-
Notifications
You must be signed in to change notification settings - Fork 0
/
NEWS
44 lines (35 loc) · 1.76 KB
/
NEWS
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
Version 0.99.1: Original
Version 0.99.2:
Bugfix:
- Example ERROR fixed, generates ERROR message when no change points are identified.
Version 0.99.3:
Bugfix:
- Example ERROR fixed, generates ERROR message when no change points are identified.
Version 0.99.4:
Bugfix:
- Example ERROR fixed, generates ERROR message when no change points are identified.
Version 1.1.0
First Release version
Version 1.1.1:
New Features:
- For more than 3 genes, standard zscore is computed instead of GSVA enrichment scores
- For sample size less than 3, zscore can not be computed, program generates an error
- SISPA can now run on a single data type or any combination of two numeric data types
- changepoint R method options as input parameters
- implemented ggplot to create barplot in the freqplot function
- Updated vignettes as pdf file to perform 1D and 2D SISPA analysis
- SISPA.R numeric ERROR fixed
Version 1.1.2:
New Features:
- cptSamples.R changepoint ERROR fixed
Version 1.1.3:
New Features:
- cptSamples.R Example ERROR fixed
- Description File Formatted
- Modified Y-axis Label in the function generating the Waterfall Plot
- Modified SISPA.R code to input data frame for genes and samples of interest only.
- Added change point method option using mean and variance (cpt.meanvar) data
- updated SISPA manual
Bhakti Dwivedi and Jeanne Kowalski
The Winship Cancer Institute, Emory University
https://bbisr.winship.emory.edu/