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index.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Computational Cancer Biology and Epigenomics Lab</title>
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.0.0-beta3/css/all.min.css">
<link rel="stylesheet" href="https://fonts.googleapis.com/css2?family=Roboto:wght@400;700&family=Open+Sans:wght@400;700&display=swap">
<style>
body {
font-family: 'Roboto', Arial, sans-serif;
font-size: 10px
margin: 0;
padding: 0;
display: grid;
grid-template-areas:
"sidebar topbar"
"sidebar main";
grid-template-columns: 250px 1fr;
grid-template-rows: auto 1fr;
height: 100vh;
box-sizing: border-box;
background: #fff;
}
.topbar {
grid-area: topbar;
background: #173e73;
color: #fff;
padding: 10px;
text-align: center;
font-size: 1.5em;
}
.sidebar {
display: flex;
flex-direction: column;
flex: 1;
grid-area: sidebar;
padding: 20px;
background: #d8e6f2;
border-right: 1px solid #ddd;
}
.main {
grid-area: main;
display: grid;
grid-template-areas:
"research team software"
"publications positions other";
grid-template-columns: 1fr 1fr 1fr;
grid-template-rows: 1fr 1fr;
gap: 10px;
padding: 10px;
overflow: auto;
}
.logo {
display: flex;
flex-direction: column;
align-items: center;
margin-bottom: 20px;
}
.logo img {
height: 150px;
margin-right: 10px;
}
section {
padding: 0.25em;
background: none;
border: 1px solid #ddd;
border-radius: 8px;
}
.research {
grid-area: research;
}
.team {
grid-area: team;
}
.publications {
grid-area: publications;
}
.software {
grid-area: software;
}
.funding {
grid-area: funding;
}
.contact-details {
margin-top: 20px;
text-align: center;
}
.contact-details h2 {
font-size: 1.2em;
margin-bottom: 10px;
font-family: 'Open Sans', Arial, sans-serif;
}
.contact-details p {
font-size: 0.9em;
line-height: 1.5;
text-align: left;
}
.other {
grid-area: other;
}
h2 {
margin-bottom: 0.5em;
}
ul {
list-style: none;
padding: 0;
}
li {
background: none;
padding: 2px;
margin-bottom: 2px;
border: none;
}
a {
color: #0066cc;
text-decoration: none;
}
a:hover {
color: #004099;
text-decoration: underline;
font-weight: bold;
}
a:visited {
color: #0055aa;
}
a:active {
color: #003366;
}
</style>
</head>
<body>
<div class="topbar">
<h1>Computational Cancer Biology and Epigenomics Lab</h1>
</div>
<div class="sidebar">
<div class="logo">
<img src="img/ccbe_logo_upd.png" alt="Lab Logo">
</div>
<div class="contact-details">
<p>
<b>Department of Oncology</b></br>
KU Leuven</br>
Herestraat 49</br>
3001 Leuven
</p>
<p>Contact: </br>pavlo[dot]lutsik[at]kuleuven[dot]be</p>
</div>
</div>
<div class="main">
<section id="research" class="research">
<h2>Research foci</h2>
<ul>
<li>Methylome deconvolution</li>
<li>Cancer cell-of-origin inference</li>
<li>Single-cell and spatial epigenomics</li>
<li>Oncohistone malignancies</li>
</ul>
</section>
<section id="team" class="team">
<h2>Team</h2>
<ul>
<li><a href="https://www.kuleuven.be/wieiswie/en/person/00153916">Pavlo Lutsik</a> PI</li>
<li><b>KU Leuven</b></li>
<ul>
<li><a href="https://www.kuleuven.be/wieiswie/en/person/00169053">Antonella Sarnataro</a> Postdoc</li>
