docker-compose.yaml

version: '3'
services:
  mysql:
    image: mysql:latest
    restart: always
    environment:
      MYSQL_ROOT_PASSWORD: mypassword
      MYSQL_DATABASE: bioos
    ports:
      - "3306:3306"
    volumes:
      - mysql-storage:/var/lib/mysql
    networks:
      - bioos
  apiserver:
    build:
      context: .
      dockerfile: build/apiserver/Dockerfile
    restart: always
    environment:
      MYSQL_HOST: mysql
      MYSQL_USERNAME: root
      MYSQL_PASSWORD: mypassword
      MYSQL_PORT: "3306"
      MYSQL_DB: bioos
    command: ["--config", "/app/conf/apiserver-mysql.yaml", "--log-level", "debug"]
    ports:
      - "8888:8888"
      - "50051:50051"
    volumes:
      - bioos-storage:/app/conf/fs
    depends_on:
      - mysql
    networks:
      - bioos
  web:
    build:
      context: .
      dockerfile: build/web/Dockerfile
    restart: always
    depends_on:
      - apiserver
    ports:
      - "8901:80"
    networks:
      - bioos
  cromwell:
    image: broadinstitute/cromwell:85
    restart: always
    command:
      - server
    ports:
      - "8000:8000"
    volumes:
      - bioos-storage:/nfs/bioos-storage
    networks:
      - bioos
networks:
  bioos:
    driver: bridge
volumes:
  bioos-storage:
  mysql-storage: