Dockerfile_dev

FROM metacell/jupyter-neuron:latest
USER $NB_USER

ARG netpyneuiBranch=development 
ENV netpyneuiBranch=${netpyneuiBranch}  
RUN echo "$netpyneuiBranch";

# Clone NetPyNE-UI and install the development version
RUN wget https://github.com/MetaCell/NetPyNE-UI/archive/$netpyneuiBranch.zip -q
RUN unzip $netpyneuiBranch.zip
WORKDIR /home/jovyan/work/NetPyNE-UI-$netpyneuiBranch/utilities
RUN /bin/bash -c "source activate snakes && python --version"
RUN /bin/bash -c "source activate snakes && exec python install.py branch $netpyneuiBranch"
WORKDIR /home/jovyan
RUN git clone https://github.com/Neurosim-lab/netpyne_workspace
WORKDIR /home/jovyan/netpyne_workspace
RUN ln -sfn /home/jovyan/work/NetPyNE-UI-$netpyneuiBranch/netpyne_ui/tests tests
CMD /bin/bash -c "source activate snakes && exec jupyter notebook --debug --NotebookApp.default_url=/geppetto --NotebookApp.token='' --library=netpyne_ui"