- Python3 compatibility fixes
- Use chromosome ordering from reference
- Use semi-colon as delimiter within identifier field
- Output warning if any mismatch to reference genome in indel source sequence
- Count length of indel when scoring deletion reference allele
- Enable caching of genomic reference data
- Enable processing of multiple GTC files or directories for improved performance
- Address issue with incorrect assignment of reference allele for indels
- Added script to build reference FASTA files for human
- Eliminated extraneous header in column
- Initial release