server ) ); if (bsub_cmd != NULL) - lsf_driver_set_option(driver , LSF_BSUB_CMD , server ); + test_assert_true( lsf_driver_set_option(driver , LSF_BSUB_CMD , server )); if (bjobs_cmd != NULL) - lsf_driver_set_option(driver , LSF_BJOBS_CMD , server ); + test_assert_true( lsf_driver_set_option(driver , LSF_BJOBS_CMD , server ) ); if (bkill_cmd != NULL) - lsf_driver_set_option(driver , LSF_BKILL_CMD , server ); - + test_assert_true( lsf_driver_set_option(driver , LSF_BKILL_CMD , server )); + { char * run_path = util_alloc_cwd(); lsf_job_type * job = lsf_driver_submit_job( driver , cmd , 1 , run_path , "NAME" , 0 , NULL ); - if (job != NULL) { + if (job) { { int lsf_status = lsf_driver_get_job_status_lsf( driver , job ); - if (!((lsf_status == JOB_STAT_RUN) || (lsf_status == JOB_STAT_PEND))) - exit(1); + if (!((lsf_status == JOB_STAT_RUN) || (lsf_status == JOB_STAT_PEND))) + test_error_exit("Got lsf_status:%d expected: %d or %d \n",lsf_status , JOB_STAT_RUN , JOB_STAT_PEND); } lsf_driver_kill_job( driver , job ); @@ -56,10 +57,11 @@ void test_submit(lsf_driver_type * driver , const char * server , const char * b { int lsf_status = lsf_driver_get_job_status_lsf( driver , job ); if (lsf_status != JOB_STAT_EXIT) - exit(1); + test_error_exit("Got lsf_status:%d expected: %d \n",lsf_status , JOB_STAT_EXIT ); } - } else - exit(1); + } else + test_error_exit("lsf_driver_submit_job() returned NULL \n"); + free( run_path ); } diff --git a/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_manager.c b/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_manager.c new file mode 100644 index 0000000000..861b045bea --- /dev/null +++ b/ThirdParty/Ert/devel/libjob_queue/tests/job_queue_manager.c @@ -0,0 +1,48 @@ +/* + Copyright (C) 2012 Statoil ASA, Norway. + + The file 'job_queue_test.c' is part of ERT - Ensemble based Reservoir Tool. + + ERT is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + ERT is distributed in the hope that it will be useful, but WITHOUT ANY + WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. + + See the GNU General Public License at + for more details. + */ +#include +#include + +#include + +#include +#include + + + + +void test_create() { + job_queue_type * job_queue = job_queue_alloc( 100 , "OK" , "ERROR"); + job_queue_manager_type * manager = job_queue_manager_alloc( job_queue ); + + test_assert_true( job_queue_manager_is_instance( manager )); + + job_queue_manager_free( manager ); + job_queue_free( job_queue ); +} + + + + + + +int main( int argc , char ** argv) { + test_create(); + exit(0); +} + diff --git a/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py index c992b1bc04..62b0cacc38 100644 --- a/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py +++ b/ThirdParty/Ert/devel/python/python/ert/cwrap/basecclass.py @@ -44,19 +44,22 @@ def from_param(cls, c_class_object): @classmethod def createPythonObject(cls, c_pointer): - if not c_pointer == 0: + if c_pointer is not None: new_obj = cls.__new__(cls) BaseCClass.__init__(new_obj, c_pointer=c_pointer, parent=None, is_reference=False) return new_obj - return None + else: + return None @classmethod def createCReference(cls, c_pointer, parent=None): - if not c_pointer == 0: + if c_pointer is not None: new_obj = cls.__new__(cls) BaseCClass.__init__(new_obj, c_pointer=c_pointer, parent=parent, is_reference=True) return new_obj - return None + else: + return None + def convertToCReference(self, parent): self.__is_reference = True diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py b/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py index 4ae8117193..195390a922 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/__init__.py @@ -83,7 +83,7 @@ from .ecl_default import EclDefault from .ecl_rft_cell import EclPLTCell, EclRFTCell from .ecl_rft import EclRFT, EclRFTFile -from .fortio import FortIO +from .fortio import FortIO, openFortIO from .ecl_kw import EclKW from .ecl_file import EclFile from .ecl_grid import EclGrid diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py index 70744f1338..ee829e9613 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_kw.py @@ -730,6 +730,9 @@ def equal(self,other): else: raise TypeError("Can only compare with another EclKW") + def __eq__(self , other): + return self.equal( other ) + def equal_numeric(self , other , epsilon = 1e-6): """ diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py index 2ccb8a7238..a74d379b8d 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py @@ -816,8 +816,21 @@ def data_start(self): return CTime( EclSum.cNamespace().get_data_start( self ) ).datetime() + + @property + def end_time(self): + """ + The time of the last (loaded) time step. + """ + return CTime(EclSum.cNamespace().get_end_date( self )).datetime() + + @property def start_time(self): + return self.getStartTime() + + + def getStartTime(self): """ A Python datetime instance with the start time. @@ -825,13 +838,8 @@ def start_time(self): """ return CTime( EclSum.cNamespace().get_start_date( self ) ).datetime() - @property - def end_time(self): - """ - The time of the last (loaded) time step. - """ - return CTime(EclSum.cNamespace().get_end_date( self )).datetime() - + + @property def last_report(self): """ @@ -916,7 +924,8 @@ def free(self): @classmethod def createCReference(cls, c_pointer, parent=None): result = super(EclSum, cls).createCReference(c_pointer, parent) - result._initialize() + if not result is None: + result._initialize() return result @classmethod diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py b/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py index b7bd988b38..1d6a12265b 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/fortio.py @@ -107,6 +107,24 @@ def free(self): self.close() +class FortIOContextManager(object): + + def __init__(self , fortio): + self.__fortio = fortio + + def __enter__(self): + return self.__fortio + + def __exit__(self, exc_type, exc_val, exc_tb): + self.__fortio.close() + return False + + +def openFortIO( file_name , mode = FortIO.READ_MODE , fmt_file = False , endian_flip_header = True): + return FortIOContextManager( FortIO( file_name , mode = mode , fmt_file = fmt_file , endian_flip_header = endian_flip_header )) + + + cwrapper = CWrapper(ECL_LIB) cwrapper.registerObjectType("fortio", FortIO) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt index d8c21ba399..4d14ad4a38 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/CMakeLists.txt @@ -15,7 +15,6 @@ set(PYTHON_SOURCES ert_template.py ert_templates.py ert_workflow_list.py - gen_data.py local_config.py local_obsdata.py local_obsdata_node.py @@ -27,6 +26,8 @@ set(PYTHON_SOURCES post_simulation_hook.py site_config.py state_map.py + run_arg.py + ert_run_context.py ) add_python_package("python.ert.enkf" ${PYTHON_INSTALL_PREFIX}/ert/enkf "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py index 5577ad7874..2481b1fe88 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/__init__.py @@ -23,7 +23,6 @@ from .node_id import NodeId -from .gen_data import GenData from .enkf_linalg import EnkfLinalg from .util import TimeMap from .state_map import StateMap @@ -57,9 +56,10 @@ from .enkf_simulation_runner import EnkfSimulationRunner from .enkf_fs_manager import EnkfFsManager - +from .run_arg import RunArg +from .ert_run_context import ErtRunContext from .enkf_main import EnKFMain from .ert_log import ErtLog -from ert.job_queue import ErtScript as ErtScript \ No newline at end of file +from ert.job_queue import ErtScript as ErtScript diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt index 2be976e287..502785d8a3 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/CMakeLists.txt @@ -3,6 +3,7 @@ set(PYTHON_SOURCES enkf_config_node.py enkf_node.py gen_kw.py + gen_data.py field.py field_config.py gen_data_config.py diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py index 32882e45c9..9857287a53 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/__init__.py @@ -5,8 +5,9 @@ from .field import Field from .enkf_config_node import EnkfConfigNode -from .enkf_node import EnkfNode from .gen_kw import GenKw +from .gen_data import GenData +from .enkf_node import EnkfNode __all__ = ["GenDataConfig", "GenKwConfig", @@ -15,4 +16,5 @@ "Field", "EnkfConfigNode", "EnkfNode", - "GenKw"] + "GenKw", + "GenData"] diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py index 267d1aee89..8e60c09a1a 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/enkf_node.py @@ -14,8 +14,8 @@ # See the GNU General Public License at # for more details. from ert.cwrap import BaseCClass, CWrapper -from ert.enkf import ENKF_LIB, EnkfFs, NodeId, GenData -from ert.enkf.data import EnkfConfigNode +from ert.enkf import ENKF_LIB, EnkfFs, NodeId +from ert.enkf.data import EnkfConfigNode , GenKw , GenData from ert.enkf.data.gen_data_config import GenDataConfig from ert.enkf.enums import EnkfStateType from ert.enkf.enums.ert_impl_type_enum import ErtImplType @@ -50,6 +50,14 @@ def asGenData(self): return GenData.createCReference(self.valuePointer(), self) + def asGenKw(self): + impl_type = EnkfNode.cNamespace().get_impl_type(self) + assert impl_type == ErtImplType.GEN_KW + + return GenKw.createCReference(self.valuePointer(), self) + + + # def vector_storage(self): # return EnkfNode.cNamespace().vector_storage(self) @@ -70,6 +78,9 @@ def tryLoad(self, fs, node_id): return EnkfNode.cNamespace().try_load(self, fs, node_id) + def save(self , fs , node_id ): + EnkfNode.cNamespace().store(self , fs , True , node_id) + def free(self): EnkfNode.cNamespace().free(self) @@ -89,6 +100,6 @@ def free(self): EnkfNode.cNamespace().try_load = cwrapper.prototype("bool enkf_node_try_load(enkf_node, enkf_fs, node_id)") EnkfNode.cNamespace().get_impl_type = cwrapper.prototype("ert_impl_type_enum enkf_node_get_impl_type(enkf_node)") - +EnkfNode.cNamespace().store = cwrapper.prototype("void enkf_node_store(enkf_node, enkf_fs , bool , node_id)") #todo fix this # EnkfNode.cNamespace().get_config = cwrapper.prototype("c_void_p enkf_node_get_config(enkf_node)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data.py similarity index 69% rename from ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py rename to ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data.py index a428071cca..dd48f00ff1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/gen_data.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_data.py @@ -1,5 +1,5 @@ from ert.cwrap import BaseCClass, CWrapper -from ert.ecl import FortIO +from ert.util import DoubleVector from ert.enkf import ENKF_LIB @@ -24,6 +24,12 @@ def export(self, file_name, file_format_type, fortio): @type: FortIO """ GenData.cNamespace().export(self, file_name, file_format_type, fortio) + + def getData(self): + data = DoubleVector() + GenData.cNamespace().export_data( self , data ) + return data + cwrapper = CWrapper(ENKF_LIB) @@ -33,7 +39,7 @@ def export(self, file_name, file_format_type, fortio): GenData.cNamespace().free = cwrapper.prototype("void gen_data_free(gen_data)") GenData.cNamespace().size = cwrapper.prototype("int gen_data_get_size(gen_data)") -GenData.cNamespace().export = cwrapper.prototype("void gen_data_export(gen_data , char*, gen_data_file_format_type, fortio)") - +GenData.cNamespace().export = cwrapper.prototype("void gen_data_export(gen_data , char*, gen_data_file_format_type, fortio)") +GenData.cNamespace().export_data = cwrapper.prototype("void gen_data_export_data(gen_data , double_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py index c6e59c8f32..024e9c6e7a 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw.py @@ -13,7 +13,12 @@ # # See the GNU General Public License at # for more details. +import os.path + from ert.cwrap import BaseCClass, CWrapper, CFILE + +from ert.util import DoubleVector + from ert.enkf import ENKF_LIB from ert.enkf.data import GenKwConfig @@ -73,6 +78,35 @@ def __setitem__(self, key, value): raise TypeError("Illegal type for indexing, must be int or str, got: %s" % (key)) + def eclWrite(self , path , filename , export_file = None): + if not path is None: + if not os.path.isdir(path): + raise IOError("The directory:%s does not exist" % path) + + + if export_file: + with open(export_file , "w") as fileH: + GenKw.cNamespace().ecl_write(self , path , filename , CFILE( fileH )) + else: + GenKw.cNamespace().ecl_write(self , path , filename , None ) + + + + def setValues(self , values): + if len(values) == len(self): + if isinstance(values , DoubleVector): + GenKw.cNamespace().set_values( self , d ) + else: + d = DoubleVector() + for (index,v) in enumerate(values): + if isinstance(v, (int,long,float)): + d[index] = v + else: + raise TypeError("Values must numeric: %s is invalid" % v) + GenKw.cNamespace().set_values( self , d ) + else: + raise ValueError("Size mismatch between GenKW and values") + def __len__(self): """ @rtype: int """ return GenKw.cNamespace().size(self) @@ -96,7 +130,9 @@ def free(self): GenKw.cNamespace().export_template = cwrapper.prototype("void gen_kw_ecl_write_template(gen_kw , char* )") GenKw.cNamespace().data_iget = cwrapper.prototype("double gen_kw_data_iget(gen_kw, int, bool)") GenKw.cNamespace().data_iset = cwrapper.prototype("void gen_kw_data_iset(gen_kw, int, double)") +GenKw.cNamespace().set_values = cwrapper.prototype("void gen_kw_data_set_vector(gen_kw, double_vector)") GenKw.cNamespace().data_get = cwrapper.prototype("double gen_kw_data_get(gen_kw, char*, bool)") GenKw.cNamespace().data_set = cwrapper.prototype("void gen_kw_data_set(gen_kw, char*, double)") GenKw.cNamespace().size = cwrapper.prototype("int gen_kw_data_size(gen_kw)") -GenKw.cNamespace().has_key = cwrapper.prototype("bool gen_kw_data_has_key(gen_kw, char*)") \ No newline at end of file +GenKw.cNamespace().has_key = cwrapper.prototype("bool gen_kw_data_has_key(gen_kw, char*)") +GenKw.cNamespace().ecl_write = cwrapper.prototype("void gen_kw_ecl_write(gen_kw, char* , char* , FILE)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py index 1a963bdce5..74d66b485e 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/data/gen_kw_config.py @@ -19,7 +19,7 @@ class GenKwConfig(BaseCClass): - def __init__(self, key, tag_fmt, parameter_file=None): + def __init__(self, key, template_file , parameter_file , tag_fmt = "<%s>"): """ @type key: str @type tag_fmt: str @@ -27,8 +27,12 @@ def __init__(self, key, tag_fmt, parameter_file=None): c_ptr = GenKwConfig.cNamespace().alloc_empty(key, tag_fmt) super(GenKwConfig, self).__init__(c_ptr) - if parameter_file is not None: - self.setParameterFile(parameter_file) + self.setTemplateFile(template_file) + self.setParameterFile(parameter_file) + + + def setTemplateFile(self, template_file): + GenKwConfig.cNamespace().set_template_file(self , template_file) def getTemplateFile(self): return GenKwConfig.cNamespace().get_template_file(self) @@ -60,6 +64,7 @@ def free(self): GenKwConfig.cNamespace().free = cwrapper.prototype("void gen_kw_config_free( gen_kw_config )") GenKwConfig.cNamespace().alloc_empty = cwrapper.prototype("c_void_p gen_kw_config_alloc_empty( char*, char* )") GenKwConfig.cNamespace().get_template_file = cwrapper.prototype("char* gen_kw_config_get_template_file(gen_kw_config)") +GenKwConfig.cNamespace().set_template_file = cwrapper.prototype("void gen_kw_config_set_template_file(gen_kw_config , char*)") GenKwConfig.cNamespace().get_parameter_file = cwrapper.prototype("char* gen_kw_config_get_parameter_file(gen_kw_config)") GenKwConfig.cNamespace().set_parameter_file = cwrapper.prototype("void gen_kw_config_set_parameter_file( gen_kw_config, char* )") GenKwConfig.cNamespace().alloc_name_list = cwrapper.prototype("stringlist_obj gen_kw_config_alloc_name_list(gen_kw_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py index 08b1ea39c1..5f0355a762 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ecl_config.py @@ -103,10 +103,13 @@ def loadRefcase(self, refcase): def getRefcase(self): """ @rtype: EclSum """ - refcase = EclConfig.cNamespace().get_refcase(self) - refcase.setParent(self) + refcase = EclConfig.cNamespace().get_refcase( self ) + if not refcase is None: + refcase.setParent(self) + return refcase + def validateRefcase(self, refcase): return EclConfig.cNamespace().validate_refcase( self , refcase ) @@ -167,7 +170,7 @@ def getPressureUnit(self): EclConfig.cNamespace().validate_init_section = cwrapper.prototype("ui_return_obj ecl_config_validate_init_section(ecl_config, char*)") EclConfig.cNamespace().get_refcase_name = cwrapper.prototype("char* ecl_config_get_refcase_name(ecl_config)") -EclConfig.cNamespace().get_refcase = cwrapper.prototype("ecl_sum_ref ecl_config_get_refcase(ecl_config)") +EclConfig.cNamespace().get_refcase = cwrapper.prototype("ecl_sum_ref ecl_config_get_refcase(ecl_config)") #todo: fix return type!!! EclConfig.cNamespace().load_refcase = cwrapper.prototype("void ecl_config_load_refcase(ecl_config, char*)") EclConfig.cNamespace().validate_refcase = cwrapper.prototype("ui_return_obj ecl_config_validate_refcase(ecl_config, char*)") EclConfig.cNamespace().has_refcase = cwrapper.prototype("bool ecl_config_has_refcase(ecl_config)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py index 6d69928062..959d0da54e 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_fs.py @@ -29,7 +29,8 @@ def __init__(self, mount_point): @classmethod def createCReference(cls, c_pointer, parent=None): obj = super(EnkfFs, cls).createCReference(c_pointer, parent) - obj.__umounted = False + if not obj is None: + obj.__umounted = False return obj @@ -79,10 +80,11 @@ def exists(cls, path): return cls.cNamespace().exists(path) @classmethod - def createFileSystem(cls, path, fs_type, arg=None): + def createFileSystem(cls, path, fs_type, arg=None , mount = False): assert isinstance(path, str) assert isinstance(fs_type, EnKFFSType) - cls.cNamespace().create(path, fs_type, arg) + fs = cls.cNamespace().create(path, fs_type, arg, mount) + return fs def __checkIfUmounted(self): @@ -99,12 +101,10 @@ def free(self): cwrapper = CWrapper(ENKF_LIB) -cwrapper.registerType("enkf_fs", EnkfFs) -cwrapper.registerType("enkf_fs_obj", EnkfFs.createPythonObject) -cwrapper.registerType("enkf_fs_ref", EnkfFs.createCReference) +cwrapper.registerObjectType("enkf_fs", EnkfFs) EnkfFs.cNamespace().mount = cwrapper.prototype("c_void_p enkf_fs_mount(char* )") -EnkfFs.cNamespace().create = cwrapper.prototype("void enkf_fs_create_fs(char* , enkf_fs_type_enum , c_void_p)") +EnkfFs.cNamespace().create = cwrapper.prototype("enkf_fs_ref enkf_fs_create_fs(char* , enkf_fs_type_enum , c_void_p , bool)") EnkfFs.cNamespace().decref = cwrapper.prototype("int enkf_fs_decref(enkf_fs)") EnkfFs.cNamespace().get_refcount = cwrapper.prototype("int enkf_fs_get_refcount(enkf_fs)") EnkfFs.cNamespace().has_node = cwrapper.prototype("bool enkf_fs_has_node(enkf_fs, char*, c_uint, int, int, c_uint)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py index 81cce4598e..8ee6403df8 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_main.py @@ -16,6 +16,7 @@ from ert.cwrap import BaseCClass, CWrapper from ert.enkf import AnalysisConfig, EclConfig, EnkfObs, EnKFState, LocalConfig, ModelConfig, EnsConfig, PlotConfig, SiteConfig, ENKF_LIB, EnkfSimulationRunner, EnkfFsManager, ErtWorkflowList, PostSimulationHook +from ert.enkf.enums import EnkfInitModeEnum from ert.util import SubstitutionList, Log @@ -40,6 +41,14 @@ def createCReference(cls, c_pointer, parent=None): def createNewConfig(config_file, storage_path, case_name, dbase_type, num_realizations): EnKFMain.cNamespace().create_new_config(config_file, storage_path, case_name, dbase_type, num_realizations) + def getRealisation(self , iens): + """ @rtype: EnKFState """ + if 0 <= iens < len(self): + return EnKFMain.cNamespace().iget_state(self, iens).setParent(self) + else: + raise IndexError("iens value:%d invalid Valid range: [0,%d)" % (iens , len(self))) + + def set_eclbase(self, eclbase): EnKFMain.cNamespace().set_eclbase(self, eclbase) @@ -202,6 +211,15 @@ def exportField(self, keyword, path, iactive, file_type, report_step, state, enk def loadFromForwardModel(self, realization, iteration, fs): EnKFMain.cNamespace().load_from_forward_model(self, iteration, realization, fs) + + def submitSimulation(self , run_arg): + EnKFMain.cNamespace().submit_simulation( self , run_arg) + + + def getRunContextENSEMPLE_EXPERIMENT(self , fs , iactive , init_mode = EnkfInitModeEnum.INIT_CONDITIONAL , iteration = 0): + return EnKFMain.cNamespace().alloc_run_context_ENSEMBLE_EXPERIMENT( self , fs , iactive , init_mode , iteration ) + + ################################################################## @@ -263,3 +281,5 @@ def loadFromForwardModel(self, realization, iteration, fs): EnKFMain.cNamespace().export_field_with_fs = cwrapper.prototype("bool enkf_main_export_field_with_fs(enkf_main, char*, char*, bool_vector, enkf_field_file_format_enum, int, enkf_state_type_enum, enkf_fs_manager)") EnKFMain.cNamespace().load_from_forward_model = cwrapper.prototype("void enkf_main_load_from_forward_model_from_gui(enkf_main, int, bool_vector, enkf_fs)") +EnKFMain.cNamespace().submit_simulation = cwrapper.prototype("void enkf_main_isubmit_job(enkf_main , run_arg)") +EnKFMain.cNamespace().alloc_run_context_ENSEMBLE_EXPERIMENT= cwrapper.prototype("ert_run_context_obj enkf_main_alloc_ert_run_context_ENSEMBLE_EXPERIMENT( enkf_main , enkf_fs , bool_vector , enkf_init_mode_enum , int)") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_state.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_state.py index 0e01ef0aad..d79458e046 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_state.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enkf_state.py @@ -21,34 +21,43 @@ class EnKFState(BaseCClass): def __init__(self): raise NotImplementedError("Class can not be instantiated directly!") + + + def __getitem__(self , kw): + if isinstance(kw , str): + if kw in self: + node = EnKFState.cNamespace().get_node( self , kw ) + node.setParent( self ) + return node + else: + raise KeyError("The state object does not have node:%s" % kw) + else: + raise TypeError("The kw type must be string. Input:%s" % kw) - def kill_simulation(self): - EnKFState.cNamespace().kill_simulation(self) - def resubmit_simulation(self, sim_number): - EnKFState.cNamespace().resubmit_simulation(self, sim_number) + def __contains__(self , kw): + return EnKFState.cNamespace().has_key( self , kw ) - def getRunStatus(self): - """ @rtype: JobStatusType """ - return EnKFState.cNamespace().get_run_status(self) - def get_start_time(self): - return EnKFState.cNamespace().get_start_time(self) + def hasKey(self , kw): + return kw in self + + + def getNode(self , kw): + return self[kw] - def get_submit_time(self): - return EnKFState.cNamespace().get_submit_time(self) def free(self): EnKFState.cNamespace().free(self) + + cwrapper = CWrapper(ENKF_LIB) cwrapper.registerType("enkf_state", EnKFState) cwrapper.registerType("enkf_state_obj", EnKFState.createPythonObject) cwrapper.registerType("enkf_state_ref", EnKFState.createCReference) -EnKFState.cNamespace().free = cwrapper.prototype("void enkf_state_free( enkf_state )") -EnKFState.cNamespace().kill_simulation = cwrapper.prototype("void enkf_state_kill_simulation(enkf_state)") -EnKFState.cNamespace().resubmit_simulation = cwrapper.prototype("void enkf_state_resubmit_simulation(enkf_state, int)") -EnKFState.cNamespace().get_run_status = cwrapper.prototype("job_status_type_enum enkf_state_get_run_status(enkf_state)") -EnKFState.cNamespace().get_start_time = cwrapper.prototype("int enkf_state_get_start_time(enkf_state)") -EnKFState.cNamespace().get_submit_time = cwrapper.prototype("int enkf_state_get_submit_time(enkf_state)") + +EnKFState.cNamespace().free = cwrapper.prototype("void enkf_state_free( enkf_state )") +EnKFState.cNamespace().has_key = cwrapper.prototype("bool enkf_state_has_node( enkf_state , char* )") +EnKFState.cNamespace().get_node = cwrapper.prototype("enkf_node_ref enkf_state_get_node( enkf_state , char* )") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py index 381706348d..71e1cba411 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/__init__.py @@ -2,7 +2,7 @@ from .load_fail_type_enum import LoadFailTypeEnum from .enkf_var_type_enum import EnkfVarType from .enkf_state_type_enum import EnkfStateType -from .enkf_run_enum import EnkfRunEnum +from .enkf_run_enum import EnkfRunType from .enkf_obs_impl_type_enum import EnkfObservationImplementationType from .ert_impl_type_enum import ErtImplType from .enkf_init_modes_enum import EnkfInitModeEnum @@ -15,11 +15,11 @@ "LoadFailTypeEnum", "EnkfVarType", "EnkfStateType", - "EnkfRunEnum", + "EnkfRunType", "EnkfObservationImplementationType", "ErtImplType", "EnkfInitModeEnum", "RealizationStateEnum", "EnkfTruncationType", "EnKFFSType", - "GenDataFileType"] \ No newline at end of file + "GenDataFileType"] diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_run_enum.py b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_run_enum.py index 264f4c4389..dae862c4d9 100644 --- a/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_run_enum.py +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/enums/enkf_run_enum.py @@ -17,13 +17,17 @@ from ert.enkf import ENKF_LIB -class EnkfRunEnum(BaseCEnum): +class EnkfRunType(BaseCEnum): ENKF_ASSIMILATION = None ENSEMBLE_EXPERIMENT = None + SMOOTHER_UPDATED = None + INIT_ONLY = None + +EnkfRunType.addEnum("ENKF_ASSIMILATION" , 1) +EnkfRunType.addEnum("ENSEMBLE_EXPERIMENT" , 2) +EnkfRunType.addEnum("SMOOTHER_UPDATE" , 4) +EnkfRunType.addEnum("INIT_ONLY" , 8) -EnkfRunEnum.populateEnum(ENKF_LIB, "enkf_run_enum_iget") -EnkfRunEnum.registerEnum(ENKF_LIB, "enkf_run_enum") - - +EnkfRunType.registerEnum( ENKF_LIB , "enkf_run_mode_enum") diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/ert_run_context.py b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_run_context.py new file mode 100644 index 0000000000..6c76c64e9d --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/ert_run_context.py @@ -0,0 +1,71 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'enkf_fs.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB, TimeMap, StateMap, RunArg +from ert.enkf.enums import EnKFFSType + +class ErtRunContext(BaseCClass): + + def __init__(self): + raise NotImplementedError("Class can not be instantiated directly!") + + def __len__(self): + return ErtRunContext.cNamespace().get_size( self ) + + + def __getitem__(self , index): + if isinstance(index, int): + if 0 <= index < len(self): + run_arg = ErtRunContext.cNamespace().iget(self , index) + run_arg.setParent( self ) + return run_arg + else: + raise IndexError("Index:%d invalid. Legal range: [0,%d)" % (index , len(self))) + else: + raise TypeError("Invalid type - expetected integer") + + def __eq__(self , other): + if self.c_ptr == other.c_ptr: + return True + else: + raise Exception("__eq__ not properly implemented") + + + def iensGet(self , iens): + c_ptr = ErtRunContext.cNamespace().iens_get(self , iens) + if c_ptr: + run_arg = RunArg( c_ptr , parent = self , is_reference = True ) + return run_arg + else: + raise ValueError("Run context does not have run argument for iens:%d" % iens) + + + def free(self): + ErtRunContext.cNamespace().free( self ) + + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("ert_run_context", ErtRunContext) + +ErtRunContext.cNamespace().get_size = cwrapper.prototype("int ert_run_context_get_size( ert_run_context )") +ErtRunContext.cNamespace().free = cwrapper.prototype("void ert_run_context_free( ert_run_context )") +ErtRunContext.cNamespace().iget = cwrapper.prototype("run_arg_ref ert_run_context_iget_arg( ert_run_context , int)") +ErtRunContext.cNamespace().iens_get = cwrapper.prototype("c_void_p ert_run_context_iens_get_arg( ert_run_context , int)") + + diff --git a/ThirdParty/Ert/devel/python/python/ert/enkf/run_arg.py b/ThirdParty/Ert/devel/python/python/ert/enkf/run_arg.py new file mode 100644 index 0000000000..0ad602d285 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/enkf/run_arg.py @@ -0,0 +1,47 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'run_arg.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + + +from ert.cwrap import BaseCClass, CWrapper +from ert.enkf import ENKF_LIB, TimeMap, StateMap +from ert.enkf.enums import EnkfRunType, EnkfStateType + + + +class RunArg(BaseCClass): + def __init__(self , c_ptr , parent = None , is_reference = False ): + super(RunArg , self).__init__( c_ptr , parent = None , is_reference = is_reference ) + + + @classmethod + def ENSEMBLE_EXPERIMENT(cls , fs , iens , runpath , iter = 0): + c_ptr = RunArg.cNamespace().alloc_ENSEMBLE_EXPERIMENT(fs , iens , iter , runpath) + return RunArg( c_ptr ) + + + def free(self): + RunArg.cNamespace().free(self) + + + + + +cwrapper = CWrapper(ENKF_LIB) +cwrapper.registerObjectType("run_arg", RunArg) + + +RunArg.cNamespace().alloc_ENSEMBLE_EXPERIMENT = cwrapper.prototype("c_void_p run_arg_alloc_ENSEMBLE_EXPERIMENT(enkf_fs , int, int, char*)") +RunArg.cNamespace().free = cwrapper.prototype("void run_arg_free(run_arg)") diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt index 0a46bdafeb..a828f1c0ed 100644 --- a/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/CMakeLists.txt @@ -10,6 +10,7 @@ set(PYTHON_SOURCES job.py job_status_type_enum.py queue.py + job_queue_manager.py workflow.py workflow_job.py workflow_joblist.py diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py index cff0c2d0bc..7b902d0df7 100644 --- a/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/__init__.py @@ -76,6 +76,7 @@ def setenv( var, value): from .job_status_type_enum import JobStatusType from .job import Job from .queue import JobList, JobQueue, statusList, exList, runtimeList +from .job_queue_manager import JobQueueManager from .driver import QueueDriverEnum, Driver, LSFDriver, RSHDriver, LocalDriver from .ext_job import ExtJob from .ext_joblist import ExtJoblist diff --git a/ThirdParty/Ert/devel/python/python/ert/job_queue/job_queue_manager.py b/ThirdParty/Ert/devel/python/python/ert/job_queue/job_queue_manager.py new file mode 100644 index 0000000000..4b0c2472b6 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/job_queue/job_queue_manager.py @@ -0,0 +1,50 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'job_queue_manager.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +""" +Module implementing a queue for managing external jobs. + +""" +import ctypes +from types import StringType, IntType +import time +from ert.cwrap import BaseCClass, CWrapper + +from ert.job_queue import JOB_QUEUE_LIB, Job, JobStatusType + + + +class JobQueueManager(BaseCClass): + + def __init__(self, queue): + c_ptr = JobQueueManager.cNamespace().alloc(queue) + super(JobQueueManager, self).__init__(c_ptr) + + + def startQueue(self , total_size , verbose = False): + JobQueueManager.cNamespace().start_queue( self , total_size , verbose ) + + def free(self): + JobQueueManager.cNamespace().free(self) + + +################################################################# + +cwrapper = CWrapper(JOB_QUEUE_LIB) +cwrapper.registerObjectType("job_queue_manager", JobQueueManager) + +JobQueueManager.cNamespace().alloc = cwrapper.prototype("c_void_p job_queue_manager_alloc( job_queue) ") +JobQueueManager.cNamespace().free = cwrapper.prototype("void job_queue_manager_free( job_queue_manager )") +JobQueueManager.cNamespace().start_queue = cwrapper.prototype("void job_queue_manager_start_queue( job_queue_manager , int , bool)") diff --git a/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt b/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt index da5f21f1c2..08c692f2c3 100644 --- a/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/python/ert/server/CMakeLists.txt @@ -2,6 +2,7 @@ set(PYTHON_SOURCES __init__.py ert_server.py ert_socket.py + run_context.py ) add_python_package("python.ert.server" ${PYTHON_INSTALL_PREFIX}/ert/server "${PYTHON_SOURCES}" True) diff --git a/ThirdParty/Ert/devel/python/python/ert/server/__init__.py b/ThirdParty/Ert/devel/python/python/ert/server/__init__.py index 58c29cce39..446c848fea 100644 --- a/ThirdParty/Ert/devel/python/python/ert/server/__init__.py +++ b/ThirdParty/Ert/devel/python/python/ert/server/__init__.py @@ -1,3 +1,4 @@ -from .ert_server import ErtServer +from .ert_server import ErtServer, ErtCmdError from .ert_socket import ErtSocket +from .run_context import RunContext diff --git a/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py b/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py index 897c374486..2387aa0e29 100644 --- a/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py +++ b/ThirdParty/Ert/devel/python/python/ert/server/ert_server.py @@ -19,7 +19,16 @@ import json import os -from ert.enkf import EnKFMain +from ert.enkf import EnKFMain,RunArg +from ert.enkf.enums import EnkfRunType , EnkfStateType +from ert.enkf import NodeId + +from .run_context import RunContext + +class ErtCmdError(Exception): + pass + + class ErtServer(object): site_config = None @@ -31,6 +40,17 @@ def __init__(self , config_file = None): self.open( config_file ) else: raise IOError("The config file:%s does not exist" % config_file) + self.initCmdTable() + self.run_context = None + + + + def initCmdTable(self): + self.cmd_table = {"STATUS" : self.handleSTATUS , + "INIT_SIMULATIONS" : self.handleINIT_SIMULATIONS , + "ADD_SIMULATION" : self.handleADD_SIMULATION , + "SET_VARIABLE" : self.handleSET_VARIABLE , + "GET_RESULT" : self.handleGET_RESULT } def open(self , config_file): @@ -59,8 +79,80 @@ def __del__(self): def evalCmd(self , cmd_expr): cmd = cmd_expr[0] - if cmd == "STATUS": - if self.isConnected(): - return ["OPEN"] + func = self.cmd_table.get(cmd) + + if func: + return func(cmd_expr[1:]) + else: + raise ErtCmdError("The command:%s was not recognized" % cmd) + + + def handleSTATUS(self , args): + if self.isConnected(): + if self.run_context is None: + return ["READY"] else: - return ["CLOSED"] + return ["RUNNING" , self.run_context.getNumRunning() , self.run_context.getNumComplete()] + else: + return ["CLOSED"] + + + def handleINIT_SIMULATIONS(self , args): + if len(args) == 2: + if self.run_context is None: + run_size = args[0] + init_case = args[1] + self.run_context = RunContext(self.ert_handle , run_size , init_case) + return self.handleSTATUS([]) + else: + raise ErtCmdError("The ert server has already started simulations") + else: + raise ErtCmdError("The INIT_SIMULATIONS command expects two arguments: [ensemble_size , init_case]") + + + def handleGET_RESULT(self , args): + iens = args[0] + report_step = args[1] + kw = str(args[2]) + ensembleConfig = self.ert_handle.ensembleConfig() + if ensembleConfig.hasKey( kw ): + state = self.ert_handle[iens] + node = state[kw] + gen_data = node.asGenData() + + fs = self.ert_handle.getEnkfFsManager().getCurrentFileSystem() + node_id = NodeId(report_step , iens , EnkfStateType.FORECAST ) + if node.tryLoad( fs , node_id ): + data = gen_data.getData() + return json.dumps( ["OK"] + data.asList() ) + else: + raise ErtCmdError("Loading iens:%d report:%d kw:%s failed" % (iens , report_step , kw)) + else: + raise ErtCmdError("The keyword:%s is not recognized" % kw) + + + + + def handleSET_VARIABLE(self , args): + geo_id = args[0] + pert_id = args[1] + iens = args[2] + kw = str(args[3]) + ensembleConfig = self.ert_handle.ensembleConfig() + if ensembleConfig.hasKey(kw): + state = self.ert_handle[iens] + node = state[kw] + gen_kw = node.asGenKw() + gen_kw.setValues(args[4:]) + + fs = self.ert_handle.getEnkfFsManager().getCurrentFileSystem() + node_id = NodeId(0 , iens , EnkfStateType.ANALYZED ) + node.save( fs , node_id ) + else: + raise ErtCmdError("The keyword:%s is not recognized" % kw) + + + + def handleADD_SIMULATION(self , args): + iens = args[0] + self.run_context.startSimulation( iens ) diff --git a/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py b/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py index 1f4e4c8a07..a8014f9e29 100644 --- a/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py +++ b/ThirdParty/Ert/devel/python/python/ert/server/ert_socket.py @@ -19,6 +19,7 @@ import sys import threading import json +import traceback from ert.server import ErtServer @@ -36,7 +37,7 @@ def handle(self): else: self.evalJson( json_data ) except Exception,e: - self.handleInvalidJSON(data , e) + self.handleInvalidJSON(data , "%s %s" % (e , traceback.format_exc())) diff --git a/ThirdParty/Ert/devel/python/python/ert/server/run_context.py b/ThirdParty/Ert/devel/python/python/ert/server/run_context.py new file mode 100644 index 0000000000..1356a2b819 --- /dev/null +++ b/ThirdParty/Ert/devel/python/python/ert/server/run_context.py @@ -0,0 +1,47 @@ +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'run_context.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +from ert.job_queue import JobQueueManager +from ert.enkf import RunArg + +class RunContext(object): + def __init__(self , ert_handle , size , init_case): + self.ert_handle = ert_handle + self.size = size + self.init_case = init_case + self.runner = ert_handle.getEnkfSimulationRunner() + + site_config = self.ert_handle.siteConfig() + self.queue_manager = JobQueueManager( site_config.getJobQueue() ) + self.queue_manager.startQueue( size , verbose = True ) + + fs = self.ert_handle.getEnkfFsManager().getCurrentFileSystem() + mask = BoolVector( default_value = True ) + mask[size - 1] = True + self.ert_run_context = self.ert_handle.getRunContextENSEMPLE_EXPERIMENT( fs , mask ) + + + def getNumRunning(self): + return 0 + + + def getNumComplete(self): + return 0 + + + def startSimulation(self , iens): + self.ert_handle.submitSimulation( self.ert_run_context.get(iens) ) + diff --git a/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py index c4c93d8f3c..3a80fe4866 100644 --- a/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py +++ b/ThirdParty/Ert/devel/python/python/ert/test/ert_test_runner.py @@ -9,28 +9,30 @@ class ErtTestRunner(object): @staticmethod - def findTestsInDirectory(path, recursive=True): - loader = TestLoader() - tests = loader.discover(path) + def runTestSuite(tests , test_verbosity = 3): + test_runner = TextTestRunner(verbosity=test_verbosity) + result = test_runner.run(tests) + return result.wasSuccessful() + + + @staticmethod + def findTestsInDirectory(path, recursive=True , pattern = "test*.py"): + loader = TestLoader() + test_suite = loader.discover(path , pattern = pattern) + for (root, dirnames, filenames) in os.walk( path ): for directory in dirnames: - tests.addTests(ErtTestRunner.findTestsInDirectory(os.path.join(root, directory), recursive)) + test_suite.addTests(ErtTestRunner.findTestsInDirectory(os.path.join(root, directory), recursive , pattern)) - return tests + return test_suite @staticmethod def runTestsInDirectory(path=".", recursive=True, test_verbosity=3): - tests = ErtTestRunner.findTestsInDirectory(path, recursive) - if tests.countTestCases() > 0: - print("Running %d tests in %s" % (tests.countTestCases(), path)) - - test_runner = TextTestRunner(verbosity=test_verbosity) - result = test_runner.run(tests) - - return result.wasSuccessful() - + test_suite = ErtTestRunner.findTestsInDirectory(path, recursive) + return ErtTestRunner.runTestSuite(test_suite) + @staticmethod def runTestsInClass(classpath, test_verbosity=3): diff --git a/ThirdParty/Ert/devel/python/python/ert/test/test_area.py b/ThirdParty/Ert/devel/python/python/ert/test/test_area.py index b731699034..5fe93bd626 100644 --- a/ThirdParty/Ert/devel/python/python/ert/test/test_area.py +++ b/ThirdParty/Ert/devel/python/python/ert/test/test_area.py @@ -63,6 +63,15 @@ def free(self): def set_store(self, store): TestArea.cNamespace().set_store(self , store) + def getFullPath(self , path): + if not os.path.exists( path ): + raise IOError("Path not found:%s" % path) + + if os.path.isabs( path ): + raise IOError("Path:%s is already absolute" % path) + + return os.path.join( self.get_cwd() , path ) + class TestAreaContext(object): diff --git a/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py index 4017495878..fb1326f3ba 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/bool_vector.py @@ -124,3 +124,4 @@ def createActiveList(cls, mask): BoolVector.cNamespace().update_active_mask = cwrapper.prototype("bool string_util_update_active_mask(char*, bool_vector)") BoolVector.cNamespace().active_list = cwrapper.prototype("int_vector_obj bool_vector_alloc_active_list(bool_vector)") BoolVector.cNamespace().contains = cwrapper.prototype("bool bool_vector_contains(bool_vector, bool)") +BoolVector.cNamespace().select_unique = cwrapper.prototype("void bool_vector_select_unique(bool_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py index 8c2a73986d..cf33e7ff90 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/double_vector.py @@ -69,3 +69,4 @@ def __init__(self, default_value=0, initial_size=0): DoubleVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj double_vector_alloc_sort_perm(double_vector)") DoubleVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj double_vector_alloc_rsort_perm(double_vector)") DoubleVector.cNamespace().contains = cwrapper.prototype("bool double_vector_contains(double_vector, double)") +DoubleVector.cNamespace().select_unique = cwrapper.prototype("void double_vector_select_unique(double_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py index 285b9b860a..edde72daf3 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/int_vector.py @@ -91,5 +91,6 @@ def count(self, value): IntVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj int_vector_alloc_sort_perm(int_vector)") IntVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj int_vector_alloc_rsort_perm(int_vector)") IntVector.cNamespace().contains = cwrapper.prototype("bool int_vector_contains(int_vector, int)") +IntVector.cNamespace().select_unique = cwrapper.prototype("void int_vector_select_unique(int_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/lookup_table.py b/ThirdParty/Ert/devel/python/python/ert/util/lookup_table.py index 7b629e7c51..1201771488 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/lookup_table.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/lookup_table.py @@ -20,51 +20,100 @@ class LookupTable(BaseCClass): - def __init__(self): + + def __init__(self , lower_limit = None , upper_limit = None): super(LookupTable, self).__init__(LookupTable.cNamespace().alloc()) + if not lower_limit is None: + self.setLowerLimit( lower_limit ) + + if not upper_limit is None: + self.setUpperLimit( upper_limit ) + + + + def getMaxValue(self): + self.assertSize( 1 ) + return LookupTable.cNamespace().max(self) + + def getMinValue(self): + self.assertSize( 1 ) + return LookupTable.cNamespace().min(self) + + def getMinArg(self): + self.assertSize( 1 ) + return LookupTable.cNamespace().arg_min(self) + + def getMaxArg(self): + self.assertSize( 1 ) + return LookupTable.cNamespace().arg_max(self) + + def assertSize(self , N): + if len(self) < N: + raise ValueError("Lookup table is too small") + + def __len__(self): + return LookupTable.cNamespace().size(self) + @property + def size(self): + return len(self) + + # Deprecated properties @property def max(self): - return LookupTable.cNamespace().max(self) + return self.getMaxValue() @property def min(self): - return LookupTable.cNamespace().min(self) + return self.getMinValue() @property def arg_max(self): - return LookupTable.cNamespace().arg_max(self) + return self.getMaxArg() @property def arg_min(self): - return LookupTable.cNamespace().arg_min(self) + return self.getMinArg() + + def setLowerLimit(self , value): + LookupTable.cNamespace().set_low_limit(self, value) + + def hasLowerLimit(self): + return LookupTable.cNamespace().has_low_limit(self) + + def setUpperLimit(self , value): + LookupTable.cNamespace().set_high_limit(self, value) + + def hasUpperLimit(self): + return LookupTable.cNamespace().has_high_limit(self) def interp(self, x): + self.assertSize( 2 ) + if x < self.getMinArg(): + if not self.hasLowerLimit(): + raise ValueError("Interpolate argument:%g is outside valid interval: [%g,%g]" % (x,self.getMinArg() , self.getMaxArg())) + elif x > self.getMaxArg(): + if not self.hasUpperLimit(): + raise ValueError("Interpolate argument:%g is outside valid interval: [%g,%g]" % (x,self.getMinArg() , self.getMaxArg())) + return LookupTable.cNamespace().interp(self, x) + + def append(self, x, y): LookupTable.cNamespace().append(self, x, y) - @property - def size(self): - return LookupTable.cNamespace().size(self) - def __del__(self): LookupTable.cNamespace().free(self) - def __len__(self): - return self.size - def free(self): LookupTable.cNamespace().free(self) cwrapper = CWrapper(UTIL_LIB) -CWrapper.registerType("lookup_table", LookupTable) -CWrapper.registerType("lookup_table_obj", LookupTable.createPythonObject) -CWrapper.registerType("lookup_table_ref", LookupTable.createCReference) +CWrapper.registerObjectType("lookup_table", LookupTable) LookupTable.cNamespace().alloc = cwrapper.prototype("c_void_p lookup_table_alloc_empty()") LookupTable.cNamespace().max = cwrapper.prototype("double lookup_table_get_max_value( lookup_table )") @@ -75,3 +124,7 @@ def free(self): LookupTable.cNamespace().size = cwrapper.prototype("int lookup_table_get_size( lookup_table )") LookupTable.cNamespace().interp = cwrapper.prototype("double lookup_table_interp( lookup_table , double)") LookupTable.cNamespace().free = cwrapper.prototype("void lookup_table_free( lookup_table )") +LookupTable.cNamespace().set_low_limit = cwrapper.prototype("void lookup_table_set_low_limit( lookup_table , double)") +LookupTable.cNamespace().set_high_limit = cwrapper.prototype("void lookup_table_set_high_limit( lookup_table , double)") +LookupTable.cNamespace().has_low_limit = cwrapper.prototype("bool lookup_table_has_low_limit( lookup_table)") +LookupTable.cNamespace().has_high_limit = cwrapper.prototype("bool lookup_table_has_high_limit( lookup_table)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py b/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py index 9a0df649dc..aa2e6f67a8 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/time_vector.py @@ -179,3 +179,4 @@ def createRegular(cls , start , end , deltaString): TimeVector.cNamespace().sort_perm = cwrapper.prototype("permutation_vector_obj time_t_vector_alloc_sort_perm(time_t_vector)") TimeVector.cNamespace().rsort_perm = cwrapper.prototype("permutation_vector_obj time_t_vector_alloc_rsort_perm(time_t_vector)") TimeVector.cNamespace().contains = cwrapper.prototype("bool time_t_vector_contains(time_t_vector, time_t)") +TimeVector.cNamespace().select_unique = cwrapper.prototype("void time_t_vector_select_unique(time_t_vector)") diff --git a/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py b/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py index c1536d02c7..df4786632c 100644 --- a/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py +++ b/ThirdParty/Ert/devel/python/python/ert/util/vector_template.py @@ -510,3 +510,15 @@ def permutationSort(self, reverse=False): return self.cNamespace().rsort_perm(self) return None + + + def asList(self): + l = [0] * len(self) + for (index,value) in enumerate(self): + l[index] = value + + return l + + def selectUnique(self): + self.cNamespace().select_unique(self) + diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py index b2639e3cff..937b142f67 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py @@ -6,7 +6,7 @@ class WellInfo(BaseCClass): - def __init__(self, grid, rst_file=None): + def __init__(self, grid, rst_file=None, load_segment_information=True): """ @type grid: EclGrid @type rst_file: str or EclFile or list of str or list of EclFile @@ -17,9 +17,9 @@ def __init__(self, grid, rst_file=None): if rst_file is not None: if isinstance(rst_file, list): for item in rst_file: - self.addWellFile(item) + self.addWellFile(item, load_segment_information) else: - self.addWellFile(rst_file) + self.addWellFile(rst_file, load_segment_information) def __len__(self): @@ -66,12 +66,12 @@ def __contains__(self, item): """ return WellInfo.cNamespace().has_well(self, item) - def addWellFile(self, rst_file): + def addWellFile(self, rst_file, load_segment_information): """ @type rstfile: str or EclFile """ if isinstance(rst_file, str): - WellInfo.cNamespace().load_rstfile(self, rst_file) + WellInfo.cNamespace().load_rstfile(self, rst_file, load_segment_information) elif isinstance(rst_file, EclFile): - WellInfo.cNamespace().load_rst_eclfile(self, rst_file) + WellInfo.cNamespace().load_rst_eclfile(self, rst_file, load_segment_information) else: raise TypeError("Expected the RST file to be a filename or an EclFile instance.") @@ -87,8 +87,8 @@ def free(self): WellInfo.cNamespace().alloc = cwrapper.prototype("c_void_p well_info_alloc(ecl_grid)") WellInfo.cNamespace().free = cwrapper.prototype("void well_info_free(well_info)") -WellInfo.cNamespace().load_rstfile = cwrapper.prototype("void well_info_load_rstfile(well_info, char*)") -WellInfo.cNamespace().load_rst_eclfile = cwrapper.prototype("void well_info_load_rst_eclfile(well_info, ecl_file)") +WellInfo.cNamespace().load_rstfile = cwrapper.prototype("void well_info_load_rstfile(well_info, char*, bool)") +WellInfo.cNamespace().load_rst_eclfile = cwrapper.prototype("void well_info_load_rst_eclfile(well_info, ecl_file, bool)") WellInfo.cNamespace().get_well_count = cwrapper.prototype("int well_info_get_num_wells(well_info)") WellInfo.cNamespace().iget_well_name = cwrapper.prototype("char* well_info_iget_well_name(well_info, int)") diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py index 6c6c635314..694fbd79c4 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py @@ -71,6 +71,10 @@ def isMultiSegmentWell(self): """ @rtype: bool """ return WellState.cNamespace().is_msw(self) + def hasSegmentData(self): + """ @rtype: bool """ + return WellState.cNamespace().has_segment_data(self) + CWrapper.registerObjectType("well_state", WellState) cwrapper = CWrapper(ECL_WELL_LIB) @@ -83,6 +87,7 @@ def isMultiSegmentWell(self): WellState.cNamespace().report_number = cwrapper.prototype("int well_state_get_report_nr(well_state)") WellState.cNamespace().sim_time = cwrapper.prototype("time_t well_state_get_sim_time(well_state)") WellState.cNamespace().well_type = cwrapper.prototype("well_type_enum well_state_get_type(well_state)") +WellState.cNamespace().has_segment_data = cwrapper.prototype("bool well_state_has_segment_data(well_state)") WellState.cNamespace().has_global_connections = cwrapper.prototype("bool well_state_has_global_connections(well_state)") WellState.cNamespace().get_global_connections = cwrapper.prototype("c_void_p well_state_get_global_connections(well_state)") diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py index c8d1c2fab3..adc68e4ea4 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/models/connectors/run/sensitivity_study.py @@ -4,7 +4,8 @@ @author: perroe ''' -from ert_gui.models.connectors.run import BaseRunModel # ActiveRealizationsModel, +from ert_gui.models.connectors.run import BaseRunModel, SensitivityTargetCaseFormatModel +from ert_gui.models.connectors.run.sensitivity_study_parameters_model import SensitivityStudyParametersModel #from ert_gui.models.mixins.run_model import ErtRunError class SensitivityStudy(BaseRunModel): @@ -16,11 +17,24 @@ def __init__(self): super(SensitivityStudy, self).