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update readme with pipeline homes
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sitag committed Oct 17, 2019
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Expand Up @@ -12,6 +12,14 @@ The documentation and code to compute metrics for all core assays are located [h

Documentation on the ongoing effort to create uniform pipelines across all data producing centres is available [here](/pipelines).

#### Pipeline Code
#### IHEC Pipelines

The computational pipeline adopted by IHEC are available via following IHEC repositories:


* [Bisulfite-Seq](https://github.com/IHEC/gemBS)
* [ChIP-Seq](https://github.com/IHEC/integrative_analysis_chip)
* [RNA-Seq](https://github.com/IHEC/grape-nf)

Please see the individual pipelines' documentation for releases, workflows and directions on using the pipelines.

All pipeline code is available under [ihec-pipelines-dev branch of this repository](https://github.com/IHEC/ihec-assay-standards/tree/ihec-pipelines-dev) while under development.

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