From 6c971cf78ab7b099e93a601aade2d07626afbaa9 Mon Sep 17 00:00:00 2001 From: RemDelaporteMathurin Date: Tue, 17 Dec 2024 16:46:24 -0500 Subject: [PATCH] added an attribute to LSCReader --- libra_toolbox/tritium/lsc_measurements.py | 7 ++++++- test/tritium/test_lsc_reader.py | 10 ++++++++++ 2 files changed, 16 insertions(+), 1 deletion(-) diff --git a/libra_toolbox/tritium/lsc_measurements.py b/libra_toolbox/tritium/lsc_measurements.py index 60ac26a..e8f6845 100644 --- a/libra_toolbox/tritium/lsc_measurements.py +++ b/libra_toolbox/tritium/lsc_measurements.py @@ -11,6 +11,8 @@ class LSCFileReader: + quench_set: str + def __init__( self, file_path: str, @@ -29,6 +31,7 @@ def __init__( self.labels_column = labels_column self.data = None self.header_content = None + self.quench_set = None def read_file(self): """ @@ -50,12 +53,14 @@ def read_file(self): with open(self.file_path, "r") as file: lines = file.readlines() for i, line in enumerate(lines): + if line.startswith("Quench Set:"): + quench_set_line_idx = i + 1 if line.startswith("S#"): start = i break header_lines.append(line) self.header_content = "".join(header_lines) - + self.quench_set = lines[quench_set_line_idx].strip() # read the file with dataframe starting from the line with S# self.data = pd.read_csv(self.file_path, skiprows=start) diff --git a/test/tritium/test_lsc_reader.py b/test/tritium/test_lsc_reader.py index bd2f0e2..02ad3c1 100644 --- a/test/tritium/test_lsc_reader.py +++ b/test/tritium/test_lsc_reader.py @@ -47,3 +47,13 @@ def test_lsc_reader_label_automated(): assert len(bq1_values) == 10 assert len(bq1_values_with_labels) == 10 + + +def test_read_quench_set(): + """Tests reading the quench set from the LSC file""" + filename = Path(__file__).parent / "test_lsc_file_with_labels.csv" + + csv_reader = LSCFileReader(filename, labels_column="SMPL_ID") + csv_reader.read_file() + + assert csv_reader.quench_set == "Low Energy: 3H-UG"