__init__(name = "Sensitivity Study", phase_count = 1) + def createTargetCaseFileSystem(self, parameter_name): + tmp_param_name = parameter_name + tmp_param_name.replace(":", "-") + target_case_format = SensitivityTargetCaseFormatModel().getValue() + target_fs = self.ert().getEnkfFsManager().getFileSystem(target_case_format % tmp_param_name) + return target_fs + def runSimulations(self): ''' Run all the individual simulations ''' - phase_count = 1 - self.setPhaseCount(phase_count) + parameter_model = SensitivityStudyParametersModel() + parameters_used = [p for p in parameter_model.getParameters() if parameter_model.getIsIncluded(p)] + self.setPhaseCount(len(parameters_used)) - self.setPhase(phase_count, "Simulations not implemented.") + phase = 0 + + for parameter in parameters_used: + phase += 1 + print "parameter {0} of {1}: {2}".format(phase, len(parameters_used), parameter) + self.setPhase(phase, "Parameter {0}.".format(parameter)) diff --git a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py index 4e78b62a12..a6dfe29052 100644 --- a/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py +++ b/ThirdParty/Ert/devel/python/python/ert_gui/simulation/sensitivity_study_panel.py @@ -79,7 +79,7 @@ def isConfigurationValid(self): def showParametersPopup(self): parameter_panel = SensitivityStudyParametersPanel() - dialog = ClosableDialog("Edit variables", parameter_panel, self.parent()) + dialog = ClosableDialog("Sensitivity Study Parameters", parameter_panel, self.parent()) dialog.exec_() diff --git a/ThirdParty/Ert/devel/python/test/CMakeLists.txt b/ThirdParty/Ert/devel/python/test/CMakeLists.txt index fcf4dd45aa..00607d9c16 100644 --- a/ThirdParty/Ert/devel/python/test/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/test/CMakeLists.txt @@ -50,7 +50,9 @@ set(TEST_SOURCES ert_tests/enkf/test_state_map.py ert_tests/enkf/test_time_map.py ert_tests/enkf/test_enkf_obs.py + ert_tests/enkf/test_run_arg.py ert_tests/enkf/plot/test_plot_data.py + ert_tests/enkf/data/test_gen_data.py ert_tests/enkf/data/test_gen_data_config.py ert_tests/enkf/data/test_gen_kw.py @@ -81,6 +83,7 @@ set(TEST_SOURCES ert_tests/util/test_vectors.py ert_tests/util/test_ui_return.py ert_tests/util/test_thread_pool.py + ert_tests/util/test_work_area.py ert_tests/gui/__init__.py ert_tests/gui/test_model.py @@ -186,6 +189,9 @@ add_test( NAME python.tests.ert.util.hash WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.util.test_hash.HashTest) +add_test( NAME python.tests.ert.util.work_area + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.util.test_work_area.WorkAreaTest) #add_test( NAME python.tests.ert.util.latex # WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -262,6 +268,9 @@ add_test( NAME python.tests.ert.enkf.plot.plot_block_data WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.plot.test_plot_data.PlotDataTest) +add_test( NAME python.tests.ert.enkf.data.gen_data + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.data.test_gen_data.GenDataTest) add_test( NAME python.tests.ert.enkf.data.gen_data_config WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} @@ -275,6 +284,10 @@ add_test( NAME python.tests.ert.enkf.ert_test_context WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_ert_context.ErtTestContextTest) +add_test( NAME python.tests.ert.enkf.run_arg + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.enkf.test_run_arg.RunArg) + @@ -625,6 +638,7 @@ set_property( TEST python.tests.ert.enkf.enkf_load_results_manually PROPERTY set_property( TEST python.tests.ert.enkf.ert_test_context PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.enkf.plot.plot_block_data PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.enkf.data.gen_data_config PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.enkf.data.gen_data PROPERTY LABELS Python:StatoilData ) if (ERT_BUILD_GUI) set_property( TEST python.tests.ert_gui.import PROPERTY ENVIRONMENT "ERT_SHARE_PATH=${PROJECT_SOURCE_PATH}/share") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py index 6826d75565..dc667ec151 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_fortio.py @@ -16,7 +16,7 @@ # for more details. import os from random import randint -from ert.ecl import FortIO, EclTypeEnum, EclKW +from ert.ecl import FortIO, EclTypeEnum, EclKW , openFortIO from ert.test import ExtendedTestCase, TestAreaContext @@ -123,3 +123,21 @@ def test_fortio_read_and_write_and_rewrite(self): f.close() self.assertFilesAreEqual("test", "complete") + + + + + def test_context(self): + with TestAreaContext("python/fortio/context"): + kw1 = EclKW.create("KW" , 2456 , EclTypeEnum.ECL_FLOAT_TYPE) + for i in range(len(kw1)): + kw1[i] = randint(0,1000) + + with openFortIO("file" , mode = FortIO.WRITE_MODE) as f: + kw1.fwrite( f ) + + with openFortIO("file") as f: + kw2 = EclKW.fread( f ) + + self.assertTrue( kw1 == kw2 ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data.py new file mode 100644 index 0000000000..8d0f5091f7 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_data.py @@ -0,0 +1,35 @@ +from ert.cwrap import clib, CWrapper +from ert.enkf.data.enkf_node import EnkfNode +from ert.enkf.enums.enkf_state_type_enum import EnkfStateType +from ert.enkf.node_id import NodeId +from ert.test import ErtTestContext +from ert.test.extended_testcase import ExtendedTestCase +from ert.util import BoolVector + +test_lib = clib.ert_load("libenkf") +cwrapper = CWrapper(test_lib) + +get_active_mask = cwrapper.prototype("bool_vector_ref gen_data_config_get_active_mask( gen_data_config )") +update_active_mask = cwrapper.prototype("void gen_data_config_update_active( gen_data_config, int, bool_vector)") + +class GenDataTest(ExtendedTestCase): + def setUp(self): + self.config_file = self.createTestPath("Statoil/config/with_GEN_DATA/config") + + + def test_create(self): + with ErtTestContext("gen_data_test", self.config_file) as test_context: + ert = test_context.getErt() + fs1 = ert.getEnkfFsManager().getCurrentFileSystem() + config_node = ert.ensembleConfig().getNode("TIMESHIFT") + + data_node = EnkfNode(config_node) + data_node.tryLoad(fs1, NodeId(60, 0, EnkfStateType.FORECAST)) + + gen_data = data_node.asGenData() + data = gen_data.getData() + + self.assertEqual(len(data) , 2560) + + + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py index e85c448f82..3355e1e0bd 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/data/test_gen_kw.py @@ -1,31 +1,55 @@ +import os.path from ert.enkf.data import GenKw, GenKwConfig from ert.test import TestAreaContext, ExtendedTestCase +def create_gen_kw(): + parameter_file ="MULTFLT.txt" + template_file ="MULTFLT.tmpl" + with open(parameter_file, "w") as f: + f.write("MULTFLT1 NORMAL 0 1\n") + f.write("MULTFLT2 RAW \n") + f.write("MULTFLT3 NORMAL 0 1\n") + + with open(template_file, "w") as f: + f.write(" \n") + f.write("/\n") + + + gen_kw_config = GenKwConfig("MULTFLT", template_file , parameter_file) + gen_kw = GenKw( gen_kw_config ) + + return (gen_kw_config , gen_kw) + + + class GenKwTest(ExtendedTestCase): def test_gen_kw_get_set(self): with TestAreaContext("enkf/data/gen_kwt"): - parameter_file ="MULTFLT.txt" - with open(parameter_file, "w") as f: - f.write("MULTFLT NORMAL 0 1") - - gen_kw_config = GenKwConfig("MULTFLT", "%s", "MULTFLT.txt") - - gen_kw = GenKw(gen_kw_config) + + (gen_kw_config , gen_kw) = create_gen_kw() self.assertIsInstance(gen_kw, GenKw) gen_kw[0] = 3.0 self.assertEqual(gen_kw[0], 3.0) - gen_kw["MULTFLT"] = 4.0 - self.assertEqual(gen_kw["MULTFLT"], 4.0) + gen_kw["MULTFLT1"] = 4.0 + self.assertEqual(gen_kw["MULTFLT1"], 4.0) self.assertEqual(gen_kw[0], 4.0) - self.assertEqual(len(gen_kw), 1) + gen_kw["MULTFLT2"] = 8.0 + self.assertEqual(gen_kw["MULTFLT2"], 8.0) + self.assertEqual(gen_kw[1], 8.0) + + gen_kw["MULTFLT3"] = 12.0 + self.assertEqual(gen_kw["MULTFLT3"], 12.0) + self.assertEqual(gen_kw[2], 12.0) + + self.assertEqual(len(gen_kw), 3) with self.assertRaises(IndexError): - gen_kw[1] + gen_kw[4] with self.assertRaises(TypeError): gen_kw[1.5] @@ -33,23 +57,49 @@ def test_gen_kw_get_set(self): with self.assertRaises(KeyError): gen_kw["MULTFLT_2"] - self.assertTrue("MULTFLT" in gen_kw ) - - - - - - - - - - - - + self.assertTrue("MULTFLT1" in gen_kw ) + def test_gen_kw_get_set_vector(self): + with TestAreaContext("enkf/data/gen_kwt"): + + (gen_kw_config , gen_kw) = create_gen_kw() + with self.assertRaises(ValueError): + gen_kw.setValues([0]) + with self.assertRaises(TypeError): + gen_kw.setValues(["A","B","C"]) + + gen_kw.setValues([0,1,2]) + self.assertEqual(gen_kw[0], 0) + self.assertEqual(gen_kw[1], 1) + self.assertEqual(gen_kw[2], 2) + + self.assertEqual(gen_kw["MULTFLT1"] , 0) + self.assertEqual(gen_kw["MULTFLT2"] , 1) + self.assertEqual(gen_kw["MULTFLT3"] , 2) + + + + + + def test_gen_kw_ecl_write(self): + with TestAreaContext("enkf/data/gen_kwt"): + (gen_kw_config , gen_kw) = create_gen_kw() + + with self.assertRaises(IOError): + gen_kw.eclWrite( "tmp" , "file.txt") + + gen_kw.eclWrite( None , "file.txt") + self.assertTrue( os.path.isfile( "file.txt" )) + + os.mkdir("tmp") + gen_kw.eclWrite( "tmp" , "file.txt") + self.assertTrue( os.path.isfile( "tmp/file.txt" )) + + gen_kw.eclWrite( "tmp" , "file.txt" , "tmp/export.txt") + self.assertTrue( os.path.isfile( "tmp/export.txt" )) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py index 98bbf0b0c9..58a512d3de 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf.py @@ -16,10 +16,13 @@ # for more details. import os -from ert.enkf import EnsConfig, AnalysisConfig, ModelConfig, SiteConfig, EclConfig, PlotConfig, EnkfObs, ErtTemplates, EnkfFs, EnKFState, EnkfStateType, EnkfRunEnum, EnkfVarType, ObsVector + +from ert.util import BoolVector + +from ert.enkf import EnsConfig, AnalysisConfig, ModelConfig, SiteConfig, EclConfig, PlotConfig, EnkfObs, ErtTemplates, EnkfFs, EnKFState, EnkfStateType, EnkfVarType, ObsVector , RunArg from ert.enkf.data import EnkfConfigNode from ert.enkf.enkf_main import EnKFMain -from ert.enkf.enums import EnkfObservationImplementationType, LoadFailTypeEnum, EnkfInitModeEnum, ErtImplType, RealizationStateEnum +from ert.enkf.enums import EnkfObservationImplementationType, LoadFailTypeEnum, EnkfInitModeEnum, ErtImplType, RealizationStateEnum , EnkfRunType from ert.enkf.enums.enkf_field_file_format_enum import EnkfFieldFileFormatEnum from ert.enkf.enums.enkf_truncation_type import EnkfTruncationType from ert.enkf.observations.summary_observation import SummaryObservation @@ -46,17 +49,15 @@ def test_enum(self): self.assertEnumIsFullyDefined(EnkfVarType, "enkf_var_type", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(EnkfStateType, "state_enum", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(ErtImplType, "ert_impl_type", "libenkf/include/ert/enkf/enkf_types.h") - self.assertEnumIsFullyDefined(EnkfInitModeEnum, "init_mode_enum", "libenkf/include/ert/enkf/enkf_types.h") + self.assertEnumIsFullyDefined(EnkfInitModeEnum, "init_mode_type", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(RealizationStateEnum, "realisation_state_enum", "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(EnkfTruncationType, "truncation_type", "libenkf/include/ert/enkf/enkf_types.h") + self.assertEnumIsFullyDefined(EnkfRunType, "run_mode_type" , "libenkf/include/ert/enkf/enkf_types.h") self.assertEnumIsFullyDefined(EnkfObservationImplementationType, "obs_impl_type", "libenkf/include/ert/enkf/obs_vector.h") self.assertEnumIsFullyDefined(LoadFailTypeEnum, "load_fail_type", "libenkf/include/ert/enkf/summary_config.h") self.assertEnumIsFullyDefined(EnkfFieldFileFormatEnum, "field_file_format_type", "libenkf/include/ert/enkf/field_config.h" ) - self.assertEqual(EnkfRunEnum.ENKF_ASSIMILATION, 1) - self.assertEqual(EnkfRunEnum.ENSEMBLE_EXPERIMENT, 2) - def test_observations(self): with TestAreaContext("enkf_test") as work_area: @@ -139,3 +140,38 @@ def test_enkf_create_config_file(self): EnKFMain.createNewConfig(config_file, "storage" , firste_case_name, dbase_type, num_realizations) main = EnKFMain(config_file, self.site_config_file) self.assertEqual(main.getEnsembleSize(), num_realizations) + + + def test_run_context(self): + with TestAreaContext("enkf_test") as work_area: + work_area.copy_directory(self.case_directory) + main = EnKFMain("simple_config/minimum_config", self.site_config_file) + fs_manager = main.getEnkfFsManager() + fs = fs_manager.getCurrentFileSystem( ) + iactive = BoolVector(initial_size = 10 , default_value = True) + iactive[0] = False + iactive[1] = False + run_context = main.getRunContextENSEMPLE_EXPERIMENT( fs , iactive ) + + self.assertEqual( len(run_context) , 8 ) + + with self.assertRaises(IndexError): + run_context[8] + + with self.assertRaises(TypeError): + run_context["String"] + + run_arg = run_context[0] + self.assertTrue( isinstance( run_arg , RunArg )) + + with self.assertRaises(ValueError): + run_context.iensGet(0) + + + with self.assertRaises(ValueError): + run_context.iensGet(1) + + arg0 = run_context[0] + arg2 = run_context.iensGet( 2 ) + #self.assertEqual( arg0 , arg2 ) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py index 3bb9720dee..eac694134a 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_fs.py @@ -27,8 +27,16 @@ def test_create(self): self.assertFalse(EnkfFs.exists("newFS")) arg = None - EnkfFs.createFileSystem("newFS", EnKFFSType.BLOCK_FS_DRIVER_ID, arg) + fs = EnkfFs.createFileSystem("newFS", EnKFFSType.BLOCK_FS_DRIVER_ID, arg) self.assertTrue(EnkfFs.exists("newFS")) + self.assertTrue( fs is None ) + + with TestAreaContext("create_fs2") as work_area: + work_area.copy_parent_content(self.config_file) + + new_fs = EnkfFs.createFileSystem("newFS", EnKFFSType.BLOCK_FS_DRIVER_ID, mount = True) + self.assertTrue( isinstance( new_fs , EnkfFs )) + def test_throws(self): diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py index 8651039052..97955629a9 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_enkf_library.py @@ -34,7 +34,7 @@ def test_ecl_config_creation(self): self.assertIsInstance(main.analysisConfig(), AnalysisConfig) self.assertIsInstance(main.eclConfig(), EclConfig) - with self.assertRaises(ValueError): # Null pointer! + with self.assertRaises(AssertionError): # Null pointer! self.assertIsInstance(main.eclConfig().getRefcase(), EclSum) file_system = main.getEnkfFsManager().getCurrentFileSystem() diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_run_arg.py b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_run_arg.py new file mode 100644 index 0000000000..b4e234f79f --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/enkf/test_run_arg.py @@ -0,0 +1,29 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_enkf.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os +from ert.enkf import RunArg +from ert.enkf.enums import EnkfRunType +from ert.test import ExtendedTestCase + + + +class RunArgTest(ExtendedTestCase): + + def test_create(self): + run_arg = RunArg.ENSEMBLE_EXPERIMENT(fs , 10 , 10 , "/path/to/run") + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py index a5f6285f59..d6e3d6d3ad 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/server/test_server.py @@ -27,7 +27,7 @@ except ImportError: from unittest import skipIf, skipUnless, skipIf -from ert.server import ErtServer +from ert.server import ErtServer,ErtCmdError from ert.util import StringList, TimeVector, DoubleVector from ert.test import ExtendedTestCase , TestAreaContext @@ -59,5 +59,28 @@ def testCreate(self): cmd = ["STATUS"] res = ert_server.evalCmd( cmd ) - self.assertEqual( res , ["OPEN"] ) + self.assertEqual( res , ["READY"] ) + + with self.assertRaises(ErtCmdError): + res = ert_server.evalCmd( ["UNKNWON-COMMAND"]) + + + def testSimulations(self): + with TestAreaContext("server/server") as work_area: + work_area.copy_directory_content(self.config_path) + + + ert_server = ErtServer(self.config_file) + cmd = ["INIT_SIMULATIONS"] + with self.assertRaises(ErtCmdError): + res = ert_server.evalCmd( cmd ) + + cmd = ["INIT_SIMULATIONS" , 100 , "Init_case"] + res = ert_server.evalCmd( cmd ) + + cmd = ["STATUS"] + res = ert_server.evalCmd( cmd ) + self.assertEqual( res , ["RUNNING" , 0 , 0 ]) + + cmd = ["START_SIMULATION" , "0"] diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_lookup_table.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_lookup_table.py index 6577256bde..0364460d04 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_lookup_table.