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Examples

An example data set is provided:

 ./example/chr19sim.tfam
 ./example/chr19sim.tped

These are case-control (1000 each, 2000 total) data of 100 SNP segment around rs810188 of C3 gene on chr19, generated using GWASimulator and 1000 Genome haplotypes. The SNP rs8110188 is the causal SNP. The script file

 ./example/run/gedi.sh

illustrates some of the usage based on this data set. Run this with

 $ cd ./example/run/
 
 $ chmod 775 gedi.sh
 
 $ ./gedi.sh

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