From 667597212b5b2f2adc4657eb7257e2f96d2b8767 Mon Sep 17 00:00:00 2001 From: Christopher Morrison Date: Wed, 13 Nov 2024 15:27:03 -0800 Subject: [PATCH] Add initial taxonomy webpage. --- .../20241130/class.html | 92 + .../20241130/cluster.html | 5950 +++++++++++++++++ .../20241130/neurotransmitter.html | 44 + .../20241130/subclass.html | 706 ++ .../20241130/supertype.html | 2179 ++++++ ...create_aging_cluster_annotation_html.ipynb | 3065 +++++++++ .../create_cluster_annotation_html.ipynb | 1018 ++- ...e_clustering_analysis_and_annotation.ipynb | 412 +- 8 files changed, 13357 insertions(+), 109 deletions(-) create mode 100644 _static/Zeng-Aging-Mouse-taxonomy/20241130/class.html create mode 100644 _static/Zeng-Aging-Mouse-taxonomy/20241130/cluster.html create mode 100644 _static/Zeng-Aging-Mouse-taxonomy/20241130/neurotransmitter.html create mode 100644 _static/Zeng-Aging-Mouse-taxonomy/20241130/subclass.html create mode 100644 _static/Zeng-Aging-Mouse-taxonomy/20241130/supertype.html create mode 100644 docs/cluster_annotations/create_aging_cluster_annotation_html.ipynb diff --git a/_static/Zeng-Aging-Mouse-taxonomy/20241130/class.html b/_static/Zeng-Aging-Mouse-taxonomy/20241130/class.html new file mode 100644 index 0000000..3b7c508 --- /dev/null +++ b/_static/Zeng-Aging-Mouse-taxonomy/20241130/class.html @@ -0,0 +1,92 @@ + + + Zeng-Aging-Mouse-taxonmy: cell type classes + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
class
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02 NP-CT-L6b Glut
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34 Immune
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[-]
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0015 L6 IT CTX Glut_3
[-]
19_L6 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0016 L6 IT CTX Glut_4
[-]
20_L6 IT CTX Glut_4
Glut
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0017 L6 IT CTX Glut_5
[-]
21_L6 IT CTX Glut_5
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0018 L5 IT CTX Glut_1
[-]
22_L5 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[-]
23_L5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[-]
24_L5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[-]
25_L5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[-]
26_L5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[-]
27_L5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0022 L5 IT CTX Glut_5
[-]
28_L5 IT CTX Glut_5
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0023 L4/5 IT CTX Glut_1
[-]
29_L4/5 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0023 L4/5 IT CTX Glut_1
[-]
30_L4/5 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0023 L4/5 IT CTX Glut_1
[-]
31_L4/5 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0023 L4/5 IT CTX Glut_1
[-]
32_L4/5 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0024 L4/5 IT CTX Glut_2
[-]
33_L4/5 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0025 L4/5 IT CTX Glut_3
[-]
34_L4/5 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0025 L4/5 IT CTX Glut_3
[-]
35_L4/5 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0025 L4/5 IT CTX Glut_3
[-]
36_L4/5 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0026 L4/5 IT CTX Glut_4
[-]
37_L4/5 IT CTX Glut_4
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0026 L4/5 IT CTX Glut_4
[-]
38_L4/5 IT CTX Glut_4
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0026 L4/5 IT CTX Glut_4
[-]
39_L4/5 IT CTX Glut_4
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0026 L4/5 IT CTX Glut_4
[-]
40_L4/5 IT CTX Glut_4
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0027 L4/5 IT CTX Glut_5
[-]
41_L4/5 IT CTX Glut_5
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0027 L4/5 IT CTX Glut_5
[-]
42_L4/5 IT CTX Glut_5
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0027 L4/5 IT CTX Glut_5
[-]
43_L4/5 IT CTX Glut_5
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0028 L4/5 IT CTX Glut_6
[-]
44_L4/5 IT CTX Glut_6
Glut
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0028 L4/5 IT CTX Glut_6
[-]
45_L4/5 IT CTX Glut_6
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0029 L2/3 IT CTX Glut_1
[-]
46_L2/3 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0029 L2/3 IT CTX Glut_1
[-]
47_L2/3 IT CTX Glut_1
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0030 L2/3 IT CTX Glut_2
[-]
48_L2/3 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0030 L2/3 IT CTX Glut_2
[-]
49_L2/3 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0030 L2/3 IT CTX Glut_2
[-]
50_L2/3 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0030 L2/3 IT CTX Glut_2
[-]
51_L2/3 IT CTX Glut_2
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0031 L2/3 IT CTX Glut_3
[-]
52_L2/3 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0031 L2/3 IT CTX Glut_3
[-]
53_L2/3 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0031 L2/3 IT CTX Glut_3
[-]
54_L2/3 IT CTX Glut_3
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0033 L2/3 IT ENT Glut_1
[-]
55_L2/3 IT ENT Glut_1
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0033 L2/3 IT ENT Glut_1
[-]
56_L2/3 IT ENT Glut_1
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0035 L2/3 IT ENT Glut_3
[-]
57_L2/3 IT ENT Glut_3
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0035 L2/3 IT ENT Glut_3
[-]
58_L2/3 IT ENT Glut_3
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0035 L2/3 IT ENT Glut_3
[-]
59_L2/3 IT ENT Glut_3
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0036 L2/3 IT ENT Glut_4
[-]
60_L2/3 IT ENT Glut_4
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0037 L2/3 IT ENT Glut_5
[-]
61_L2/3 IT ENT Glut_5
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0037 L2/3 IT ENT Glut_5
[-]
62_L2/3 IT ENT Glut_5
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0038 L2/3 IT ENT Glut_6
[-]
63_L2/3 IT ENT Glut_6
Glut
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0038 L2/3 IT ENT Glut_6
[-]
64_L2/3 IT ENT Glut_6
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0039 L2/3 IT PIR-ENTl Glut_1
[-]
65_L2/3 IT PIR-ENTl Glut_1
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0039 L2/3 IT PIR-ENTl Glut_1
[-]
66_L2/3 IT PIR-ENTl Glut_1
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
67_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
68_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
69_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
70_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
71_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[-]
72_L2/3 IT PIR-ENTl Glut_4
Glut
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0043 L2/3 IT PIR-ENTl Glut_5
[-]
73_L2/3 IT PIR-ENTl Glut_5
Glut
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0051 L2 IT ENT-po Glut_1
[-]
74_L2 IT ENT-po Glut_1
Glut
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0052 L2 IT ENT-po Glut_2
[-]
75_L2 IT ENT-po Glut_2
Glut
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0054 L2 IT ENT-po Glut_4
[-]
76_L2 IT ENT-po Glut_4
Glut
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0066 ENTmv-PA-COAp Glut_1
[-]
77_ENTmv-PA-COAp Glut_1
Glut
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0067 ENTmv-PA-COAp Glut_2
[-]
78_ENTmv-PA-COAp Glut_2
Glut
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0068 ENTmv-PA-COAp Glut_3
[-]
79_ENTmv-PA-COAp Glut_3
Glut
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0068 ENTmv-PA-COAp Glut_3
[-]
80_ENTmv-PA-COAp Glut_3
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
81_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
82_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
83_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
84_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
85_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
86_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
87_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[-]
88_CA1-ProS Glut_1
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0070 CA1-ProS Glut_2
[-]
89_CA1-ProS Glut_2
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0070 CA1-ProS Glut_2
[-]
90_CA1-ProS Glut_2
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0070 CA1-ProS Glut_2
[-]
91_CA1-ProS Glut_2
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0070 CA1-ProS Glut_2
[-]
92_CA1-ProS Glut_2
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0071 CA1-ProS Glut_3
[-]
93_CA1-ProS Glut_3
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0072 CA1-ProS Glut_4
[-]
94_CA1-ProS Glut_4
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0072 CA1-ProS Glut_4
[-]
95_CA1-ProS Glut_4
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0072 CA1-ProS Glut_4
[-]
96_CA1-ProS Glut_4
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0073 CA1-ProS Glut_5
[-]
97_CA1-ProS Glut_5
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0073 CA1-ProS Glut_5
[-]
98_CA1-ProS Glut_5
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0074 CA1-ProS Glut_6
[-]
100_CA1-ProS Glut_6
Glut
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0074 CA1-ProS Glut_6
[-]
99_CA1-ProS Glut_6
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0075 CA3 Glut_1
[-]
101_CA3 Glut_1
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0075 CA3 Glut_1
[-]
102_CA3 Glut_1
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0076 CA3 Glut_2
[-]
103_CA3 Glut_2
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0076 CA3 Glut_2
[-]
104_CA3 Glut_2
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0077 CA3 Glut_3
[-]
105_CA3 Glut_3
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0077 CA3 Glut_3
[-]
106_CA3 Glut_3
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0078 CA3 Glut_4
[-]
107_CA3 Glut_4
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0078 CA3 Glut_4
[-]
108_CA3 Glut_4
Glut
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0079 CA3 Glut_5
[-]
109_CA3 Glut_5
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0080 L2 IT PPP-APr Glut_1
[-]
110_L2 IT PPP-APr Glut_1
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0080 L2 IT PPP-APr Glut_1
[-]
111_L2 IT PPP-APr Glut_1
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0080 L2 IT PPP-APr Glut_1
[-]
112_L2 IT PPP-APr Glut_1
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0080 L2 IT PPP-APr Glut_1
[-]
113_L2 IT PPP-APr Glut_1
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0081 L2 IT PPP-APr Glut_2
[-]
114_L2 IT PPP-APr Glut_2
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0081 L2 IT PPP-APr Glut_2
[-]
115_L2 IT PPP-APr Glut_2
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0081 L2 IT PPP-APr Glut_2
[-]
116_L2 IT PPP-APr Glut_2
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0082 L2 IT PPP-APr Glut_3
[-]
117_L2 IT PPP-APr Glut_3
Glut
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0083 L2 IT PPP-APr Glut_4
[-]
118_L2 IT PPP-APr Glut_4
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0084 L2/3 IT PPP Glut_1
[-]
119_L2/3 IT PPP Glut_1
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0084 L2/3 IT PPP Glut_1
[-]
120_L2/3 IT PPP Glut_1
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0084 L2/3 IT PPP Glut_1
[-]
121_L2/3 IT PPP Glut_1
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0085 L2/3 IT PPP Glut_2
[-]
122_L2/3 IT PPP Glut_2
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0085 L2/3 IT PPP Glut_2
[-]
123_L2/3 IT PPP Glut_2
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0086 L2/3 IT PPP Glut_3
[-]
124_L2/3 IT PPP Glut_3
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0086 L2/3 IT PPP Glut_3
[-]
125_L2/3 IT PPP Glut_3
Glut
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0086 L2/3 IT PPP Glut_3
[-]
126_L2/3 IT PPP Glut_3
Glut
01 IT-ET Glut
[-]
020 L2/3 IT RSP Glut
[-]
0087 L2/3 IT RSP Glut_1
[-]
127_L2/3 IT RSP Glut_1
Glut
01 IT-ET Glut
[-]
020 L2/3 IT RSP Glut
[-]
0088 L2/3 IT RSP Glut_2
[-]
128_L2/3 IT RSP Glut_2
Glut
01 IT-ET Glut
[-]
021 L4 RSP-ACA Glut
[-]
0089 L4 RSP-ACA Glut_1
[-]
129_L4 RSP-ACA Glut_1
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0090 L5 ET CTX Glut_1
[-]
130_L5 ET CTX Glut_1
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0090 L5 ET CTX Glut_1
[-]
131_L5 ET CTX Glut_1
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0091 L5 ET CTX Glut_2
[-]
132_L5 ET CTX Glut_2
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0091 L5 ET CTX Glut_2
[-]
133_L5 ET CTX Glut_2
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0091 L5 ET CTX Glut_2
[-]
134_L5 ET CTX Glut_2
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0091 L5 ET CTX Glut_2
[-]
135_L5 ET CTX Glut_2
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0094 L5 ET CTX Glut_5
[-]
136_L5 ET CTX Glut_5
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0094 L5 ET CTX Glut_5
[-]
137_L5 ET CTX Glut_5
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0095 L5 ET CTX Glut_6
[-]
138_L5 ET CTX Glut_6
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0095 L5 ET CTX Glut_6
[-]
139_L5 ET CTX Glut_6
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0095 L5 ET CTX Glut_6
[-]
140_L5 ET CTX Glut_6
Glut
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0095 L5 ET CTX Glut_6
[-]
141_L5 ET CTX Glut_6
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0096 SUB-ProS Glut_1
[-]
142_SUB-ProS Glut_1
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0096 SUB-ProS Glut_1
[-]
143_SUB-ProS Glut_1
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0096 SUB-ProS Glut_1
[-]
144_SUB-ProS Glut_1
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
145_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
146_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
147_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
148_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
149_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[-]
150_SUB-ProS Glut_2
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0098 SUB-ProS Glut_3
[-]
151_SUB-ProS Glut_3
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0098 SUB-ProS Glut_3
[-]
152_SUB-ProS Glut_3
Glut
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0098 SUB-ProS Glut_3
[-]
153_SUB-ProS Glut_3
Glut
01 IT-ET Glut
[-]
024 L5 PPP Glut
[-]
0099 L5 PPP Glut_1
[-]
154_L5 PPP Glut_1
Glut
01 IT-ET Glut
[-]
024 L5 PPP Glut
[-]
0099 L5 PPP Glut_1
[-]
155_L5 PPP Glut_1
Glut
01 IT-ET Glut
[-]
025 CA2-FC-IG Glut
[-]
0101 CA2-FC-IG Glut_2
[-]
156_CA2-FC-IG Glut_2
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0106 L6b/CT ENT Glut_1
[-]
157_L6b/CT ENT Glut_1
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0106 L6b/CT ENT Glut_1
[-]
158_L6b/CT ENT Glut_1
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0106 L6b/CT ENT Glut_1
[-]
159_L6b/CT ENT Glut_1
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0106 L6b/CT ENT Glut_1
[-]
160_L6b/CT ENT Glut_1
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0107 L6b/CT ENT Glut_2
[-]
161_L6b/CT ENT Glut_2
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0107 L6b/CT ENT Glut_2
[-]
162_L6b/CT ENT Glut_2
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0108 L6b/CT ENT Glut_3
[-]
163_L6b/CT ENT Glut_3
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0108 L6b/CT ENT Glut_3
[-]
164_L6b/CT ENT Glut_3
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0109 L6b/CT ENT Glut_4
[-]
165_L6b/CT ENT Glut_4
Glut
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0109 L6b/CT ENT Glut_4
[-]
166_L6b/CT ENT Glut_4
Glut
02 NP-CT-L6b Glut
[-]
029 L6b CTX Glut
[-]
0112 L6b CTX Glut_3
[-]
167_L6b CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
029 L6b CTX Glut
[-]
0113 L6b CTX Glut_4
[-]
168_L6b CTX Glut_4
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0114 L6 CT CTX Glut_1
[-]
169_L6 CT CTX Glut_1
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0115 L6 CT CTX Glut_2
[-]
170_L6 CT CTX Glut_2
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0116 L6 CT CTX Glut_3
[-]
171_L6 CT CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0116 L6 CT CTX Glut_3
[-]
172_L6 CT CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0116 L6 CT CTX Glut_3
[-]
173_L6 CT CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0116 L6 CT CTX Glut_3
[-]
174_L6 CT CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0117 L6 CT CTX Glut_4
[-]
175_L6 CT CTX Glut_4
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0118 L6 CT CTX Glut_5
[-]
176_L6 CT CTX Glut_5
Glut
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0118 L6 CT CTX Glut_5
[-]
177_L6 CT CTX Glut_5
Glut
02 NP-CT-L6b Glut
[-]
031 CT SUB Glut
[-]
0120 CT SUB Glut_1
[-]
178_CT SUB Glut_1
Glut
02 NP-CT-L6b Glut
[-]
031 CT SUB Glut
[-]
0121 CT SUB Glut_2
[-]
179_CT SUB Glut_2
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0122 L5 NP CTX Glut_1
[-]
180_L5 NP CTX Glut_1
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0122 L5 NP CTX Glut_1
[-]
181_L5 NP CTX Glut_1
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0123 L5 NP CTX Glut_2
[-]
182_L5 NP CTX Glut_2
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0124 L5 NP CTX Glut_3
[-]
183_L5 NP CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0124 L5 NP CTX Glut_3
[-]
184_L5 NP CTX Glut_3
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0125 L5 NP CTX Glut_4
[-]
185_L5 NP CTX Glut_4
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0125 L5 NP CTX Glut_4
[-]
186_L5 NP CTX Glut_4
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0126 L5 NP CTX Glut_5
[-]
187_L5 NP CTX Glut_5
Glut
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0126 L5 NP CTX Glut_5
[-]
188_L5 NP CTX Glut_5
Glut
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0127 NP SUB Glut_1
[-]
189_NP SUB Glut_1
Glut
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0128 NP SUB Glut_2
[-]
190_NP SUB Glut_2
Glut
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0128 NP SUB Glut_2
[-]
191_NP SUB Glut_2
Glut
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0128 NP SUB Glut_2
[-]
192_NP SUB Glut_2
Glut
02 NP-CT-L6b Glut
[-]
034 NP PPP Glut
[-]
0129 NP PPP Glut_1
[-]
193_NP PPP Glut_1
Glut
02 NP-CT-L6b Glut
[-]
034 NP PPP Glut
[-]
0129 NP PPP Glut_1
[-]
194_NP PPP Glut_1
Glut
03 OB-CR Glut
[-]
036 HPF CR Glut
[-]
0135 HPF CR Glut_1
[-]
195_HPF CR Glut_1
Glut
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0137 DG Glut_2
[-]
196_DG Glut_2
Glut
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0137 DG Glut_2
[-]
197_DG Glut_2
Glut
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0137 DG Glut_2
[-]
198_DG Glut_2
Glut
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0139 DG Glut_4
[-]
199_DG Glut_4
Glut
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0139 DG Glut_4
[-]
200_DG Glut_4
Glut
04 DG-IMN Glut
[-]
038 DG-PIR Ex IMN
[-]
0141 DG-PIR Ex IMN_2
[-]
201_DG-PIR Ex IMN_2
Glut
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[-]
0166 OB-STR-CTX Inh IMN_1
[-]
202_OB-STR-CTX Inh IMN_1
No-NT
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[-]
0166 OB-STR-CTX Inh IMN_1
[-]
203_OB-STR-CTX Inh IMN_1
No-NT
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[-]
0166 OB-STR-CTX Inh IMN_1
[-]
204_OB-STR-CTX Inh IMN_1
No-NT
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[-]
0166 OB-STR-CTX Inh IMN_1
[-]
205_OB-STR-CTX Inh IMN_1
No-NT
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0173 Vip Gaba_1
[-]
206_Vip Gaba_1
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0173 Vip Gaba_1
[-]
207_Vip Gaba_1
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0174 Vip Gaba_2
[-]
208_Vip Gaba_2
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0175 Vip Gaba_3
[-]
209_Vip Gaba_3
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0176 Vip Gaba_4
[-]
210_Vip Gaba_4
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0177 Vip Gaba_5
[-]
211_Vip Gaba_5
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0177 Vip Gaba_5
[-]
212_Vip Gaba_5
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0178 Vip Gaba_6
[-]
213_Vip Gaba_6
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0179 Vip Gaba_7
[-]
214_Vip Gaba_7
GABA
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0181 Vip Gaba_9
[-]
215_Vip Gaba_9
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0185 Sncg Gaba_1
[-]
216_Sncg Gaba_1
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0187 Sncg Gaba_3
[-]
217_Sncg Gaba_3
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0187 Sncg Gaba_3
[-]
218_Sncg Gaba_3
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0187 Sncg Gaba_3
[-]
219_Sncg Gaba_3
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0188 Sncg Gaba_4
[-]
220_Sncg Gaba_4
Glut-GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0190 Sncg Gaba_6
[-]
221_Sncg Gaba_6
GABA
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0192 Sncg Gaba_8
[-]
222_Sncg Gaba_8
GABA
06 CTX-CGE GABA
[-]
048 RHP-COA Ndnf Gaba
[-]
0193 RHP-COA Ndnf Gaba_1
[-]
223_RHP-COA Ndnf Gaba_1
GABA
06 CTX-CGE GABA
[-]
048 RHP-COA Ndnf Gaba
[-]
0198 RHP-COA Ndnf Gaba_6
[-]
224_RHP-COA Ndnf Gaba_6
GABA
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0199 Lamp5 Gaba_1
[-]
225_Lamp5 Gaba_1
GABA
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0199 Lamp5 Gaba_1
[-]
226_Lamp5 Gaba_1
GABA
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0200 Lamp5 Gaba_2
[-]
227_Lamp5 Gaba_2
GABA
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0201 Lamp5 Gaba_3
[-]
228_Lamp5 Gaba_3
GABA
07 CTX-MGE GABA
[-]
050 Lamp5 Lhx6 Gaba
[-]
0203 Lamp5 Lhx6 Gaba_1
[-]
229_Lamp5 Lhx6 Gaba_1
GABA
07 CTX-MGE GABA
[-]
050 Lamp5 Lhx6 Gaba
[-]
0203 Lamp5 Lhx6 Gaba_1
[-]
230_Lamp5 Lhx6 Gaba_1
GABA
07 CTX-MGE GABA
[-]
