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landsnails-occurrences

Research Project Landsnails

Landsnails in Spain & Gran Canaria

Rationale

This repository contains the functionality to standardize the data of the Landsnails of Spain dataset to a Darwin Core Occurrence that can be harvested by GBIF.

Workflow

source data → Darwin Core mapping script → generated Darwin Core files

Published dataset

Repo structure

The repository structure is based on Cookiecutter Data Science and the Checklist recipe. Files and directories indicated with GENERATED should not be edited manually.

├── README.md              : Description of this repository
├── LICENSE                : Repository license
├── checklist-recipe.Rproj : RStudio project file
├── .gitignore             : Files and directories to be ignored by git
│
├── data
│   ├── raw                : Source data, input for mapping script
│   └── processed          : Darwin Core output of mapping script GENERATED
│
├── docs                   : Repository website GENERATED
│
└── src
    ├── dwc_mapping.Rmd    : Darwin Core mapping script, core functionality of this repository
    ├── _site.yml          : Settings to build website in docs/
    └── index.Rmd          : Template for website homepage

Installation

  1. Click on Use this template to create a new repository on your account
  2. Open the RStudio project file
  3. Open the dwc_mapping.Rmd R Markdown file in RStudio
  4. Install any required packages
  5. Click Run > Run All to generate the processed data
  6. Alternatively, click Build > Build website to generate the processed data and build the website in docs/ (advanced)

Contributors

Ward Langeraert Dimitri Brosens

List of contributors

License

MIT License for the code and documentation in this repository. The included data is released under another license.