- initial commit of
fpr_photo_qa2
that should catch all reserve photo name duplicates as per #61 - add 4 photo tags to
fpr_photo_rename
- use
fs::dir_create
infpr_photo_folders
include.dirs = FALSE
andrecursive = FALSE
withinfpr_photo_paths_to_copy
so we don't snag out on sub-directories. Don't think it will be a problem as we just look one level within directories anyway.
- make rayshader, elevatr and fasstr suggests to the functions they are used in, adding checks within the function sto tell the user to install it if they don't have and remove from depends in Description as per #7
fpr_my_fish_sp
now processes species codes passed strings seperated by commas or semi colons since newbcfishpass.crossing.vw
outputs use semi-colons vs the past convention of commas. Thanks @lucy-schick ! closes #89- reorder
kableExtra
calls infpr_table_bcfp_html
so thatkableExtra::add_footnote
is called afterkableExtra::kable_styling
to close #87. Remove redundant call tofpr_kable
) infpr_table_bcfp_html
- remove all_spawning_rearing_* columns from fpr_xref_crossings picklist so can build fpr_table_bcfp_html close #88
- remove
poisutils
dependency as per #83 fpr_sp_assign_utm
alerts user if the default values for col_easting and col_northing are not present in the dat sf object as per #85fpr_my_bcfishpass
move from{{}}
for param columns toensym
and!!
to provide flexibility fordat
param objects other thanbcfishpass
- close #86fpr_photo_amalg_cv
- close #46- close #75 and #76 by using
fpr_kable
infpr_table_cv_summary_memo
- add fpr_xref_crossings as per https://github.com/NewGraphEnvironment/fish_passage_template_reporting/issues/1
- add pass through
...
tofpr_kable
to allow for more flexibility - Update
fpr_kable
to deal with duplicated Table captions as per #68 - Update fpr_photo_amalg_cv to include full calls to functions, importFrom and move to stand alone script. replace calls to %like% with str_detect. add to photo family
- Added fpr_dbq_clip which clips a point layer by a polygon layer.
- Added fpr_create_hydrograph which creates hydrographs of flow data for a given station
- change name of
fpr_t_site_id
tofpr_tidy_assign_site_id
to clarify use and avoid future conflicts if/when fpr_test_* functions are introduced - in
fpr_sp_gpkg_backup
split out write_backup params into write_csv and write_rdata to provide more flexibility. change to new name for fpr_tidy_assign_site_id
- add
fpr_sp_gpkg_backup
- add
fpr_t_site_id
- add
fpr_sp_assign_sf_from_utm
- add
fpr_make_xref_pscis_modelled
- add
fpr_dbq_lstable
- add
fpr_dbq_subset
- add
fpr_db_query
- add
fpr_db_conn
- add
fpr_sp_utm_assign
- close #34
- add
fpr_photo_qa_missing_all
- add
fpr_photo_qa_df
- add
fpr_remove_dupes
to close #42 - add
fpr_photo_rename
- add
fpr_photo_resize_batch
- fix #29
- fix #26
- change names of
- fpr_table_barrier_result
- fpr_table_barrier_scoring
- fpr_table_habvalue
- fix bug where
fpr_my_habitat_paragraph
was putting commas between sentences
- fix #17 in
my_channel_sentence
so we actually specify the site (vs defaut my_site) in themy_habitat_info
request for the average gradient
- v.20221221
- BREAKING CHANGE.
fpr_import_hab_con
now requiresrow_empty_remove = T
(pushes through tofpr_sheet_trim
) in order to correctly choose the first complete row of the template speadsheets to be the column names. Reason is thatfpr_import_pscis
now explicitly drops the first 3 rows on import in order to call column types fromfpr_xref_pscis
before the call tofpr_sheet_trim
. fpr_xref_pscis
built fromxref_names_pscis
with column types appended. Better way to do this may be found at https://stackoverflow.com/questions/24067782/assign-data-types-to-each-column-of-a-data-frame-in-r as it allows fpr_impfpr_tab_habvalue
- Add param for directory in
fpr_import_pscis
to allow more flexibility - cmd badge addition
- add objects
- fpr_tab_barrier_result
- fpr_tab_barrier_scoring
- fpr_tab_habvalue
- fpr_xref_fix
- fpr_xref_obstacles
- fpr_xref_pscis
- add
fpr_make_geopackage()
- add backup switch for
fpr_import_pscis_all
- add
fpr_data_tab_habvalue
data object
fpr_table_bcfp()
now includesfpr_kable
with cookie cutter caption and footnotes. Should move caption and footnotes to params for more flexibility.- Tweaked individual photo in
fpr_phtot_amalg_cv()
from "x420"" to "560x420!" to deal with photos that start out as wrong size - add
fpr_plot_fish_box()
- add
fpr_table_fish_density()
- add
fpr_table_fish_site()
- tweak photo params in
fpr_photo_amalg_cv()
so originals are resized fpr_sheet_trim()
(helper) now has an option to remove all rows without an input in the second (or any) column.- ignore more species in
fpr_my_fish_sp()
by default - tweaks to
fpr_my_channel_sentence()
- change page break hack
fpr_table_cv_summary_memo()
so that it works with pagedown
fpr_import_hab_con()
now creates directorydata/backup
and backs up all sheets in csv format (#1)fpr_sheet_trim()
(helper) now removes all rows without an input into the first column.