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1. orthogonalize-polygon orthogonalize-polygon Public

   Orthogonalize polygon in python by making all its angles 90 or 180 deg

   Python 25 4

2. detect-mutations detect-mutations Public

   Python script for detecting mutations in aligned reads (.bam |.sam) e.g. from RNA base conversion techniques such as TimeLapse, SLAM-seq, TUC-seq

   Python 5 4

3. ZeLonewolf/osm-overpass-scripts ZeLonewolf/osm-overpass-scripts Public

   Shell scripts for manipulating OpenStreetMap overpass queries

   R 10 2

4. htseq-count-multi htseq-count-multi Public

   htseq-count version that allows multiple countings of the same .sam file in one pass

   Python

5. SeqTracks-plot-R SeqTracks-plot-R Public

   Functions for creating sequencing data figures in R

   R 1

6. thCHART-analyze thCHART-analyze Public

   Simple pipeline for processing of sequencing data from thCHART, ChIP-seq, APEX-ChIP and similar experiments

   Shell