051 Pvalb chandelier Gaba
[-]
0204 Pvalb chandelier Gaba_1
[-]
231_Pvalb chandelier Gaba_1
GABA
07 CTX-MGE GABA
[-]
051 Pvalb chandelier Gaba
[-]
0204 Pvalb chandelier Gaba_1
[-]
232_Pvalb chandelier Gaba_1
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0205 Pvalb Gaba_1
[-]
233_Pvalb Gaba_1
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0207 Pvalb Gaba_3
[-]
234_Pvalb Gaba_3
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0208 Pvalb Gaba_4
[-]
235_Pvalb Gaba_4
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0209 Pvalb Gaba_5
[-]
236_Pvalb Gaba_5
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0209 Pvalb Gaba_5
[-]
237_Pvalb Gaba_5
GABA
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0212 Pvalb Gaba_8
[-]
238_Pvalb Gaba_8
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0214 Sst Gaba_1
[-]
239_Sst Gaba_1
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0214 Sst Gaba_1
[-]
240_Sst Gaba_1
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0215 Sst Gaba_2
[-]
249_Sst Gaba_2
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0216 Sst Gaba_3
[-]
250_Sst Gaba_3
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0216 Sst Gaba_3
[-]
251_Sst Gaba_3
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0216 Sst Gaba_3
[-]
252_Sst Gaba_3
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0216 Sst Gaba_3
[-]
253_Sst Gaba_3
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0217 Sst Gaba_4
[-]
254_Sst Gaba_4
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0217 Sst Gaba_4
[-]
255_Sst Gaba_4
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0218 Sst Gaba_5
[-]
256_Sst Gaba_5
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0218 Sst Gaba_5
[-]
257_Sst Gaba_5
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0220 Sst Gaba_7
[-]
258_Sst Gaba_7
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0221 Sst Gaba_8
[-]
259_Sst Gaba_8
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0223 Sst Gaba_10
[-]
241_Sst Gaba_10
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0224 Sst Gaba_11
[-]
242_Sst Gaba_11
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0225 Sst Gaba_12
[-]
243_Sst Gaba_12
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0226 Sst Gaba_13
[-]
244_Sst Gaba_13
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0227 Sst Gaba_14
[-]
245_Sst Gaba_14
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0228 Sst Gaba_15
[-]
246_Sst Gaba_15
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0229 Sst Gaba_16
[-]
247_Sst Gaba_16
GABA
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0232 Sst Gaba_19
[-]
248_Sst Gaba_19
GABA
08 CNU-MGE GABA
[-]
054 STR Prox1 Lhx6 Gaba
[-]
0234 STR Prox1 Lhx6 Gaba_2
[-]
260_STR Prox1 Lhx6 Gaba_2
GABA
08 CNU-MGE GABA
[-]
054 STR Prox1 Lhx6 Gaba
[-]
0234 STR Prox1 Lhx6 Gaba_2
[-]
261_STR Prox1 Lhx6 Gaba_2
GABA
08 CNU-MGE GABA
[-]
055 STR Lhx8 Gaba
[-]
0237 STR Lhx8 Gaba_2
[-]
262_STR Lhx8 Gaba_2
GABA
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[-]
0239 Sst Chodl Gaba_2
[-]
263_Sst Chodl Gaba_2
GABA
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[-]
0239 Sst Chodl Gaba_2
[-]
264_Sst Chodl Gaba_2
GABA
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[-]
0241 Sst Chodl Gaba_4
[-]
265_Sst Chodl Gaba_4
GABA
08 CNU-MGE GABA
[-]
058 PAL-STR Gaba-Chol
[-]
0260 PAL-STR Gaba-Chol_2
[-]
267_PAL-STR Gaba-Chol_2
Chol
09 CNU-LGE GABA
[-]
059 GPe-SI Sox6 Cyp26b1 Gaba
[-]
0258 GPe-SI Sox6 Cyp26b1 Gaba_2
[-]
266_GPe-SI Sox6 Cyp26b1 Gaba_2
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0265 STR D1 Gaba_1
[-]
268_STR D1 Gaba_1
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0265 STR D1 Gaba_1
[-]
269_STR D1 Gaba_1
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0266 STR D1 Gaba_2
[-]
270_STR D1 Gaba_2
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0266 STR D1 Gaba_2
[-]
271_STR D1 Gaba_2
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0270 STR D1 Gaba_6
[-]
272_STR D1 Gaba_6
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0272 STR D1 Gaba_8
[-]
273_STR D1 Gaba_8
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0272 STR D1 Gaba_8
[-]
274_STR D1 Gaba_8
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0272 STR D1 Gaba_8
[-]
275_STR D1 Gaba_8
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0273 STR D1 Gaba_9
[-]
276_STR D1 Gaba_9
GABA
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0273 STR D1 Gaba_9
[-]
277_STR D1 Gaba_9
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
278_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
279_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
280_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
281_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
282_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[-]
283_STR D2 Gaba_2
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0276 STR D2 Gaba_3
[-]
284_STR D2 Gaba_3
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0278 STR D2 Gaba_5
[-]
285_STR D2 Gaba_5
GABA
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0279 STR D2 Gaba_6
[-]
286_STR D2 Gaba_6
GABA
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[-]
0282 STR D1 Sema5a Gaba_2
[-]
287_STR D1 Sema5a Gaba_2
GABA
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[-]
0282 STR D1 Sema5a Gaba_2
[-]
288_STR D1 Sema5a Gaba_2
GABA
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[-]
0284 STR D1 Sema5a Gaba_4
[-]
289_STR D1 Sema5a Gaba_4
GABA
11 CNU-HYa GABA
[-]
066 NDB-SI-ant Prdm12 Gaba
[-]
0295 NDB-SI-ant Prdm12 Gaba_1
[-]
290_NDB-SI-ant Prdm12 Gaba_1
GABA
11 CNU-HYa GABA
[-]
066 NDB-SI-ant Prdm12 Gaba
[-]
0295 NDB-SI-ant Prdm12 Gaba_1
[-]
291_NDB-SI-ant Prdm12 Gaba_1
GABA
11 CNU-HYa GABA
[-]
076 MEA-BST Lhx6 Nfib Gaba
[-]
0361 MEA-BST Lhx6 Nfib Gaba_5
[-]
292_MEA-BST Lhx6 Nfib Gaba_5
GABA
11 CNU-HYa GABA
[-]
085 SI-MPO-LPO Lhx8 Gaba
[-]
0398 SI-MPO-LPO Lhx8 Gaba_3
[-]
293_SI-MPO-LPO Lhx8 Gaba_3
GABA
11 CNU-HYa GABA
[-]
086 MPO-ADP Lhx8 Gaba
[-]
0403 MPO-ADP Lhx8 Gaba_2
[-]
294_MPO-ADP Lhx8 Gaba_2
GABA
11 CNU-HYa GABA
[-]
086 MPO-ADP Lhx8 Gaba
[-]
0406 MPO-ADP Lhx8 Gaba_5
[-]
295_MPO-ADP Lhx8 Gaba_5
GABA
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0412 PVR Six3 Sox3 Gaba_2
[-]
296_PVR Six3 Sox3 Gaba_2
GABA
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0412 PVR Six3 Sox3 Gaba_2
[-]
297_PVR Six3 Sox3 Gaba_2
GABA
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0418 PVR Six3 Sox3 Gaba_8
[-]
298_PVR Six3 Sox3 Gaba_8
GABA
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0419 PVR Six3 Sox3 Gaba_9
[-]
299_PVR Six3 Sox3 Gaba_9
GABA
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0420 BST-MPN Six3 Nrgn Gaba_1
[-]
300_BST-MPN Six3 Nrgn Gaba_1
GABA
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0422 BST-MPN Six3 Nrgn Gaba_3
[-]
301_BST-MPN Six3 Nrgn Gaba_3
GABA
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0426 BST-MPN Six3 Nrgn Gaba_7
[-]
302_BST-MPN Six3 Nrgn Gaba_7
GABA
12 HY GABA
[-]
091 ARH-PVi Six6 Dopa-Gaba
[-]
0427 ARH-PVi Six6 Dopa-Gaba_1
[-]
303_ARH-PVi Six6 Dopa-Gaba_1
Dopa
12 HY GABA
[-]
092 TMv-PMv Tbx3 Hist-Gaba
[-]
0429 TMv-PMv Tbx3 Hist-Gaba_1
[-]
304_TMv-PMv Tbx3 Hist-Gaba_1
Hist
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0436 SCH Six6 Cdc14a Gaba_1
[-]
305_SCH Six6 Cdc14a Gaba_1
GABA
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0437 SCH Six6 Cdc14a Gaba_2
[-]
306_SCH Six6 Cdc14a Gaba_2
GABA
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0438 SCH Six6 Cdc14a Gaba_3
[-]
307_SCH Six6 Cdc14a Gaba_3
GABA
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[-]
0439 DMH Prdm13 Gaba_1
[-]
308_DMH Prdm13 Gaba_1
GABA
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[-]
0439 DMH Prdm13 Gaba_1
[-]
309_DMH Prdm13 Gaba_1
GABA
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[-]
0440 DMH Prdm13 Gaba_2
[-]
310_DMH Prdm13 Gaba_2
GABA
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0442 PVHd-SBPV Six3 Prox1 Gaba_1
[-]
311_PVHd-SBPV Six3 Prox1 Gaba_1
GABA
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0443 PVHd-SBPV Six3 Prox1 Gaba_2
[-]
312_PVHd-SBPV Six3 Prox1 Gaba_2
GABA
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0444 PVHd-SBPV Six3 Prox1 Gaba_3
[-]
313_PVHd-SBPV Six3 Prox1 Gaba_3
GABA
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0445 PVHd-SBPV Six3 Prox1 Gaba_4
[-]
314_PVHd-SBPV Six3 Prox1 Gaba_4
GABA
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0447 AHN-SBPV-PVHd Pdrm12 Gaba_2
[-]
315_AHN-SBPV-PVHd Pdrm12 Gaba_2
GABA
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0448 AHN-SBPV-PVHd Pdrm12 Gaba_3
[-]
316_AHN-SBPV-PVHd Pdrm12 Gaba_3
GABA
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0448 AHN-SBPV-PVHd Pdrm12 Gaba_3
[-]
317_AHN-SBPV-PVHd Pdrm12 Gaba_3
GABA
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0449 AHN-SBPV-PVHd Pdrm12 Gaba_4
[-]
318_AHN-SBPV-PVHd Pdrm12 Gaba_4
GABA
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0450 AHN-SBPV-PVHd Pdrm12 Gaba_5
[-]
319_AHN-SBPV-PVHd Pdrm12 Gaba_5
GABA
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0453 SBPV-PVa Six6 Satb2 Gaba_1
[-]
320_SBPV-PVa Six6 Satb2 Gaba_1
GABA
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0453 SBPV-PVa Six6 Satb2 Gaba_1
[-]
321_SBPV-PVa Six6 Satb2 Gaba_1
GABA
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0454 SBPV-PVa Six6 Satb2 Gaba_2
[-]
322_SBPV-PVa Six6 Satb2 Gaba_2
GABA
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0455 SBPV-PVa Six6 Satb2 Gaba_3
[-]
323_SBPV-PVa Six6 Satb2 Gaba_3
GABA
12 HY GABA
[-]
100 AHN Onecut3 Gaba
[-]
0456 AHN Onecut3 Gaba_1
[-]
324_AHN Onecut3 Gaba_1
GABA
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0470 DMH-LHA Gsx1 Gaba_1
[-]
325_DMH-LHA Gsx1 Gaba_1
GABA
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0472 DMH-LHA Gsx1 Gaba_3
[-]
326_DMH-LHA Gsx1 Gaba_3
Chol
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0473 DMH-LHA Gsx1 Gaba_4
[-]
327_DMH-LHA Gsx1 Gaba_4
GABA
12 HY GABA
[-]
103 PVHd-DMH Lhx6 Gaba
[-]
0475 PVHd-DMH Lhx6 Gaba_2
[-]
328_PVHd-DMH Lhx6 Gaba_2
GABA
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0478 TU-ARH Otp Six6 Gaba_1
[-]
329_TU-ARH Otp Six6 Gaba_1
GABA
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0478 TU-ARH Otp Six6 Gaba_1
[-]
330_TU-ARH Otp Six6 Gaba_1
GABA
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0478 TU-ARH Otp Six6 Gaba_1
[-]
331_TU-ARH Otp Six6 Gaba_1
GABA
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0479 TU-ARH Otp Six6 Gaba_2
[-]
332_TU-ARH Otp Six6 Gaba_2
GABA
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0479 TU-ARH Otp Six6 Gaba_2
[-]
333_TU-ARH Otp Six6 Gaba_2
GABA
12 HY GABA
[-]
105 TMd-DMH Foxd2 Gaba
[-]
0481 TMd-DMH Foxd2 Gaba_1
[-]
334_TMd-DMH Foxd2 Gaba_1
GABA
12 HY GABA
[-]
105 TMd-DMH Foxd2 Gaba
[-]
0481 TMd-DMH Foxd2 Gaba_1
[-]
335_TMd-DMH Foxd2 Gaba_1
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0482 PVpo-VMPO-MPN Hmx2 Gaba_1
[-]
336_PVpo-VMPO-MPN Hmx2 Gaba_1
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0482 PVpo-VMPO-MPN Hmx2 Gaba_1
[-]
337_PVpo-VMPO-MPN Hmx2 Gaba_1
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0482 PVpo-VMPO-MPN Hmx2 Gaba_1
[-]
338_PVpo-VMPO-MPN Hmx2 Gaba_1
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0483 PVpo-VMPO-MPN Hmx2 Gaba_2
[-]
339_PVpo-VMPO-MPN Hmx2 Gaba_2
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0483 PVpo-VMPO-MPN Hmx2 Gaba_2
[-]
340_PVpo-VMPO-MPN Hmx2 Gaba_2
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0483 PVpo-VMPO-MPN Hmx2 Gaba_2
[-]
341_PVpo-VMPO-MPN Hmx2 Gaba_2
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0484 PVpo-VMPO-MPN Hmx2 Gaba_3
[-]
342_PVpo-VMPO-MPN Hmx2 Gaba_3
Dopa
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0484 PVpo-VMPO-MPN Hmx2 Gaba_3
[-]
343_PVpo-VMPO-MPN Hmx2 Gaba_3
Dopa
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0486 PVpo-VMPO-MPN Hmx2 Gaba_5
[-]
344_PVpo-VMPO-MPN Hmx2 Gaba_5
GABA
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0486 PVpo-VMPO-MPN Hmx2 Gaba_5
[-]
345_PVpo-VMPO-MPN Hmx2 Gaba_5
Dopa
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0487 DMH Hmx2 Gaba_1
[-]
346_DMH Hmx2 Gaba_1
GABA
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0489 DMH Hmx2 Gaba_3
[-]
347_DMH Hmx2 Gaba_3
Dopa
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0489 DMH Hmx2 Gaba_3
[-]
348_DMH Hmx2 Gaba_3
GABA
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0492 DMH Hmx2 Gaba_6
[-]
349_DMH Hmx2 Gaba_6
GABA
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0493 ARH-PVp Tbx3 Gaba_1
[-]
350_ARH-PVp Tbx3 Gaba_1
GABA
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0494 ARH-PVp Tbx3 Gaba_2
[-]
351_ARH-PVp Tbx3 Gaba_2
GABA
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0495 ARH-PVp Tbx3 Gaba_3
[-]
352_ARH-PVp Tbx3 Gaba_3
GABA
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0495 ARH-PVp Tbx3 Gaba_3
[-]
353_ARH-PVp Tbx3 Gaba_3
GABA
13 CNU-HYa Glut
[-]
111 TRS-BAC Sln Glut
[-]
0502 TRS-BAC Sln Glut_1
[-]
354_TRS-BAC Sln Glut_1
Glut
13 CNU-HYa Glut
[-]
114 COAa-PAA-MEA Barhl2 Glut
[-]
0515 COAa-PAA-MEA Barhl2 Glut_7
[-]
355_COAa-PAA-MEA Barhl2 Glut_7
Glut
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0520 AVPV-MEPO-SFO Tbr1 Glut_2
[-]
356_AVPV-MEPO-SFO Tbr1 Glut_2
Glut
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0521 AVPV-MEPO-SFO Tbr1 Glut_3
[-]
357_AVPV-MEPO-SFO Tbr1 Glut_3
Glut
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0522 AVPV-MEPO-SFO Tbr1 Glut_4
[-]
358_AVPV-MEPO-SFO Tbr1 Glut_4
Glut
13 CNU-HYa Glut
[-]
118 ADP-MPO Trp73 Glut
[-]
0527 ADP-MPO Trp73 Glut_1
[-]
359_ADP-MPO Trp73 Glut_1
Glut
14 HY Glut
[-]
123 DMH Nkx2-4 Glut
[-]
0544 DMH Nkx2-4 Glut_1
[-]
360_DMH Nkx2-4 Glut_1
Glut
14 HY Glut
[-]
123 DMH Nkx2-4 Glut
[-]
0545 DMH Nkx2-4 Glut_2
[-]
361_DMH Nkx2-4 Glut_2
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0546 MPN-MPO-PVpo Hmx2 Glut_1
[-]
362_MPN-MPO-PVpo Hmx2 Glut_1
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0546 MPN-MPO-PVpo Hmx2 Glut_1
[-]
363_MPN-MPO-PVpo Hmx2 Glut_1
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0547 MPN-MPO-PVpo Hmx2 Glut_2
[-]
364_MPN-MPO-PVpo Hmx2 Glut_2
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0548 MPN-MPO-PVpo Hmx2 Glut_3
[-]
365_MPN-MPO-PVpo Hmx2 Glut_3
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0548 MPN-MPO-PVpo Hmx2 Glut_3
[-]
366_MPN-MPO-PVpo Hmx2 Glut_3
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0549 MPN-MPO-PVpo Hmx2 Glut_4
[-]
367_MPN-MPO-PVpo Hmx2 Glut_4
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0550 MPN-MPO-PVpo Hmx2 Glut_5
[-]
368_MPN-MPO-PVpo Hmx2 Glut_5
Glut
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0551 MPN-MPO-PVpo Hmx2 Glut_6
[-]
369_MPN-MPO-PVpo Hmx2 Glut_6
Glut
14 HY Glut
[-]
125 DMH Hmx2 Glut
[-]
0552 DMH Hmx2 Glut_1
[-]
370_DMH Hmx2 Glut_1
Glut
14 HY Glut
[-]
125 DMH Hmx2 Glut
[-]
0552 DMH Hmx2 Glut_1
[-]
371_DMH Hmx2 Glut_1
Glut
14 HY Glut
[-]
125 DMH Hmx2 Glut
[-]
0553 DMH Hmx2 Glut_2
[-]
372_DMH Hmx2 Glut_2
Glut
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0554 ARH-PVp Tbx3 Glut_1
[-]
373_ARH-PVp Tbx3 Glut_1
Glut
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0555 ARH-PVp Tbx3 Glut_2
[-]
374_ARH-PVp Tbx3 Glut_2
Glut-GABA
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0555 ARH-PVp Tbx3 Glut_2
[-]
375_ARH-PVp Tbx3 Glut_2
Glut
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0556 ARH-PVp Tbx3 Glut_3
[-]
376_ARH-PVp Tbx3 Glut_3
Glut
14 HY Glut
[-]
127 DMH-LHA Vgll2 Glut
[-]
0562 DMH-LHA Vgll2 Glut_4
[-]
377_DMH-LHA Vgll2 Glut_4
Glut
14 HY Glut
[-]
128 VMH Fezf1 Glut
[-]
0564 VMH Fezf1 Glut_2
[-]
378_VMH Fezf1 Glut_2
Glut
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0566 VMH Nr5a1 Glut_1
[-]
379_VMH Nr5a1 Glut_1
Glut
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0567 VMH Nr5a1 Glut_2
[-]
380_VMH Nr5a1 Glut_2
Glut
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0568 VMH Nr5a1 Glut_3
[-]
381_VMH Nr5a1 Glut_3
Glut
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0570 VMH Nr5a1 Glut_5
[-]
382_VMH Nr5a1 Glut_5
Glut
14 HY Glut
[-]
131 LHA-AHN-PVH Otp Trh Glut
[-]
0575 LHA-AHN-PVH Otp Trh Glut_2
[-]
383_LHA-AHN-PVH Otp Trh Glut_2
Glut
14 HY Glut
[-]
131 LHA-AHN-PVH Otp Trh Glut
[-]
0577 LHA-AHN-PVH Otp Trh Glut_4
[-]
384_LHA-AHN-PVH Otp Trh Glut_4
Glut
14 HY Glut
[-]
132 AHN-RCH-LHA Otp Fezf1 Glut
[-]
0580 AHN-RCH-LHA Otp Fezf1 Glut_2
[-]
385_AHN-RCH-LHA Otp Fezf1 Glut_2
Glut
14 HY Glut
[-]
132 AHN-RCH-LHA Otp Fezf1 Glut
[-]
0581 AHN-RCH-LHA Otp Fezf1 Glut_3
[-]
386_AHN-RCH-LHA Otp Fezf1 Glut_3
Glut-GABA
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0587 PVH-SO-PVa Otp Glut_3
[-]
387_PVH-SO-PVa Otp Glut_3
Glut
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0587 PVH-SO-PVa Otp Glut_3
[-]
388_PVH-SO-PVa Otp Glut_3
Glut
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0588 PVH-SO-PVa Otp Glut_4
[-]
389_PVH-SO-PVa Otp Glut_4
Glut
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0588 PVH-SO-PVa Otp Glut_4
[-]
390_PVH-SO-PVa Otp Glut_4
Glut
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0589 PVH-SO-PVa Otp Glut_5
[-]
391_PVH-SO-PVa Otp Glut_5
Glut
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0589 PVH-SO-PVa Otp Glut_5
[-]
392_PVH-SO-PVa Otp Glut_5
Glut
14 HY Glut
[-]
134 PH-ant-LHA Otp Bsx Glut
[-]
0595 PH-ant-LHA Otp Bsx Glut_5
[-]
393_PH-ant-LHA Otp Bsx Glut_5
Glut
14 HY Glut
[-]
135 STN-PSTN Pitx2 Glut
[-]
0599 STN-PSTN Pitx2 Glut_2
[-]
394_STN-PSTN Pitx2 Glut_2
Glut
14 HY Glut
[-]
136 PMv-TMv Pitx2 Glut
[-]
0607 PMv-TMv Pitx2 Glut_3
[-]
395_PMv-TMv Pitx2 Glut_3
Glut
14 HY Glut
[-]
137 PH-an Pitx2 Glut
[-]
0608 PH-an Pitx2 Glut_1
[-]
396_PH-an Pitx2 Glut_1
Glut
14 HY Glut
[-]
138 PH Pitx2 Glut
[-]
0610 PH Pitx2 Glut_1
[-]
397_PH Pitx2 Glut_1
Glut
14 HY Glut
[-]
138 PH Pitx2 Glut
[-]
0611 PH Pitx2 Glut_2
[-]
398_PH Pitx2 Glut_2
Glut
14 HY Glut
[-]
140 PMd-LHA Foxb1 Glut
[-]
0620 PMd-LHA Foxb1 Glut_2
[-]
399_PMd-LHA Foxb1 Glut_2
Glut
14 HY Glut
[-]
140 PMd-LHA Foxb1 Glut
[-]
0620 PMd-LHA Foxb1 Glut_2
[-]
400_PMd-LHA Foxb1 Glut_2
Glut
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0623 PH-SUM Foxa1 Glut_2
[-]
401_PH-SUM Foxa1 Glut_2
Glut
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0626 PH-SUM Foxa1 Glut_5
[-]
402_PH-SUM Foxa1 Glut_5
Glut
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0627 PH-SUM Foxa1 Glut_6
[-]
403_PH-SUM Foxa1 Glut_6
Glut
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0627 PH-SUM Foxa1 Glut_6
[-]
404_PH-SUM Foxa1 Glut_6
Glut
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[-]
0629 MM-ant Foxb1 Glut_1
[-]
405_MM-ant Foxb1 Glut_1
Glut
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[-]
0629 MM-ant Foxb1 Glut_1
[-]
406_MM-ant Foxb1 Glut_1
Glut
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[-]
0629 MM-ant Foxb1 Glut_1
[-]
407_MM-ant Foxb1 Glut_1
Glut
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[-]
0629 MM-ant Foxb1 Glut_1
[-]
408_MM-ant Foxb1 Glut_1
Glut
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[-]
0630 MM Foxb1 Glut_1
[-]
409_MM Foxb1 Glut_1
Glut
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[-]
0631 MM Foxb1 Glut_2
[-]
410_MM Foxb1 Glut_2
Glut
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[-]
0631 MM Foxb1 Glut_2
[-]
411_MM Foxb1 Glut_2
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0676 PRC-PAG Pax6 Glut_1
[-]
412_PRC-PAG Pax6 Glut_1
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0676 PRC-PAG Pax6 Glut_1
[-]
413_PRC-PAG Pax6 Glut_1
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0677 PRC-PAG Pax6 Glut_2
[-]
414_PRC-PAG Pax6 Glut_2
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0677 PRC-PAG Pax6 Glut_2
[-]
415_PRC-PAG Pax6 Glut_2
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0678 PRC-PAG Pax6 Glut_3
[-]
416_PRC-PAG Pax6 Glut_3
Glut
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0678 PRC-PAG Pax6 Glut_3
[-]
417_PRC-PAG Pax6 Glut_3
Glut
19 MB Glut
[-]
156 MB-ant-ve Dmrta2 Glut
[-]
0681 MB-ant-ve Dmrta2 Glut_1
[-]
418_MB-ant-ve Dmrta2 Glut_1
Glut
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0685 IF-RL-CLI-PAG Foxa1 Glut_1
[-]
419_IF-RL-CLI-PAG Foxa1 Glut_1
Glut
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0686 IF-RL-CLI-PAG Foxa1 Glut_2
[-]
420_IF-RL-CLI-PAG Foxa1 Glut_2
Glut
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0686 IF-RL-CLI-PAG Foxa1 Glut_2
[-]
421_IF-RL-CLI-PAG Foxa1 Glut_2
Glut
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0687 IF-RL-CLI-PAG Foxa1 Glut_3
[-]
422_IF-RL-CLI-PAG Foxa1 Glut_3
Glut
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0688 IF-RL-CLI-PAG Foxa1 Glut_4
[-]
423_IF-RL-CLI-PAG Foxa1 Glut_4
Dopa
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0688 IF-RL-CLI-PAG Foxa1 Glut_4
[-]
424_IF-RL-CLI-PAG Foxa1 Glut_4
Dopa
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0688 IF-RL-CLI-PAG Foxa1 Glut_4
[-]
425_IF-RL-CLI-PAG Foxa1 Glut_4
Glut
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0691 PAG-SC Neurod2 Meis2 Glut_2
[-]
426_PAG-SC Neurod2 Meis2 Glut_2
Glut
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0693 PAG-SC Neurod2 Meis2 Glut_4
[-]
427_PAG-SC Neurod2 Meis2 Glut_4
Glut
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0693 PAG-SC Neurod2 Meis2 Glut_4
[-]
428_PAG-SC Neurod2 Meis2 Glut_4
Glut
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0693 PAG-SC Neurod2 Meis2 Glut_4
[-]
429_PAG-SC Neurod2 Meis2 Glut_4
Glut
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0693 PAG-SC Neurod2 Meis2 Glut_4
[-]
430_PAG-SC Neurod2 Meis2 Glut_4
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
431_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
