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Update GHA config

Update GHA config #218

Workflow file for this run

name: main
on:
push:
branches-ignore:
- "dependabot/**"
pull_request:
paths-ignore:
- '**.md'
env:
PIP_DISABLE_PIP_VERSION_CHECK: 1
concurrency:
group: ${{ github.head_ref || github.run_id }}
cancel-in-progress: true
jobs:
test:
name: test
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Install apt dependencies
run: |
sudo apt-get update -y --allow-releaseinfo-change
sudo apt-get install --no-install-recommends -y libegl1-mesa
- uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
miniforge-variant: Mambaforge
environment-file: environment.yml
auto-update-conda: false
python-version: "3.9"
- name: "Install Test Framework"
run: pip install pytest
- name: "Install Codem"
run: pip install .
- name: 'Debug Info'
run: |
echo python location: `which python`
echo python version: `python --version`
echo pytest location: `which pytest`
echo installed packages
conda list
pip list
- name: "Run Tests"
run: pytest tests -v
lint:
name: lint-check
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
with:
# We must fetch at least the immediate parents so that if this is
# a pull request then we can checkout the head.
fetch-depth: 2
- name: Setup Python
uses: actions/setup-python@v5
with:
# Semantic version range syntax or exact version of a Python version
python-version: '3.12'
- name: Install Linting Tools
run : |
python -m pip install mypy numpy types-PyYAML typing-extensions
- name: Run mypy
run : mypy src
analyze:
name: analyze
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
with:
# We must fetch at least the immediate parents so that if this is
# a pull request then we can checkout the head.
fetch-depth: 2
- uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
miniforge-variant: Mambaforge
environment-file: environment.yml
auto-update-conda: false
python-version: "3.9"
# Initializes the CodeQL tools for scanning.
- name: Initialize CodeQL
uses: github/codeql-action/init@v3
with:
languages: 'python'
# Supported options are ['csharp', 'cpp', 'go', 'java', 'javascript', 'python']
# If you wish to specify custom queries, you can do so here or in a config file.
# By default, queries listed here will override any specified in a config file.
# Prefix the list here with "+" to use these queries and those in the config file.
queries: +security-and-quality
setup-python-dependencies: false
# Autobuild attempts to build any compiled languages (C/C++, C#, or Java).
# If this step fails, then you should remove it and run the build manually (see below)
- name: Autobuild
uses: github/codeql-action/autobuild@v3
# ℹ️ Command-line programs to run using the OS shell.
# 📚 https://git.io/JvXDl
# ✏️ If the Autobuild fails above, remove it and uncomment the following three lines
# and modify them (or add more) to build your code if your project
# uses a compiled language
#- run: |
# make bootstrap
# make release
- name: Perform CodeQL Analysis
uses: github/codeql-action/analyze@v3