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+\providecommand{\bibinfo}[2]{#2} +\providecommand{\BIBentrySTDinterwordspacing}{\spaceskip=0pt\relax} +\providecommand{\BIBentryALTinterwordstretchfactor}{4} +\providecommand{\BIBentryALTinterwordspacing}{\spaceskip=\fontdimen2\font plus +\BIBentryALTinterwordstretchfactor\fontdimen3\font minus + \fontdimen4\font\relax} +\providecommand{\BIBforeignlanguage}[2]{{% +\expandafter\ifx\csname l@#1\endcsname\relax +\typeout{** WARNING: IEEEtran.bst: No hyphenation pattern has been}% +\typeout{** loaded for the language `#1'. Using the pattern for}% +\typeout{** the default language instead.}% +\else +\language=\csname l@#1\endcsname +\fi +#2}} +\providecommand{\BIBdecl}{\relax} +\BIBdecl + +\bibitem{web:USGS:eDNA} +\BIBentryALTinterwordspacing +USGS, ``Environmental dna (edna),'' last accessed 29 December 2023. [Online]. + Available: + \url{https://www.usgs.gov/special-topics/water-science-school/science/environmental-dna-edna#overview} +\BIBentrySTDinterwordspacing + +\bibitem{web:NOAA:eDNA} +\BIBentryALTinterwordspacing +NOAA, ``Environmental dna (edna),'' last accessed 29 December 2023. [Online]. + Available: \url{https://oceanexplorer.noaa.gov/technology/edna/edna.html} +\BIBentrySTDinterwordspacing + +\bibitem{art:Taal} +B.~E.~P. et~al, ``Better boundaries: Identifying the upper extent of fish + distributions in forested streams using edna and electrofishing,'' + \emph{Ecosphere}, vol.~12, 2021. + +\bibitem{web:smithroot} +\BIBentryALTinterwordspacing +Smith-Root, ``Backpack and handheld edna sampler,'' last accessed 29 December + 2023. [Online]. Available: \url{https://www.smith-root.com/edna/edna-sampler} +\BIBentrySTDinterwordspacing + +\bibitem{art:DOT} +A.~H. et~al, ``Compact and automated edna sampler for in situ monitoring of + marine environments,'' \emph{Scientific Reports}, vol.~13, 2023. + +\bibitem{art:Battery} +U.~Prasad, J.~Prakash, V.~Kamavaram, G.~Arumugam, and A.~N. Kannan, ``Failure + analysis of lead-acid batteries at extreme operating temperatures,'' vol.~12, + 2023. + +\end{thebibliography} diff --git a/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.blg b/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.blg new file mode 100644 index 0000000..691f7ab --- /dev/null +++ b/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.blg @@ -0,0 +1,60 @@ +This is BibTeX, Version 0.99d +Capacity: max_strings=200000, hash_size=200000, hash_prime=170003 +The top-level auxiliary file: PolyWAG_HardwareX.aux +Reallocating 'name_of_file' (item size: 1) to 5 items. +Reallocating 'name_of_file' (item size: 1) to 9 items. +The style file: IEEEtran.bst +Reallocating 'singl_function' (item size: 4) to 100 items. +Reallocating 'singl_function' (item size: 4) to 100 items. +Reallocating 'singl_function' (item size: 4) to 100 items. +Reallocating 'wiz_functions' (item size: 4) to 6000 items. +Reallocating 'singl_function' (item size: 4) to 100 items. +Database file #1: refs.bib +-- IEEEtran.bst version 1.14 (2015/08/26) by Michael Shell. +-- http://www.michaelshell.org/tex/ieeetran/bibtex/ +-- See the "IEEEtran_bst_HOWTO.pdf" manual for usage information. +Warning--empty journal in art:Battery + +Done. +You've used 6 entries, + 4087 wiz_defined-function locations, + 853 strings with 8149 characters, +and the built_in function-call counts, 2532 in all, are: += -- 194 +> -- 41 +< -- 3 ++ -- 20 +- -- 10 +* -- 119 +:= -- 479 +add.period$ -- 12 +call.type$ -- 6 +change.case$ -- 9 +chr.to.int$ -- 0 +cite$ -- 7 +duplicate$ -- 210 +empty$ -- 221 +format.name$ -- 11 +if$ -- 534 +int.to.chr$ -- 0 +int.to.str$ -- 6 +missing$ -- 46 +newline$ -- 47 +num.names$ -- 6 +pop$ -- 123 +preamble$ -- 1 +purify$ -- 0 +quote$ -- 2 +skip$ -- 187 +stack$ -- 0 +substring$ -- 12 +swap$ -- 120 +text.length$ -- 3 +text.prefix$ -- 0 +top$ -- 5 +type$ -- 6 +warning$ -- 1 +while$ -- 6 +width$ -- 7 +write$ -- 78 +(There was 1 warning) diff --git a/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.log b/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.log new file mode 100644 index 0000000..2bffc89 --- /dev/null +++ b/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.log @@ -0,0 +1,781 @@ +This is pdfTeX, Version 3.141592653-2.6-1.40.25 (MiKTeX 24.1) (preloaded format=pdflatex 2024.2.20) 20 FEB 2024 14:34 +entering extended mode + restricted \write18 enabled. + %&-line parsing enabled. +**./PolyWAG_HardwareX.tex +(PolyWAG_HardwareX.tex +LaTeX2e <2023-11-01> patch level 1 +L3 programming layer <2024-02-13> +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/latex/base\article.cls +Document Class: article 2023/05/17 v1.4n Standard LaTeX document class +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/latex/base\size11.clo +File: size11.clo 2023/05/17 v1.4n Standard LaTeX file (size option) +) +\c@part=\count188 +\c@section=\count189 +\c@subsection=\count190 +\c@subsubsection=\count191 +\c@paragraph=\count192 +\c@subparagraph=\count193 +\c@figure=\count194 +\c@table=\count195 +\abovecaptionskip=\skip48 +\belowcaptionskip=\skip49 +\bibindent=\dimen140 +) +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/latex/base\inputenc.sty +Package: inputenc 2021/02/14 v1.3d Input encoding file +\inpenc@prehook=\toks17 +\inpenc@posthook=\toks18 +) +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/latex/geometry\geometry.sty +Package: geometry 2020/01/02 v5.9 Page Geometry + +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/latex/graphics\keyval.sty +Package: keyval 2022/05/29 v1.15 key=value parser (DPC) +\KV@toks@=\toks19 +) +(C:\Users\marc\AppData\Local\Programs\MiKTeX\tex/generic/iftex\ifvtex.sty +Package: ifvtex 2019/10/25 v1.7 ifvtex legacy package. 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Papers/HardwareX/LaTeX/PolyWAG_HardwareX.tex index 5213eab..30a1b1f 100644 --- a/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.tex +++ b/Documentation and Papers/HardwareX/LaTeX/PolyWAG_HardwareX.tex @@ -83,7 +83,7 @@ \textbf{Corresponding author’s email address and Twitter handle}\\ Kai Roy - kaikurisakaroy\@gmail.com \\ Riley Prince - princeri@oregonstate.edu \\ -Marc Belinga - \\ +Marc Belinga - belingam@oregonstate.edu \\ John Selker - john.selker@oregonstate.edu \\ Chet Udell - udellc@oregonstate.edu @@ -744,9 +744,8 @@ \section{Conclusion} % Reiterate Benefits % Mention -The PolyWAG Sampler shows a lot of promise when it comes to eDNA Sampling applications. This combined with the low cost of \$3800 for the materials makes the PolyWAG a potentially alternative to existing eDNA Samplers. Though the cross-contamination tests need to be redone to fully verify the sampler, even the existing results show a lot of promise. -\newline\par\noindent -There are other improvements that can be made to the PolyWAG system outside of redoing some of the validation tests. This include new or improved features such as an increased the max sample volume and turbidity capability, Automatic Calibration for Water Viscosity based on Temperature, as well as upgrading certain components to raise the specifications of the sampler, such as the flow meter, solenoid valves, and battery. + +In our paper, we introduced the PolyWAG eDNA sampler, an automated solution for collecting environmental DNA from aquatic environments. This system addresses the limitations of current eDNA sampling techniques, which are often labor intensive, costly, or limited in capability. Despite its advantages, we acknowledge areas for improvement to enhance its performance further. Our recommendations focus on increasing the sampler's capacity to handle larger volumes and higher turbidity, integrating an automatic calibration for water viscosity adjustments based on temperature changes, and employing more robust components such as stronger pumps and high-pressure rated solenoid valves. Additionally, we propose enhancements like a closed-loop bleach cleaning system for reducing cross-contamination, a pulse damper for pressure stabilization, and improved flow meter accuracy through noise filtering and firmware adjustments. These modifications aim to make the PolyWAG sampler even more effective and reliable for diverse field conditions, paving the way for its broader application in environmental DNA research and monitoring. \par\noindent\newline