432_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
433_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
434_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
435_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[-]
436_PAG Pou4f3 Glut_1
Glut
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0695 PAG Pou4f3 Glut_2
[-]
437_PAG Pou4f3 Glut_2
Glut
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0697 CUN Evx2 Lhx2 Glut_1
[-]
438_CUN Evx2 Lhx2 Glut_1
Glut
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0697 CUN Evx2 Lhx2 Glut_1
[-]
439_CUN Evx2 Lhx2 Glut_1
Glut
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0698 CUN Evx2 Lhx2 Glut_2
[-]
440_CUN Evx2 Lhx2 Glut_2
Glut
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0700 CUN Evx2 Lhx2 Glut_4
[-]
441_CUN Evx2 Lhx2 Glut_4
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
442_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
443_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
444_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
445_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
446_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[-]
447_PAG-MRN Pou3f1 Glut_1
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0705 PAG-MRN Pou3f1 Glut_2
[-]
448_PAG-MRN Pou3f1 Glut_2
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0706 PAG-MRN Pou3f1 Glut_3
[-]
449_PAG-MRN Pou3f1 Glut_3
Glut
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0709 PAG-MRN Pou3f1 Glut_6
[-]
450_PAG-MRN Pou3f1 Glut_6
Glut
19 MB Glut
[-]
166 MRN Pou3f1 C1ql4 Glut
[-]
0710 MRN Pou3f1 C1ql4 Glut_1
[-]
451_MRN Pou3f1 C1ql4 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[-]
452_PRC-PAG Tcf7l2 Irx2 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[-]
453_PRC-PAG Tcf7l2 Irx2 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[-]
454_PRC-PAG Tcf7l2 Irx2 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[-]
455_PRC-PAG Tcf7l2 Irx2 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[-]
456_PRC-PAG Tcf7l2 Irx2 Glut_1
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0714 PRC-PAG Tcf7l2 Irx2 Glut_2
[-]
457_PRC-PAG Tcf7l2 Irx2 Glut_2
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0714 PRC-PAG Tcf7l2 Irx2 Glut_2
[-]
458_PRC-PAG Tcf7l2 Irx2 Glut_2
Glut
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0714 PRC-PAG Tcf7l2 Irx2 Glut_2
[-]
459_PRC-PAG Tcf7l2 Irx2 Glut_2
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
460_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
461_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
462_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
463_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
464_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[-]
465_PAG-SC Pou4f1 Zic1 Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
466_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
467_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
468_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
469_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
470_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
471_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
472_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
473_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[-]
474_PAG-MRN Tfap2b Glut_1
Glut
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0735 PAG Pou4f1 Bnc2 Glut_1
[-]
475_PAG Pou4f1 Bnc2 Glut_1
Glut
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0736 PAG Pou4f1 Bnc2 Glut_2
[-]
476_PAG Pou4f1 Bnc2 Glut_2
Glut
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0736 PAG Pou4f1 Bnc2 Glut_2
[-]
477_PAG Pou4f1 Bnc2 Glut_2
Glut
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0736 PAG Pou4f1 Bnc2 Glut_2
[-]
478_PAG Pou4f1 Bnc2 Glut_2
Glut
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0736 PAG Pou4f1 Bnc2 Glut_2
[-]
479_PAG Pou4f1 Bnc2 Glut_2
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0737 PAG Pou4f1 Ebf2 Glut_1
[-]
480_PAG Pou4f1 Ebf2 Glut_1
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0737 PAG Pou4f1 Ebf2 Glut_1
[-]
481_PAG Pou4f1 Ebf2 Glut_1
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0737 PAG Pou4f1 Ebf2 Glut_1
[-]
482_PAG Pou4f1 Ebf2 Glut_1
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0737 PAG Pou4f1 Ebf2 Glut_1
[-]
483_PAG Pou4f1 Ebf2 Glut_1
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0738 PAG Pou4f1 Ebf2 Glut_2
[-]
484_PAG Pou4f1 Ebf2 Glut_2
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0738 PAG Pou4f1 Ebf2 Glut_2
[-]
485_PAG Pou4f1 Ebf2 Glut_2
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0738 PAG Pou4f1 Ebf2 Glut_2
[-]
486_PAG Pou4f1 Ebf2 Glut_2
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0738 PAG Pou4f1 Ebf2 Glut_2
[-]
487_PAG Pou4f1 Ebf2 Glut_2
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0739 PAG Pou4f1 Ebf2 Glut_3
[-]
488_PAG Pou4f1 Ebf2 Glut_3
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0739 PAG Pou4f1 Ebf2 Glut_3
[-]
489_PAG Pou4f1 Ebf2 Glut_3
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0739 PAG Pou4f1 Ebf2 Glut_3
[-]
490_PAG Pou4f1 Ebf2 Glut_3
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0739 PAG Pou4f1 Ebf2 Glut_3
[-]
491_PAG Pou4f1 Ebf2 Glut_3
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[-]
492_PAG Pou4f1 Ebf2 Glut_4
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[-]
493_PAG Pou4f1 Ebf2 Glut_4
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[-]
494_PAG Pou4f1 Ebf2 Glut_4
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[-]
495_PAG Pou4f1 Ebf2 Glut_4
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[-]
496_PAG Pou4f1 Ebf2 Glut_4
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0741 PAG Pou4f1 Ebf2 Glut_5
[-]
497_PAG Pou4f1 Ebf2 Glut_5
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0741 PAG Pou4f1 Ebf2 Glut_5
[-]
498_PAG Pou4f1 Ebf2 Glut_5
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0742 PAG Pou4f1 Ebf2 Glut_6
[-]
499_PAG Pou4f1 Ebf2 Glut_6
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0742 PAG Pou4f1 Ebf2 Glut_6
[-]
500_PAG Pou4f1 Ebf2 Glut_6
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0743 PAG Pou4f1 Ebf2 Glut_7
[-]
501_PAG Pou4f1 Ebf2 Glut_7
Glut
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0743 PAG Pou4f1 Ebf2 Glut_7
[-]
502_PAG Pou4f1 Ebf2 Glut_7
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
503_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
504_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
505_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
506_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
507_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[-]
508_PAG Pou4f2 Glut_1
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0746 PAG Pou4f2 Glut_2
[-]
509_PAG Pou4f2 Glut_2
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0746 PAG Pou4f2 Glut_2
[-]
510_PAG Pou4f2 Glut_2
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0746 PAG Pou4f2 Glut_2
[-]
511_PAG Pou4f2 Glut_2
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0746 PAG Pou4f2 Glut_2
[-]
512_PAG Pou4f2 Glut_2
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0747 PAG Pou4f2 Glut_3
[-]
513_PAG Pou4f2 Glut_3
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0747 PAG Pou4f2 Glut_3
[-]
514_PAG Pou4f2 Glut_3
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0747 PAG Pou4f2 Glut_3
[-]
515_PAG Pou4f2 Glut_3
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0748 PAG Pou4f2 Glut_4
[-]
516_PAG Pou4f2 Glut_4
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0748 PAG Pou4f2 Glut_4
[-]
517_PAG Pou4f2 Glut_4
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0749 PAG Pou4f2 Glut_5
[-]
518_PAG Pou4f2 Glut_5
Glut
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0749 PAG Pou4f2 Glut_5
[-]
519_PAG Pou4f2 Glut_5
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0750 PAG Pou4f2 Mesi2 Glut_1
[-]
520_PAG Pou4f2 Mesi2 Glut_1
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0750 PAG Pou4f2 Mesi2 Glut_1
[-]
521_PAG Pou4f2 Mesi2 Glut_1
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0750 PAG Pou4f2 Mesi2 Glut_1
[-]
522_PAG Pou4f2 Mesi2 Glut_1
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
523_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
524_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
525_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
526_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
527_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[-]
528_PAG Pou4f2 Mesi2 Glut_2
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0752 PAG Pou4f2 Mesi2 Glut_3
[-]
529_PAG Pou4f2 Mesi2 Glut_3
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0752 PAG Pou4f2 Mesi2 Glut_3
[-]
530_PAG Pou4f2 Mesi2 Glut_3
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0752 PAG Pou4f2 Mesi2 Glut_3
[-]
531_PAG Pou4f2 Mesi2 Glut_3
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0752 PAG Pou4f2 Mesi2 Glut_3
[-]
532_PAG Pou4f2 Mesi2 Glut_3
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0754 PAG Pou4f2 Mesi2 Glut_5
[-]
533_PAG Pou4f2 Mesi2 Glut_5
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0755 PAG Pou4f2 Mesi2 Glut_6
[-]
534_PAG Pou4f2 Mesi2 Glut_6
Glut
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0755 PAG Pou4f2 Mesi2 Glut_6
[-]
535_PAG Pou4f2 Mesi2 Glut_6
Glut
19 MB Glut
[-]
176 SCig Foxb1 Glut
[-]
0763 SCig Foxb1 Glut_4
[-]
536_SCig Foxb1 Glut_4
Glut
19 MB Glut
[-]
179 SCdg-PAG Tfap2b Glut
[-]
0766 SCdg-PAG Tfap2b Glut_1
[-]
537_SCdg-PAG Tfap2b Glut_1
Glut
19 MB Glut
[-]
179 SCdg-PAG Tfap2b Glut
[-]
0766 SCdg-PAG Tfap2b Glut_1
[-]
538_SCdg-PAG Tfap2b Glut_1
Glut
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0777 CUN-PPN Evx2 Meis2 Glut_2
[-]
539_CUN-PPN Evx2 Meis2 Glut_2
Glut
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0778 CUN-PPN Evx2 Meis2 Glut_3
[-]
540_CUN-PPN Evx2 Meis2 Glut_3
Chol
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0779 CUN-PPN Evx2 Meis2 Glut_4
[-]
541_CUN-PPN Evx2 Meis2 Glut_4
Dopa
19 MB Glut
[-]
190 ND-INC Foxd2 Glut
[-]
0790 ND-INC Foxd2 Glut_1
[-]
542_ND-INC Foxd2 Glut_1
Glut
20 MB GABA
[-]
191 PAG-MRN Rln3 Gaba
[-]
0791 PAG-MRN Rln3 Gaba_1
[-]
543_PAG-MRN Rln3 Gaba_1
GABA
20 MB GABA
[-]
192 PPN-CUN-PCG Otp En1 Gaba
[-]
0792 PPN-CUN-PCG Otp En1 Gaba_1
[-]
544_PPN-CUN-PCG Otp En1 Gaba_1
GABA
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[-]
0795 MRN-PPN-CUN Pax8 Gaba_1
[-]
545_MRN-PPN-CUN Pax8 Gaba_1
GABA
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[-]
0796 MRN-PPN-CUN Pax8 Gaba_2
[-]
546_MRN-PPN-CUN Pax8 Gaba_2
GABA
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[-]
0796 MRN-PPN-CUN Pax8 Gaba_2
[-]
547_MRN-PPN-CUN Pax8 Gaba_2
GABA
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[-]
0798 MRN-VTN-PPN Pax5 Cdh23 Gaba_1
[-]
548_MRN-VTN-PPN Pax5 Cdh23 Gaba_1
GABA
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[-]
0799 MRN-VTN-PPN Pax5 Cdh23 Gaba_2
[-]
549_MRN-VTN-PPN Pax5 Cdh23 Gaba_2
GABA
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[-]
0799 MRN-VTN-PPN Pax5 Cdh23 Gaba_2
[-]
550_MRN-VTN-PPN Pax5 Cdh23 Gaba_2
GABA
20 MB GABA
[-]
195 SNr-VTA Pax5 Npas1 Gaba
[-]
0800 SNr-VTA Pax5 Npas1 Gaba_1
[-]
551_SNr-VTA Pax5 Npas1 Gaba_1
GABA
20 MB GABA
[-]
195 SNr-VTA Pax5 Npas1 Gaba
[-]
0800 SNr-VTA Pax5 Npas1 Gaba_1
[-]
552_SNr-VTA Pax5 Npas1 Gaba_1
GABA
20 MB GABA
[-]
195 SNr-VTA Pax5 Npas1 Gaba
[-]
0800 SNr-VTA Pax5 Npas1 Gaba_1
[-]
553_SNr-VTA Pax5 Npas1 Gaba_1
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0802 PAG-PPN Pax5 Sox21 Gaba_1
[-]
554_PAG-PPN Pax5 Sox21 Gaba_1
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0802 PAG-PPN Pax5 Sox21 Gaba_1
[-]
555_PAG-PPN Pax5 Sox21 Gaba_1
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0802 PAG-PPN Pax5 Sox21 Gaba_1
[-]
556_PAG-PPN Pax5 Sox21 Gaba_1
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0803 PAG-PPN Pax5 Sox21 Gaba_2
[-]
557_PAG-PPN Pax5 Sox21 Gaba_2
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0803 PAG-PPN Pax5 Sox21 Gaba_2
[-]
558_PAG-PPN Pax5 Sox21 Gaba_2
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0803 PAG-PPN Pax5 Sox21 Gaba_2
[-]
559_PAG-PPN Pax5 Sox21 Gaba_2
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0804 PAG-PPN Pax5 Sox21 Gaba_3
[-]
560_PAG-PPN Pax5 Sox21 Gaba_3
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0805 PAG-PPN Pax5 Sox21 Gaba_4
[-]
561_PAG-PPN Pax5 Sox21 Gaba_4
GABA
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0805 PAG-PPN Pax5 Sox21 Gaba_4
[-]
562_PAG-PPN Pax5 Sox21 Gaba_4
GABA
20 MB GABA
[-]
197 SNr Six3 Gaba
[-]
0806 SNr Six3 Gaba_1
[-]
563_SNr Six3 Gaba_1
GABA
20 MB GABA
[-]
197 SNr Six3 Gaba
[-]
0806 SNr Six3 Gaba_1
[-]
564_SNr Six3 Gaba_1
GABA
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0808 IC Six3 En2 Gaba_2
[-]
565_IC Six3 En2 Gaba_2
GABA
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0808 IC Six3 En2 Gaba_2
[-]
566_IC Six3 En2 Gaba_2
GABA
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0808 IC Six3 En2 Gaba_2
[-]
567_IC Six3 En2 Gaba_2
GABA
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0812 IC Six3 En2 Gaba_6
[-]
568_IC Six3 En2 Gaba_6
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0814 PAG-MRN-RN Foxa2 Gaba_1
[-]
569_PAG-MRN-RN Foxa2 Gaba_1
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0814 PAG-MRN-RN Foxa2 Gaba_1
[-]
570_PAG-MRN-RN Foxa2 Gaba_1
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0815 PAG-MRN-RN Foxa2 Gaba_2
[-]
571_PAG-MRN-RN Foxa2 Gaba_2
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0816 PAG-MRN-RN Foxa2 Gaba_3
[-]
572_PAG-MRN-RN Foxa2 Gaba_3
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0817 PAG-MRN-RN Foxa2 Gaba_4
[-]
573_PAG-MRN-RN Foxa2 Gaba_4
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0817 PAG-MRN-RN Foxa2 Gaba_4
[-]
574_PAG-MRN-RN Foxa2 Gaba_4
GABA
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0817 PAG-MRN-RN Foxa2 Gaba_4
[-]
575_PAG-MRN-RN Foxa2 Gaba_4
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0818 PAG-ND-PCG Onecut1 Gaba_1
[-]
576_PAG-ND-PCG Onecut1 Gaba_1
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0818 PAG-ND-PCG Onecut1 Gaba_1
[-]
577_PAG-ND-PCG Onecut1 Gaba_1
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0819 PAG-ND-PCG Onecut1 Gaba_2
[-]
578_PAG-ND-PCG Onecut1 Gaba_2
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0819 PAG-ND-PCG Onecut1 Gaba_2
[-]
579_PAG-ND-PCG Onecut1 Gaba_2
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0819 PAG-ND-PCG Onecut1 Gaba_2
[-]
580_PAG-ND-PCG Onecut1 Gaba_2
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0820 PAG-ND-PCG Onecut1 Gaba_3
[-]
581_PAG-ND-PCG Onecut1 Gaba_3
GABA
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0821 PAG-ND-PCG Onecut1 Gaba_4
[-]
582_PAG-ND-PCG Onecut1 Gaba_4
GABA
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0824 PAG-RN Nkx2-2 Otx1 Gaba_2
[-]
583_PAG-RN Nkx2-2 Otx1 Gaba_2
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0824 PAG-RN Nkx2-2 Otx1 Gaba_2
[-]
584_PAG-RN Nkx2-2 Otx1 Gaba_2
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
585_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
586_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
587_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
588_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
589_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[-]
590_PAG-RN Nkx2-2 Otx1 Gaba_3
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0826 PAG-RN Nkx2-2 Otx1 Gaba_4
[-]
591_PAG-RN Nkx2-2 Otx1 Gaba_4
GABA-Glyc
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0827 PAG-RN Nkx2-2 Otx1 Gaba_5
[-]
592_PAG-RN Nkx2-2 Otx1 Gaba_5
GABA
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0828 PAG-RN Nkx2-2 Otx1 Gaba_6
[-]
593_PAG-RN Nkx2-2 Otx1 Gaba_6
GABA
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[-]
0829 PRT Tcf7l2 Gaba_1
[-]
594_PRT Tcf7l2 Gaba_1
GABA
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[-]
0829 PRT Tcf7l2 Gaba_1
[-]
595_PRT Tcf7l2 Gaba_1
GABA
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[-]
0829 PRT Tcf7l2 Gaba_1
[-]
596_PRT Tcf7l2 Gaba_1
GABA
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[-]
0829 PRT Tcf7l2 Gaba_1
[-]
597_PRT Tcf7l2 Gaba_1
GABA
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[-]
0844 SC-PAG Lef1 Emx2 Gaba_2
[-]
598_SC-PAG Lef1 Emx2 Gaba_2
GABA
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[-]
0844 SC-PAG Lef1 Emx2 Gaba_2
[-]
599_SC-PAG Lef1 Emx2 Gaba_2
GABA
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[-]
0846 SC-PAG Lef1 Emx2 Gaba_4
[-]
600_SC-PAG Lef1 Emx2 Gaba_4
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[-]
601_SCm-PAG Cdh23 Gaba_1
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[-]
602_SCm-PAG Cdh23 Gaba_1
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[-]
603_SCm-PAG Cdh23 Gaba_1
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[-]
604_SCm-PAG Cdh23 Gaba_1
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[-]
605_SCm-PAG Cdh23 Gaba_1
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0850 SCm-PAG Cdh23 Gaba_3
[-]
606_SCm-PAG Cdh23 Gaba_3
GABA
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0850 SCm-PAG Cdh23 Gaba_3
[-]
607_SCm-PAG Cdh23 Gaba_3
GABA
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0877 IPN Otp Crisp1 Gaba_1
[-]
608_IPN Otp Crisp1 Gaba_1
GABA
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0877 IPN Otp Crisp1 Gaba_1
[-]
609_IPN Otp Crisp1 Gaba_1
GABA
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0878 IPN Otp Crisp1 Gaba_2
[-]
610_IPN Otp Crisp1 Gaba_2
GABA
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0878 IPN Otp Crisp1 Gaba_2
[-]
611_IPN Otp Crisp1 Gaba_2
GABA
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0879 IPN Otp Crisp1 Gaba_3
[-]
612_IPN Otp Crisp1 Gaba_3
GABA
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0880 SNc-VTA-RAmb Foxa1 Dopa_1
[-]
613_SNc-VTA-RAmb Foxa1 Dopa_1
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0880 SNc-VTA-RAmb Foxa1 Dopa_1
[-]
614_SNc-VTA-RAmb Foxa1 Dopa_1
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0881 SNc-VTA-RAmb Foxa1 Dopa_2
[-]
615_SNc-VTA-RAmb Foxa1 Dopa_2
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0881 SNc-VTA-RAmb Foxa1 Dopa_2
[-]
616_SNc-VTA-RAmb Foxa1 Dopa_2
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0882 SNc-VTA-RAmb Foxa1 Dopa_3
[-]
617_SNc-VTA-RAmb Foxa1 Dopa_3
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0882 SNc-VTA-RAmb Foxa1 Dopa_3
[-]
618_SNc-VTA-RAmb Foxa1 Dopa_3
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0882 SNc-VTA-RAmb Foxa1 Dopa_3
[-]
619_SNc-VTA-RAmb Foxa1 Dopa_3
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0883 SNc-VTA-RAmb Foxa1 Dopa_4
[-]
620_SNc-VTA-RAmb Foxa1 Dopa_4
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0883 SNc-VTA-RAmb Foxa1 Dopa_4
[-]
621_SNc-VTA-RAmb Foxa1 Dopa_4
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0883 SNc-VTA-RAmb Foxa1 Dopa_4
[-]
622_SNc-VTA-RAmb Foxa1 Dopa_4
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0883 SNc-VTA-RAmb Foxa1 Dopa_4
[-]
623_SNc-VTA-RAmb Foxa1 Dopa_4
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0884 SNc-VTA-RAmb Foxa1 Dopa_5
[-]
624_SNc-VTA-RAmb Foxa1 Dopa_5
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0884 SNc-VTA-RAmb Foxa1 Dopa_5
[-]
625_SNc-VTA-RAmb Foxa1 Dopa_5
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0885 SNc-VTA-RAmb Foxa1 Dopa_6
[-]
626_SNc-VTA-RAmb Foxa1 Dopa_6
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0886 SNc-VTA-RAmb Foxa1 Dopa_7
[-]
627_SNc-VTA-RAmb Foxa1 Dopa_7
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0887 SNc-VTA-RAmb Foxa1 Dopa_8
[-]
628_SNc-VTA-RAmb Foxa1 Dopa_8
Dopa
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0887 SNc-VTA-RAmb Foxa1 Dopa_8
[-]
629_SNc-VTA-RAmb Foxa1 Dopa_8
Glut-GABA
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0888 MB-MY Tph2 Glut-Sero_1
[-]
630_MB-MY Tph2 Glut-Sero_1
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0888 MB-MY Tph2 Glut-Sero_1
[-]
631_MB-MY Tph2 Glut-Sero_1
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0888 MB-MY Tph2 Glut-Sero_1
[-]
632_MB-MY Tph2 Glut-Sero_1
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0888 MB-MY Tph2 Glut-Sero_1
[-]
633_MB-MY Tph2 Glut-Sero_1
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0889 MB-MY Tph2 Glut-Sero_2
[-]
634_MB-MY Tph2 Glut-Sero_2
Glut
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0889 MB-MY Tph2 Glut-Sero_2
[-]
635_MB-MY Tph2 Glut-Sero_2
Glut
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0890 MB-MY Tph2 Glut-Sero_3
[-]
636_MB-MY Tph2 Glut-Sero_3
Glut
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0890 MB-MY Tph2 Glut-Sero_3
[-]
637_MB-MY Tph2 Glut-Sero_3
Glut
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0891 MB-MY Tph2 Glut-Sero_4
[-]
638_MB-MY Tph2 Glut-Sero_4
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0891 MB-MY Tph2 Glut-Sero_4
[-]
639_MB-MY Tph2 Glut-Sero_4
Sero
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0892 MB-MY Tph2 Glut-Sero_5
[-]
640_MB-MY Tph2 Glut-Sero_5
Glut
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0893 MB-MY Tph2 Glut-Sero_6
[-]
641_MB-MY Tph2 Glut-Sero_6
Sero
23 P Glut
[-]
220 PB Pax5 Glut
[-]
0904 PB Pax5 Glut_1
[-]
642_PB Pax5 Glut_1
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0906 LDT-PCG Vsx2 Lhx4 Glut_1
[-]
643_LDT-PCG Vsx2 Lhx4 Glut_1
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0906 LDT-PCG Vsx2 Lhx4 Glut_1
[-]
644_LDT-PCG Vsx2 Lhx4 Glut_1
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0906 LDT-PCG Vsx2 Lhx4 Glut_1
[-]
645_LDT-PCG Vsx2 Lhx4 Glut_1
