Functional Genomics Notebook Template

This is a template. Create a new repo from it!

Getting Started

Install docker and docker-compose. This should get you started depending on your platform.
Run docker-compose up --build! (The --build will rebuild the container if you make any changes, ie to the requirements.txt)

docker-compose up --build

Copy the link to your local jupyter instance from the terminal and open it in your browser.

biopython
bioconductor-deseq2
r-seurat