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_lookup_table.py @@ -10,16 +10,32 @@ class LookupTableTest(TestCase): def test_lookup_table_no_values(self): lookup = LookupTable() - - self.assertTrue(numpy.isnan(lookup.max)) - self.assertTrue(numpy.isnan(lookup.min)) - self.assertTrue(numpy.isnan(lookup.arg_max)) - self.assertTrue(numpy.isnan(lookup.arg_min)) + self.assertEqual(len(lookup), 0) + with self.assertRaises(ValueError): + lookup.getMaxValue() + + with self.assertRaises(ValueError): + lookup.getMinValue() + + with self.assertRaises(ValueError): + lookup.getMaxArg() + + with self.assertRaises(ValueError): + lookup.getMinArg() + + with self.assertRaises(ValueError): + lookup.interp(0.25) + + + def test_lookup_table_one_value(self): + lookup = LookupTable() + lookup.append(0,0) + with self.assertRaises(ValueError): + lookup.interp(0.25) + - lookup.append(0.0, 0.0) - lookup.append(1.0, 10.0) def test_lookup_table_min_and_max(self): lookup = LookupTable() @@ -27,13 +43,39 @@ def test_lookup_table_min_and_max(self): lookup.append(0.0, 0.0) lookup.append(1.0, 10.0) - self.assertEqual(lookup.max, 10.0) - self.assertEqual(lookup.min, 0.0) - self.assertEqual(lookup.arg_max, 1.0) - self.assertEqual(lookup.arg_min, 0.0) + self.assertEqual(lookup.getMaxValue(), 10.0) + self.assertEqual(lookup.getMinValue(), 0.0) + self.assertEqual(lookup.getMaxArg(), 1.0) + self.assertEqual(lookup.getMinArg(), 0.0) self.assertEqual(len(lookup), 2) + def test_lookup_out_of_bounds(self): + lookup = LookupTable() + + lookup.append(0.0, 0.0) + lookup.append(1.0, 10.0) + + self.assertEqual( lookup.interp(0) , 0) + self.assertEqual( lookup.interp(1) , 10) + + with self.assertRaises(ValueError): + lookup.interp(-1) + + with self.assertRaises(ValueError): + lookup.interp(2) + + lookup.setLowerLimit(-1) + self.assertEqual( lookup.interp(-0.25) , -1 ) + + with self.assertRaises(ValueError): + lookup.interp(2) + + lookup.setUpperLimit(88) + self.assertEqual( lookup.interp(1.25) , 88 ) + + + def test_lookup_table_interpolation(self): lookup = LookupTable() @@ -42,3 +84,13 @@ def test_lookup_table_interpolation(self): self.assertEqual(lookup.interp(0.5), 5.0) + + def test_optional_arg(self): + lookup = LookupTable(lower_limit = -1 , upper_limit = 100) + + lookup.append(0.0, 0.0) + lookup.append(1.0, 10.0) + + self.assertEqual(lookup.interp(-1), -1.0) + self.assertEqual(lookup.interp(0.5), 5.0) + self.assertEqual(lookup.interp(2), 100.0) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py index 73b5d586bf..24fc71732f 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_vectors.py @@ -354,6 +354,25 @@ def test_contains_time(self): self.assertTrue( other not in tv) + def test_unique(self): + iv = IntVector() + iv.append(1) + iv.append(1) + iv.append(1) + iv.append(0) + iv.append(1) + iv.append(2) + iv.append(2) + iv.append(0) + iv.append(3) + iv.selectUnique() + self.assertEqual( len(iv) , 4) + self.assertEqual( iv[0] , 0 ) + self.assertEqual( iv[1] , 1 ) + self.assertEqual( iv[2] , 2 ) + self.assertEqual( iv[3] , 3 ) + + def test_time_vector_regular(self): start = datetime.datetime(2010 , 1 , 1 , 0,0,0) @@ -408,3 +427,12 @@ def test_time_vector_regular(self): trange = TimeVector.createRegular(start , datetime.date(2050, 1 , 1) , "1Y") + + def test_asList(self): + v = IntVector() + v[0] = 100 + v[1] = 10 + v[2] = 1 + + l = v.asList() + self.assertListEqual( l , [100,10,1] ) diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/util/test_work_area.py b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_work_area.py new file mode 100644 index 0000000000..0a1aacef0a --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/util/test_work_area.py @@ -0,0 +1,46 @@ +#!/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_work_area.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. + +import os.path + +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +from ert.test import ExtendedTestCase , TestAreaContext + + +class WorkAreaTest(ExtendedTestCase): + + def test_full_path(self): + with TestAreaContext("TestArea") as test_area: + with open("test_file" , "w") as fileH: + fileH.write("Something") + + self.assertTrue( os.path.isfile( "test_file") ) + + with self.assertRaises(IOError): + full_path = test_area.getFullPath( "does/not/exists" ) + + with self.assertRaises(IOError): + full_path = test_area.getFullPath( "/already/absolute" ) + + full_path = test_area.getFullPath( "test_file" ) + self.assertTrue( os.path.isfile( full_path )) + self.assertTrue( os.path.isabs( full_path )) + diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py index 87ce6f3b51..eec34e2468 100644 --- a/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py +++ b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well.py @@ -31,8 +31,24 @@ class EclWellTest(ExtendedTestCase): @classmethod def setUpClass(cls): EclWellTest.__well_info = None + EclWellTest.__well_info_with_no_well_segments = None + def getWellInfoWithNoWellSegments(self): + """ @rtype: WellInfo """ + if EclWellTest.__well_info_with_no_well_segments is None: + grid_path = self.createTestPath("Statoil/ECLIPSE/Troll/MSW/T07-4A-W2012-16-F3.EGRID") + rst_path_1 = self.createTestPath("Statoil/ECLIPSE/Troll/MSW/T07-4A-W2012-16-F3.X0135") + + grid = EclGrid(grid_path) + + rst_file = EclFile(rst_path_1, EclFileFlagEnum.ECL_FILE_CLOSE_STREAM) + + EclWellTest.__well_info_with_no_well_segments = WellInfo(grid, rst_file, False) + + + return EclWellTest.__well_info_with_no_well_segments + def getWellInfo(self): """ @rtype: WellInfo """ if EclWellTest.__well_info is None: @@ -78,17 +94,17 @@ def checkWellInfo(well_info, well_count, report_step_count): well_info = WellInfo(grid) - well_info.addWellFile(rst_path_1) + well_info.addWellFile(rst_path_1, True) checkWellInfo(well_info, well_count=5, report_step_count=[1, 1, 1, 1, 1]) - well_info.addWellFile(EclFile(rst_path_2)) + well_info.addWellFile(EclFile(rst_path_2), True) checkWellInfo(well_info, well_count=8, report_step_count=[2, 2, 2, 2, 2, 1, 1, 1]) - well_info.addWellFile(EclFile(rst_path_3)) + well_info.addWellFile(EclFile(rst_path_3), True) checkWellInfo(well_info, well_count=8, report_step_count=[3, 3, 3, 3, 3, 2, 2, 2]) - well_info.addWellFile(rst_path_4) + well_info.addWellFile(rst_path_4, True) checkWellInfo(well_info, well_count=8, report_step_count=[4, 4, 4, 4, 4, 3, 3, 3]) @@ -372,3 +388,32 @@ def test_well_connections_msw(self): self.assertFalse(connection.isFractureConnection()) self.assertTrue(connection.isMatrixConnection()) self.assertEqual(connection.direction(), WellConnectionDirectionEnum.well_conn_dirY) + + + def test_well_connections_msw_do_not_load_segments(self): + well_info = self.getWellInfoWithNoWellSegments() + + well_name = "X22AYH" + well_time_line = well_info[well_name] + well_state = well_time_line[0] + + segment_ids = [56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, + 103, 104, 105, 106, 107, 108] + + self.assertTrue(well_state.isMultiSegmentWell()) + self.assertFalse(well_state.hasSegmentData()) + + self.assertTrue(well_state.hasGlobalConnections()) + global_connections = well_state.globalConnections() + + self.assertEqual(len(global_connections), len(segment_ids)) + + for index, connection in enumerate(global_connections): + assert isinstance(connection, WellConnection) + self.assertTrue(connection.isOpen()) + self.assertTrue(connection.isMultiSegmentWell()) + self.assertEqual(connection.segmentId(), segment_ids[index]) + self.assertFalse(connection.isFractureConnection()) + self.assertTrue(connection.isMatrixConnection()) + self.assertEqual(connection.direction(), WellConnectionDirectionEnum.well_conn_dirY) From 2509fa974f9c9dd83100fe64a2494d4f2c83a328 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Fri, 24 Oct 2014 11:38:47 +0200 Subject: [PATCH 06/21] Performance : Now possible to disable load of SOIL on load --- ApplicationCode/Application/RiaApplication.cpp | 6 +++++- ApplicationCode/Application/RiaPreferences.cpp | 13 +++++++++---- ApplicationCode/Application/RiaPreferences.h | 1 + .../FileInterface/RifReaderEclipseOutput.cpp | 2 +- .../FileInterface/RifReaderInterface.cpp | 4 ++-- ApplicationCode/FileInterface/RifReaderInterface.h | 2 +- ApplicationCode/FileInterface/RifReaderSettings.cpp | 8 ++++---- ApplicationCode/FileInterface/RifReaderSettings.h | 2 +- 8 files changed, 24 insertions(+), 14 deletions(-) diff --git a/ApplicationCode/Application/RiaApplication.cpp b/ApplicationCode/Application/RiaApplication.cpp index 4e45051b09..ff2a301b19 100644 --- a/ApplicationCode/Application/RiaApplication.cpp +++ b/ApplicationCode/Application/RiaApplication.cpp @@ -642,7 +642,11 @@ bool RiaApplication::openEclipseCase(const QString& caseName, const QString& cas // Select SOIL as default result variable riv->cellResult()->setResultType(RimDefines::DYNAMIC_NATIVE); - riv->cellResult()->setResultVariable("SOIL"); + + if (m_preferences->loadAndShowSoil) + { + riv->cellResult()->setResultVariable("SOIL"); + } riv->animationMode = true; riv->loadDataAndUpdate(); diff --git a/ApplicationCode/Application/RiaPreferences.cpp b/ApplicationCode/Application/RiaPreferences.cpp index 74b51c792c..9e3948d5a0 100644 --- a/ApplicationCode/Application/RiaPreferences.cpp +++ b/ApplicationCode/Application/RiaPreferences.cpp @@ -64,9 +64,11 @@ RiaPreferences::RiaPreferences(void) CAF_PDM_InitFieldNoDefault(&lastUsedProjectFileName,"lastUsedProjectFileName", "Last Used Project File", "", "", ""); lastUsedProjectFileName.setUiHidden(true); - CAF_PDM_InitField(&autocomputeDepthRelatedProperties, "autocomputeDepth", true, "DEPTH related properties", "", "DEPTH, DX, DY, DZ, TOP, BOTTOM", ""); - + CAF_PDM_InitField(&autocomputeDepthRelatedProperties, "autocomputeDepth", true, "Compute DEPTH related properties", "", "DEPTH, DX, DY, DZ, TOP, BOTTOM", ""); autocomputeDepthRelatedProperties.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); + + CAF_PDM_InitField(&loadAndShowSoil, "loadAndShowSoil", true, "Load and show SOIL", "", "", ""); + loadAndShowSoil.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); readerSettings = new RifReaderSettings; CAF_PDM_InitFieldNoDefault(&readerSettings, "readerSettings", "Reader settings", "", "", ""); @@ -97,7 +99,8 @@ void RiaPreferences::defineEditorAttribute(const caf::PdmFieldHandle* field, QSt } } else if (field == &octaveShowHeaderInfoWhenExecutingScripts || - field == &autocomputeDepthRelatedProperties) + field == &autocomputeDepthRelatedProperties || + field == &loadAndShowSoil ) { caf::PdmUiCheckBoxEditorAttribute* myAttr = static_cast(attribute); if (myAttr) @@ -130,8 +133,9 @@ void RiaPreferences::defineUiOrdering(QString uiConfigName, caf::PdmUiOrdering& defaultSettingsGroup->add(&defaultFaultGridLineColors); defaultSettingsGroup->add(&defaultWellLabelColor); - caf::PdmUiGroup* autoComputeGroup = uiOrdering.addNewGroup("Compute when loading new case"); + caf::PdmUiGroup* autoComputeGroup = uiOrdering.addNewGroup("Behavior when loading new case"); autoComputeGroup->add(&autocomputeDepthRelatedProperties); + autoComputeGroup->add(&loadAndShowSoil); caf::PdmUiGroup* readerSettingsGroup = uiOrdering.addNewGroup("Reader settings"); std::vector readerSettingsFields; @@ -152,6 +156,7 @@ void RiaPreferences::configureForRegressionTests() showHud = false; autocomputeDepthRelatedProperties = true; + loadAndShowSoil = true; CVF_ASSERT(readerSettings); readerSettings->importFaults = false; diff --git a/ApplicationCode/Application/RiaPreferences.h b/ApplicationCode/Application/RiaPreferences.h index 604adf122a..901d1f7d6b 100644 --- a/ApplicationCode/Application/RiaPreferences.h +++ b/ApplicationCode/Application/RiaPreferences.h @@ -65,6 +65,7 @@ class RiaPreferences : public caf::PdmObject caf::PdmField lastUsedProjectFileName; caf::PdmField autocomputeDepthRelatedProperties; + caf::PdmField loadAndShowSoil; caf::PdmField readerSettings; diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp index e98b187f4b..0ddc72b675 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp @@ -454,7 +454,7 @@ bool RifReaderEclipseOutput::open(const QString& fileName, RigCaseData* eclipseC progInfo.setNextProgressIncrement(8); progInfo.setProgressDescription("Reading Well information"); - readWellCells(mainEclGrid, isSimulationWellDataEnabled()); + readWellCells(mainEclGrid, isImportOfCompleteMswDataEnabled()); progInfo.setProgressDescription("Releasing reader memory"); ecl_grid_free( mainEclGrid ); diff --git a/ApplicationCode/FileInterface/RifReaderInterface.cpp b/ApplicationCode/FileInterface/RifReaderInterface.cpp index 0c2c852827..3d0059a8a2 100644 --- a/ApplicationCode/FileInterface/RifReaderInterface.cpp +++ b/ApplicationCode/FileInterface/RifReaderInterface.cpp @@ -45,11 +45,11 @@ bool RifReaderInterface::isFaultImportEnabled() //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- -bool RifReaderInterface::isSimulationWellDataEnabled() +bool RifReaderInterface::isImportOfCompleteMswDataEnabled() { if (m_settings.notNull()) { - return m_settings->importSimulationWellData; + return m_settings->importAdvancedMswData; } return false; diff --git a/ApplicationCode/FileInterface/RifReaderInterface.h b/ApplicationCode/FileInterface/RifReaderInterface.h index 8ec215f5de..abf9160268 100644 --- a/ApplicationCode/FileInterface/RifReaderInterface.h +++ b/ApplicationCode/FileInterface/RifReaderInterface.h @@ -56,7 +56,7 @@ class RifReaderInterface : public cvf::Object void setReaderSetting(RifReaderSettings* settings); bool isFaultImportEnabled(); - bool isSimulationWellDataEnabled(); + bool isImportOfCompleteMswDataEnabled(); bool isNNCsEnabled(); virtual bool open(const QString& fileName, RigCaseData* eclipseCase) = 0; diff --git a/ApplicationCode/FileInterface/RifReaderSettings.cpp b/ApplicationCode/FileInterface/RifReaderSettings.cpp index b6d74adaa4..f221b6fdaa 100644 --- a/ApplicationCode/FileInterface/RifReaderSettings.cpp +++ b/ApplicationCode/FileInterface/RifReaderSettings.cpp @@ -34,11 +34,11 @@ RifReaderSettings::RifReaderSettings() CAF_PDM_InitField(&importFaults, "importFaults", true, "Import faults", "", "", ""); importFaults.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); - CAF_PDM_InitField(&importSimulationWellData, "importSimulationWellData", true, "Import simulation wells", "", "", ""); - importSimulationWellData.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); - CAF_PDM_InitField(&importNNCs, "importSimulationNNCs", true, "Import NNCs", "", "", ""); importNNCs.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); + + CAF_PDM_InitField(&importAdvancedMswData, "importAdvancedMswData", false, "Import advanced MSW data", "", "", ""); + importAdvancedMswData.setUiLabelPosition(caf::PdmUiItemInfo::HIDDEN); } //-------------------------------------------------------------------------------------------------- @@ -47,7 +47,7 @@ RifReaderSettings::RifReaderSettings() void RifReaderSettings::defineEditorAttribute(const caf::PdmFieldHandle* field, QString uiConfigName, caf::PdmUiEditorAttribute* attribute) { if (field == &importFaults || - field == &importSimulationWellData || + field == &importAdvancedMswData || field == &importNNCs) { caf::PdmUiCheckBoxEditorAttribute* myAttr = static_cast(attribute); diff --git a/ApplicationCode/FileInterface/RifReaderSettings.h b/ApplicationCode/FileInterface/RifReaderSettings.h index 793495ed3f..8f4a8b7deb 100644 --- a/ApplicationCode/FileInterface/RifReaderSettings.h +++ b/ApplicationCode/FileInterface/RifReaderSettings.h @@ -37,8 +37,8 @@ class RifReaderSettings : public caf::PdmObject RifReaderSettings(); caf::PdmField importFaults; - caf::PdmField importSimulationWellData; caf::PdmField importNNCs; + caf::PdmField importAdvancedMswData; protected: virtual void defineEditorAttribute(const caf::PdmFieldHandle* field, QString uiConfigName, caf::PdmUiEditorAttribute* attribute); From 3b7919a9134e90baca485de08f43250471b344e5 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Thu, 23 Oct 2014 11:41:28 +0200 Subject: [PATCH 07/21] Fix for executing a script on result cases with no view --- .../RimIdenticalGridCaseGroup.cpp | 37 ++++++++++++++++ .../RimStatisticsCaseEvaluator.cpp | 44 +++++++++---------- .../ProjectDataModel/RimUiTreeModelPdm.cpp | 2 - 3 files changed, 59 insertions(+), 24 deletions(-) diff --git a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp index 68aae7017e..a79c07b647 100644 --- a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp +++ b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp @@ -32,6 +32,7 @@ #include "RimResultCase.h" #include "RimResultSlot.h" #include "RimStatisticsCase.h" +#include "RigCaseCellResultsData.h" #include "cafProgressInfo.h" @@ -203,6 +204,42 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() computeUnionOfActiveCells(); } + // Propagate result meta data to all cases + + { + RifReaderInterface::PorosityModelResultType poroModel = RifReaderInterface::MATRIX_RESULTS; + + std::vector timeStepDates = mainEclipseCase->results(poroModel)->timeStepDates(0); + const std::vector resultInfos = mainEclipseCase->results(poroModel)->infoForEachResultIndex(); + + for (size_t i = 1; i < caseCollection()->reservoirs.size(); i++) + { + RimResultCase* rimReservoir = dynamic_cast(caseCollection()->reservoirs[i]); + if (!rimReservoir) continue; // Input reservoir + + RimReservoirCellResultsStorage* cellResultsStorage = rimReservoir->results(poroModel); + + for (size_t resIdx = 0; resIdx < resultInfos.size(); resIdx++) + { + RimDefines::ResultCatType resultType = resultInfos[resIdx].m_resultType; + QString resultName = resultInfos[resIdx].m_resultName; + bool needsToBeStored = resultInfos[resIdx].m_needsToBeStored; + + size_t scalarResultIndex = cellResultsStorage->cellResults()->findScalarResultIndex(resultType, resultName); + if (scalarResultIndex == cvf::UNDEFINED_SIZE_T) + { + size_t scalarResultIndex = cellResultsStorage->cellResults()->addEmptyScalarResult(resultType, resultName, needsToBeStored); + cellResultsStorage->cellResults()->setTimeStepDates(scalarResultIndex, timeStepDates); + + std::vector< std::vector >& dataValues = cellResultsStorage->cellResults()->cellScalarResults(scalarResultIndex); + dataValues.resize(timeStepDates.size()); + } + } + + cellResultsStorage->cellResults()->createPlaceholderResultEntries(); + } + } + // "Load" the statistical cases for (size_t i = 0; i < statisticsCaseCollection()->reservoirs.size(); i++) diff --git a/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp b/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp index 883d5c6d4e..b38eb8763a 100644 --- a/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp +++ b/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp @@ -109,28 +109,28 @@ void RimStatisticsCaseEvaluator::evaluateForResults(const QList& result size_t activeCellCount = m_destinationCase->activeCellInfo(poroModel)->reservoirActiveCellCount(); RigCaseCellResultsData* destCellResultsData = m_destinationCase->results(poroModel); - // Special handling if SOIL is asked for - // Build SGAS/SWAT meta data, SOIL is automatically generated as part of RigCaseCellResultsData::findOrLoadScalarResultForTimeStep - if (resultName.toUpper() == "SOIL") - { - size_t swatIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SWAT"); - if (swatIndex != cvf::UNDEFINED_SIZE_T) - { - buildSourceMetaData(poroModel, resultType, "SWAT"); - } - - size_t sgasIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SGAS"); - if (sgasIndex != cvf::UNDEFINED_SIZE_T) - { - buildSourceMetaData(poroModel, resultType, "SGAS"); - } - } - else - { - // Meta info is loaded from disk for first case only - // Build metadata for all other source cases - buildSourceMetaData(poroModel, resultType, resultName); - } +// // Special handling if SOIL is asked for +// // Build SGAS/SWAT meta data, SOIL is automatically generated as part of RigCaseCellResultsData::findOrLoadScalarResultForTimeStep +// if (resultName.toUpper() == "SOIL") +// { +// size_t swatIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SWAT"); +// if (swatIndex != cvf::UNDEFINED_SIZE_T) +// { +// buildSourceMetaData(poroModel, resultType, "SWAT"); +// } +// +// size_t sgasIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SGAS"); +// if (sgasIndex != cvf::UNDEFINED_SIZE_T) +// { +// buildSourceMetaData(poroModel, resultType, "SGAS"); +// } +// } +// else +// { +// // Meta info is loaded from disk for first case only +// // Build metadata for all other source cases +// buildSourceMetaData(poroModel, resultType, resultName); +// } // Create new result data structures to contain the statistical values std::vector statisticalResultNames; diff --git a/ApplicationCode/ProjectDataModel/RimUiTreeModelPdm.cpp b/ApplicationCode/ProjectDataModel/RimUiTreeModelPdm.cpp index 81a9750ead..7b638e7d51 100644 --- a/ApplicationCode/ProjectDataModel/RimUiTreeModelPdm.cpp +++ b/ApplicationCode/ProjectDataModel/RimUiTreeModelPdm.cpp @@ -404,8 +404,6 @@ RimReservoirView* RimUiTreeModelPdm::addReservoirView(const QModelIndex& itemInd if (collectionItem) { RimCase* rimReservoir = dynamic_cast(collectionItem->dataObject().p()); - rimReservoir->openEclipseGridFile(); - RimReservoirView* insertedView = rimReservoir->createAndAddReservoirView(); // Must be run before buildViewItems, as wells are created in this function From 31261a800f5b16355b7fda1a354839472abd5789 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Mon, 27 Oct 2014 07:19:04 +0100 Subject: [PATCH 08/21] Removed obsolete code and added comments --- .../RimIdenticalGridCaseGroup.cpp | 9 +++- .../RimStatisticsCaseEvaluator.cpp | 49 ++----------------- 2 files changed, 10 insertions(+), 48 deletions(-) diff --git a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp index a79c07b647..32b4f4c81e 100644 --- a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp +++ b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp @@ -164,7 +164,9 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() return; } - // Read active cell info from all source cases + // Action A : Read active cell info + // Read active cell info from all source cases. The file access is optimized for this purpose, and result meta data + // is copied from main case to all other cases (see "Action B") caf::ProgressInfo info(caseCollection()->reservoirs.size(), "Case group - Reading Active Cell data"); for (size_t i = 1; i < caseCollection()->reservoirs.size(); i++) @@ -204,7 +206,10 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() computeUnionOfActiveCells(); } - // Propagate result meta data to all cases + // Action B : Copy result meta data from main case to all other cases in grid case group + + // This code was originally part of RimStatisticsCaseEvaluator, but moved here to be a general solution + // for all cases { RifReaderInterface::PorosityModelResultType poroModel = RifReaderInterface::MATRIX_RESULTS; diff --git a/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp b/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp index b38eb8763a..70524a840b 100644 --- a/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp +++ b/ApplicationCode/ProjectDataModel/RimStatisticsCaseEvaluator.cpp @@ -67,30 +67,6 @@ QString createResultNameRange(const QString& resultName) { return resultName + QString createResultNamePVal(const QString& resultName, double pValPos) { return resultName + "_P_" + QString::number(pValPos); } -//-------------------------------------------------------------------------------------------------- -/// -//-------------------------------------------------------------------------------------------------- -void RimStatisticsCaseEvaluator::buildSourceMetaData(RifReaderInterface::PorosityModelResultType poroModel, RimDefines::ResultCatType resultType, const QString& resultName) -{ - if (m_sourceCases.size() == 0) return; - - std::vector timeStepDates = m_sourceCases[0]->results(poroModel)->cellResults()->timeStepDates(0); - - for (size_t caseIdx = 1; caseIdx < m_sourceCases.size(); caseIdx++) - { - RimReservoirCellResultsStorage* cellResultsStorage = m_sourceCases[caseIdx]->results(poroModel); - size_t scalarResultIndex = cellResultsStorage->cellResults()->findScalarResultIndex(resultType, resultName); - if (scalarResultIndex == cvf::UNDEFINED_SIZE_T) - { - size_t scalarResultIndex = cellResultsStorage->cellResults()->addEmptyScalarResult(resultType, resultName, false); - cellResultsStorage->cellResults()->setTimeStepDates(scalarResultIndex, timeStepDates); - - std::vector< std::vector >& dataValues = cellResultsStorage->cellResults()->cellScalarResults(scalarResultIndex); - dataValues.resize(timeStepDates.size()); - } - } -} - //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- @@ -109,28 +85,9 @@ void RimStatisticsCaseEvaluator::evaluateForResults(const QList& result size_t activeCellCount = m_destinationCase->activeCellInfo(poroModel)->reservoirActiveCellCount(); RigCaseCellResultsData* destCellResultsData = m_destinationCase->results(poroModel); -// // Special handling if SOIL is asked for -// // Build SGAS/SWAT meta data, SOIL is automatically generated as part of RigCaseCellResultsData::findOrLoadScalarResultForTimeStep -// if (resultName.toUpper() == "SOIL") -// { -// size_t swatIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SWAT"); -// if (swatIndex != cvf::UNDEFINED_SIZE_T) -// { -// buildSourceMetaData(poroModel, resultType, "SWAT"); -// } -// -// size_t sgasIndex = m_sourceCases.at(0)->results(poroModel)->cellResults()->findScalarResultIndex(resultType, "SGAS"); -// if (sgasIndex != cvf::UNDEFINED_SIZE_T) -// { -// buildSourceMetaData(poroModel, resultType, "SGAS"); -// } -// } -// else -// { -// // Meta info is loaded from disk for first case only -// // Build metadata for all other source cases -// buildSourceMetaData(poroModel, resultType, resultName); -// } + // Placeholder data used to be created here, + // this is now moved to RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() + // Create new result data structures to contain the statistical values std::vector statisticalResultNames; From 5b5d0ffa5a9c44360193213803ae0d5adcdf8779 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Mon, 27 Oct 2014 08:00:23 +0100 Subject: [PATCH 09/21] Show generated static result for all time steps --- .../RiaPropertyDataCommands.cpp | 40 +++++++++++++++++++ 1 file changed, 40 insertions(+) diff --git a/ApplicationCode/SocketInterface/RiaPropertyDataCommands.cpp b/ApplicationCode/SocketInterface/RiaPropertyDataCommands.cpp index 048da8f0ca..0adb7e85cc 100644 --- a/ApplicationCode/SocketInterface/RiaPropertyDataCommands.cpp +++ b/ApplicationCode/SocketInterface/RiaPropertyDataCommands.cpp @@ -635,6 +635,26 @@ class RiaSetActiveCellProperty: public RiaSocketCommand m_currentReservoir->reservoirData() && m_currentReservoir->reservoirData()->results(m_porosityModelEnum) ) { + // Adjust the result data if only one time step is requested so the result behaves like a static result + if (m_requestedTimesteps.size() == 1 && m_currentScalarIndex != cvf::UNDEFINED_SIZE_T) + { + std::vector< std::vector >* scalarResultFrames = NULL; + scalarResultFrames = &(m_currentReservoir->results(m_porosityModelEnum)->cellResults()->cellScalarResults(m_currentScalarIndex)); + size_t lastIndexWithDataPresent = cvf::UNDEFINED_SIZE_T; + for (size_t i = 0; i < scalarResultFrames->size(); i++) + { + if ((*scalarResultFrames)[i].size() > 0) + { + lastIndexWithDataPresent = i; + } + } + + if (lastIndexWithDataPresent == 0) + { + scalarResultFrames->resize(1); + } + } + m_currentReservoir->reservoirData()->results(m_porosityModelEnum)->recalculateStatistics(m_currentScalarIndex); } @@ -961,6 +981,26 @@ class RiaSetGridProperty : public RiaSocketCommand m_currentReservoir->reservoirData() && m_currentReservoir->reservoirData()->results(m_porosityModelEnum) ) { + // Adjust the result data if only one time step is requested so the result behaves like a static result + if (m_requestedTimesteps.size() == 1 && m_currentScalarIndex != cvf::UNDEFINED_SIZE_T) + { + std::vector< std::vector >* scalarResultFrames = NULL; + scalarResultFrames = &(m_currentReservoir->results(m_porosityModelEnum)->cellResults()->cellScalarResults(m_currentScalarIndex)); + size_t lastIndexWithDataPresent = cvf::UNDEFINED_SIZE_T; + for (size_t i = 0; i < scalarResultFrames->size(); i++) + { + if ((*scalarResultFrames)[i].size() > 0) + { + lastIndexWithDataPresent = i; + } + } + + if (lastIndexWithDataPresent == 0) + { + scalarResultFrames->resize(1); + } + } + m_currentReservoir->reservoirData()->results(m_porosityModelEnum)->recalculateStatistics(m_currentScalarIndex); } From babe812ebce5c707c56c206bea4aada4700aa323 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Mon, 27 Oct 2014 12:25:52 +0100 Subject: [PATCH 10/21] Fixed memory leak --- ApplicationCode/ReservoirDataModel/RigStatisticsCalculator.h | 4 ++-- ApplicationCode/RiaMain.cpp | 1 + 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/ApplicationCode/ReservoirDataModel/RigStatisticsCalculator.h b/ApplicationCode/ReservoirDataModel/RigStatisticsCalculator.h index 7ecc4f48ee..011384b67b 100644 --- a/ApplicationCode/ReservoirDataModel/RigStatisticsCalculator.h +++ b/ApplicationCode/ReservoirDataModel/RigStatisticsCalculator.h @@ -61,7 +61,7 @@ class RigNativeStatCalc : public RigStatisticsCalculator virtual size_t timeStepCount(); private: - cvf::ref m_resultsData; + RigCaseCellResultsData* m_resultsData; size_t m_scalarResultIndex; }; @@ -85,5 +85,5 @@ class RigMultipleDatasetStatCalc : public RigStatisticsCalculator virtual size_t timeStepCount(); private: - cvf::Collection m_nativeStatisticsCalculators; + std::vector m_nativeStatisticsCalculators; }; diff --git a/ApplicationCode/RiaMain.cpp b/ApplicationCode/RiaMain.cpp index 7ff10cc256..0c298802d2 100644 --- a/ApplicationCode/RiaMain.cpp +++ b/ApplicationCode/RiaMain.cpp @@ -20,6 +20,7 @@ #include "RiaApplication.h" #include "RiuMainWindow.h" +#include int main(int argc, char *argv[]) { From da31522ae9cfdecb1fa83c1dfcc15548a87c119b Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Mon, 27 Oct 2014 14:09:19 +0100 Subject: [PATCH 11/21] Removed invalid include --- ApplicationCode/RiaMain.cpp | 2 -- 1 file changed, 2 deletions(-) diff --git a/ApplicationCode/RiaMain.cpp b/ApplicationCode/RiaMain.cpp index 0c298802d2..1fb7745188 100644 --- a/ApplicationCode/RiaMain.cpp +++ b/ApplicationCode/RiaMain.cpp @@ -20,8 +20,6 @@ #include "RiaApplication.h" #include "RiuMainWindow.h" -#include - int main(int argc, char *argv[]) { RiaApplication app(argc, argv); From 55b5da018cf47836da488a4b6d773f6892d6e12e Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Tue, 28 Oct 2014 09:39:26 +0100 Subject: [PATCH 12/21] Ternary : Clamp texture coordinates to avoid texture edge issues --- .../RivTernaryScalarMapper.cpp | 26 +++++++++++-------- 1 file changed, 15 insertions(+), 11 deletions(-) diff --git a/ApplicationCode/ModelVisualization/RivTernaryScalarMapper.cpp b/ApplicationCode/ModelVisualization/RivTernaryScalarMapper.cpp index b16a8d3c7c..b0c5debb5e 100644 --- a/ApplicationCode/ModelVisualization/RivTernaryScalarMapper.cpp +++ b/ApplicationCode/ModelVisualization/RivTernaryScalarMapper.cpp @@ -37,20 +37,24 @@ RivTernaryScalarMapper::RivTernaryScalarMapper(const cvf::Color3f& undefScalarCo //-------------------------------------------------------------------------------------------------- cvf::Vec2f RivTernaryScalarMapper::mapToTextureCoord(double soil, double sgas, bool isTransparent) const { - double soilNormalized = (soil - m_rangeMinSoil) * m_soilFactor; - soilNormalized = cvf::Math::clamp(soilNormalized, 0.0, 1.0); + // Clamp the float texture coordinate to avoid edge issues when looking up the texture coordinate + // The issue was detected on Linux, no similar issues has been seen on Windows + double edgeClampDelta = 0.001; - double sgasNormalized = (sgas - m_rangeMinSgas) * m_sgasFactor; - sgasNormalized = cvf::Math::clamp(sgasNormalized, 0.0, 1.0 - soilNormalized); - sgasNormalized /= 2.0; + double soilNormalized = (soil - m_rangeMinSoil) * m_soilFactor; + soilNormalized = cvf::Math::clamp(soilNormalized, edgeClampDelta, 1.0 - edgeClampDelta); - if (isTransparent) - { - sgasNormalized += 0.5; - } + double sgasNormalized = (sgas - m_rangeMinSgas) * m_sgasFactor; + sgasNormalized = cvf::Math::clamp(sgasNormalized, edgeClampDelta, 1.0 - soilNormalized); + sgasNormalized /= 2.0; + + if (isTransparent) + { + sgasNormalized += 0.5; + } - cvf::Vec2f texCoord(static_cast(soilNormalized), static_cast(sgasNormalized)); - return texCoord; + cvf::Vec2f texCoord(static_cast(soilNormalized), static_cast(sgasNormalized)); + return texCoord; } //-------------------------------------------------------------------------------------------------- From 79b45e70085f46e35031f1bd06d2e9bbd0e042df Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Tue, 28 Oct 2014 10:15:20 +0100 Subject: [PATCH 13/21] Create placeholder results for main case in case group --- .../ProjectDataModel/RimIdenticalGridCaseGroup.cpp | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp index 32b4f4c81e..9e72751e75 100644 --- a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp +++ b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp @@ -158,12 +158,20 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() RimCase* mainCase = caseCollection()->reservoirs[0]; mainCase->openEclipseGridFile(); RigCaseData* mainEclipseCase = mainCase->reservoirData(); - if (!mainEclipseCase) + if (mainEclipseCase) + { + RifReaderInterface::PorosityModelResultType poroModel = RifReaderInterface::MATRIX_RESULTS; + RimReservoirCellResultsStorage* cellResultsStorage = mainCase->results(poroModel); + + cellResultsStorage->cellResults()->createPlaceholderResultEntries(); + } + else { // Error message return; } + // Action A : Read active cell info // Read active cell info from all source cases. The file access is optimized for this purpose, and result meta data // is copied from main case to all other cases (see "Action B") From 5bb0b99aced42ff1b065e28f932a9e5b58fc82af Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Tue, 28 Oct 2014 10:17:02 +0100 Subject: [PATCH 14/21] Rename --- .../ProjectDataModel/RimIdenticalGridCaseGroup.cpp | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp index 9e72751e75..7e4a325b50 100644 --- a/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp +++ b/ApplicationCode/ProjectDataModel/RimIdenticalGridCaseGroup.cpp @@ -157,8 +157,8 