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0907 LDT-PCG Vsx2 Lhx4 Glut_2
[-]
646_LDT-PCG Vsx2 Lhx4 Glut_2
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0907 LDT-PCG Vsx2 Lhx4 Glut_2
[-]
647_LDT-PCG Vsx2 Lhx4 Glut_2
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0907 LDT-PCG Vsx2 Lhx4 Glut_2
[-]
648_LDT-PCG Vsx2 Lhx4 Glut_2
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0908 LDT-PCG Vsx2 Lhx4 Glut_3
[-]
649_LDT-PCG Vsx2 Lhx4 Glut_3
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0908 LDT-PCG Vsx2 Lhx4 Glut_3
[-]
650_LDT-PCG Vsx2 Lhx4 Glut_3
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0908 LDT-PCG Vsx2 Lhx4 Glut_3
[-]
651_LDT-PCG Vsx2 Lhx4 Glut_3
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0909 LDT-PCG Vsx2 Lhx4 Glut_4
[-]
652_LDT-PCG Vsx2 Lhx4 Glut_4
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0909 LDT-PCG Vsx2 Lhx4 Glut_4
[-]
653_LDT-PCG Vsx2 Lhx4 Glut_4
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0909 LDT-PCG Vsx2 Lhx4 Glut_4
[-]
654_LDT-PCG Vsx2 Lhx4 Glut_4
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0909 LDT-PCG Vsx2 Lhx4 Glut_4
[-]
655_LDT-PCG Vsx2 Lhx4 Glut_4
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0910 LDT-PCG Vsx2 Lhx4 Glut_5
[-]
656_LDT-PCG Vsx2 Lhx4 Glut_5
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0911 LDT-PCG Vsx2 Lhx4 Glut_6
[-]
657_LDT-PCG Vsx2 Lhx4 Glut_6
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0912 LDT-PCG Vsx2 Lhx4 Glut_7
[-]
658_LDT-PCG Vsx2 Lhx4 Glut_7
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0912 LDT-PCG Vsx2 Lhx4 Glut_7
[-]
659_LDT-PCG Vsx2 Lhx4 Glut_7
Glut
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0912 LDT-PCG Vsx2 Lhx4 Glut_7
[-]
660_LDT-PCG Vsx2 Lhx4 Glut_7
Glut
23 P Glut
[-]
223 B-PB Nr4a2 Glut
[-]
0923 B-PB Nr4a2 Glut_1
[-]
661_B-PB Nr4a2 Glut_1
Glut
23 P Glut
[-]
223 B-PB Nr4a2 Glut
[-]
0923 B-PB Nr4a2 Glut_1
[-]
662_B-PB Nr4a2 Glut_1
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0925 PCG-PRNr Vsx2 Nkx6-1 Glut_1
[-]
663_PCG-PRNr Vsx2 Nkx6-1 Glut_1
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0926 PCG-PRNr Vsx2 Nkx6-1 Glut_2
[-]
664_PCG-PRNr Vsx2 Nkx6-1 Glut_2
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0926 PCG-PRNr Vsx2 Nkx6-1 Glut_2
[-]
665_PCG-PRNr Vsx2 Nkx6-1 Glut_2
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0926 PCG-PRNr Vsx2 Nkx6-1 Glut_2
[-]
666_PCG-PRNr Vsx2 Nkx6-1 Glut_2
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0927 PCG-PRNr Vsx2 Nkx6-1 Glut_3
[-]
667_PCG-PRNr Vsx2 Nkx6-1 Glut_3
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0927 PCG-PRNr Vsx2 Nkx6-1 Glut_3
[-]
668_PCG-PRNr Vsx2 Nkx6-1 Glut_3
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0927 PCG-PRNr Vsx2 Nkx6-1 Glut_3
[-]
669_PCG-PRNr Vsx2 Nkx6-1 Glut_3
Glut
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0928 PCG-PRNr Vsx2 Nkx6-1 Glut_4
[-]
670_PCG-PRNr Vsx2 Nkx6-1 Glut_4
Glut
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0931 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_1
[-]
671_PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_1
Glut
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0931 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_1
[-]
672_PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_1
Glut
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0932 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_2
[-]
673_PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_2
Glut
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0932 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_2
[-]
674_PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_2
Glut
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0933 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_3
[-]
675_PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_3
Glut
23 P Glut
[-]
226 PRNc-PARN Tlx1 Glut
[-]
0935 PRNc-PARN Tlx1 Glut_1
[-]
676_PRNc-PARN Tlx1 Glut_1
Glut
23 P Glut
[-]
230 PRNr Otp Nfib Glut
[-]
0945 PRNr Otp Nfib Glut_1
[-]
677_PRNr Otp Nfib Glut_1
Glut
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0946 IPN-LDT Vsx2 Nkx6-1 Glut_1
[-]
678_IPN-LDT Vsx2 Nkx6-1 Glut_1
Glut
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0946 IPN-LDT Vsx2 Nkx6-1 Glut_1
[-]
679_IPN-LDT Vsx2 Nkx6-1 Glut_1
Glut
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0947 IPN-LDT Vsx2 Nkx6-1 Glut_2
[-]
680_IPN-LDT Vsx2 Nkx6-1 Glut_2
Glut
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0947 IPN-LDT Vsx2 Nkx6-1 Glut_2
[-]
681_IPN-LDT Vsx2 Nkx6-1 Glut_2
Glut
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0948 LDT Vsx2 Nkx6-1 Nfib Glut_1
[-]
682_LDT Vsx2 Nkx6-1 Nfib Glut_1
Glut
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0948 LDT Vsx2 Nkx6-1 Nfib Glut_1
[-]
683_LDT Vsx2 Nkx6-1 Nfib Glut_1
Glut
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0948 LDT Vsx2 Nkx6-1 Nfib Glut_1
[-]
684_LDT Vsx2 Nkx6-1 Nfib Glut_1
Glut
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0948 LDT Vsx2 Nkx6-1 Nfib Glut_1
[-]
685_LDT Vsx2 Nkx6-1 Nfib Glut_1
Glut
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0949 LDT Vsx2 Nkx6-1 Nfib Glut_2
[-]
686_LDT Vsx2 Nkx6-1 Nfib Glut_2
Glut
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[-]
0953 PG-TRN-LRN Fat2 Glut_1
[-]
687_PG-TRN-LRN Fat2 Glut_1
Glut
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[-]
0953 PG-TRN-LRN Fat2 Glut_1
[-]
688_PG-TRN-LRN Fat2 Glut_1
Glut
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[-]
0953 PG-TRN-LRN Fat2 Glut_1
[-]
689_PG-TRN-LRN Fat2 Glut_1
Glut
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[-]
0953 PG-TRN-LRN Fat2 Glut_1
[-]
690_PG-TRN-LRN Fat2 Glut_1
Glut
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0956 PRP-NI-PRNc-GRN Otp Glut_2
[-]
691_PRP-NI-PRNc-GRN Otp Glut_2
Glut
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0957 PRP-NI-PRNc-GRN Otp Glut_3
[-]
692_PRP-NI-PRNc-GRN Otp Glut_3
Glut
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0958 PRP-NI-PRNc-GRN Otp Glut_4
[-]
693_PRP-NI-PRNc-GRN Otp Glut_4
Glut
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0958 PRP-NI-PRNc-GRN Otp Glut_4
[-]
694_PRP-NI-PRNc-GRN Otp Glut_4
Glut
24 MY Glut
[-]
251 NTS Dbh Glut
[-]
1007 NTS Dbh Glut_4
[-]
695_NTS Dbh Glut_4
Glut
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1031 CS-RPO Meis2 Gaba_1
[-]
696_CS-RPO Meis2 Gaba_1
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1032 CS-RPO Meis2 Gaba_2
[-]
697_CS-RPO Meis2 Gaba_2
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1033 CS-RPO Meis2 Gaba_3
[-]
698_CS-RPO Meis2 Gaba_3
Glut-GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1033 CS-RPO Meis2 Gaba_3
[-]
699_CS-RPO Meis2 Gaba_3
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1034 CS-RPO Meis2 Gaba_4
[-]
700_CS-RPO Meis2 Gaba_4
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1034 CS-RPO Meis2 Gaba_4
[-]
701_CS-RPO Meis2 Gaba_4
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1034 CS-RPO Meis2 Gaba_4
[-]
702_CS-RPO Meis2 Gaba_4
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1035 CS-RPO Meis2 Gaba_5
[-]
703_CS-RPO Meis2 Gaba_5
GABA
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1035 CS-RPO Meis2 Gaba_5
[-]
704_CS-RPO Meis2 Gaba_5
GABA
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1036 PRNc Otp Gly-Gaba_1
[-]
705_PRNc Otp Gly-Gaba_1
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1036 PRNc Otp Gly-Gaba_1
[-]
706_PRNc Otp Gly-Gaba_1
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1036 PRNc Otp Gly-Gaba_1
[-]
707_PRNc Otp Gly-Gaba_1
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1036 PRNc Otp Gly-Gaba_1
[-]
708_PRNc Otp Gly-Gaba_1
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1037 PRNc Otp Gly-Gaba_2
[-]
709_PRNc Otp Gly-Gaba_2
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1038 PRNc Otp Gly-Gaba_3
[-]
710_PRNc Otp Gly-Gaba_3
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1039 PRNc Otp Gly-Gaba_4
[-]
711_PRNc Otp Gly-Gaba_4
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1039 PRNc Otp Gly-Gaba_4
[-]
712_PRNc Otp Gly-Gaba_4
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1039 PRNc Otp Gly-Gaba_4
[-]
713_PRNc Otp Gly-Gaba_4
GABA-Glyc
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1040 PRNc Otp Gly-Gaba_5
[-]
714_PRNc Otp Gly-Gaba_5
GABA-Glyc
26 P GABA
[-]
265 PB Sst Gly-Gaba
[-]
1041 PB Sst Gly-Gaba_1
[-]
715_PB Sst Gly-Gaba_1
Glut-GABA
26 P GABA
[-]
266 PRNc Prox1 Brs3 Gly-Gaba
[-]
1043 PRNc Prox1 Brs3 Gly-Gaba_1
[-]
716_PRNc Prox1 Brs3 Gly-Gaba_1
GABA-Glyc
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
717_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
718_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
719_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
720_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
721_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
722_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[-]
723_CS-PRNr-PCG Tmem163 Otp Gaba_1
GABA
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[-]
1045 CS-PRNr-PCG Tmem163 Otp Gaba_2
[-]
724_CS-PRNr-PCG Tmem163 Otp Gaba_2
GABA
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1047 CS-PRNr-DR En1 Sox2 Gaba_1
[-]
725_CS-PRNr-DR En1 Sox2 Gaba_1
GABA
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1047 CS-PRNr-DR En1 Sox2 Gaba_1
[-]
726_CS-PRNr-DR En1 Sox2 Gaba_1
GABA
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1047 CS-PRNr-DR En1 Sox2 Gaba_1
[-]
727_CS-PRNr-DR En1 Sox2 Gaba_1
GABA
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1048 CS-PRNr-DR En1 Sox2 Gaba_2
[-]
728_CS-PRNr-DR En1 Sox2 Gaba_2
GABA
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1048 CS-PRNr-DR En1 Sox2 Gaba_2
[-]
729_CS-PRNr-DR En1 Sox2 Gaba_2
GABA
26 P GABA
[-]
269 LDT Fgf7 Gaba
[-]
1049 LDT Fgf7 Gaba_1
[-]
730_LDT Fgf7 Gaba_1
GABA
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[-]
1050 LDT-DTN Gata3 Nfix Gaba_1
[-]
731_LDT-DTN Gata3 Nfix Gaba_1
GABA
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[-]
1050 LDT-DTN Gata3 Nfix Gaba_1
[-]
732_LDT-DTN Gata3 Nfix Gaba_1
GABA
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[-]
1051 LDT-DTN Gata3 Nfix Gaba_2
[-]
733_LDT-DTN Gata3 Nfix Gaba_2
GABA
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[-]
1051 LDT-DTN Gata3 Nfix Gaba_2
[-]
734_LDT-DTN Gata3 Nfix Gaba_2
GABA
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[-]
1052 NI-RPO Gata3 Nr4a2 Gaba_1
[-]
735_NI-RPO Gata3 Nr4a2 Gaba_1
GABA
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[-]
1052 NI-RPO Gata3 Nr4a2 Gaba_1
[-]
736_NI-RPO Gata3 Nr4a2 Gaba_1
Glut-GABA
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[-]
1053 NI-RPO Gata3 Nr4a2 Gaba_2
[-]
737_NI-RPO Gata3 Nr4a2 Gaba_2
Glut-GABA
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[-]
1053 NI-RPO Gata3 Nr4a2 Gaba_2
[-]
738_NI-RPO Gata3 Nr4a2 Gaba_2
Glut-GABA
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[-]
1055 NI-RPO Gata3 Nr4a2 Gaba_4
[-]
739_NI-RPO Gata3 Nr4a2 Gaba_4
Glut
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[-]
1056 LDT-PCG-CS Gata3 Lhx1 Gaba_1
[-]
740_LDT-PCG-CS Gata3 Lhx1 Gaba_1
GABA
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[-]
1057 LDT-PCG-CS Gata3 Lhx1 Gaba_2
[-]
741_LDT-PCG-CS Gata3 Lhx1 Gaba_2
GABA
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[-]
1057 LDT-PCG-CS Gata3 Lhx1 Gaba_2
[-]
742_LDT-PCG-CS Gata3 Lhx1 Gaba_2
GABA
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[-]
1058 LDT-PCG-CS Gata3 Lhx1 Gaba_3
[-]
743_LDT-PCG-CS Gata3 Lhx1 Gaba_3
Glut-GABA
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[-]
1059 LDT-PCG-CS Gata3 Lhx1 Gaba_4
[-]
744_LDT-PCG-CS Gata3 Lhx1 Gaba_4
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
745_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
746_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
747_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
748_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
749_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1061 PDTg-PCG Pax6 Gaba_1
[-]
750_PDTg-PCG Pax6 Gaba_1
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1062 PDTg-PCG Pax6 Gaba_2
[-]
751_PDTg-PCG Pax6 Gaba_2
Glut-GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1062 PDTg-PCG Pax6 Gaba_2
[-]
752_PDTg-PCG Pax6 Gaba_2
Glut-GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1063 PDTg-PCG Pax6 Gaba_3
[-]
753_PDTg-PCG Pax6 Gaba_3
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1063 PDTg-PCG Pax6 Gaba_3
[-]
754_PDTg-PCG Pax6 Gaba_3
GABA
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[-]
1064 PDTg-PCG Pax6 Gaba_4
[-]
755_PDTg-PCG Pax6 Gaba_4
Glut-GABA
26 P GABA
[-]
274 PDTg Otp Shroom3 Gaba
[-]
1065 PDTg Otp Shroom3 Gaba_1
[-]
756_PDTg Otp Shroom3 Gaba_1
GABA
26 P GABA
[-]
275 PDTg Otp Olig3 Gaba
[-]
1066 PDTg Otp Olig3 Gaba_1
[-]
757_PDTg Otp Olig3 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
758_LDT-PCG St18 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
759_LDT-PCG St18 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
760_LDT-PCG St18 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
761_LDT-PCG St18 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
762_LDT-PCG St18 Gaba_1
GABA-Glyc
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1067 LDT-PCG St18 Gaba_1
[-]
763_LDT-PCG St18 Gaba_1
GABA
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[-]
1068 LDT-PCG St18 Gaba_2
[-]
764_LDT-PCG St18 Gaba_2
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1069 DTN-LDT-IPN Otp Pax3 Gaba_1
[-]
765_DTN-LDT-IPN Otp Pax3 Gaba_1
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1069 DTN-LDT-IPN Otp Pax3 Gaba_1
[-]
766_DTN-LDT-IPN Otp Pax3 Gaba_1
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1070 DTN-LDT-IPN Otp Pax3 Gaba_2
[-]
767_DTN-LDT-IPN Otp Pax3 Gaba_2
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1070 DTN-LDT-IPN Otp Pax3 Gaba_2
[-]
768_DTN-LDT-IPN Otp Pax3 Gaba_2
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1071 DTN-LDT-IPN Otp Pax3 Gaba_3
[-]
769_DTN-LDT-IPN Otp Pax3 Gaba_3
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1071 DTN-LDT-IPN Otp Pax3 Gaba_3
[-]
770_DTN-LDT-IPN Otp Pax3 Gaba_3
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1071 DTN-LDT-IPN Otp Pax3 Gaba_3
[-]
771_DTN-LDT-IPN Otp Pax3 Gaba_3
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1072 DTN-LDT-IPN Otp Pax3 Gaba_4
[-]
772_DTN-LDT-IPN Otp Pax3 Gaba_4
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1072 DTN-LDT-IPN Otp Pax3 Gaba_4
[-]
773_DTN-LDT-IPN Otp Pax3 Gaba_4
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1072 DTN-LDT-IPN Otp Pax3 Gaba_4
[-]
774_DTN-LDT-IPN Otp Pax3 Gaba_4
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1073 DTN-LDT-IPN Otp Pax3 Gaba_5
[-]
775_DTN-LDT-IPN Otp Pax3 Gaba_5
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1073 DTN-LDT-IPN Otp Pax3 Gaba_5
[-]
776_DTN-LDT-IPN Otp Pax3 Gaba_5
GABA
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1073 DTN-LDT-IPN Otp Pax3 Gaba_5
[-]
777_DTN-LDT-IPN Otp Pax3 Gaba_5
GABA
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1159 Astro-NT NN_1
[-]
778_Astro-NT NN_1
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1159 Astro-NT NN_1
[-]
779_Astro-NT NN_1
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1160 Astro-NT NN_2
[-]
780_Astro-NT NN_2
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1160 Astro-NT NN_2
[-]
781_Astro-NT NN_2
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1160 Astro-NT NN_2
[-]
782_Astro-NT NN_2
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1160 Astro-NT NN_2
[-]
783_Astro-NT NN_2
No-NT
30 Astro-Epen
[-]
318 Astro-NT NN
[-]
1160 Astro-NT NN_2
[-]
784_Astro-NT NN_2
No-NT
30 Astro-Epen
[-]
319 Astro-TE NN
[-]
1161 Astro-TE NN_1
[-]
785_Astro-TE NN_1
No-NT
30 Astro-Epen
[-]
319 Astro-TE NN
[-]
1162 Astro-TE NN_2
[-]
786_Astro-TE NN_2
No-NT
30 Astro-Epen
[-]
319 Astro-TE NN
[-]
1163 Astro-TE NN_3
[-]
787_Astro-TE NN_3
No-NT
30 Astro-Epen
[-]
319 Astro-TE NN
[-]
1163 Astro-TE NN_3
[-]
788_Astro-TE NN_3
Glut
30 Astro-Epen
[-]
319 Astro-TE NN
[-]
1165 Astro-TE NN_5
[-]
789_Astro-TE NN_5
No-NT
30 Astro-Epen
[-]
321 Astroependymal NN
[-]
1171 Astroependymal NN_3
[-]
790_Astroependymal NN_3
No-NT
30 Astro-Epen
[-]
321 Astroependymal NN
[-]
1171 Astroependymal NN_3
[-]
791_Astroependymal NN_3
No-NT
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
792_Tanycyte NN_2
No-NT
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
793_Tanycyte NN_2
No-NT
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
794_Tanycyte NN_2
Glut
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
795_Tanycyte NN_2
No-NT
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
796_Tanycyte NN_2
No-NT
30 Astro-Epen
[-]
322 Tanycyte NN
[-]
1173 Tanycyte NN_2
[-]
797_Tanycyte NN_2
No-NT
30 Astro-Epen
[-]
323 Ependymal NN
[-]
1175 Ependymal NN_1
[-]
798_Ependymal NN_1
No-NT
30 Astro-Epen
[-]
323 Ependymal NN
[-]
1175 Ependymal NN_1
[-]
799_Ependymal NN_1
No-NT
30 Astro-Epen
[-]
323 Ependymal NN
[-]
1175 Ependymal NN_1
[-]
800_Ependymal NN_1
No-NT
30 Astro-Epen
[-]
324 Hypendymal NN
[-]
1177 Hypendymal NN_1
[-]
801_Hypendymal NN_1
No-NT
31 OPC-Oligo
[-]
326 OPC NN
[-]
1179 OPC NN_1
[-]
802_OPC NN_1
No-NT
31 OPC-Oligo
[-]
326 OPC NN
[-]
1179 OPC NN_1
[-]
803_OPC NN_1
No-NT
31 OPC-Oligo
[-]
326 OPC NN
[-]
1179 OPC NN_1
[-]
804_OPC NN_1
No-NT
31 OPC-Oligo
[-]
326 OPC NN
[-]
1179 OPC NN_1
[-]
805_OPC NN_1
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1181 COP NN_1
[-]
806_COP NN_1
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1181 COP NN_1
[-]
807_COP NN_1
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1182 NFOL NN_2
[-]
808_NFOL NN_2
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1182 NFOL NN_2
[-]
809_NFOL NN_2
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1182 NFOL NN_2
[-]
810_NFOL NN_2
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1183 MFOL NN_3
[-]
811_MFOL NN_3
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1183 MFOL NN_3
[-]
812_MFOL NN_3
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1183 MFOL NN_3
[-]
813_MFOL NN_3
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
814_MOL NN_4
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
815_MOL NN_4
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
816_MOL NN_4
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
817_MOL NN_4
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
818_MOL NN_4
No-NT
31 OPC-Oligo
[-]
327 Oligo NN
[-]
1184 MOL NN_4
[-]
819_MOL NN_4
No-NT
33 Vascular
[-]
329 ABC NN
[-]
1186 ABC NN_1
[-]
820_ABC NN_1
No-NT
33 Vascular
[-]
330 VLMC NN
[-]
1187 VLMC NN_1
[-]
821_VLMC NN_1
No-NT
33 Vascular
[-]
330 VLMC NN
[-]
1187 VLMC NN_1
[-]
822_VLMC NN_1
No-NT
33 Vascular
[-]
330 VLMC NN
[-]
1188 VLMC NN_2
[-]
823_VLMC NN_2
No-NT
33 Vascular
[-]
330 VLMC NN
[-]
1188 VLMC NN_2
[-]
824_VLMC NN_2
No-NT
33 Vascular
[-]
331 Peri NN
[-]
1191 Peri NN_1
[-]
825_Peri NN_1
No-NT
33 Vascular
[-]
331 Peri NN
[-]
1191 Peri NN_1
[-]
826_Peri NN_1
No-NT
33 Vascular
[-]
331 Peri NN
[-]
1191 Peri NN_1
[-]
827_Peri NN_1
No-NT
33 Vascular
[-]
331 Peri NN
[-]
1191 Peri NN_1
[-]
828_Peri NN_1
No-NT
33 Vascular
[-]
332 SMC NN
[-]
1192 SMC NN_1
[-]
829_SMC NN_1
No-NT
33 Vascular
[-]
332 SMC NN
[-]
1192 SMC NN_1
[-]
830_SMC NN_1
No-NT
33 Vascular
[-]
332 SMC NN
[-]
1192 SMC NN_1
[-]
831_SMC NN_1
No-NT
33 Vascular
[-]
332 SMC NN
[-]
1192 SMC NN_1
[-]
832_SMC NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
833_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
834_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
835_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
836_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
837_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
838_Endo NN_1
No-NT
33 Vascular
[-]
333 Endo NN
[-]
1193 Endo NN_1
[-]
839_Endo NN_1
Glut
34 Immune
[-]
334 Microglia NN
[-]
1194 Microglia NN_1
[-]
840_Microglia NN_1
No-NT
34 Immune
[-]
334 Microglia NN
[-]
1194 Microglia NN_1
[-]
841_Microglia NN_1
No-NT
34 Immune
[-]
334 Microglia NN
[-]
1194 Microglia NN_1
[-]
842_Microglia NN_1
No-NT
34 Immune
[-]
334 Microglia NN
[-]
1194 Microglia NN_1
[-]
843_Microglia NN_1
No-NT
34 Immune
[-]
334 Microglia NN
[-]
1194 Microglia NN_1
[-]
844_Microglia NN_1
No-NT
34 Immune
[-]
335 BAM NN
[-]
1195 BAM NN_1
[-]
845_BAM NN_1
No-NT
34 Immune
[-]
337 DC NN
[-]
1197 DC NN_1
[-]
846_DC NN_1
No-NT
34 Immune
[-]
338 Lymphoid NN
[-]
1201 T cells NN_4
[-]
847_T cells NN_4
No-NT
+ + . + \ No newline at end of file diff --git a/_static/Zeng-Aging-Mouse-taxonomy/20241130/neurotransmitter.html b/_static/Zeng-Aging-Mouse-taxonomy/20241130/neurotransmitter.html new file mode 100644 index 0000000..8f6e89d --- /dev/null +++ b/_static/Zeng-Aging-Mouse-taxonomy/20241130/neurotransmitter.html @@ -0,0 +1,44 @@ + + + Zeng-Aging-Mouse-taxonmy: neurotransmitter types + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
neurotransmitter
Glut
No-NT
GABA
Glut-GABA
Chol
Dopa
Hist
GABA-Glyc
Sero
+ + . + \ No newline at end of file diff --git a/_static/Zeng-Aging-Mouse-taxonomy/20241130/subclass.html b/_static/Zeng-Aging-Mouse-taxonomy/20241130/subclass.html new file mode 100644 index 0000000..64df6ac --- /dev/null +++ b/_static/Zeng-Aging-Mouse-taxonomy/20241130/subclass.html @@ -0,0 +1,706 @@ + + + Zeng-Aging-Mouse-taxonmy: cell type subclasses + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
classsubclass
01 IT-ET Glut
[-]
001 CLA-EPd-CTX Car3 Glut
[+]
01 IT-ET Glut
[-]
002 IT EP-CLA Glut
[+]
01 IT-ET Glut
[-]
003 L5/6 IT TPE-ENT Glut
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[+]
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[+]
