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start.sh
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start.sh
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#!/bin/bash
echo -e ""
echo -e "https://github.com/AntonieV/NodeRAD.git ▒ "
echo -e "by Antonie Vietor ▓ "
echo -e " ░█ "
echo -e " ░░██ "
echo -e " ░ ▒▓█████ "
echo -e " ▒█░░ ░▒▓██ "
echo -e " ░████████▓▒ ░██ "
echo -e " ██▓▓▒░░ ░▒██ "
echo -e " ██▒ ▒▓██████ "
echo -e " ███▓ ░▒███ "
echo -e " ████ ▒███░ "
echo -e " ░███░ "
echo -e " ░██ ░███░ "
echo -e " ░███ ░██ "
echo -e "███╗ ██╗ ██████╗ ██████╗ ███████╗ ██▓ ░░▒██░ ██████╗ █████╗ ██████╗ "
echo -e "████╗ ██║██╔═══██╗██╔══██╗██╔════╝ ██▒ ▒▒▓█████████░ ██╔══██╗██╔══██╗██╔══██╗"
echo -e "██╔██╗ ██║██║ ██║██║ ██║█████╗ ▒█▓░ ░░▒▒▓▓██▒ ██████╔╝███████║██║ ██║"
echo -e "██║╚██╗██║██║ ██║██║ ██║██╔══╝ ▒██▓▒░░░ ░██▒ ██╔══██╗██╔══██║██║ ██║"
echo -e "██║ ╚████║╚██████╔╝██████╔╝███████╗ █████████▓▒▒ ▄█▀░ ██║ ██║██║ ██║██████╔╝"
echo -e "╚═╝ ╚═══╝ ╚═════╝ ╚═════╝ ╚══════╝ ░██▓▓▒▒░░░░ ███░ ╚═╝ ╚═╝╚═╝ ╚═╝╚═════╝ "
echo -e " ███▒ ███ "
echo -e " ████ ██▀ "
echo -e " █████ "
echo -e " ░█▓ ░████ "
echo -e " ░██▓ ░██░ "
echo -e " ██████▓▒ ░██ "
echo -e " ██▓▒▒░ ░██ "
echo -e " ░█░ ▒▒▓███████░ "
echo -e " ██▒░ ░░▒▒▓▓█▒ "
echo -e " ██████▓▒▒ ░ "
echo -e " █▓▓▒░░ "
echo -e " ▓░ NodeRAD v1.0 "
echo -e " ▒ "
echo -e ""
echo -e "Loading...";sleep 3
source ~/miniconda3/etc/profile.d/conda.sh
conda activate snakemake
snakemake --use-conda --conda-frontend mamba --cores $(nproc) --show-failed-logs --conda-cleanup-pkgs cache -R all
snakemake --report
xdg-open report.html
xdg-open results/qc/multiqc/multiqc.html