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() RimCase* mainCase = caseCollection()->reservoirs[0]; mainCase->openEclipseGridFile(); - RigCaseData* mainEclipseCase = mainCase->reservoirData(); - if (mainEclipseCase) + RigCaseData* rigCaseData = mainCase->reservoirData(); + if (rigCaseData) { RifReaderInterface::PorosityModelResultType poroModel = RifReaderInterface::MATRIX_RESULTS; RimReservoirCellResultsStorage* cellResultsStorage = mainCase->results(poroModel); @@ -182,7 +182,7 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() RimResultCase* rimReservoir = dynamic_cast(caseCollection()->reservoirs[i]); if(!rimReservoir) continue; // Input reservoir - if (!rimReservoir->openAndReadActiveCellData(mainEclipseCase)) + if (!rimReservoir->openAndReadActiveCellData(rigCaseData)) { // Error message continue; @@ -191,7 +191,7 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() info.incrementProgress(); } - m_mainGrid = mainEclipseCase->mainGrid(); + m_mainGrid = rigCaseData->mainGrid(); // Check if we need to calculate the union of the active cells @@ -222,8 +222,8 @@ void RimIdenticalGridCaseGroup::loadMainCaseAndActiveCellInfo() { RifReaderInterface::PorosityModelResultType poroModel = RifReaderInterface::MATRIX_RESULTS; - std::vector timeStepDates = mainEclipseCase->results(poroModel)->timeStepDates(0); - const std::vector resultInfos = mainEclipseCase->results(poroModel)->infoForEachResultIndex(); + std::vector timeStepDates = rigCaseData->results(poroModel)->timeStepDates(0); + const std::vector resultInfos = rigCaseData->results(poroModel)->infoForEachResultIndex(); for (size_t i = 1; i < caseCollection()->reservoirs.size(); i++) { From 043584b1b16da44330eae6b2dd4754fe67074dde Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Tue, 28 Oct 2014 11:07:59 +0100 Subject: [PATCH 15/21] Faults : Improved robustness of fault names including space --- .../FileInterface_UnitTests/Ert-Test.cpp | 41 +++++++++++-------- .../RifEclipseInputFileTools.cpp | 5 ++- 2 files changed, 26 insertions(+), 20 deletions(-) diff --git a/ApplicationCode/FileInterface/FileInterface_UnitTests/Ert-Test.cpp b/ApplicationCode/FileInterface/FileInterface_UnitTests/Ert-Test.cpp index bdb0ce65ce..01dac456aa 100644 --- a/ApplicationCode/FileInterface/FileInterface_UnitTests/Ert-Test.cpp +++ b/ApplicationCode/FileInterface/FileInterface_UnitTests/Ert-Test.cpp @@ -106,7 +106,9 @@ TEST(RigReservoirTest, WellTestErt) well_info_free( well_info ); } +#endif +#if 0 //-------------------------------------------------------------------------------------------------- /// This file contains test code taken from the test cases in ERT source code. // There is a typedef issue (center) between ERT and QTextStream, so this file does not include any @@ -149,10 +151,12 @@ TEST(RigReservoirTest, ReadFaultsRecursively) { //TODO: Establish a way to define location of test model files - QString filename("d:/Models/Statoil/TEST_RKMFAULTS/TEST_RKMFAULTS.DATA"); + //QString filename("d:/Models/Statoil/TEST_RKMFAULTS/TEST_RKMFAULTS.DATA"); + QString filename("d:/Models/Statoil/testcase_juli_2011/data/TEST10K_FLT_LGR_NNC.DATA"); + // QString filename("d:/gitroot/ResInsight/TestModels/fault_test/regular27cell.DATA"); - QString outFilename = "c:/tmp/TestModels/TEST_RKMFAULTS/msj_faults.txt"; + QString outFilename = "d:/tmp/msj_faults.txt"; QFile outputFile(outFilename); { if (!outputFile.open(QIODevice::WriteOnly)) @@ -165,7 +169,8 @@ TEST(RigReservoirTest, ReadFaultsRecursively) cvf::Collection faults; - RifEclipseInputFileTools::readFaultsInGridSection(filename, faults); + std::vector filenamesWithFaults; + RifEclipseInputFileTools::readFaultsInGridSection(filename, faults, filenamesWithFaults); // EXPECT_EQ(4, faults.size()); @@ -178,21 +183,21 @@ TEST(RigReservoirTest, ReadFaultsRecursively) for (size_t faceType = 0; faceType < 6; faceType++) { cvf::StructGridInterface::FaceType faceEnum = cvf::StructGridInterface::FaceType(faceType); - const std::vector& cellRanges = rigFault->cellRangeForFace(faceEnum); - - for (size_t i = 0; i < cellRanges.size(); i++) - { - cvf::Vec3st min, max; - cellRanges[i].range(min, max); - - QString tmp; - tmp = tmp.sprintf("min i=%3d j=%3d k=%3d - max i=%3d j=%3d k=%3d \n", min.x(), min.y(), min.z(), max.x(), max.y(), max.z()); - - outStream << tmp; - -// printf("min i=%3d j=%3d k=%3d - max i=%3d j=%3d k=%3d ", min.x(), min.y(), min.z(), max.x(), max.y(), max.z()); -// printf("\n"); - } +// const std::vector& cellRanges = rigFault->cellRangeForFace(faceEnum); +// +// for (size_t i = 0; i < cellRanges.size(); i++) +// { +// cvf::Vec3st min, max; +// cellRanges[i].range(min, max); +// +// QString tmp; +// tmp = tmp.sprintf("min i=%3d j=%3d k=%3d - max i=%3d j=%3d k=%3d \n", min.x(), min.y(), min.z(), max.x(), max.y(), max.z()); +// +// outStream << tmp; +// +// // printf("min i=%3d j=%3d k=%3d - max i=%3d j=%3d k=%3d ", min.x(), min.y(), min.z(), max.x(), max.y(), max.z()); +// // printf("\n"); +// } } } } diff --git a/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp b/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp index 8ccdbf24e8..dff538c9d7 100644 --- a/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp +++ b/ApplicationCode/FileInterface/RifEclipseInputFileTools.cpp @@ -906,6 +906,9 @@ void RifEclipseInputFileTools::readFaults(QFile &data, qint64 filePos, cvf::Coll // Replace tab with space to be able to split the string using space as splitter line.replace("\t", " "); + // Replace character ' used to mark start and end of fault name + line.remove("'"); + QStringList entries = line.split(" ", QString::SkipEmptyParts); if (entries.size() < 8) { @@ -913,7 +916,6 @@ void RifEclipseInputFileTools::readFaults(QFile &data, qint64 filePos, cvf::Coll } QString name = entries[0]; - name.remove("'"); int i1, i2, j1, j2, k1, k2; i1 = entries[1].toInt(); @@ -924,7 +926,6 @@ void RifEclipseInputFileTools::readFaults(QFile &data, qint64 filePos, cvf::Coll k2 = entries[6].toInt(); QString faceString = entries[7]; - faceString.remove("'"); cvf::StructGridInterface::FaceEnum cellFaceEnum = RifEclipseInputFileTools::faceEnumFromText(faceString); From d9d4fdab3f5838ac9f5f02332f69d15e783943a4 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Tue, 28 Oct 2014 18:33:23 +0100 Subject: [PATCH 16/21] Compute placeholder results when creating grid case group --- ApplicationCode/Application/RiaApplication.cpp | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/ApplicationCode/Application/RiaApplication.cpp b/ApplicationCode/Application/RiaApplication.cpp index ff2a301b19..7110ef97d1 100644 --- a/ApplicationCode/Application/RiaApplication.cpp +++ b/ApplicationCode/Application/RiaApplication.cpp @@ -1792,6 +1792,12 @@ bool RiaApplication::addEclipseCases(const QStringList& fileNames) info.setProgress(i); } + if (gridCaseGroup) + { + // Create placeholder results and propagate results info from main case to all other cases + gridCaseGroup->loadMainCaseAndActiveCellInfo(); + } + RimUiTreeModelPdm* uiModel = RiuMainWindow::instance()->uiPdmModel(); uiModel->updateUiSubTree( m_project->activeOilField()->analysisModels()); From cff0313519da1cd36c358b2aa278933449b18491 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Wed, 29 Oct 2014 08:13:37 +0100 Subject: [PATCH 17/21] Bugfix: Do not change mesh mode when adding a range filter --- ApplicationCode/ProjectDataModel/RimReservoirView.cpp | 9 +++++++++ ApplicationCode/ProjectDataModel/RimReservoirView.h | 1 + ApplicationCode/UserInterface/RiuViewer.cpp | 6 +++--- 3 files changed, 13 insertions(+), 3 deletions(-) diff --git a/ApplicationCode/ProjectDataModel/RimReservoirView.cpp b/ApplicationCode/ProjectDataModel/RimReservoirView.cpp index b592adfb51..76a37bda57 100644 --- a/ApplicationCode/ProjectDataModel/RimReservoirView.cpp +++ b/ApplicationCode/ProjectDataModel/RimReservoirView.cpp @@ -1636,6 +1636,15 @@ void RimReservoirView::setShowFaultsOnly(bool showFaults) } } + +//-------------------------------------------------------------------------------------------------- +/// +//-------------------------------------------------------------------------------------------------- +void RimReservoirView::setSurfaceDrawstyle() +{ + if (surfaceMode() != NO_SURFACE) surfaceMode.setValueFromUi(SURFACE); +} + //-------------------------------------------------------------------------------------------------- /// // Surf: No Fault Surf diff --git a/ApplicationCode/ProjectDataModel/RimReservoirView.h b/ApplicationCode/ProjectDataModel/RimReservoirView.h index 5a85363b71..8b82ba0296 100644 --- a/ApplicationCode/ProjectDataModel/RimReservoirView.h +++ b/ApplicationCode/ProjectDataModel/RimReservoirView.h @@ -157,6 +157,7 @@ class RimReservoirView : public caf::PdmObject void setMeshSurfDrawstyle(); void setSurfOnlyDrawstyle(); void setFaultMeshSurfDrawstyle(); + void setSurfaceDrawstyle(); void setShowFaultsOnly(bool showFaults); bool isGridVisualizationMode() const; diff --git a/ApplicationCode/UserInterface/RiuViewer.cpp b/ApplicationCode/UserInterface/RiuViewer.cpp index 730db7629c..ece963d70a 100644 --- a/ApplicationCode/UserInterface/RiuViewer.cpp +++ b/ApplicationCode/UserInterface/RiuViewer.cpp @@ -294,7 +294,7 @@ void RiuViewer::slotRangeFilterI() mainWindow->setCurrentObjectInTreeView(rangeFilter); } - m_reservoirView->setShowFaultsOnly(false); + m_reservoirView->setSurfaceDrawstyle(); } //-------------------------------------------------------------------------------------------------- @@ -329,7 +329,7 @@ void RiuViewer::slotRangeFilterJ() mainWindow->setCurrentObjectInTreeView(rangeFilter); } - m_reservoirView->setShowFaultsOnly(false); + m_reservoirView->setSurfaceDrawstyle(); } //-------------------------------------------------------------------------------------------------- @@ -364,7 +364,7 @@ void RiuViewer::slotRangeFilterK() mainWindow->setCurrentObjectInTreeView(rangeFilter); } - m_reservoirView->setShowFaultsOnly(false); + m_reservoirView->setSurfaceDrawstyle(); } //-------------------------------------------------------------------------------------------------- From 619b7a211acb5c06322b362cc0f5ecb843122387 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Wed, 29 Oct 2014 09:34:57 +0100 Subject: [PATCH 18/21] Fix for dates before 1970 --- .../RifEclipseOutputFileTools.cpp | 35 +++++++++++++++---- .../RifEclipseRestartDataAccess.h | 1 + .../RifEclipseRestartFilesetAccess.cpp | 20 +++++++++++ .../RifEclipseRestartFilesetAccess.h | 2 ++ .../RifEclipseUnifiedRestartFileAccess.cpp | 29 +++++++++++++++ .../RifEclipseUnifiedRestartFileAccess.h | 2 ++ .../FileInterface/RifReaderEclipseOutput.cpp | 29 ++++++++++++++- 7 files changed, 111 insertions(+), 7 deletions(-) diff --git a/ApplicationCode/FileInterface/RifEclipseOutputFileTools.cpp b/ApplicationCode/FileInterface/RifEclipseOutputFileTools.cpp index 0bf35563c4..85926f9b81 100644 --- a/ApplicationCode/FileInterface/RifEclipseOutputFileTools.cpp +++ b/ApplicationCode/FileInterface/RifEclipseOutputFileTools.cpp @@ -26,9 +26,12 @@ #include "ecl_grid.h" #include "ecl_rsthead.h" +#include "cafProgressInfo.h" + #include #include -#include "cafProgressInfo.h" + +#include //-------------------------------------------------------------------------------------------------- @@ -46,6 +49,16 @@ RifEclipseOutputFileTools::~RifEclipseOutputFileTools() { } +void getDayMonthYear(const ecl_kw_type* intehead_kw, int* day, int* month, int* year) +{ + assert(day && month && year); + + *day = ecl_kw_iget_int(intehead_kw, INTEHEAD_DAY_INDEX); + *month = ecl_kw_iget_int(intehead_kw, INTEHEAD_MONTH_INDEX); + *year = ecl_kw_iget_int(intehead_kw, INTEHEAD_YEAR_INDEX); +} + + //-------------------------------------------------------------------------------------------------- /// Get list of time step texts (dates) //-------------------------------------------------------------------------------------------------- @@ -94,9 +107,12 @@ void RifEclipseOutputFileTools::timeSteps(ecl_file_type* ecl_file, std::vector& timeSteps) {}; virtual size_t timeStepCount() = 0; virtual std::vector timeSteps() = 0; + virtual std::vector reportNumbers() = 0; virtual void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts) = 0; virtual bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values) = 0; diff --git a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp index 35da9d4316..cb6fc661fb 100644 --- a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp +++ b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.cpp @@ -258,3 +258,23 @@ int RifEclipseRestartFilesetAccess::readUnitsType() return RifEclipseOutputFileTools::readUnitsType(ecl_file); } +//-------------------------------------------------------------------------------------------------- +/// +//-------------------------------------------------------------------------------------------------- +std::vector RifEclipseRestartFilesetAccess::reportNumbers() +{ + std::vector reportNr; + + for (size_t i = 0; i < m_ecl_files.size(); i++) + { + const char* fileName = ecl_file_get_src_file(m_ecl_files[i]); + int reportNumber = ecl_util_filename_report_nr(fileName); + if (reportNumber != -1) + { + reportNr.push_back(reportNumber); + } + } + + return reportNr; +} + diff --git a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h index 36ccb3356f..97eabaed3e 100644 --- a/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h +++ b/ApplicationCode/FileInterface/RifEclipseRestartFilesetAccess.h @@ -44,6 +44,7 @@ class RifEclipseRestartFilesetAccess : public RifEclipseRestartDataAccess void setTimeSteps(const std::vector& timeSteps); size_t timeStepCount(); std::vector timeSteps(); + std::vector reportNumbers(); void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts); bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values); @@ -54,6 +55,7 @@ class RifEclipseRestartFilesetAccess : public RifEclipseRestartDataAccess private: void openTimeStep(size_t timeStep); + private: QStringList m_fileNames; std::vector m_timeSteps; diff --git a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp index 5ef395ed32..0dbf700e05 100644 --- a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp +++ b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.cpp @@ -21,6 +21,7 @@ #include "RifEclipseUnifiedRestartFileAccess.h" #include "RifEclipseOutputFileTools.h" +#include "ecl_kw_magic.h" #include #include #include @@ -175,3 +176,31 @@ int RifEclipseUnifiedRestartFileAccess::readUnitsType() return RifEclipseOutputFileTools::readUnitsType(m_ecl_file); } +//-------------------------------------------------------------------------------------------------- +/// +//-------------------------------------------------------------------------------------------------- +std::vector RifEclipseUnifiedRestartFileAccess::reportNumbers() +{ + std::vector reportNr; + + // Taken from well_info_add_UNRST_wells + + int num_blocks = ecl_file_get_num_named_kw(m_ecl_file, SEQNUM_KW); + int block_nr; + for (block_nr = 0; block_nr < num_blocks; block_nr++) { + ecl_file_push_block(m_ecl_file); // <------------------------------------------------------- + { // + ecl_file_subselect_block(m_ecl_file, SEQNUM_KW, block_nr); // Ensure that the status + { // is not changed as a side + const ecl_kw_type * seqnum_kw = ecl_file_iget_named_kw(m_ecl_file, SEQNUM_KW, 0); // effect. + int report_nr = ecl_kw_iget_int(seqnum_kw, 0); // + + reportNr.push_back(report_nr); + } // + } // + ecl_file_pop_block(m_ecl_file); // <------------------------------------------------------- + } + + return reportNr; +} + diff --git a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h index 26e7824959..f119c75701 100644 --- a/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h +++ b/ApplicationCode/FileInterface/RifEclipseUnifiedRestartFileAccess.h @@ -45,6 +45,7 @@ class RifEclipseUnifiedRestartFileAccess : public RifEclipseRestartDataAccess size_t timeStepCount(); std::vector timeSteps(); + std::vector reportNumbers(); void resultNames(QStringList* resultNames, std::vector* resultDataItemCounts); bool results(const QString& resultName, size_t timeStep, size_t gridCount, std::vector* values); @@ -55,6 +56,7 @@ class RifEclipseUnifiedRestartFileAccess : public RifEclipseRestartDataAccess private: bool openFile(); + private: QString m_filename; ecl_file_type* m_ecl_file; diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp index 0ddc72b675..0861b22bd3 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp @@ -1066,6 +1066,14 @@ void RifReaderEclipseOutput::readWellCells(const ecl_grid_type* mainEclGrid, boo m_dynamicResultsAccess->readWellData(ert_well_info, importCompleteMswData); + std::vector timeSteps = m_dynamicResultsAccess->timeSteps(); + std::vector reportNumbers = m_dynamicResultsAccess->reportNumbers(); + bool sameCount = false; + if (timeSteps.size() == reportNumbers.size()) + { + sameCount = true; + } + RigMainGrid* mainGrid = m_eclipseCase->mainGrid(); std::vector grids; m_eclipseCase->allGrids(&grids); @@ -1095,8 +1103,27 @@ void