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[+]
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[+]
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[+]
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[+]
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[+]
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[+]
01 IT-ET Glut
[-]
020 L2/3 IT RSP Glut
[+]
01 IT-ET Glut
[-]
021 L4 RSP-ACA Glut
[+]
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[+]
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[+]
01 IT-ET Glut
[-]
024 L5 PPP Glut
[+]
01 IT-ET Glut
[-]
025 CA2-FC-IG Glut
[+]
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[+]
02 NP-CT-L6b Glut
[-]
029 L6b CTX Glut
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[+]
02 NP-CT-L6b Glut
[-]
031 CT SUB Glut
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[+]
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[+]
02 NP-CT-L6b Glut
[-]
034 NP PPP Glut
[+]
03 OB-CR Glut
[-]
036 HPF CR Glut
[+]
04 DG-IMN Glut
[-]
037 DG Glut
[+]
04 DG-IMN Glut
[-]
038 DG-PIR Ex IMN
[+]
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[+]
06 CTX-CGE GABA
[-]
048 RHP-COA Ndnf Gaba
[+]
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[+]
07 CTX-MGE GABA
[-]
050 Lamp5 Lhx6 Gaba
[+]
07 CTX-MGE GABA
[-]
051 Pvalb chandelier Gaba
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[+]
08 CNU-MGE GABA
[-]
054 STR Prox1 Lhx6 Gaba
[+]
08 CNU-MGE GABA
[-]
055 STR Lhx8 Gaba
[+]
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[+]
08 CNU-MGE GABA
[-]
058 PAL-STR Gaba-Chol
[+]
09 CNU-LGE GABA
[-]
059 GPe-SI Sox6 Cyp26b1 Gaba
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[+]
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[+]
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[+]
11 CNU-HYa GABA
[-]
066 NDB-SI-ant Prdm12 Gaba
[+]
11 CNU-HYa GABA
[-]
076 MEA-BST Lhx6 Nfib Gaba
[+]
11 CNU-HYa GABA
[-]
085 SI-MPO-LPO Lhx8 Gaba
[+]
11 CNU-HYa GABA
[-]
086 MPO-ADP Lhx8 Gaba
[+]
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[+]
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[+]
12 HY GABA
[-]
091 ARH-PVi Six6 Dopa-Gaba
[+]
12 HY GABA
[-]
092 TMv-PMv Tbx3 Hist-Gaba
[+]
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[+]
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[+]
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[+]
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[+]
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[+]
12 HY GABA
[-]
100 AHN Onecut3 Gaba
[+]
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[+]
12 HY GABA
[-]
103 PVHd-DMH Lhx6 Gaba
[+]
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[+]
12 HY GABA
[-]
105 TMd-DMH Foxd2 Gaba
[+]
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[+]
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[+]
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[+]
13 CNU-HYa Glut
[-]
111 TRS-BAC Sln Glut
[+]
13 CNU-HYa Glut
[-]
114 COAa-PAA-MEA Barhl2 Glut
[+]
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[+]
13 CNU-HYa Glut
[-]
118 ADP-MPO Trp73 Glut
[+]
14 HY Glut
[-]
123 DMH Nkx2-4 Glut
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[+]
14 HY Glut
[-]
125 DMH Hmx2 Glut
[+]
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[+]
14 HY Glut
[-]
127 DMH-LHA Vgll2 Glut
[+]
14 HY Glut
[-]
128 VMH Fezf1 Glut
[+]
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[+]
14 HY Glut
[-]
131 LHA-AHN-PVH Otp Trh Glut
[+]
14 HY Glut
[-]
132 AHN-RCH-LHA Otp Fezf1 Glut
[+]
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[+]
14 HY Glut
[-]
134 PH-ant-LHA Otp Bsx Glut
[+]
14 HY Glut
[-]
135 STN-PSTN Pitx2 Glut
[+]
14 HY Glut
[-]
136 PMv-TMv Pitx2 Glut
[+]
14 HY Glut
[-]
137 PH-an Pitx2 Glut
[+]
14 HY Glut
[-]
138 PH Pitx2 Glut
[+]
14 HY Glut
[-]
140 PMd-LHA Foxb1 Glut
[+]
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[+]
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[+]
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[+]
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[+]
19 MB Glut
[-]
156 MB-ant-ve Dmrta2 Glut
[+]
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[+]
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[+]
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[+]
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[+]
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[+]
19 MB Glut
[-]
166 MRN Pou3f1 C1ql4 Glut
[+]
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[+]
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[+]
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[+]
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[+]
19 MB Glut
[-]
176 SCig Foxb1 Glut
[+]
19 MB Glut
[-]
179 SCdg-PAG Tfap2b Glut
[+]
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[+]
19 MB Glut
[-]
190 ND-INC Foxd2 Glut
[+]
20 MB GABA
[-]
191 PAG-MRN Rln3 Gaba
[+]
20 MB GABA
[-]
192 PPN-CUN-PCG Otp En1 Gaba
[+]
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[+]
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[+]
20 MB GABA
[-]
195 SNr-VTA Pax5 Npas1 Gaba
[+]
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[+]
20 MB GABA
[-]
197 SNr Six3 Gaba
[+]
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[+]
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[+]
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[+]
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[+]
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[+]
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[+]
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[+]
23 P Glut
[-]
220 PB Pax5 Glut
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[+]
23 P Glut
[-]
223 B-PB Nr4a2 Glut
[+]
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[+]
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[+]
23 P Glut
[-]
226 PRNc-PARN Tlx1 Glut
[+]
23 P Glut
[-]
230 PRNr Otp Nfib Glut
[+]
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[+]
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[+]
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[+]
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[+]
24 MY Glut
[-]
251 NTS Dbh Glut
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[+]
26 P GABA
[-]
265 PB Sst Gly-Gaba
[+]
26 P GABA
[-]
266 PRNc Prox1 Brs3 Gly-Gaba
[+]
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
[+]
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[+]
26 P GABA
[-]
269 LDT Fgf7 Gaba
[+]
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[+]
26 P GABA
[-]
271 NI-RPO Gata3 Nr4a2 Gaba
[+]
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
[+]
26 P GABA
[-]
273 PDTg-PCG Pax6 Gaba
[+]
26 P GABA
[-]
274 PDTg Otp Shroom3 Gaba
[+]
26 P GABA
[-]
275 PDTg Otp Olig3 Gaba
[+]
26 P GABA
[-]
276 LDT-PCG St18 Gaba
[+]
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[+]
30 Astro-Epen
[-]
318 Astro-NT NN
[+]
30 Astro-Epen
[-]
319 Astro-TE NN
[+]
30 Astro-Epen
[-]
321 Astroependymal NN
[+]
30 Astro-Epen
[-]
322 Tanycyte NN
[+]
30 Astro-Epen
[-]
323 Ependymal NN
[+]
30 Astro-Epen
[-]
324 Hypendymal NN
[+]
31 OPC-Oligo
[-]
326 OPC NN
[+]
31 OPC-Oligo
[-]
327 Oligo NN
[+]
33 Vascular
[-]
329 ABC NN
[+]
33 Vascular
[-]
330 VLMC NN
[+]
33 Vascular
[-]
331 Peri NN
[+]
33 Vascular
[-]
332 SMC NN
[+]
33 Vascular
[-]
333 Endo NN
[+]
34 Immune
[-]
334 Microglia NN
[+]
34 Immune
[-]
335 BAM NN
[+]
34 Immune
[-]
337 DC NN
[+]
34 Immune
[-]
338 Lymphoid NN
[+]
+ + . + \ No newline at end of file diff --git a/_static/Zeng-Aging-Mouse-taxonomy/20241130/supertype.html b/_static/Zeng-Aging-Mouse-taxonomy/20241130/supertype.html new file mode 100644 index 0000000..71f0eec --- /dev/null +++ b/_static/Zeng-Aging-Mouse-taxonomy/20241130/supertype.html @@ -0,0 +1,2179 @@ + + + Zeng-Aging-Mouse-taxonmy: cell type supertypes + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
classsubclasssupertype
01 IT-ET Glut
[-]
001 CLA-EPd-CTX Car3 Glut
[-]
0001 CLA-EPd-CTX Car3 Glut_1
[+]
01 IT-ET Glut
[-]
002 IT EP-CLA Glut
[-]
0003 IT EP-CLA Glut_1
[+]
01 IT-ET Glut
[-]
002 IT EP-CLA Glut
[-]
0004 IT EP-CLA Glut_2
[+]
01 IT-ET Glut
[-]
003 L5/6 IT TPE-ENT Glut
[-]
0007 L5/6 IT TPE-ENT Glut_1
[+]
01 IT-ET Glut
[-]
003 L5/6 IT TPE-ENT Glut
[-]
0009 L5/6 IT TPE-ENT Glut_3
[+]
01 IT-ET Glut
[-]
003 L5/6 IT TPE-ENT Glut
[-]
0010 L5/6 IT TPE-ENT Glut_4
[+]
01 IT-ET Glut
[-]
003 L5/6 IT TPE-ENT Glut
[-]
0011 L5/6 IT TPE-ENT Glut_5
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0013 L6 IT CTX Glut_1
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0014 L6 IT CTX Glut_2
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0015 L6 IT CTX Glut_3
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0016 L6 IT CTX Glut_4
[+]
01 IT-ET Glut
[-]
004 L6 IT CTX Glut
[-]
0017 L6 IT CTX Glut_5
[+]
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0018 L5 IT CTX Glut_1
[+]
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0019 L5 IT CTX Glut_2
[+]
01 IT-ET Glut
[-]
005 L5 IT CTX Glut
[-]
0022 L5 IT CTX Glut_5
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0023 L4/5 IT CTX Glut_1
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0024 L4/5 IT CTX Glut_2
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0025 L4/5 IT CTX Glut_3
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0026 L4/5 IT CTX Glut_4
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0027 L4/5 IT CTX Glut_5
[+]
01 IT-ET Glut
[-]
006 L4/5 IT CTX Glut
[-]
0028 L4/5 IT CTX Glut_6
[+]
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0029 L2/3 IT CTX Glut_1
[+]
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0030 L2/3 IT CTX Glut_2
[+]
01 IT-ET Glut
[-]
007 L2/3 IT CTX Glut
[-]
0031 L2/3 IT CTX Glut_3
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0033 L2/3 IT ENT Glut_1
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0035 L2/3 IT ENT Glut_3
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0036 L2/3 IT ENT Glut_4
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0037 L2/3 IT ENT Glut_5
[+]
01 IT-ET Glut
[-]
008 L2/3 IT ENT Glut
[-]
0038 L2/3 IT ENT Glut_6
[+]
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0039 L2/3 IT PIR-ENTl Glut_1
[+]
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0042 L2/3 IT PIR-ENTl Glut_4
[+]
01 IT-ET Glut
[-]
009 L2/3 IT PIR-ENTl Glut
[-]
0043 L2/3 IT PIR-ENTl Glut_5
[+]
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0051 L2 IT ENT-po Glut_1
[+]
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0052 L2 IT ENT-po Glut_2
[+]
01 IT-ET Glut
[-]
011 L2 IT ENT-po Glut
[-]
0054 L2 IT ENT-po Glut_4
[+]
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0066 ENTmv-PA-COAp Glut_1
[+]
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0067 ENTmv-PA-COAp Glut_2
[+]
01 IT-ET Glut
[-]
015 ENTmv-PA-COAp Glut
[-]
0068 ENTmv-PA-COAp Glut_3
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0069 CA1-ProS Glut_1
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0070 CA1-ProS Glut_2
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0071 CA1-ProS Glut_3
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0072 CA1-ProS Glut_4
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0073 CA1-ProS Glut_5
[+]
01 IT-ET Glut
[-]
016 CA1-ProS Glut
[-]
0074 CA1-ProS Glut_6
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0075 CA3 Glut_1
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0076 CA3 Glut_2
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0077 CA3 Glut_3
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0078 CA3 Glut_4
[+]
01 IT-ET Glut
[-]
017 CA3 Glut
[-]
0079 CA3 Glut_5
[+]
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0080 L2 IT PPP-APr Glut_1
[+]
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0081 L2 IT PPP-APr Glut_2
[+]
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0082 L2 IT PPP-APr Glut_3
[+]
01 IT-ET Glut
[-]
018 L2 IT PPP-APr Glut
[-]
0083 L2 IT PPP-APr Glut_4
[+]
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0084 L2/3 IT PPP Glut_1
[+]
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0085 L2/3 IT PPP Glut_2
[+]
01 IT-ET Glut
[-]
019 L2/3 IT PPP Glut
[-]
0086 L2/3 IT PPP Glut_3
[+]
01 IT-ET Glut
[-]
020 L2/3 IT RSP Glut
[-]
0087 L2/3 IT RSP Glut_1
[+]
01 IT-ET Glut
[-]
020 L2/3 IT RSP Glut
[-]
0088 L2/3 IT RSP Glut_2
[+]
01 IT-ET Glut
[-]
021 L4 RSP-ACA Glut
[-]
0089 L4 RSP-ACA Glut_1
[+]
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0090 L5 ET CTX Glut_1
[+]
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0091 L5 ET CTX Glut_2
[+]
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0094 L5 ET CTX Glut_5
[+]
01 IT-ET Glut
[-]
022 L5 ET CTX Glut
[-]
0095 L5 ET CTX Glut_6
[+]
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0096 SUB-ProS Glut_1
[+]
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0097 SUB-ProS Glut_2
[+]
01 IT-ET Glut
[-]
023 SUB-ProS Glut
[-]
0098 SUB-ProS Glut_3
[+]
01 IT-ET Glut
[-]
024 L5 PPP Glut
[-]
0099 L5 PPP Glut_1
[+]
01 IT-ET Glut
[-]
025 CA2-FC-IG Glut
[-]
0101 CA2-FC-IG Glut_2
[+]
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0106 L6b/CT ENT Glut_1
[+]
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0107 L6b/CT ENT Glut_2
[+]
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0108 L6b/CT ENT Glut_3
[+]
02 NP-CT-L6b Glut
[-]
028 L6b/CT ENT Glut
[-]
0109 L6b/CT ENT Glut_4
[+]
02 NP-CT-L6b Glut
[-]
029 L6b CTX Glut
[-]
0112 L6b CTX Glut_3
[+]
02 NP-CT-L6b Glut
[-]
029 L6b CTX Glut
[-]
0113 L6b CTX Glut_4
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0114 L6 CT CTX Glut_1
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0115 L6 CT CTX Glut_2
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0116 L6 CT CTX Glut_3
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0117 L6 CT CTX Glut_4
[+]
02 NP-CT-L6b Glut
[-]
030 L6 CT CTX Glut
[-]
0118 L6 CT CTX Glut_5
[+]
02 NP-CT-L6b Glut
[-]
031 CT SUB Glut
[-]
0120 CT SUB Glut_1
[+]
02 NP-CT-L6b Glut
[-]
031 CT SUB Glut
[-]
0121 CT SUB Glut_2
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0122 L5 NP CTX Glut_1
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0123 L5 NP CTX Glut_2
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0124 L5 NP CTX Glut_3
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0125 L5 NP CTX Glut_4
[+]
02 NP-CT-L6b Glut
[-]
032 L5 NP CTX Glut
[-]
0126 L5 NP CTX Glut_5
[+]
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0127 NP SUB Glut_1
[+]
02 NP-CT-L6b Glut
[-]
033 NP SUB Glut
[-]
0128 NP SUB Glut_2
[+]
02 NP-CT-L6b Glut
[-]
034 NP PPP Glut
[-]
0129 NP PPP Glut_1
[+]
03 OB-CR Glut
[-]
036 HPF CR Glut
[-]
0135 HPF CR Glut_1
[+]
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0137 DG Glut_2
[+]
04 DG-IMN Glut
[-]
037 DG Glut
[-]
0139 DG Glut_4
[+]
04 DG-IMN Glut
[-]
038 DG-PIR Ex IMN
[-]
0141 DG-PIR Ex IMN_2
[+]
05 OB-IMN GABA
[-]
045 OB-STR-CTX Inh IMN
[-]
0166 OB-STR-CTX Inh IMN_1
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0173 Vip Gaba_1
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0174 Vip Gaba_2
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0175 Vip Gaba_3
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0176 Vip Gaba_4
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0177 Vip Gaba_5
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0178 Vip Gaba_6
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0179 Vip Gaba_7
[+]
06 CTX-CGE GABA
[-]
046 Vip Gaba
[-]
0181 Vip Gaba_9
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0185 Sncg Gaba_1
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0187 Sncg Gaba_3
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0188 Sncg Gaba_4
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0190 Sncg Gaba_6
[+]
06 CTX-CGE GABA
[-]
047 Sncg Gaba
[-]
0192 Sncg Gaba_8
[+]
06 CTX-CGE GABA
[-]
048 RHP-COA Ndnf Gaba
[-]
0193 RHP-COA Ndnf Gaba_1
[+]
06 CTX-CGE GABA
[-]
048 RHP-COA Ndnf Gaba
[-]
0198 RHP-COA Ndnf Gaba_6
[+]
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0199 Lamp5 Gaba_1
[+]
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0200 Lamp5 Gaba_2
[+]
06 CTX-CGE GABA
[-]
049 Lamp5 Gaba
[-]
0201 Lamp5 Gaba_3
[+]
07 CTX-MGE GABA
[-]
050 Lamp5 Lhx6 Gaba
[-]
0203 Lamp5 Lhx6 Gaba_1
[+]
07 CTX-MGE GABA
[-]
051 Pvalb chandelier Gaba
[-]
0204 Pvalb chandelier Gaba_1
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0205 Pvalb Gaba_1
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0207 Pvalb Gaba_3
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0208 Pvalb Gaba_4
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0209 Pvalb Gaba_5
[+]
07 CTX-MGE GABA
[-]
052 Pvalb Gaba
[-]
0212 Pvalb Gaba_8
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0214 Sst Gaba_1
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0215 Sst Gaba_2
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0216 Sst Gaba_3
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0217 Sst Gaba_4
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0218 Sst Gaba_5
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0220 Sst Gaba_7
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0221 Sst Gaba_8
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0223 Sst Gaba_10
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0224 Sst Gaba_11
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0225 Sst Gaba_12
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0226 Sst Gaba_13
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0227 Sst Gaba_14
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0228 Sst Gaba_15
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0229 Sst Gaba_16
[+]
07 CTX-MGE GABA
[-]
053 Sst Gaba
[-]
0232 Sst Gaba_19
[+]
08 CNU-MGE GABA
[-]
054 STR Prox1 Lhx6 Gaba
[-]
0234 STR Prox1 Lhx6 Gaba_2
[+]
08 CNU-MGE GABA
[-]
055 STR Lhx8 Gaba
[-]
0237 STR Lhx8 Gaba_2
[+]
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[-]
0239 Sst Chodl Gaba_2
[+]
08 CNU-MGE GABA
[-]
056 Sst Chodl Gaba
[-]
0241 Sst Chodl Gaba_4
[+]
08 CNU-MGE GABA
[-]
058 PAL-STR Gaba-Chol
[-]
0260 PAL-STR Gaba-Chol_2
[+]
09 CNU-LGE GABA
[-]
059 GPe-SI Sox6 Cyp26b1 Gaba
[-]
0258 GPe-SI Sox6 Cyp26b1 Gaba_2
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0265 STR D1 Gaba_1
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0266 STR D1 Gaba_2
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0270 STR D1 Gaba_6
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0272 STR D1 Gaba_8
[+]
09 CNU-LGE GABA
[-]
061 STR D1 Gaba
[-]
0273 STR D1 Gaba_9
[+]
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0275 STR D2 Gaba_2
[+]
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0276 STR D2 Gaba_3
[+]
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0278 STR D2 Gaba_5
[+]
09 CNU-LGE GABA
[-]
062 STR D2 Gaba
[-]
0279 STR D2 Gaba_6
[+]
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[-]
0282 STR D1 Sema5a Gaba_2
[+]
09 CNU-LGE GABA
[-]
063 STR D1 Sema5a Gaba
[-]
0284 STR D1 Sema5a Gaba_4
[+]
11 CNU-HYa GABA
[-]
066 NDB-SI-ant Prdm12 Gaba
[-]
0295 NDB-SI-ant Prdm12 Gaba_1
[+]
11 CNU-HYa GABA
[-]
076 MEA-BST Lhx6 Nfib Gaba
[-]
0361 MEA-BST Lhx6 Nfib Gaba_5
[+]
11 CNU-HYa GABA
[-]
085 SI-MPO-LPO Lhx8 Gaba
[-]
0398 SI-MPO-LPO Lhx8 Gaba_3
[+]
11 CNU-HYa GABA
[-]
086 MPO-ADP Lhx8 Gaba
[-]
0403 MPO-ADP Lhx8 Gaba_2
[+]
11 CNU-HYa GABA
[-]
086 MPO-ADP Lhx8 Gaba
[-]
0406 MPO-ADP Lhx8 Gaba_5
[+]
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0412 PVR Six3 Sox3 Gaba_2
[+]
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0418 PVR Six3 Sox3 Gaba_8
[+]
11 CNU-HYa GABA
[-]
089 PVR Six3 Sox3 Gaba
[-]
0419 PVR Six3 Sox3 Gaba_9
[+]
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0420 BST-MPN Six3 Nrgn Gaba_1
[+]
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0422 BST-MPN Six3 Nrgn Gaba_3
[+]
11 CNU-HYa GABA
[-]
090 BST-MPN Six3 Nrgn Gaba
[-]
0426 BST-MPN Six3 Nrgn Gaba_7
[+]
12 HY GABA
[-]
091 ARH-PVi Six6 Dopa-Gaba
[-]
0427 ARH-PVi Six6 Dopa-Gaba_1
[+]
12 HY GABA
[-]
092 TMv-PMv Tbx3 Hist-Gaba
[-]
0429 TMv-PMv Tbx3 Hist-Gaba_1
[+]
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0436 SCH Six6 Cdc14a Gaba_1
[+]
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0437 SCH Six6 Cdc14a Gaba_2
[+]
12 HY GABA
[-]
094 SCH Six6 Cdc14a Gaba
[-]
0438 SCH Six6 Cdc14a Gaba_3
[+]
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[-]
0439 DMH Prdm13 Gaba_1
[+]
12 HY GABA
[-]
095 DMH Prdm13 Gaba
[-]
0440 DMH Prdm13 Gaba_2
[+]
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0442 PVHd-SBPV Six3 Prox1 Gaba_1
[+]
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0443 PVHd-SBPV Six3 Prox1 Gaba_2
[+]
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0444 PVHd-SBPV Six3 Prox1 Gaba_3
[+]
12 HY GABA
[-]
097 PVHd-SBPV Six3 Prox1 Gaba
[-]
0445 PVHd-SBPV Six3 Prox1 Gaba_4
[+]
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0447 AHN-SBPV-PVHd Pdrm12 Gaba_2
[+]
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0448 AHN-SBPV-PVHd Pdrm12 Gaba_3
[+]
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0449 AHN-SBPV-PVHd Pdrm12 Gaba_4
[+]
12 HY GABA
[-]
098 AHN-SBPV-PVHd Pdrm12 Gaba
[-]
0450 AHN-SBPV-PVHd Pdrm12 Gaba_5
[+]
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0453 SBPV-PVa Six6 Satb2 Gaba_1
[+]
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0454 SBPV-PVa Six6 Satb2 Gaba_2
[+]
12 HY GABA
[-]
099 SBPV-PVa Six6 Satb2 Gaba
[-]
0455 SBPV-PVa Six6 Satb2 Gaba_3
[+]
12 HY GABA
[-]
100 AHN Onecut3 Gaba
[-]
0456 AHN Onecut3 Gaba_1
[+]
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0470 DMH-LHA Gsx1 Gaba_1
[+]
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0472 DMH-LHA Gsx1 Gaba_3
[+]
12 HY GABA
[-]
102 DMH-LHA Gsx1 Gaba
[-]
0473 DMH-LHA Gsx1 Gaba_4
[+]
12 HY GABA