<li><a href="https://www.kuleuven.be/wieiswie/en/person/00160638">Guillaume Sacchetti</a> PhD student</li>
<li><a href="https://www.kuleuven.be/wieiswie/en/person/00033628">Joke Delsupehe</a> administrative assistant</li>
</ul>
<li><b>German Cancer Research Center (DKFZ)</b></li>
<ul>
<li><a href="https://www.dkfz.de/en/CanEpi/staff/Jeong.html"> Yunhee Jeong </a> Postdoc, CancerTRAX Fellow</li>
<li><a href="https://www.dkfz.de/en/CanEpi/staff/May.html"> Mei-Ju Chen </a> Postdoc, joint with Plass lab</li>
<li><a href="https://www.dkfz.de/en/CanEpi/staff/Kelly_Katherine.html"> Katherine Kelly </a> PhD Student, joint with Plass lab</li>
<li><a href="https://www.dkfz.de/en/CanEpi/staff/Sollier_Etienne.html"> Etienne Sollier </a> PhD Student, joint with Plass lab</li>
<li><a href="https://abdulmoeed.net"> Abdul Moeed </a> PhD student, joint with Stegle lab</li>
</ul>
</ul>
</section>
<section id="software" class="software">
<h2>Software</h2>
<ul>
<li><b>DNA methylome deconvolution</b></li>
<li>
<a href="http:/github.com/CompEpigen/MeDeCom">MeDeCom</a>
<a href="http:/github.com/CompEpigen/methylbert">MethylBERT</a>
</li>
<li></li>
<li><b>DNA methylation data analysis</b></li>
<li>
<a href="https://rnbeads.org/">RnBeads</a>
<a href="https://biq.mpi-inf.mpg.de/">BiQ Analyzer HT/HiMod</a> <br>
<a href="https://github.com/CompEpigen/methrix">methrix</a>
<a href="https://amplicondesign.dkfz.de">AmpliconDesign</a>
</li>
<li></li>
<li><b>Single-cell epigenomics</b></li>
<li>
<a href="https://github.com/BIMSBbioinfo/scmaui">scMAUI</a>
<a href="https://github.com/CompEpigen/epiCHAOS">epiCHAOS</a>
</li>
<li></li>
<li><b>General bioinformatic tools</b></li>
<li>
<a href="https://github.com/workflux/workflux">workflUX</a>
<a href="https://github.com/CompEpigen/figeno">figeno</a>
</li>
</ul>
</section>
<section id="publications" class="publications">
<h2>Publications</h2>
<ul>
<li><a href="https://pubmed.ncbi.nlm.nih.gov/?term=%28Lutsik+P%5BAuthor%5D+AND+German+Cancer+Research+Center%5BAffiliation%5D%29+OR+%28Lutsik+P%5BAuthor%5D+AND+KU+Leuven%5BAffiliation%5D%29&sort=date">
Pubmed</a></li>
<li><a href="https://scholar.google.com/citations?user=PB9nc_0AAAAJ&hl=de">Google Scholar</a></li>
<li><a href="http://lirias.kuleuven.be/cv?Username=u0153916">KU Leuven Lirias</a></li>
</ul>
</section>
<section id="positions" class="Positions">
<h2>Positions</h2>
<ul>
<a href="https://academicpositions.com/ad/ku-leuven/2024/phd-student-in-single-cell-multiomics-of-skeletal-stem-cells/222551">
PhD Student</a> in single-cell multiomics of skeletal stem cells
</ul>
</section>
<section id="other" class="other">
<h2>Links</h2>
<ul>
<li>KU Leuven <a href="https://research.kuleuven.be/portal/en/unit/57033702?hl=en&lang=en">research portal</a></li>
<li>KU Leuven <a href="https://www.kuleuven.be/wieiswie/en/unit/regional/57033702">organisational chart</a></li>
<li>DKFZ group <a href="https://www.dkfz.de/en/CanEpi/CompEpigen/index.html">page</a></li>
<li>Alumni</li>
</ul>
</section>
</div>
</body>
</html>