RifReaderEclipseOutput::readWellCells(const ecl_grid_type* mainEclGrid, boo RigWellResultFrame& wellResFrame = wellResults->m_wellCellsTimeSteps[timeIdx]; // Build timestamp for well - // Also see RifEclipseOutputFileAccess::timeStepsText for accessing time_t structures + bool haveFoundTimeStamp = false; + + if (sameCount) { + int reportNr = well_state_get_report_nr(ert_well_state); + + for (size_t i = 0; i < reportNumbers.size(); i++) + { + if (reportNumbers[i] == reportNr) + { + wellResFrame.m_timestamp = timeSteps[i]; + haveFoundTimeStamp = true; + } + } + } + + if (!haveFoundTimeStamp) + { + // This fallback will not work for timesteps before 1970. + + // Also see RifEclipseOutputFileAccess::timeStepsText for accessing time_t structures time_t stepTime = well_state_get_sim_time(ert_well_state); wellResFrame.m_timestamp = QDateTime::fromTime_t(stepTime); } From f2c75c7f5902fca8c58a6f0ec154dabaf856780e Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Wed, 5 Nov 2014 17:23:07 +0100 Subject: [PATCH 19/21] Updated ERT to bbab02e02630924471760a7e9357825ad414e2e9 Integrated fix for MSW reading of large wells --- .../Ert/devel/libecl/applications/esummary.c | 2 + ThirdParty/Ert/devel/libecl/src/fortio.c | 2 +- .../Ert/devel/libplot/src/plplot_driver.c | 2 +- .../devel/python/python/ert/ecl/ecl_sum.py | 29 +++++++------ .../devel/python/python/ert/well/well_info.py | 4 ++ .../python/python/ert/well/well_segment.py | 3 ++ .../python/python/ert/well/well_state.py | 24 ++++++++++- .../python/python/ert/well/well_time_line.py | 5 ++- .../Ert/devel/python/test/CMakeLists.txt | 12 ++++++ .../python/test/ert_tests/ecl/test_ecl_sum.py | 43 +++++++++++++++++++ .../test/ert_tests/well/test_ecl_well2.py | 43 +++++++++++++++++++ 11 files changed, 152 insertions(+), 17 deletions(-) create mode 100644 ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum.py create mode 100644 ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well2.py diff --git a/ThirdParty/Ert/devel/libecl/applications/esummary.c b/ThirdParty/Ert/devel/libecl/applications/esummary.c index 245123f780..98fcbb9ed0 100644 --- a/ThirdParty/Ert/devel/libecl/applications/esummary.c +++ b/ThirdParty/Ert/devel/libecl/applications/esummary.c @@ -84,7 +84,9 @@ int main(int argc , char ** argv) { time = time_union; else time = time_intersect; + vector_append_owned_ref( ecl_sum_list , ecl_sum , ecl_sum_free__ ); + load_count++; } else { const time_interval_type * ti = ecl_sum_get_sim_time( ecl_sum ); if (time_interval_has_overlap(time , ti)) { diff --git a/ThirdParty/Ert/devel/libecl/src/fortio.c b/ThirdParty/Ert/devel/libecl/src/fortio.c index 48dcfb0d6b..68dcdef697 100644 --- a/ThirdParty/Ert/devel/libecl/src/fortio.c +++ b/ThirdParty/Ert/devel/libecl/src/fortio.c @@ -494,7 +494,7 @@ void fortio_data_fseek(fortio_type* fortio, offset_type data_offset, size_t data int block_index = data_element / block_size; int headers = (block_index + 1) * 4; int trailers = block_index * 4; - int bytes_to_skip = data_offset + headers + trailers + (data_element * element_size); + offset_type bytes_to_skip = data_offset + headers + trailers + (data_element * element_size); fortio_fseek(fortio, bytes_to_skip, SEEK_SET); } diff --git a/ThirdParty/Ert/devel/libplot/src/plplot_driver.c b/ThirdParty/Ert/devel/libplot/src/plplot_driver.c index d37a8b5771..a4bab757ec 100644 --- a/ThirdParty/Ert/devel/libplot/src/plplot_driver.c +++ b/ThirdParty/Ert/devel/libplot/src/plplot_driver.c @@ -207,7 +207,7 @@ static void plplot_set_axis(plot_driver_type * driver , const plot_range_type * static void plplot_setup_linestyle( line_attribute_type line_attr ) { pllsty(line_attr.line_style); /* Setting solid/dashed/... */ - plwid(line_attr.line_width * PLOT_DEFAULT_LINE_WIDTH); /* Setting line width.*/ + plwidth(line_attr.line_width * PLOT_DEFAULT_LINE_WIDTH); /* Setting line width.*/ plcol0(line_attr.line_color); /* Setting line color. */ } diff --git a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py index a74d379b8d..7fa1178d3e 100644 --- a/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py +++ b/ThirdParty/Ert/devel/python/python/ert/ecl/ecl_sum.py @@ -394,7 +394,7 @@ def get_interp( self , key , days = None , date = None): raise ValueError("Must supply either days or date") - def timeRange(self , start = None , end = None , interval = "1Y"): + def timeRange(self , start = None , end = None , interval = "1Y", extend_end = True): (num , timeUnit) = TimeVector.parseTimeUnit( interval ) if start is None: @@ -418,26 +418,31 @@ def timeRange(self , start = None , end = None , interval = "1Y"): month2 = end.month day1 = start.day day2 = end.day - - if timeUnit == 'm': - if day2 > 1: - month2 += 1 - if month2 == 13: + if extend_end: + if timeUnit == 'm': + if day2 > 1: + month2 += 1 + if month2 == 13: + year2 += 1 + month2 = 1 + elif timeUnit == "y": + month1 = 1 + if year2 > 1 or day2 > 1: year2 += 1 month2 = 1 - elif timeUnit == "y": - month1 = 1 - if year2 > 1 or day2 > 1: - year2 += 1 - month2 = 1 day1 = 1 day2 = 1 + start = datetime.date( year1, month1 , day1) end = datetime.date(year2 , month2 , day2) trange = TimeVector.createRegular(start , end , interval) if trange[-1] < end: - trange.appendTime( num , timeUnit ) + if extend_end: + trange.appendTime( num , timeUnit ) + else: + trange.append( end ) + return trange diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py index 937b142f67..61e4fdcba1 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_info.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_info.py @@ -76,6 +76,10 @@ def addWellFile(self, rst_file, load_segment_information): raise TypeError("Expected the RST file to be a filename or an EclFile instance.") + def hasWell(self , well_name): + return well_name in self + + def free(self): WellInfo.cNamespace().free(self) diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py b/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py index 21a38758b4..07fd72f525 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_segment.py @@ -9,6 +9,9 @@ def __init__(self): def free(self): pass + def __str__(self): + return "{Segment ID:%d BranchID:%d Length:%g}" % (self.id() , self.branchId() , self.length()) + def id(self): """ @rtype: int """ return WellSegment.cNamespace().id(self) diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py index 694fbd79c4..5c0ceaa733 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_state.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_state.py @@ -52,18 +52,38 @@ def globalConnections(self): return values + def numSegments(self): + """ @rtype: int """ + segment_collection = WellState.cNamespace().get_segment_collection(self) + count = WellState.cNamespace().segment_collection_size(segment_collection) + return count + + def segments(self): """ @rtype: list of WellSegment """ segment_collection = WellState.cNamespace().get_segment_collection(self) - count = WellState.cNamespace().segment_collection_size(segment_collection) values = [] - for index in range(count): + for index in range(self.numSegments()): value = WellState.cNamespace().segment_collection_iget(segment_collection, index).setParent(self) values.append(value) return values + + def igetSegment(self , segment_index): + """ @rtype: WellSegment """ + if segment_index < 0: + segment_index += len(self) + + if not 0 <= segment_index < self.numSegments(): + raise IndexError("Invalid index:%d - valid range [0,%d)" % (index , len(self))) + + segment_collection = WellState.cNamespace().get_segment_collection(self) + return WellState.cNamespace().segment_collection_iget(segment_collection, segment_index).setParent(self) + + + # def branches(self): # """ @rtype: BranchCollection """ diff --git a/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py b/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py index 22ec7f1cf3..05c57e7235 100644 --- a/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py +++ b/ThirdParty/Ert/devel/python/python/ert/well/well_time_line.py @@ -18,6 +18,9 @@ def __getitem__(self, index): @rtype: WellState """ + if index < 0: + index += len(self) + if not 0 <= index < len(self): raise IndexError("Index must be in range 0 <= %d < %d" % (index, len(self))) @@ -32,4 +35,4 @@ def free(self): WellTimeLine.cNamespace().size = cwrapper.prototype("int well_ts_get_size(well_time_line)") -WellTimeLine.cNamespace().iget = cwrapper.prototype("well_state_ref well_ts_iget_state(well_time_line, int)") \ No newline at end of file +WellTimeLine.cNamespace().iget = cwrapper.prototype("well_state_ref well_ts_iget_state(well_time_line, int)") diff --git a/ThirdParty/Ert/devel/python/test/CMakeLists.txt b/ThirdParty/Ert/devel/python/test/CMakeLists.txt index 00607d9c16..9b21ce7155 100644 --- a/ThirdParty/Ert/devel/python/test/CMakeLists.txt +++ b/ThirdParty/Ert/devel/python/test/CMakeLists.txt @@ -127,6 +127,7 @@ set(TEST_SOURCES ert_tests/server/test_socket.py ert_tests/well/test_ecl_well.py + ert_tests/well/test_ecl_well2.py ecl_isosurf.py ens_config_test.py @@ -445,6 +446,10 @@ add_test( NAME python.tests.ert.ecl.ecl_sum_vector WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_ecl_sum_vector.EclSumVectorTest) +add_test( NAME python.tests.ert.ecl.ecl_sum_time_range + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_ecl_sum.EclSumTest) + add_test( NAME python.tests.ert.ecl.layer WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.ecl.test_layer.LayerTest ) @@ -601,6 +606,11 @@ add_test( NAME python.tests.ert.well.ecl_well COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.well.test_ecl_well.EclWellTest) +add_test( NAME python.tests.ert.well.ecl_well2 + WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} + COMMAND ctest_run.py ${PROJECT_BINARY_DIR}/${PYTHON_INSTALL_PREFIX} ert_tests.well.test_ecl_well2.EclWellTest2) + + set_property( TEST python.tests.ert.sched.sched PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.fortio PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.ecl.ecl_grdecl PROPERTY LABELS Python:StatoilData ) @@ -618,6 +628,7 @@ set_property( TEST python.tests.ert.ecl.ecl_grid PROPERTY LABELS Python set_property( TEST python.tests.ert.ecl.ecl_deprecation PROPERTY LABELS Python ) #set_property( TEST python.tests.import_local PROPERTY LABELS Python:StatoilBuild ) set_property( TEST python.tests.ert.well.ecl_well PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.well.ecl_well2 PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.test_run PROPERTY LABELS Python) set_property( TEST python.tests.ert.import PROPERTY LABELS Python) @@ -639,6 +650,7 @@ set_property( TEST python.tests.ert.enkf.ert_test_context PROPERTY LABELS Py set_property( TEST python.tests.ert.enkf.plot.plot_block_data PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.enkf.data.gen_data_config PROPERTY LABELS Python:StatoilData ) set_property( TEST python.tests.ert.enkf.data.gen_data PROPERTY LABELS Python:StatoilData ) +set_property( TEST python.tests.ert.ecl.ecl_sum_time_range PROPERTY LABELS Python:StatoilData ) if (ERT_BUILD_GUI) set_property( TEST python.tests.ert_gui.import PROPERTY ENVIRONMENT "ERT_SHARE_PATH=${PROJECT_SOURCE_PATH}/share") diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum.py b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum.py new file mode 100644 index 0000000000..65ed92a699 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/ecl/test_ecl_sum.py @@ -0,0 +1,43 @@ +# !/usr/bin/env python +# Copyright (C) 2014 Statoil ASA, Norway. +# +# The file 'test_ecl_sum.py' is part of ERT - Ensemble based Reservoir Tool. +# +# ERT is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# ERT is distributed in the hope that it will be useful, but WITHOUT ANY +# WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. +# +# See the GNU General Public License at +# for more details. +from ert.ecl import EclSum +from ert.test import ExtendedTestCase + +try: + from unittest2 import skipIf +except ImportError: + from unittest import skipIf + +class EclSumTest(ExtendedTestCase): + def setUp(self): + self.test_file = self.createTestPath("Statoil/ECLIPSE/Gurbat/ECLIPSE.SMSPEC") + self.ecl_sum = EclSum(self.test_file) + + def test_time_range_year(self): + real_range = self.ecl_sum.timeRange(interval="1y", extend_end = False) + extended_range = self.ecl_sum.timeRange(interval="1y", extend_end = True) + assert real_range[-1] < extended_range[-1] + + def test_time_range_day(self): + real_range = self.ecl_sum.timeRange(interval = "1d", extend_end = False) + extended_range = self.ecl_sum.timeRange(interval = "1d", extend_end = True) + assert real_range[-1] == extended_range[-1] + + def test_time_range_month(self): + real_range = self.ecl_sum.timeRange(interval = "1m", extend_end = False) + extended_range = self.ecl_sum.timeRange(interval = "1m", extend_end = True) + assert real_range[-1] < extended_range[-1] \ No newline at end of file diff --git a/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well2.py b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well2.py new file mode 100644 index 0000000000..07a78629f7 --- /dev/null +++ b/ThirdParty/Ert/devel/python/test/ert_tests/well/test_ecl_well2.py @@ -0,0 +1,43 @@ +import datetime +import os.path + +from ert.ecl import EclGrid, EclFile, EclFileFlagEnum +from ert.test import ExtendedTestCase +from ert.util.ctime import CTime +from ert.well import WellInfo, WellConnection, WellTypeEnum, WellConnectionDirectionEnum, WellSegment + + + +class EclWellTest2(ExtendedTestCase): + grid = None + + + def getGrid(self): + if EclWellTest2.grid is None: + EclWellTest2.grid = EclGrid( self.createTestPath("Statoil/ECLIPSE/Troll/Ref2014/T07-4A-W2014-06.EGRID")) + + return EclWellTest2.grid + + + def checkWell(self , rst_file): + segment_length = [2660 , 20 , 121 , 1347.916 , 20.585 , 56.249 , 115.503 , 106.978 , 47.124 , 279.529, + 128.534 , 165.33 , 59.97 , 936.719 ] + + well_info = WellInfo( self.getGrid() , self.createTestPath( os.path.join("Statoil/ECLIPSE/Troll/Ref2014" , rst_file ))) + well_time_line = well_info["F4BYH"] + for well_state in well_time_line: + self.assertTrue( well_state.isMultiSegmentWell() ) + self.assertTrue( well_state.hasSegmentData() ) + + for index,length in enumerate(segment_length): + segment = well_state.igetSegment(index) + self.assertFloatEqual( segment.length() , length ) + + + + + def testWell(self): + self.checkWell("T07-4A-W2014-06.X0695") + self.checkWell("T07-4A-W2014-06.X0709") + self.checkWell("T07-4A-W2014-06.UNRST") + From 0dcba178fdbaf6b119e45156b92f772829742007 Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Thu, 6 Nov 2014 09:35:39 +0100 Subject: [PATCH 20/21] Do not show NNC text at all in progress bar when NNC import is disabled --- .../FileInterface/RifReaderEclipseOutput.cpp | 22 ++++++++++--------- 1 file changed, 12 insertions(+), 10 deletions(-) diff --git a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp index 0861b22bd3..18f7aabff0 100644 --- a/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp +++ b/ApplicationCode/FileInterface/RifReaderEclipseOutput.cpp @@ -435,26 +435,28 @@ bool RifReaderEclipseOutput::open(const QString& fileName, RigCaseData* eclipseC buildMetaData(); progInfo.incrementProgress(); - progInfo.setProgressDescription("Reading NNC data"); - progInfo.setNextProgressIncrement(5); if (isNNCsEnabled()) { + progInfo.setProgressDescription("Reading NNC data"); + progInfo.setNextProgressIncrement(5); transferNNCData(mainEclGrid, m_ecl_init_file, eclipseCase->mainGrid()); - } - progInfo.incrementProgress(); + progInfo.incrementProgress(); - progInfo.setProgressDescription("Processing NNC data"); - progInfo.setNextProgressIncrement(20); - if (isNNCsEnabled()) - { + progInfo.setProgressDescription("Processing NNC data"); + progInfo.setNextProgressIncrement(20); eclipseCase->mainGrid()->nncData()->processConnections( *(eclipseCase->mainGrid())); + progInfo.incrementProgress(); + } + else + { + progInfo.setNextProgressIncrement(25); + progInfo.incrementProgress(); } - progInfo.incrementProgress(); progInfo.setNextProgressIncrement(8); progInfo.setProgressDescription("Reading Well information"); - readWellCells(mainEclGrid, isImportOfCompleteMswDataEnabled()); + progInfo.incrementProgress(); progInfo.setProgressDescription("Releasing reader memory"); ecl_grid_free( mainEclGrid ); From 0f88443f2ff78e0a1d4ca807acd51a55d3fa7ddc Mon Sep 17 00:00:00 2001 From: Magne Sjaastad Date: Fri, 7 Nov 2014 17:55:13 +0100 Subject: [PATCH 21/21] Updated to 1.3.1 --- ResInsightVersion.cmake | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ResInsightVersion.cmake b/ResInsightVersion.cmake index f611c67f07..a39a40aef0 100644 --- a/ResInsightVersion.cmake +++ b/ResInsightVersion.cmake @@ -2,7 +2,7 @@ set(CMAKE_MAJOR_VERSION 1) set(CMAKE_MINOR_VERSION 3) set(CMAKE_PATCH_VERSION 1) -set(DEV_VERSION "-dev") +set(DEV_VERSION "") set(PRODUCTVER ${CMAKE_MAJOR_VERSION},${CMAKE_MINOR_VERSION},0,${CMAKE_PATCH_VERSION}) set(STRPRODUCTVER ${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}.${CMAKE_PATCH_VERSION}${DEV_VERSION})