New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Tool to use for SV clustering that is compatible with paragraph genotyping #87

Open

JoannaTan opened this issue Nov 11, 2024 · 0 comments

JoannaTan commented Nov 11, 2024

Hi,

We have ran multiple SV callers for short-read data and we want to merge the calls across SV callers and re-genotype our CRAM files using paragraph.

Is there any specific tool that you would recommend for the clustering of SV calls across tools?

Thank you.

Best regards,
Joanna

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment