From b5766a2918d3707f70f7d677b4120a8ee2387ce0 Mon Sep 17 00:00:00 2001 From: Erica Voss Date: Wed, 10 Aug 2016 15:40:15 -0400 Subject: [PATCH] Related to issue #87. Noticed that the Vocabulary has deprecated relationships now when using MeSH --> RxNorm. Removed deprecated relationships. --- LAERTES/terminology-mappings/RxNorm-to-MeSH/README | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/LAERTES/terminology-mappings/RxNorm-to-MeSH/README b/LAERTES/terminology-mappings/RxNorm-to-MeSH/README index d739ddf..fe82de4 100644 --- a/LAERTES/terminology-mappings/RxNorm-to-MeSH/README +++ b/LAERTES/terminology-mappings/RxNorm-to-MeSH/README @@ -10,7 +10,8 @@ WHERE A.VOCABULARY_ID = 'MeSH' AND CR.CONCEPT_ID_2 = A.CONCEPT_ID AND B.CONCEPT_ID = CR.CONCEPT_ID_1 AND B.VOCABULARY_ID = 'RxNorm' AND - CR.RELATIONSHIP_ID = 'Mapped from') + CR.RELATIONSHIP_ID = 'Mapped from' AND + CR.INVALID_REASON IS NULL) TO '/tmp/mesh-to-rxnorm-standard-vocab-v5.csv' DELIMITER '|' CSV HEADER The format is as follows: