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config.yaml
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config.yaml
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WORKING_DIR: leaves_only
REPO_PATH: .
KEYCLOAK_CONFIG: keycloak_config.yml
TOKEN_USERNAME: null
TOKEN_PASSWORD: null
SERVICE_TOKEN: False
NEXUS_IDS_FILE: nexus_ids.json
FORGE_CONFIG: forge-config.yml
RULES_CONFIG_DIR_TEMPLATES: rules_config_dir_templates
NEW_ATLAS: False
RESOLUTION: "25"
EXPORT_MESHES: True
NEXUS_REGISTRATION: False
RESOURCE_TAG: null # if null, a tag corresponding to the timestamp will be generated
DISPLAY_HELP: False
NEXUS_PROD_ENV: "https://bbp.epfl.ch/nexus/v1"
#NEXUS_STAGING_ENV: "https://staging.nexus.ocp.bbp.epfl.ch/v1"
NEXUS_STAGING_ENV: "https://staging.nise.bbp.epfl.ch/nexus/v1"
IS_PROD_ENV: False
ATLAS_RELEASE_NAME: "Blue Brain Atlas"
ATLAS_RELEASE_DESCRIPTION: "The official Atlas of the Blue Brain Project"
# The pipeline will fetch the necessary datasets from:
NEXUS_ATLAS_ORG: "bbp"
NEXUS_ATLAS_PROJ: "atlas"
NEXUS_ONTOLOGY_ORG: "neurosciencegraph"
NEXUS_ONTOLOGY_PROJ: "datamodels"
# The pipeline will push the generated datasets into:
NEXUS_DESTINATION_ORG: "bbp"
NEXUS_DESTINATION_PROJ: "atlas"
CELL_COMPOSITION_NAME: "Cell Composition from Blue Brain Atlas"
CELL_COMPOSITION_SUMMARY_NAME: "Cell Composition Summary from Blue Brain Atlas"
CELL_COMPOSITION_VOLUME_NAME: "Cell Composition Volume from Blue Brain Atlas"