[-]
103 PVHd-DMH Lhx6 Gaba
[-]
0475 PVHd-DMH Lhx6 Gaba_2
[+]
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0478 TU-ARH Otp Six6 Gaba_1
[+]
12 HY GABA
[-]
104 TU-ARH Otp Six6 Gaba
[-]
0479 TU-ARH Otp Six6 Gaba_2
[+]
12 HY GABA
[-]
105 TMd-DMH Foxd2 Gaba
[-]
0481 TMd-DMH Foxd2 Gaba_1
[+]
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0482 PVpo-VMPO-MPN Hmx2 Gaba_1
[+]
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0483 PVpo-VMPO-MPN Hmx2 Gaba_2
[+]
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0484 PVpo-VMPO-MPN Hmx2 Gaba_3
[+]
12 HY GABA
[-]
106 PVpo-VMPO-MPN Hmx2 Gaba
[-]
0486 PVpo-VMPO-MPN Hmx2 Gaba_5
[+]
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0487 DMH Hmx2 Gaba_1
[+]
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0489 DMH Hmx2 Gaba_3
[+]
12 HY GABA
[-]
107 DMH Hmx2 Gaba
[-]
0492 DMH Hmx2 Gaba_6
[+]
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0493 ARH-PVp Tbx3 Gaba_1
[+]
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0494 ARH-PVp Tbx3 Gaba_2
[+]
12 HY GABA
[-]
108 ARH-PVp Tbx3 Gaba
[-]
0495 ARH-PVp Tbx3 Gaba_3
[+]
13 CNU-HYa Glut
[-]
111 TRS-BAC Sln Glut
[-]
0502 TRS-BAC Sln Glut_1
[+]
13 CNU-HYa Glut
[-]
114 COAa-PAA-MEA Barhl2 Glut
[-]
0515 COAa-PAA-MEA Barhl2 Glut_7
[+]
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0520 AVPV-MEPO-SFO Tbr1 Glut_2
[+]
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0521 AVPV-MEPO-SFO Tbr1 Glut_3
[+]
13 CNU-HYa Glut
[-]
116 AVPV-MEPO-SFO Tbr1 Glut
[-]
0522 AVPV-MEPO-SFO Tbr1 Glut_4
[+]
13 CNU-HYa Glut
[-]
118 ADP-MPO Trp73 Glut
[-]
0527 ADP-MPO Trp73 Glut_1
[+]
14 HY Glut
[-]
123 DMH Nkx2-4 Glut
[-]
0544 DMH Nkx2-4 Glut_1
[+]
14 HY Glut
[-]
123 DMH Nkx2-4 Glut
[-]
0545 DMH Nkx2-4 Glut_2
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0546 MPN-MPO-PVpo Hmx2 Glut_1
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0547 MPN-MPO-PVpo Hmx2 Glut_2
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0548 MPN-MPO-PVpo Hmx2 Glut_3
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0549 MPN-MPO-PVpo Hmx2 Glut_4
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0550 MPN-MPO-PVpo Hmx2 Glut_5
[+]
14 HY Glut
[-]
124 MPN-MPO-PVpo Hmx2 Glut
[-]
0551 MPN-MPO-PVpo Hmx2 Glut_6
[+]
14 HY Glut
[-]
125 DMH Hmx2 Glut
[-]
0552 DMH Hmx2 Glut_1
[+]
14 HY Glut
[-]
125 DMH Hmx2 Glut
[-]
0553 DMH Hmx2 Glut_2
[+]
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0554 ARH-PVp Tbx3 Glut_1
[+]
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0555 ARH-PVp Tbx3 Glut_2
[+]
14 HY Glut
[-]
126 ARH-PVp Tbx3 Glut
[-]
0556 ARH-PVp Tbx3 Glut_3
[+]
14 HY Glut
[-]
127 DMH-LHA Vgll2 Glut
[-]
0562 DMH-LHA Vgll2 Glut_4
[+]
14 HY Glut
[-]
128 VMH Fezf1 Glut
[-]
0564 VMH Fezf1 Glut_2
[+]
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0566 VMH Nr5a1 Glut_1
[+]
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0567 VMH Nr5a1 Glut_2
[+]
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0568 VMH Nr5a1 Glut_3
[+]
14 HY Glut
[-]
129 VMH Nr5a1 Glut
[-]
0570 VMH Nr5a1 Glut_5
[+]
14 HY Glut
[-]
131 LHA-AHN-PVH Otp Trh Glut
[-]
0575 LHA-AHN-PVH Otp Trh Glut_2
[+]
14 HY Glut
[-]
131 LHA-AHN-PVH Otp Trh Glut
[-]
0577 LHA-AHN-PVH Otp Trh Glut_4
[+]
14 HY Glut
[-]
132 AHN-RCH-LHA Otp Fezf1 Glut
[-]
0580 AHN-RCH-LHA Otp Fezf1 Glut_2
[+]
14 HY Glut
[-]
132 AHN-RCH-LHA Otp Fezf1 Glut
[-]
0581 AHN-RCH-LHA Otp Fezf1 Glut_3
[+]
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0587 PVH-SO-PVa Otp Glut_3
[+]
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0588 PVH-SO-PVa Otp Glut_4
[+]
14 HY Glut
[-]
133 PVH-SO-PVa Otp Glut
[-]
0589 PVH-SO-PVa Otp Glut_5
[+]
14 HY Glut
[-]
134 PH-ant-LHA Otp Bsx Glut
[-]
0595 PH-ant-LHA Otp Bsx Glut_5
[+]
14 HY Glut
[-]
135 STN-PSTN Pitx2 Glut
[-]
0599 STN-PSTN Pitx2 Glut_2
[+]
14 HY Glut
[-]
136 PMv-TMv Pitx2 Glut
[-]
0607 PMv-TMv Pitx2 Glut_3
[+]
14 HY Glut
[-]
137 PH-an Pitx2 Glut
[-]
0608 PH-an Pitx2 Glut_1
[+]
14 HY Glut
[-]
138 PH Pitx2 Glut
[-]
0610 PH Pitx2 Glut_1
[+]
14 HY Glut
[-]
138 PH Pitx2 Glut
[-]
0611 PH Pitx2 Glut_2
[+]
14 HY Glut
[-]
140 PMd-LHA Foxb1 Glut
[-]
0620 PMd-LHA Foxb1 Glut_2
[+]
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0623 PH-SUM Foxa1 Glut_2
[+]
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0626 PH-SUM Foxa1 Glut_5
[+]
14 HY Glut
[-]
141 PH-SUM Foxa1 Glut
[-]
0627 PH-SUM Foxa1 Glut_6
[+]
16 HY MM Glut
[-]
143 MM-ant Foxb1 Glut
[-]
0629 MM-ant Foxb1 Glut_1
[+]
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[-]
0630 MM Foxb1 Glut_1
[+]
16 HY MM Glut
[-]
144 MM Foxb1 Glut
[-]
0631 MM Foxb1 Glut_2
[+]
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0676 PRC-PAG Pax6 Glut_1
[+]
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0677 PRC-PAG Pax6 Glut_2
[+]
19 MB Glut
[-]
155 PRC-PAG Pax6 Glut
[-]
0678 PRC-PAG Pax6 Glut_3
[+]
19 MB Glut
[-]
156 MB-ant-ve Dmrta2 Glut
[-]
0681 MB-ant-ve Dmrta2 Glut_1
[+]
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0685 IF-RL-CLI-PAG Foxa1 Glut_1
[+]
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0686 IF-RL-CLI-PAG Foxa1 Glut_2
[+]
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0687 IF-RL-CLI-PAG Foxa1 Glut_3
[+]
19 MB Glut
[-]
159 IF-RL-CLI-PAG Foxa1 Glut
[-]
0688 IF-RL-CLI-PAG Foxa1 Glut_4
[+]
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0691 PAG-SC Neurod2 Meis2 Glut_2
[+]
19 MB Glut
[-]
160 PAG-SC Neurod2 Meis2 Glut
[-]
0693 PAG-SC Neurod2 Meis2 Glut_4
[+]
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0694 PAG Pou4f3 Glut_1
[+]
19 MB Glut
[-]
161 PAG Pou4f3 Glut
[-]
0695 PAG Pou4f3 Glut_2
[+]
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0697 CUN Evx2 Lhx2 Glut_1
[+]
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0698 CUN Evx2 Lhx2 Glut_2
[+]
19 MB Glut
[-]
162 CUN Evx2 Lhx2 Glut
[-]
0700 CUN Evx2 Lhx2 Glut_4
[+]
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0704 PAG-MRN Pou3f1 Glut_1
[+]
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0705 PAG-MRN Pou3f1 Glut_2
[+]
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0706 PAG-MRN Pou3f1 Glut_3
[+]
19 MB Glut
[-]
165 PAG-MRN Pou3f1 Glut
[-]
0709 PAG-MRN Pou3f1 Glut_6
[+]
19 MB Glut
[-]
166 MRN Pou3f1 C1ql4 Glut
[-]
0710 MRN Pou3f1 C1ql4 Glut_1
[+]
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0713 PRC-PAG Tcf7l2 Irx2 Glut_1
[+]
19 MB Glut
[-]
167 PRC-PAG Tcf7l2 Irx2 Glut
[-]
0714 PRC-PAG Tcf7l2 Irx2 Glut_2
[+]
19 MB Glut
[-]
169 PAG-SC Pou4f1 Zic1 Glut
[-]
0730 PAG-SC Pou4f1 Zic1 Glut_1
[+]
19 MB Glut
[-]
170 PAG-MRN Tfap2b Glut
[-]
0733 PAG-MRN Tfap2b Glut_1
[+]
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0735 PAG Pou4f1 Bnc2 Glut_1
[+]
19 MB Glut
[-]
171 PAG Pou4f1 Bnc2 Glut
[-]
0736 PAG Pou4f1 Bnc2 Glut_2
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0737 PAG Pou4f1 Ebf2 Glut_1
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0738 PAG Pou4f1 Ebf2 Glut_2
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0739 PAG Pou4f1 Ebf2 Glut_3
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0740 PAG Pou4f1 Ebf2 Glut_4
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0741 PAG Pou4f1 Ebf2 Glut_5
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0742 PAG Pou4f1 Ebf2 Glut_6
[+]
19 MB Glut
[-]
172 PAG Pou4f1 Ebf2 Glut
[-]
0743 PAG Pou4f1 Ebf2 Glut_7
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0745 PAG Pou4f2 Glut_1
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0746 PAG Pou4f2 Glut_2
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0747 PAG Pou4f2 Glut_3
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0748 PAG Pou4f2 Glut_4
[+]
19 MB Glut
[-]
173 PAG Pou4f2 Glut
[-]
0749 PAG Pou4f2 Glut_5
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0750 PAG Pou4f2 Mesi2 Glut_1
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0751 PAG Pou4f2 Mesi2 Glut_2
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0752 PAG Pou4f2 Mesi2 Glut_3
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0754 PAG Pou4f2 Mesi2 Glut_5
[+]
19 MB Glut
[-]
174 PAG Pou4f2 Mesi2 Glut
[-]
0755 PAG Pou4f2 Mesi2 Glut_6
[+]
19 MB Glut
[-]
176 SCig Foxb1 Glut
[-]
0763 SCig Foxb1 Glut_4
[+]
19 MB Glut
[-]
179 SCdg-PAG Tfap2b Glut
[-]
0766 SCdg-PAG Tfap2b Glut_1
[+]
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0777 CUN-PPN Evx2 Meis2 Glut_2
[+]
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0778 CUN-PPN Evx2 Meis2 Glut_3
[+]
19 MB Glut
[-]
182 CUN-PPN Evx2 Meis2 Glut
[-]
0779 CUN-PPN Evx2 Meis2 Glut_4
[+]
19 MB Glut
[-]
190 ND-INC Foxd2 Glut
[-]
0790 ND-INC Foxd2 Glut_1
[+]
20 MB GABA
[-]
191 PAG-MRN Rln3 Gaba
[-]
0791 PAG-MRN Rln3 Gaba_1
[+]
20 MB GABA
[-]
192 PPN-CUN-PCG Otp En1 Gaba
[-]
0792 PPN-CUN-PCG Otp En1 Gaba_1
[+]
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[-]
0795 MRN-PPN-CUN Pax8 Gaba_1
[+]
20 MB GABA
[-]
193 MRN-PPN-CUN Pax8 Gaba
[-]
0796 MRN-PPN-CUN Pax8 Gaba_2
[+]
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[-]
0798 MRN-VTN-PPN Pax5 Cdh23 Gaba_1
[+]
20 MB GABA
[-]
194 MRN-VTN-PPN Pax5 Cdh23 Gaba
[-]
0799 MRN-VTN-PPN Pax5 Cdh23 Gaba_2
[+]
20 MB GABA
[-]
195 SNr-VTA Pax5 Npas1 Gaba
[-]
0800 SNr-VTA Pax5 Npas1 Gaba_1
[+]
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0802 PAG-PPN Pax5 Sox21 Gaba_1
[+]
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0803 PAG-PPN Pax5 Sox21 Gaba_2
[+]
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0804 PAG-PPN Pax5 Sox21 Gaba_3
[+]
20 MB GABA
[-]
196 PAG-PPN Pax5 Sox21 Gaba
[-]
0805 PAG-PPN Pax5 Sox21 Gaba_4
[+]
20 MB GABA
[-]
197 SNr Six3 Gaba
[-]
0806 SNr Six3 Gaba_1
[+]
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0808 IC Six3 En2 Gaba_2
[+]
20 MB GABA
[-]
198 IC Six3 En2 Gaba
[-]
0812 IC Six3 En2 Gaba_6
[+]
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0814 PAG-MRN-RN Foxa2 Gaba_1
[+]
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0815 PAG-MRN-RN Foxa2 Gaba_2
[+]
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0816 PAG-MRN-RN Foxa2 Gaba_3
[+]
20 MB GABA
[-]
199 PAG-MRN-RN Foxa2 Gaba
[-]
0817 PAG-MRN-RN Foxa2 Gaba_4
[+]
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0818 PAG-ND-PCG Onecut1 Gaba_1
[+]
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0819 PAG-ND-PCG Onecut1 Gaba_2
[+]
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0820 PAG-ND-PCG Onecut1 Gaba_3
[+]
20 MB GABA
[-]
200 PAG-ND-PCG Onecut1 Gaba
[-]
0821 PAG-ND-PCG Onecut1 Gaba_4
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0824 PAG-RN Nkx2-2 Otx1 Gaba_2
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0825 PAG-RN Nkx2-2 Otx1 Gaba_3
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0826 PAG-RN Nkx2-2 Otx1 Gaba_4
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0827 PAG-RN Nkx2-2 Otx1 Gaba_5
[+]
20 MB GABA
[-]
201 PAG-RN Nkx2-2 Otx1 Gaba
[-]
0828 PAG-RN Nkx2-2 Otx1 Gaba_6
[+]
20 MB GABA
[-]
202 PRT Tcf7l2 Gaba
[-]
0829 PRT Tcf7l2 Gaba_1
[+]
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[-]
0844 SC-PAG Lef1 Emx2 Gaba_2
[+]
20 MB GABA
[-]
205 SC-PAG Lef1 Emx2 Gaba
[-]
0846 SC-PAG Lef1 Emx2 Gaba_4
[+]
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0848 SCm-PAG Cdh23 Gaba_1
[+]
20 MB GABA
[-]
206 SCm-PAG Cdh23 Gaba
[-]
0850 SCm-PAG Cdh23 Gaba_3
[+]
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0877 IPN Otp Crisp1 Gaba_1
[+]
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0878 IPN Otp Crisp1 Gaba_2
[+]
20 MB GABA
[-]
214 IPN Otp Crisp1 Gaba
[-]
0879 IPN Otp Crisp1 Gaba_3
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0880 SNc-VTA-RAmb Foxa1 Dopa_1
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0881 SNc-VTA-RAmb Foxa1 Dopa_2
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0882 SNc-VTA-RAmb Foxa1 Dopa_3
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0883 SNc-VTA-RAmb Foxa1 Dopa_4
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0884 SNc-VTA-RAmb Foxa1 Dopa_5
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0885 SNc-VTA-RAmb Foxa1 Dopa_6
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0886 SNc-VTA-RAmb Foxa1 Dopa_7
[+]
21 MB Dopa
[-]
215 SNc-VTA-RAmb Foxa1 Dopa
[-]
0887 SNc-VTA-RAmb Foxa1 Dopa_8
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0888 MB-MY Tph2 Glut-Sero_1
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0889 MB-MY Tph2 Glut-Sero_2
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0890 MB-MY Tph2 Glut-Sero_3
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0891 MB-MY Tph2 Glut-Sero_4
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0892 MB-MY Tph2 Glut-Sero_5
[+]
22 MB-HB Sero
[-]
216 MB-MY Tph2 Glut-Sero
[-]
0893 MB-MY Tph2 Glut-Sero_6
[+]
23 P Glut
[-]
220 PB Pax5 Glut
[-]
0904 PB Pax5 Glut_1
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0906 LDT-PCG Vsx2 Lhx4 Glut_1
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0907 LDT-PCG Vsx2 Lhx4 Glut_2
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0908 LDT-PCG Vsx2 Lhx4 Glut_3
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0909 LDT-PCG Vsx2 Lhx4 Glut_4
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0910 LDT-PCG Vsx2 Lhx4 Glut_5
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0911 LDT-PCG Vsx2 Lhx4 Glut_6
[+]
23 P Glut
[-]
221 LDT-PCG Vsx2 Lhx4 Glut
[-]
0912 LDT-PCG Vsx2 Lhx4 Glut_7
[+]
23 P Glut
[-]
223 B-PB Nr4a2 Glut
[-]
0923 B-PB Nr4a2 Glut_1
[+]
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0925 PCG-PRNr Vsx2 Nkx6-1 Glut_1
[+]
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0926 PCG-PRNr Vsx2 Nkx6-1 Glut_2
[+]
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0927 PCG-PRNr Vsx2 Nkx6-1 Glut_3
[+]
23 P Glut
[-]
224 PCG-PRNr Vsx2 Nkx6-1 Glut
[-]
0928 PCG-PRNr Vsx2 Nkx6-1 Glut_4
[+]
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0931 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_1
[+]
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0932 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_2
[+]
23 P Glut
[-]
225 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut
[-]
0933 PRNc-NI-SG-RPO Vsx2 Nr4a2 Glut_3
[+]
23 P Glut
[-]
226 PRNc-PARN Tlx1 Glut
[-]
0935 PRNc-PARN Tlx1 Glut_1
[+]
23 P Glut
[-]
230 PRNr Otp Nfib Glut
[-]
0945 PRNr Otp Nfib Glut_1
[+]
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0946 IPN-LDT Vsx2 Nkx6-1 Glut_1
[+]
23 P Glut
[-]
231 IPN-LDT Vsx2 Nkx6-1 Glut
[-]
0947 IPN-LDT Vsx2 Nkx6-1 Glut_2
[+]
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0948 LDT Vsx2 Nkx6-1 Nfib Glut_1
[+]
23 P Glut
[-]
232 LDT Vsx2 Nkx6-1 Nfib Glut
[-]
0949 LDT Vsx2 Nkx6-1 Nfib Glut_2
[+]
23 P Glut
[-]
235 PG-TRN-LRN Fat2 Glut
[-]
0953 PG-TRN-LRN Fat2 Glut_1
[+]
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0956 PRP-NI-PRNc-GRN Otp Glut_2
[+]
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0957 PRP-NI-PRNc-GRN Otp Glut_3
[+]
24 MY Glut
[-]
237 PRP-NI-PRNc-GRN Otp Glut
[-]
0958 PRP-NI-PRNc-GRN Otp Glut_4
[+]
24 MY Glut
[-]
251 NTS Dbh Glut
[-]
1007 NTS Dbh Glut_4
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1031 CS-RPO Meis2 Gaba_1
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1032 CS-RPO Meis2 Gaba_2
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1033 CS-RPO Meis2 Gaba_3
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1034 CS-RPO Meis2 Gaba_4
[+]
26 P GABA
[-]
263 CS-RPO Meis2 Gaba
[-]
1035 CS-RPO Meis2 Gaba_5
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1036 PRNc Otp Gly-Gaba_1
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1037 PRNc Otp Gly-Gaba_2
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1038 PRNc Otp Gly-Gaba_3
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1039 PRNc Otp Gly-Gaba_4
[+]
26 P GABA
[-]
264 PRNc Otp Gly-Gaba
[-]
1040 PRNc Otp Gly-Gaba_5
[+]
26 P GABA
[-]
265 PB Sst Gly-Gaba
[-]
1041 PB Sst Gly-Gaba_1
[+]
26 P GABA
[-]
266 PRNc Prox1 Brs3 Gly-Gaba
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1043 PRNc Prox1 Brs3 Gly-Gaba_1
[+]
26 P GABA
[-]
267 CS-PRNr-PCG Tmem163 Otp Gaba
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1044 CS-PRNr-PCG Tmem163 Otp Gaba_1
[+]
26 P GABA
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267 CS-PRNr-PCG Tmem163 Otp Gaba
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1045 CS-PRNr-PCG Tmem163 Otp Gaba_2
[+]
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
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1047 CS-PRNr-DR En1 Sox2 Gaba_1
[+]
26 P GABA
[-]
268 CS-PRNr-DR En1 Sox2 Gaba
[-]
1048 CS-PRNr-DR En1 Sox2 Gaba_2
[+]
26 P GABA
[-]
269 LDT Fgf7 Gaba
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1049 LDT Fgf7 Gaba_1
[+]
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
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1050 LDT-DTN Gata3 Nfix Gaba_1
[+]
26 P GABA
[-]
270 LDT-DTN Gata3 Nfix Gaba
[-]
1051 LDT-DTN Gata3 Nfix Gaba_2
[+]
26 P GABA
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271 NI-RPO Gata3 Nr4a2 Gaba
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1052 NI-RPO Gata3 Nr4a2 Gaba_1
[+]
26 P GABA
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271 NI-RPO Gata3 Nr4a2 Gaba
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1053 NI-RPO Gata3 Nr4a2 Gaba_2
[+]
26 P GABA
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271 NI-RPO Gata3 Nr4a2 Gaba
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1055 NI-RPO Gata3 Nr4a2 Gaba_4
[+]
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
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1056 LDT-PCG-CS Gata3 Lhx1 Gaba_1
[+]
26 P GABA
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272 LDT-PCG-CS Gata3 Lhx1 Gaba
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1057 LDT-PCG-CS Gata3 Lhx1 Gaba_2
[+]
26 P GABA
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272 LDT-PCG-CS Gata3 Lhx1 Gaba
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1058 LDT-PCG-CS Gata3 Lhx1 Gaba_3
[+]
26 P GABA
[-]
272 LDT-PCG-CS Gata3 Lhx1 Gaba
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1059 LDT-PCG-CS Gata3 Lhx1 Gaba_4
[+]
26 P GABA
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273 PDTg-PCG Pax6 Gaba
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1061 PDTg-PCG Pax6 Gaba_1
[+]
26 P GABA
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273 PDTg-PCG Pax6 Gaba
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1062 PDTg-PCG Pax6 Gaba_2
[+]
26 P GABA
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273 PDTg-PCG Pax6 Gaba
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1063 PDTg-PCG Pax6 Gaba_3
[+]
26 P GABA
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273 PDTg-PCG Pax6 Gaba
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1064 PDTg-PCG Pax6 Gaba_4
[+]
26 P GABA
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274 PDTg Otp Shroom3 Gaba
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1065 PDTg Otp Shroom3 Gaba_1
[+]
26 P GABA
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275 PDTg Otp Olig3 Gaba
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1066 PDTg Otp Olig3 Gaba_1
[+]
26 P GABA
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276 LDT-PCG St18 Gaba
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1067 LDT-PCG St18 Gaba_1
[+]
26 P GABA
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276 LDT-PCG St18 Gaba
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1068 LDT-PCG St18 Gaba_2
[+]
26 P GABA
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277 DTN-LDT-IPN Otp Pax3 Gaba
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1069 DTN-LDT-IPN Otp Pax3 Gaba_1
[+]
26 P GABA
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277 DTN-LDT-IPN Otp Pax3 Gaba
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1070 DTN-LDT-IPN Otp Pax3 Gaba_2
[+]
26 P GABA
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277 DTN-LDT-IPN Otp Pax3 Gaba
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1071 DTN-LDT-IPN Otp Pax3 Gaba_3
[+]
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
[-]
1072 DTN-LDT-IPN Otp Pax3 Gaba_4
[+]
26 P GABA
[-]
277 DTN-LDT-IPN Otp Pax3 Gaba
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1073 DTN-LDT-IPN Otp Pax3 Gaba_5
[+]
30 Astro-Epen
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318 Astro-NT NN
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1159 Astro-NT NN_1
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30 Astro-Epen
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318 Astro-NT NN
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1160 Astro-NT NN_2
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30 Astro-Epen
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319 Astro-TE NN
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1161 Astro-TE NN_1
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30 Astro-Epen
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319 Astro-TE NN
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1162 Astro-TE NN_2
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30 Astro-Epen
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319 Astro-TE NN
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1163 Astro-TE NN_3
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30 Astro-Epen
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319 Astro-TE NN
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1165 Astro-TE NN_5
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30 Astro-Epen
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321 Astroependymal NN
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1171 Astroependymal NN_3
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30 Astro-Epen
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322 Tanycyte NN
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1173 Tanycyte NN_2
