Calibration module (for R0)

[omri312]

Point of Contact: Omer Deutsch

For the new matrix, we should have a new normalization module.
It will do the following -

• Run the simulation (using a simulation manager) for X steps (X should be small, yet bigger than a full cycle of the disease, say 30).
• Calculate R-effective (This should be done carefully. Theoretically - take ln of total infected, then take the slope of the linear curve you should recieve).
• Output R-effective.

This should be run speeratly from the simulation, and output a factor for the normalization.
When running the simulation, it will take the factor as an input, and the SimulationManager of the real simulation will take this constant and act upon it.