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Add pathway information to topology.csv file #108

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TaniaCuppens opened this issue Jun 6, 2024 · 0 comments
Open

Add pathway information to topology.csv file #108

TaniaCuppens opened this issue Jun 6, 2024 · 0 comments

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@TaniaCuppens
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Hi,

I created the topology file with gene information using the annovar and topology commands with create_annovar_input and create_gene_network but I can't annotate with the pathway.
I have tried :
python GenNet.py topology -type create_pathway_KEGG -path path/to/topology/file -out path/to/topology/file -study_name ID1

But it doesn't do anything

Thank you for your help

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