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30 Astro-Epen
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323 Ependymal NN
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1175 Ependymal NN_1
[+]
30 Astro-Epen
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324 Hypendymal NN
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1177 Hypendymal NN_1
[+]
31 OPC-Oligo
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326 OPC NN
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1179 OPC NN_1
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31 OPC-Oligo
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327 Oligo NN
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1181 COP NN_1
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31 OPC-Oligo
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327 Oligo NN
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1182 NFOL NN_2
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31 OPC-Oligo
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327 Oligo NN
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1183 MFOL NN_3
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31 OPC-Oligo
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327 Oligo NN
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1184 MOL NN_4
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33 Vascular
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329 ABC NN
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1186 ABC NN_1
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33 Vascular
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330 VLMC NN
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1187 VLMC NN_1
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33 Vascular
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330 VLMC NN
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1188 VLMC NN_2
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33 Vascular
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331 Peri NN
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1191 Peri NN_1
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33 Vascular
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332 SMC NN
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1192 SMC NN_1
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33 Vascular
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333 Endo NN
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1193 Endo NN_1
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34 Immune
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334 Microglia NN
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1194 Microglia NN_1
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34 Immune
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335 BAM NN
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1195 BAM NN_1
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34 Immune
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337 DC NN
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1197 DC NN_1
[+]
34 Immune
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338 Lymphoid NN
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1201 T cells NN_4
[+]
+ + . + \ No newline at end of file diff --git a/docs/cluster_annotations/create_aging_cluster_annotation_html.ipynb b/docs/cluster_annotations/create_aging_cluster_annotation_html.ipynb new file mode 100644 index 0000000..458263b --- /dev/null +++ b/docs/cluster_annotations/create_aging_cluster_annotation_html.ipynb @@ -0,0 +1,3065 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": 7, + "id": "5fd40a90", + "metadata": {}, + "outputs": [], + "source": [ + "import os\n", + "import pandas as pd\n", + "from pathlib import Path\n", + "import numpy as np\n", + "import anndata\n", + "import time\n", + "import matplotlib.pyplot as plt\n", + "import json\n", + "\n", + "from abc_atlas_access.abc_atlas_cache.abc_project_cache import AbcProjectCache\n", + "\n", + "pd.set_option('display.max_columns', 500)" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "id": "f724b1cc", + "metadata": {}, + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "/allen/aibs/informatics/chris.morrison/miniconda/envs/abc_atlas_access/lib/python3.11/site-packages/abc_atlas_access/abc_atlas_cache/cloud_cache.py:630: OutdatedManifestWarning: You are loading releases/20230830/manifest.json. A more up to date version of the dataset -- releases/20241115/manifest.json -- exists online. To see the changes between the two versions of the dataset, run\n", + "type.compare_manifests('releases/20230830/manifest.json', 'releases/20241115/manifest.json')\n", + "To load another version of the dataset, run\n", + "type.load_manifest('releases/20241115/manifest.json')\n", + " warnings.warn(msg, OutdatedManifestWarning)\n" + ] + } + ], + "source": [ + "version = '20241115'\n", + "download_base = Path('../../../abc_download_root')\n", + "abc_cache = AbcProjectCache.from_s3_cache(download_base)\n", + "abc_cache.load_manifest(f'releases/{version}/manifest.json')" + ] + }, + { + "cell_type": "code", + "execution_count": 10, + "id": "a64dc5da-1741-4b83-86ca-560ced7531b4", + "metadata": {}, + "outputs": [], + "source": [ + "metadata_base = Path(\n", + " \"/allen/programs/celltypes/workgroups/rnaseqanalysis/lydian/mouse_aging_prep/staging/\"\n", + " \"metadata/Zeng-Aging-Mouse-10Xv3/20241130\"\n", + ")\n", + "taxonomy_base = Path(\n", + " \"/allen/programs/celltypes/workgroups/rnaseqanalysis/lydian/mouse_aging_prep/staging/\"\n", + " \"metadata/Zeng-Aging-Mouse-WMB-taxonomy/20241130\"\n", + ")" + ] + }, + { + "cell_type": "markdown", + "id": "6783c606-da49-4561-8ae4-2ebafd216c7e", + "metadata": {}, + "source": [ + "Read in cluster annotation term set dataframe" + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "id": "79058b09-7e9c-431e-82e8-d2db4b273207", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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namedescriptionorder
CCN20230722_NEURneurotransmitterClusters are assigned based on the average exp...0
CCN20230722_CLASclassThe top level of cell type definition in the m...1
CCN20230722_SUBCsubclassThe coarse level of cell type definition in th...2
CCN20230722_SUPTsupertypeThe second finest level of cell type definitio...3
CS20241021_CLUSclusterThe finest level of cell type definition in th...4
\n", + "
" + ], + "text/plain": [ + " name \\\n", + "CCN20230722_NEUR neurotransmitter \n", + "CCN20230722_CLAS class \n", + "CCN20230722_SUBC subclass \n", + "CCN20230722_SUPT supertype \n", + "CS20241021_CLUS cluster \n", + "\n", + " description order \n", + "CCN20230722_NEUR Clusters are assigned based on the average exp... 0 \n", + "CCN20230722_CLAS The top level of cell type definition in the m... 1 \n", + "CCN20230722_SUBC The coarse level of cell type definition in th... 2 \n", + "CCN20230722_SUPT The second finest level of cell type definitio... 3 \n", + "CS20241021_CLUS The finest level of cell type definition in th... 4 " + ] + }, + "execution_count": 6, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "term_sets = abc_cache.get_metadata_dataframe(\n", + " directory='WMB-taxonomy',\n", + " file_name='cluster_annotation_term_set'\n", + ").set_index('label').drop('CCN20230722_CLUS')\n", + "cluster_level = pd.DataFrame(\n", + " data={\"name\": \"cluster\",\n", + " \"description\": \"The finest level of cell type definition in the mouse whole brain taxonomy. Cells within a cluster share similar characteristics and belong to the same supertype.\",\n", + " \"order\": 4},\n", + " index=[\"CS20241021_CLUS\"]\n", + ")\n", + "term_sets = pd.concat([term_sets, cluster_level])\n", + "term_sets" + ] + }, + { + "cell_type": "code", + "execution_count": 17, + "id": "c85cef7b-220a-431e-bbdd-8a4f9036b5bf", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "\u001b[0m\u001b[01;32mcell_annotation_colors.csv\u001b[0m* \u001b[01;32mdonor.csv\u001b[0m*\n", + "\u001b[01;32mcell_cluster_annotations.csv\u001b[0m* \u001b[01;32mexample_genes_all_cells_expression.csv\u001b[0m*\n", + "\u001b[01;32mcell_metadata.csv\u001b[0m* \u001b[01;32mlibrary.csv\u001b[0m*\n", + "\u001b[01;32mcluster.csv\u001b[0m* \u001b[01;32mvalue_sets.csv\u001b[0m*\n" + ] + } + ], + "source": [ + "ls '{metadata_base.resolve()}'" + ] + }, + { + "cell_type": "code", + "execution_count": 14, + "id": "b5940867-52a0-4b3a-9709-c237527484a7", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "\u001b[0m\u001b[01;32maging_degenes.csv\u001b[0m* \u001b[01;32mcluster_mapping.csv\u001b[0m*\n", + "\u001b[01;32mcell_cluster_mapping_annotations.csv\u001b[0m* \u001b[01;32mcluster_mapping_pivot.csv\u001b[0m*\n", + "\u001b[01;32mcell_cross_mapping_annotations.csv\u001b[0m*\n" + ] + } + ], + "source": [ + "ls '{taxonomy_base.resolve()}'" + ] + }, + { + "cell_type": "code", + "execution_count": 75, + "id": "81efb9ef-691a-4c1a-95cc-a8f0a98e1061", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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cluster_aliasnumber_of_cellscluster_labelcluster_ordercluster_namecluster_colornumber_of_adult_cellsnumber_of_aged_cellsproportion_adult_cellsproportion_aged_cellsodds_ratiolog2_odds_ratiocluster_age_biascluster_age_bias_colorneurotransmitter_combined_labelneurotransmitter_labelneurotransmitter_color
01851CS20241021_000101_CLA-EPd-CTX Car3 Glut_1#f7c27a1836680.2150410.7849591.4537970.539826unassigned#DADEDFGlutGlut#2B93DF
12330CS20241021_000212_IT EP-CLA Glut_1#5c1a341601700.4848480.5151520.421595-1.246071unassigned#DADEDFGlutGlut#2B93DF
23589CS20241021_000323_IT EP-CLA Glut_1#b96cf02403490.4074700.5925300.576896-0.793616unassigned#DADEDFGlutGlut#2B93DF
34207CS20241021_000434_IT EP-CLA Glut_1#bff6911071000.5169080.4830920.371035-1.430373unassigned#DADEDFGlutGlut#2B93DF
452141CS20241021_000545_IT EP-CLA Glut_1#39fbfa65514860.3059320.6940680.900735-0.150825unassigned#DADEDFGlutGlut#2B93DF
......................................................
8428432640CS20241021_0843842843_Microglia NN_1#a88b307125690.0268940.97310620.3044394.343723aging-enriched#CD6828No-NTNo-NT#666666
843844771CS20241021_0844843844_Microglia NN_1#df92c32844870.3683530.6316470.911851-0.133131unassigned#DADEDFNo-NTNo-NT#666666
8448453030CS20241021_0845844845_BAM NN_1#a1adea146215680.4825080.5174920.556218-0.846279unassigned#DADEDFNo-NTNo-NT#666666
845846248CS20241021_0846845846_DC NN_1#9a5824981500.3951610.6048390.814133-0.296663unassigned#DADEDFNo-NTNo-NT#666666
846847330CS20241021_0847846847_T cells NN_4#e7e085682620.2060610.7939392.0566921.040326unassigned#DADEDFNo-NTNo-NT#666666
\n", + "

847 rows × 17 columns

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cluster_aliascluster_labelcluster_ordercluster_namecluster_colorcluster_annotation_term_labelcluster_annotation_term_namecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_triplet
01CS20241021_000101_CLA-EPd-CTX Car3 Glut_1#f7c27aCS20230722_SUPT_00010001 CLA-EPd-CTX Car3 Glut_1CCN20230722_SUPTCS20230722_SUBC_001CCN20230722_SUBC30supertype#99822E
12CS20241021_000212_IT EP-CLA Glut_1#5c1a34CS20230722_SUPT_00030003 IT EP-CLA Glut_1CCN20230722_SUPTCS20230722_SUBC_002CCN20230722_SUBC32supertype#994563
23CS20241021_000323_IT EP-CLA Glut_1#b96cf0CS20230722_SUPT_00030003 IT EP-CLA Glut_1CCN20230722_SUPTCS20230722_SUBC_002CCN20230722_SUBC32supertype#994563
34CS20241021_000434_IT EP-CLA Glut_1#bff691CS20230722_SUPT_00030003 IT EP-CLA Glut_1CCN20230722_SUPTCS20230722_SUBC_002CCN20230722_SUBC32supertype#994563
45CS20241021_000545_IT EP-CLA Glut_1#39fbfaCS20230722_SUPT_00030003 IT EP-CLA Glut_1CCN20230722_SUPTCS20230722_SUBC_002CCN20230722_SUBC32supertype#994563
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2536843CS20241021_0843842843_Microglia NN_1#a88b30CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
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2539846CS20241021_0846845846_DC NN_1#9a5824CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
2540847CS20241021_0847846847_T cells NN_4#e7e085CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
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2541 rows × 14 columns

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cluster_aliascluster_labelcluster_ordercluster_namecluster_colorcluster_annotation_term_labelcluster_annotation_term_namecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_triplet
16941CS20241021_000101_CLA-EPd-CTX Car3 Glut_1#f7c27aCS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087
16952CS20241021_000212_IT EP-CLA Glut_1#5c1a34CS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087
16963CS20241021_000323_IT EP-CLA Glut_1#b96cf0CS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087
16974CS20241021_000434_IT EP-CLA Glut_1#bff691CS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087
16985CS20241021_000545_IT EP-CLA Glut_1#39fbfaCS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087
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2536843CS20241021_0843842843_Microglia NN_1#a88b30CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
2537844CS20241021_0844843844_Microglia NN_1#df92c3CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
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2539846CS20241021_0846845846_DC NN_1#9a5824CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
2540847CS20241021_0847846847_T cells NN_4#e7e085CS20230722_CLAS_3434 ImmuneCCN20230722_CLASNaNNaN133class#825f45
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847 rows × 14 columns

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labelnamecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_tripletfirst_child_labelfirst_child_term_set_name
0CS20230722_NEUR_GlutGlutCCN20230722_NEURNaNNaN00neurotransmitter#2B93DFNaNNaN
1CS20230722_NEUR_NANaNCCN20230722_NEURNaNNaN01neurotransmitter#666666NaNNaN
2CS20230722_NEUR_GABAGABACCN20230722_NEURNaNNaN02neurotransmitter#FF3358NaNNaN
3CS20230722_NEUR_DopaDopaCCN20230722_NEURNaNNaN03neurotransmitter#fcf04bNaNNaN
4CS20230722_NEUR_Glut-GABAGlut-GABACCN20230722_NEURNaNNaN04neurotransmitter#0a9964NaNNaN
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" + ], + "text/plain": [ + " label name cluster_annotation_term_set_label \\\n", + "0 CS20230722_NEUR_Glut Glut CCN20230722_NEUR \n", + "1 CS20230722_NEUR_NA NaN CCN20230722_NEUR \n", + "2 CS20230722_NEUR_GABA GABA CCN20230722_NEUR \n", + "3 CS20230722_NEUR_Dopa Dopa CCN20230722_NEUR \n", + "4 CS20230722_NEUR_Glut-GABA Glut-GABA CCN20230722_NEUR \n", + "\n", + " parent_term_label parent_term_set_label term_set_order term_order \\\n", + "0 NaN NaN 0 0 \n", + "1 NaN NaN 0 1 \n", + "2 NaN NaN 0 2 \n", + "3 NaN NaN 0 3 \n", + "4 NaN NaN 0 4 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet first_child_label \\\n", + "0 neurotransmitter #2B93DF NaN \n", + "1 neurotransmitter #666666 NaN \n", + "2 neurotransmitter #FF3358 NaN \n", + "3 neurotransmitter #fcf04b NaN \n", + "4 neurotransmitter #0a9964 NaN \n", + "\n", + " first_child_term_set_name \n", + "0 NaN \n", + "1 NaN \n", + "2 NaN \n", + "3 NaN \n", + "4 NaN " + ] + }, + "execution_count": 76, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "wmb_term = abc_cache.get_metadata_dataframe(directory='WMB-taxonomy', file_name='cluster_annotation_term')\n", + "\n", + "other_term = pd.DataFrame(columns=term.columns)\n", + "other_term.loc[0, 'name'] = 'No-NT'\n", + "other_term.loc[0, 'cluster_annotation_term_set_name'] = 'neurotransmitter'\n", + "other_term.loc[0, 'color_hex_triplet'] = '#666666'\n", + "other_term.loc[0, 'term_set_order'] = 0\n", + "other_term.loc[0, 'term_order'] = 9\n", + "wmb_term = pd.concat([wmb_term, other_term], ignore_index=True)\n", + "\n", + "wmb_term.sort_values(['term_set_order', 'term_order'], inplace=True)\n", + "wmb_term.head()" + ] + }, + { + "cell_type": "code", + "execution_count": 77, + "id": "e6ae3301-60cc-4521-8ceb-4ae9acef271a", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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labelnamecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_tripletfirst_child_labelfirst_child_term_set_name
0CS20230722_NEUR_GlutGlutCCN20230722_NEURNaNNaN00neurotransmitter#2B93DFNaNNaN
1CS20230722_NEUR_NANaNCCN20230722_NEURNaNNaN01neurotransmitter#666666NaNNaN
2CS20230722_NEUR_GABAGABACCN20230722_NEURNaNNaN02neurotransmitter#FF3358NaNNaN
3CS20230722_NEUR_DopaDopaCCN20230722_NEURNaNNaN03neurotransmitter#fcf04bNaNNaN
4CS20230722_NEUR_Glut-GABAGlut-GABACCN20230722_NEURNaNNaN04neurotransmitter#0a9964NaNNaN
\n", + "
" + ], + "text/plain": [ + " label name cluster_annotation_term_set_label \\\n", + "0 CS20230722_NEUR_Glut Glut CCN20230722_NEUR \n", + "1 CS20230722_NEUR_NA NaN CCN20230722_NEUR \n", + "2 CS20230722_NEUR_GABA GABA CCN20230722_NEUR \n", + "3 CS20230722_NEUR_Dopa Dopa CCN20230722_NEUR \n", + "4 CS20230722_NEUR_Glut-GABA Glut-GABA CCN20230722_NEUR \n", + "\n", + " parent_term_label parent_term_set_label term_set_order term_order \\\n", + "0 NaN NaN 0 0 \n", + "1 NaN NaN 0 1 \n", + "2 NaN NaN 0 2 \n", + "3 NaN NaN 0 3 \n", + "4 NaN NaN 0 4 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet first_child_label \\\n", + "0 neurotransmitter #2B93DF NaN \n", + "1 neurotransmitter #666666 NaN \n", + "2 neurotransmitter #FF3358 NaN \n", + "3 neurotransmitter #fcf04b NaN \n", + "4 neurotransmitter #0a9964 NaN \n", + "\n", + " first_child_term_set_name \n", + "0 NaN \n", + "1 NaN \n", + "2 NaN \n", + "3 NaN \n", + "4 NaN " + ] + }, + "execution_count": 77, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "combined_term = []\n", + "for term_set_name in ['neurotransmitter', 'class', 'subclass', 'supertype']:\n", + " sub_term = wmb_term[wmb_term['cluster_annotation_term_set_name'] == term_set_name]\n", + " if term_set_name == 'neurotransmitter':\n", + " combined_term.append(sub_term)\n", + " else:\n", + " combined_term.append(\n", + " sub_term[sub_term['label'].isin(mapping['cluster_annotation_term_label']).to_numpy()]\n", + " )\n", + "term = pd.concat(combined_term).reset_index(drop=True)\n", + "term.head()" + ] + }, + { + "cell_type": "code", + "execution_count": 78, + "id": "2d8f0d72-28a9-4b73-9c1f-3d023775a246", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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labelnamecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_triplet
0CS20241021_00011_CLA-EPd-CTX Car3 Glut_1CS20241021_CLUSCS20230722_SUPT_0001CCN20230722_SUPT40cluster#f7c27a
1CS20241021_00022_IT EP-CLA Glut_1CS20241021_CLUSCS20230722_SUPT_0003CCN20230722_SUPT41cluster#5c1a34
2CS20241021_00033_IT EP-CLA Glut_1CS20241021_CLUSCS20230722_SUPT_0003CCN20230722_SUPT42cluster#b96cf0
3CS20241021_00044_IT EP-CLA Glut_1CS20241021_CLUSCS20230722_SUPT_0003CCN20230722_SUPT43cluster#bff691
4CS20241021_00055_IT EP-CLA Glut_1CS20241021_CLUSCS20230722_SUPT_0003CCN20230722_SUPT44cluster#39fbfa
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" + ], + "text/plain": [ + " label name \\\n", + "0 CS20241021_0001 1_CLA-EPd-CTX Car3 Glut_1 \n", + "1 CS20241021_0002 2_IT EP-CLA Glut_1 \n", + "2 CS20241021_0003 3_IT EP-CLA Glut_1 \n", + "3 CS20241021_0004 4_IT EP-CLA Glut_1 \n", + "4 CS20241021_0005 5_IT EP-CLA Glut_1 \n", + "\n", + " cluster_annotation_term_set_label parent_term_label \\\n", + "0 CS20241021_CLUS CS20230722_SUPT_0001 \n", + "1 CS20241021_CLUS CS20230722_SUPT_0003 \n", + "2 CS20241021_CLUS CS20230722_SUPT_0003 \n", + "3 CS20241021_CLUS CS20230722_SUPT_0003 \n", + "4 CS20241021_CLUS CS20230722_SUPT_0003 \n", + "\n", + " parent_term_set_label term_set_order term_order \\\n", + "0 CCN20230722_SUPT 4 0 \n", + "1 CCN20230722_SUPT 4 1 \n", + "2 CCN20230722_SUPT 4 2 \n", + "3 CCN20230722_SUPT 4 3 \n", + "4 CCN20230722_SUPT 4 4 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet \n", + "0 cluster #f7c27a \n", + "1 cluster #5c1a34 \n", + "2 cluster #b96cf0 \n", + "3 cluster #bff691 \n", + "4 cluster #39fbfa " + ] + }, + "execution_count": 78, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "cluster_term_set = pd.DataFrame()\n", + "supertype_mapping = mapping[mapping['cluster_annotation_term_set_name'] == 'supertype']\n", + "cluster_term_set['label'] = supertype_mapping['cluster_label']\n", + "cluster_term_set['name'] = supertype_mapping['cluster_name']\n", + "cluster_term_set['cluster_annotation_term_set_label'] = 'CS20241021_CLUS'\n", + "cluster_term_set['parent_term_label'] = supertype_mapping['cluster_annotation_term_label']\n", + "cluster_term_set['parent_term_set_label'] = supertype_mapping['cluster_annotation_term_set_label']\n", + "cluster_term_set['term_set_order'] = 4\n", + "cluster_term_set['term_order'] = supertype_mapping['cluster_order']\n", + "cluster_term_set['cluster_annotation_term_set_name'] = 'cluster'\n", + "cluster_term_set['color_hex_triplet'] = supertype_mapping['cluster_color']\n", + "cluster_term_set.head()" + ] + }, + { + "cell_type": "code", + "execution_count": 79, + "id": "db4d238d-425c-42b5-9fa0-c9f2f55c9ba4", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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labelnamecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_tripletfirst_child_labelfirst_child_term_set_name
0CS20230722_NEUR_GlutGlutCCN20230722_NEURNaNNaN00neurotransmitter#2B93DFNaNNaN
1CS20230722_NEUR_NANaNCCN20230722_NEURNaNNaN01neurotransmitter#666666NaNNaN
2CS20230722_NEUR_GABAGABACCN20230722_NEURNaNNaN02neurotransmitter#FF3358NaNNaN
3CS20230722_NEUR_DopaDopaCCN20230722_NEURNaNNaN03neurotransmitter#fcf04bNaNNaN
4CS20230722_NEUR_Glut-GABAGlut-GABACCN20230722_NEURNaNNaN04neurotransmitter#0a9964NaNNaN
....................................
