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bugfix nn_in

bugfix nn_in #1246

Workflow file for this run

name: Build on Linux with SDK
on: [pull_request, release]
jobs:
build:
strategy:
fail-fast: false
matrix:
sdk: ["21.4.1", "22.6.1", "23.7.3"]
runs-on: ubuntu-latest
steps:
- name: Delete unused packages
run: |
# runners have 150GB of disk space and the Ubuntu image is big so we sometimes found it ran out of space for MESA
# others have encountered this too so we took commands from this action
# https://github.com/jlumbroso/free-disk-space
# currently commented because we don't need it and these commands can need changing when the Ubuntu image changes
sudo rm -rf /usr/local/lib/android
# sudo apt-get remove -y '^aspnetcore-.*'
# sudo apt-get remove -y '^dotnet-.*' # 990 MB
# sudo apt-get remove -y '^llvm-.*' # 1052 MB
# sudo apt-get remove -y 'php.*' # 56.6 MB
# sudo apt-get remove -y '^mysql-.*' # 209 MB
# sudo apt-get remove -y azure-cli google-cloud-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri # 2274 MB
sudo apt-get autoremove -y # 771 MB
sudo apt-get clean
- name: Checkout
uses: actions/[email protected]
- name: Create LFS file list
run: |
git lfs ls-files -l | cut -d' ' -f1 | sort > .lfs-assets-id
- name: Restore LFS cache
uses: actions/cache@v3
id: lfs-cache
with:
path: .git/lfs
key: ${{ runner.os }}-${{ hashFiles('.lfs-assets-id') }}-v1
- name: Git LFS Pull
run: git lfs pull
if: steps.lfs-cache.outputs.cache-hit != 'true'
- name: Git LFS Checkout
run: git lfs checkout
if: steps.lfs-cache.outputs.cache-hit == 'true'
- name: Install dependencies Linux
run: |
sudo apt-get -y update
sudo apt-get -y install wget binutils make perl libx11-6 libx11-dev zlib1g zlib1g-dev tcsh
shell: bash
- uses: actions/cache@v3
id: cache
with:
path: |
mesasdk-x86_64-linux-${{matrix.sdk}}.tar.gz
key: ${{ runner.os }}-${{matrix.sdk}}
- name: Get SDK ${{ runner.os }} '21.4.1'
if: ${{ (steps.cache.outputs.cache-hit != 'true') && ( matrix.sdk == '21.4.1') }}
run: |
wget -q https://zenodo.org/record/5802444/files/mesasdk-x86_64-linux-21.4.1.tar.gz
shell: bash
- name: Get SDK ${{ runner.os }} '22.6.1'
if: ${{ (steps.cache.outputs.cache-hit != 'true') && ( matrix.sdk == '22.6.1') }}
run: |
wget -q https://zenodo.org/record/7457681/files/mesasdk-x86_64-linux-22.6.1.tar.gz
shell: bash
- name: Get SDK ${{ runner.os }} '23.7.3'
if: ${{ (steps.cache.outputs.cache-hit != 'true') && ( matrix.sdk == '23.7.3') }}
run: |
wget -q https://zenodo.org/record/10624843/files/mesasdk-x86_64-linux-23.7.3.tar.gz
shell: bash
- name: Unpack SDK ${{ runner.os }} ${{matrix.sdk}}
run: |
tar xvf mesasdk-x86_64-linux-${{matrix.sdk}}.tar.gz
shell: bash
- name: Compile
shell: bash
run: |
# Linux runners have 4 cores
# https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners/about-github-hosted-runners#standard-github-hosted-runners-for-public-repositories
export OMP_NUM_THREADS=4
export NPROCS=4
export "MESASDK_ROOT=$(readlink -f mesasdk)"
source "${MESASDK_ROOT}/bin/mesasdk_init.sh"
export "MESA_DIR=$(readlink -f ./)"
# Everything is run as root so we need to disable the root check in the install script
sed -i 's/\${EUID:-\$(id -u)}/1/' install
# Turn off caching during build to save more space
sed -i 's/use_cache_for_eos = .true./use_cache_for_eos = .false./g' $MESA_DIR/eos/public/eos_def.f90
sed -i 's/use_cache = .true./use_cache = .false./g' $MESA_DIR/star/private/star_private_def.f90
./install
if [ ! -f lib/libbinary.a ]; then
exit 1
fi