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To better match the standards introduced in PySAP issue #179 I propose that the following changes be made to PySAP-ETomo.
in examples
Add a README.txt with the following content:
.. _etomo_examples:
ETomo Examples
--------------
Here we present a selection of examples using tools provided in the PySAP-ETomo plug-in.
Prefix all example file names with plot_, so that a thumbnail can be displayed.
For any images to be rendered (including the thumbnail) use Matplotlib instead of the PySAP built-in show method. Note that the thumbnail will be the first image rendered.
Use # %% to define new notebook cells.
in etomo
Update __init__.py as follows.
"""PYSAP-ETOMO.This plug-in provides tools for electron tomography data processing."""
Ensure that all parameters/returns data types are valid (where possible). (e.g. np.array -> numpy.ndarray)
To better match the standards introduced in PySAP issue #179 I propose that the following changes be made to PySAP-ETomo.
in
examples
README.txt
with the following content:plot_
, so that a thumbnail can be displayed.show
method. Note that the thumbnail will be the first image rendered.# %%
to define new notebook cells.in
etomo
__init__.py
as follows.np.array
->numpy.ndarray
)Refer to PySAP-ASTRO for examples.
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