1482CS20241021_0843843_Microglia NN_1CS20241021_CLUSCS20230722_SUPT_1194CCN20230722_SUPT4842cluster#a88b30NaNNaN
1483CS20241021_0844844_Microglia NN_1CS20241021_CLUSCS20230722_SUPT_1194CCN20230722_SUPT4843cluster#df92c3NaNNaN
1484CS20241021_0845845_BAM NN_1CS20241021_CLUSCS20230722_SUPT_1195CCN20230722_SUPT4844cluster#a1adeaNaNNaN
1485CS20241021_0846846_DC NN_1CS20241021_CLUSCS20230722_SUPT_1197CCN20230722_SUPT4845cluster#9a5824NaNNaN
1486CS20241021_0847847_T cells NN_4CS20241021_CLUSCS20230722_SUPT_1201CCN20230722_SUPT4846cluster#e7e085NaNNaN
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1487 rows × 11 columns

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" + ], + "text/plain": [ + " label name \\\n", + "0 CS20230722_NEUR_Glut Glut \n", + "1 CS20230722_NEUR_NA NaN \n", + "2 CS20230722_NEUR_GABA GABA \n", + "3 CS20230722_NEUR_Dopa Dopa \n", + "4 CS20230722_NEUR_Glut-GABA Glut-GABA \n", + "... ... ... \n", + "1482 CS20241021_0843 843_Microglia NN_1 \n", + "1483 CS20241021_0844 844_Microglia NN_1 \n", + "1484 CS20241021_0845 845_BAM NN_1 \n", + "1485 CS20241021_0846 846_DC NN_1 \n", + "1486 CS20241021_0847 847_T cells NN_4 \n", + "\n", + " cluster_annotation_term_set_label parent_term_label \\\n", + "0 CCN20230722_NEUR NaN \n", + "1 CCN20230722_NEUR NaN \n", + "2 CCN20230722_NEUR NaN \n", + "3 CCN20230722_NEUR NaN \n", + "4 CCN20230722_NEUR NaN \n", + "... ... ... \n", + "1482 CS20241021_CLUS CS20230722_SUPT_1194 \n", + "1483 CS20241021_CLUS CS20230722_SUPT_1194 \n", + "1484 CS20241021_CLUS CS20230722_SUPT_1195 \n", + "1485 CS20241021_CLUS CS20230722_SUPT_1197 \n", + "1486 CS20241021_CLUS CS20230722_SUPT_1201 \n", + "\n", + " parent_term_set_label term_set_order term_order \\\n", + "0 NaN 0 0 \n", + "1 NaN 0 1 \n", + "2 NaN 0 2 \n", + "3 NaN 0 3 \n", + "4 NaN 0 4 \n", + "... ... ... ... \n", + "1482 CCN20230722_SUPT 4 842 \n", + "1483 CCN20230722_SUPT 4 843 \n", + "1484 CCN20230722_SUPT 4 844 \n", + "1485 CCN20230722_SUPT 4 845 \n", + "1486 CCN20230722_SUPT 4 846 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet first_child_label \\\n", + "0 neurotransmitter #2B93DF NaN \n", + "1 neurotransmitter #666666 NaN \n", + "2 neurotransmitter #FF3358 NaN \n", + "3 neurotransmitter #fcf04b NaN \n", + "4 neurotransmitter #0a9964 NaN \n", + "... ... ... ... \n", + "1482 cluster #a88b30 NaN \n", + "1483 cluster #df92c3 NaN \n", + "1484 cluster #a1adea NaN \n", + "1485 cluster #9a5824 NaN \n", + "1486 cluster #e7e085 NaN \n", + "\n", + " first_child_term_set_name \n", + "0 NaN \n", + "1 NaN \n", + "2 NaN \n", + "3 NaN \n", + "4 NaN \n", + "... ... \n", + "1482 NaN \n", + "1483 NaN \n", + "1484 NaN \n", + "1485 NaN \n", + "1486 NaN \n", + "\n", + "[1487 rows x 11 columns]" + ] + }, + "execution_count": 79, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "term = pd.concat([term, cluster_term_set]).reset_index(drop=True).sort_values(['term_set_order', 'term_order'])\n", + "term" + ] + }, + { + "cell_type": "markdown", + "id": "971d64c9", + "metadata": {}, + "source": [ + "Read in cluster annotation term dataframe. Spike in a row to handle unassigned neurotransmitter clusters." + ] + }, + { + "cell_type": "markdown", + "id": "11f42379-681e-4a88-974d-0c4c3639b32e", + "metadata": {}, + "source": [ + "Find and store first child for each term" + ] + }, + { + "cell_type": "code", + "execution_count": 80, + "id": "20880793", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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labelnameterm_ordercluster_annotation_term_set_name
parent_term_label
CS20230722_CLAS_01CS20230722_SUBC_001001 CLA-EPd-CTX Car3 Glut0subclass
CS20230722_CLAS_02CS20230722_SUBC_028028 L6b/CT ENT Glut27subclass
CS20230722_CLAS_03CS20230722_SUBC_036036 HPF CR Glut35subclass
CS20230722_CLAS_04CS20230722_SUBC_037037 DG Glut36subclass
CS20230722_CLAS_05CS20230722_SUBC_045045 OB-STR-CTX Inh IMN44subclass
...............
CS20230722_SUPT_1193CS20241021_0833833_Endo NN_1832cluster
CS20230722_SUPT_1194CS20241021_0840840_Microglia NN_1839cluster
CS20230722_SUPT_1195CS20241021_0845845_BAM NN_1844cluster
CS20230722_SUPT_1197CS20241021_0846846_DC NN_1845cluster
CS20230722_SUPT_1201CS20241021_0847847_T cells NN_4846cluster
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629 rows × 4 columns

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" + ], + "text/plain": [ + " label name \\\n", + "parent_term_label \n", + "CS20230722_CLAS_01 CS20230722_SUBC_001 001 CLA-EPd-CTX Car3 Glut \n", + "CS20230722_CLAS_02 CS20230722_SUBC_028 028 L6b/CT ENT Glut \n", + "CS20230722_CLAS_03 CS20230722_SUBC_036 036 HPF CR Glut \n", + "CS20230722_CLAS_04 CS20230722_SUBC_037 037 DG Glut \n", + "CS20230722_CLAS_05 CS20230722_SUBC_045 045 OB-STR-CTX Inh IMN \n", + "... ... ... \n", + "CS20230722_SUPT_1193 CS20241021_0833 833_Endo NN_1 \n", + "CS20230722_SUPT_1194 CS20241021_0840 840_Microglia NN_1 \n", + "CS20230722_SUPT_1195 CS20241021_0845 845_BAM NN_1 \n", + "CS20230722_SUPT_1197 CS20241021_0846 846_DC NN_1 \n", + "CS20230722_SUPT_1201 CS20241021_0847 847_T cells NN_4 \n", + "\n", + " term_order cluster_annotation_term_set_name \n", + "parent_term_label \n", + "CS20230722_CLAS_01 0 subclass \n", + "CS20230722_CLAS_02 27 subclass \n", + "CS20230722_CLAS_03 35 subclass \n", + "CS20230722_CLAS_04 36 subclass \n", + "CS20230722_CLAS_05 44 subclass \n", + "... ... ... \n", + "CS20230722_SUPT_1193 832 cluster \n", + "CS20230722_SUPT_1194 839 cluster \n", + "CS20230722_SUPT_1195 844 cluster \n", + "CS20230722_SUPT_1197 845 cluster \n", + "CS20230722_SUPT_1201 846 cluster \n", + "\n", + "[629 rows x 4 columns]" + ] + }, + "execution_count": 80, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "filtered = term[pd.notna(term['parent_term_label'])]\n", + "first_child = filtered.groupby('parent_term_label')[['label','name','term_order','cluster_annotation_term_set_name']].first()\n", + "first_child" + ] + }, + { + "cell_type": "code", + "execution_count": 81, + "id": "139554a5", + "metadata": {}, + "outputs": [], + "source": [ + "term.set_index('label',inplace=True)\n", + "term.loc[first_child.index,'first_child_label'] = first_child['label']\n", + "term.loc[first_child.index,'first_child_term_set_name'] = first_child['cluster_annotation_term_set_name']\n", + "term.reset_index(inplace=True)" + ] + }, + { + "cell_type": "code", + "execution_count": 82, + "id": "bbfe5c98", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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labelnamecluster_annotation_term_set_labelparent_term_labelparent_term_set_labelterm_set_orderterm_ordercluster_annotation_term_set_namecolor_hex_tripletfirst_child_labelfirst_child_term_set_name
11CS20230722_CLAS_0101 IT-ET GlutCCN20230722_CLASNaNNaN10class#FA0087CS20230722_SUBC_001subclass
12CS20230722_CLAS_0202 NP-CT-L6b GlutCCN20230722_CLASNaNNaN11class#61e2a4CS20230722_SUBC_028subclass
13CS20230722_CLAS_0303 OB-CR GlutCCN20230722_CLASNaNNaN12class#D00000CS20230722_SUBC_036subclass
14CS20230722_CLAS_0404 DG-IMN GlutCCN20230722_CLASNaNNaN13class#16f2f2CS20230722_SUBC_037subclass
15CS20230722_CLAS_0505 OB-IMN GABACCN20230722_CLASNaNNaN14class#1b4332CS20230722_SUBC_045subclass
\n", + "
" + ], + "text/plain": [ + " label name cluster_annotation_term_set_label \\\n", + "11 CS20230722_CLAS_01 01 IT-ET Glut CCN20230722_CLAS \n", + "12 CS20230722_CLAS_02 02 NP-CT-L6b Glut CCN20230722_CLAS \n", + "13 CS20230722_CLAS_03 03 OB-CR Glut CCN20230722_CLAS \n", + "14 CS20230722_CLAS_04 04 DG-IMN Glut CCN20230722_CLAS \n", + "15 CS20230722_CLAS_05 05 OB-IMN GABA CCN20230722_CLAS \n", + "\n", + " parent_term_label parent_term_set_label term_set_order term_order \\\n", + "11 NaN NaN 1 0 \n", + "12 NaN NaN 1 1 \n", + "13 NaN NaN 1 2 \n", + "14 NaN NaN 1 3 \n", + "15 NaN NaN 1 4 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet first_child_label \\\n", + "11 class #FA0087 CS20230722_SUBC_001 \n", + "12 class #61e2a4 CS20230722_SUBC_028 \n", + "13 class #D00000 CS20230722_SUBC_036 \n", + "14 class #16f2f2 CS20230722_SUBC_037 \n", + "15 class #1b4332 CS20230722_SUBC_045 \n", + "\n", + " first_child_term_set_name \n", + "11 subclass \n", + "12 subclass \n", + "13 subclass \n", + "14 subclass \n", + "15 subclass " + ] + }, + "execution_count": 82, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "term[pd.notna(term['first_child_label'])].head(5)" + ] + }, + { + "cell_type": "code", + "execution_count": 91, + "id": "09ddcbe6-2932-498d-8039-90cdaa9b4a20", + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "array(['01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut',\n", + " '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET Glut', '01 IT-ET 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MB-HB Sero', '22 MB-HB Sero', '22 MB-HB Sero', '22 MB-HB Sero',\n", + " '22 MB-HB Sero', '22 MB-HB Sero', '22 MB-HB Sero', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut', '23 P Glut',\n", + " '23 P Glut', '23 P Glut', '23 P Glut', '24 MY Glut', '24 MY Glut',\n", + " '24 MY Glut', '24 MY Glut', '24 MY Glut', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA', '26 P GABA',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen', '30 Astro-Epen',\n", + " '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo',\n", + " '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo',\n", + " '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo',\n", + " '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo', '31 OPC-Oligo',\n", + " '31 OPC-Oligo', '31 OPC-Oligo', '33 Vascular', '33 Vascular',\n", + " '33 Vascular', '33 Vascular', '33 Vascular', '33 Vascular',\n", + " '33 Vascular', '33 Vascular', '33 Vascular', '33 Vascular',\n", + " '33 Vascular', '33 Vascular', '33 Vascular', '33 Vascular',\n", + " '33 Vascular', '33 Vascular', '33 Vascular', '33 Vascular',\n", + " '33 Vascular', '33 Vascular', '34 Immune', '34 Immune',\n", + " '34 Immune', '34 Immune', '34 Immune', '34 Immune', '34 Immune',\n", + " '34 Immune'], dtype=object)" + ] + }, + "execution_count": 91, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "mapping[mapping['cluster_annotation_term_set_name'] == 'class']['cluster_annotation_term_name'].to_numpy()" + ] + }, + { + "cell_type": "code", + "execution_count": 92, + "id": "0ce246b8-c1b2-46a0-a9bc-5e0b3e5da8f5", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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cluster_aliasneurotransmitterclasssubclasssupertypecluster
01Glut01 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_11_CLA-EPd-CTX Car3 Glut_1
12Glut01 IT-ET Glut002 IT EP-CLA Glut0003 IT EP-CLA Glut_12_IT EP-CLA Glut_1
23Glut01 IT-ET Glut002 IT EP-CLA Glut0003 IT EP-CLA Glut_13_IT EP-CLA Glut_1
34Glut01 IT-ET Glut002 IT EP-CLA Glut0003 IT EP-CLA Glut_14_IT EP-CLA Glut_1
45Glut01 IT-ET Glut002 IT EP-CLA Glut0003 IT EP-CLA Glut_15_IT EP-CLA Glut_1
.....................
842843No-NT34 Immune334 Microglia NN1194 Microglia NN_1843_Microglia NN_1
843844No-NT34 Immune334 Microglia NN1194 Microglia NN_1844_Microglia NN_1
844845No-NT34 Immune335 BAM NN1195 BAM NN_1845_BAM NN_1
845846No-NT34 Immune337 DC NN1197 DC NN_1846_DC NN_1
846847No-NT34 Immune338 Lymphoid NN1201 T cells NN_4847_T cells NN_4
\n", + "

847 rows × 6 columns

\n", + "
" + ], + "text/plain": [ + " cluster_alias neurotransmitter class subclass \\\n", + "0 1 Glut 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut \n", + "1 2 Glut 01 IT-ET Glut 002 IT EP-CLA Glut \n", + "2 3 Glut 01 IT-ET Glut 002 IT EP-CLA Glut \n", + "3 4 Glut 01 IT-ET Glut 002 IT EP-CLA Glut \n", + "4 5 Glut 01 IT-ET Glut 002 IT EP-CLA Glut \n", + ".. ... ... ... ... \n", + "842 843 No-NT 34 Immune 334 Microglia NN \n", + "843 844 No-NT 34 Immune 334 Microglia NN \n", + "844 845 No-NT 34 Immune 335 BAM NN \n", + "845 846 No-NT 34 Immune 337 DC NN \n", + "846 847 No-NT 34 Immune 338 Lymphoid NN \n", + "\n", + " supertype cluster \n", + "0 0001 CLA-EPd-CTX Car3 Glut_1 1_CLA-EPd-CTX Car3 Glut_1 \n", + "1 0003 IT EP-CLA Glut_1 2_IT EP-CLA Glut_1 \n", + "2 0003 IT EP-CLA Glut_1 3_IT EP-CLA Glut_1 \n", + "3 0003 IT EP-CLA Glut_1 4_IT EP-CLA Glut_1 \n", + "4 0003 IT EP-CLA Glut_1 5_IT EP-CLA Glut_1 \n", + ".. ... ... \n", + "842 1194 Microglia NN_1 843_Microglia NN_1 \n", + "843 1194 Microglia NN_1 844_Microglia NN_1 \n", + "844 1195 BAM NN_1 845_BAM NN_1 \n", + "845 1197 DC NN_1 846_DC NN_1 \n", + "846 1201 T cells NN_4 847_T cells NN_4 \n", + "\n", + "[847 rows x 6 columns]" + ] + }, + "execution_count": 92, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "cluster_to_cluster_annotation = pd.DataFrame()\n", + "cluster_to_cluster_annotation['cluster_alias'] = cluster['cluster_alias']\n", + "cluster_to_cluster_annotation['neurotransmitter'] = cluster['neurotransmitter_label']\n", + "for term_name in ['class', 'subclass', 'supertype']:\n", + " cluster_to_cluster_annotation[term_name] = mapping[\n", + " mapping['cluster_annotation_term_set_name'] == term_name\n", + " ]['cluster_annotation_term_name'].to_numpy()\n", + "cluster_to_cluster_annotation['cluster'] = cluster['cluster_name']\n", + "cluster_to_cluster_annotation = cluster_to_cluster_annotation.sort_values(['class', 'subclass', 'supertype', 'cluster'])\n", + "cluster_to_cluster_annotation" + ] + }, + { + "cell_type": "markdown", + "id": "d8b94400", + "metadata": {}, + "source": [ + "Read in the cluster annotation term name pivot table and sort it" + ] + }, + { + "cell_type": "markdown", + "id": "54b2e9b1", + "metadata": {}, + "source": [ + "Create a lookup by name dataframes for each term set" + ] + }, + { + "cell_type": "code", + "execution_count": 93, + "id": "e46b1340", + "metadata": {}, + "outputs": [], + "source": [ + "lookup = {}\n", + "for tag in term_sets['name']:\n", + " #print(tag)\n", + " pred = (term['cluster_annotation_term_set_name'] == tag)\n", + " filtered = term[pred].copy()\n", + " filtered.set_index('name', inplace=True)\n", + " lookup[tag] = filtered" + ] + }, + { + "cell_type": "markdown", + "id": "24fde774", + "metadata": {}, + "source": [ + "Helper functions to lookup an term attribut and format a cell in the html table" + ] + }, + { + "cell_type": "code", + "execution_count": 94, + "id": "27828465", + "metadata": {}, + "outputs": [], + "source": [ + "def get_value(c, n, v) :\n", + " return lookup[c].loc[n][v]\n", + "\n", + "def format_cell (df,c,add_id=False,add_plus=False,add_minus=False) :\n", + "\n", + " divs = pd.DataFrame(index=df.index)\n", + " \n", + " pattern = '
'\n", + " divs['circle'] = [pattern % get_value(c,x,'color_hex_triplet') for x in df[c]]\n", + " \n", + " pattern = '
%s
'\n", + " divs['name'] = [pattern % x for x in df[c]]\n", + " \n", + " divs['id'] = ''\n", + " if add_id :\n", + " pattern = '
'\n", + " divs['id'] = [pattern % get_value(c,x,'label') for x in df[c]]\n", + " \n", + " divs['plus'] = ''\n", + " if add_plus :\n", + " pattern = '
[+]
'\n", + " divs['plus'] = [pattern % (get_value(c,x,'first_child_term_set_name'),\n", + " get_value(c,x,'first_child_label')) for x in df[c]]\n", + " \n", + " divs['minus'] = ''\n", + " if add_minus :\n", + " pattern = '
[-]
'\n", + " divs['minus'] = [pattern % (get_value(c,x,'cluster_annotation_term_set_name'),\n", + " get_value(c,x,'label')) for x in df[c]]\n", + " \n", + " cols = ['id','circle','name','plus','minus']\n", + " output = divs[cols].apply(lambda row: ''.join(row.values.astype(str)), axis=1)\n", + " return output\n" + ] + }, + { + "cell_type": "markdown", + "id": "4d68d33a", + "metadata": {}, + "source": [ + "Helper function to create html document" + ] + }, + { + "cell_type": "code", + "execution_count": 95, + "id": "1cf1afdc", + "metadata": {}, + "outputs": [], + "source": [ + "def create_html(df, ts, file, title):\n", + " \n", + " # apply formatter to each term set\n", + " df_formatted = df.copy()\n", + " \n", + " for tag in term_sets['name'] :\n", + " if tag in df_formatted.columns :\n", + " \n", + " add_id = False\n", + " if tag == ts :\n", + " add_id = True\n", + " \n", + " add_plus = False\n", + " if tag == ts and tag not in ('cluster', 'neurotransmitter', 'division') :\n", + " add_plus = True\n", + " \n", + " add_minus = False\n", + " if tag != ts and tag not in ('neurotransmitter') :\n", + " add_minus = True\n", + " \n", + " df_formatted[tag] = format_cell(df,tag,add_id,add_plus,add_minus)\n", + " \n", + " \n", + " output = df_formatted.to_html(index=False, na_rep='',\n", + " render_links=True,escape=False,\n", + " classes=\"mystyle\")\n", + "\n", + " html_string = '''\n", + " \n", + " %s\n", + " \n", + " \n", + " {table}\n", + " \n", + " .\n", + " ''' % title\n", + "\n", + " # OUTPUT AN HTML FILE\n", + " with open(file, 'w') as f:\n", + " f.write(html_string.format(table=output))" + ] + }, + { + "cell_type": "code", + "execution_count": 96, + "id": "f560131e", + "metadata": {}, + "outputs": [], + "source": [ + "# Write the data to the _static directory of the abc_atlas_access so that links work properly in the jupyter-book/sphinx page.\n", + "output_directory = os.path.join('../../_static', 'Zeng-Aging-Mouse-taxonomy', version)\n", + "os.makedirs(output_directory, exist_ok=True)" + ] + }, + { + "cell_type": "code", + "execution_count": 100, + "id": "e5668897", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "25\n" + ] + } + ], + "source": [ + "df_supertype = cluster_to_cluster_annotation[['class']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'class.html')\n", + "title = 'Zeng-Aging-Mouse-taxonmy: cell type classes'\n", + "create_html(df_supertype, 'class',file, title)\n", + "print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": 101, + "id": "e7766814", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "172\n" + ] + } + ], + "source": [ + "df_supertype = cluster_to_cluster_annotation[['class','subclass']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'subclass.html')\n", + "title = 'Zeng-Aging-Mouse-taxonmy: cell type subclasses'\n", + "create_html(df_supertype, 'subclass',file, title)\n", + "print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": 102, + "id": "74417b86", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "432\n" + ] + } + ], + "source": [ + "df_supertype = cluster_to_cluster_annotation[['class','subclass','supertype']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'supertype.html')\n", + "title = 'Zeng-Aging-Mouse-taxonmy: cell type supertypes'\n", + "create_html(df_supertype, 'supertype',file, title)\n", + "print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": 104, + "id": "5040f7f2", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "847\n" + ] + } + ], + "source": [ + "df_supertype = cluster_to_cluster_annotation[['class','subclass','supertype','cluster','neurotransmitter']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'cluster.html')\n", + "title = 'Zeng-Aging-Mouse-taxonmy: cell type clusters'\n", + "create_html(df_supertype,'cluster',file, title)\n", + "print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": 18, + "id": "37ee951a", + "metadata": {}, + "outputs": [], + "source": [ + "if version == '20230630' :\n", + " df_supertype = df_sorted[['division']].copy()\n", + " df_supertype.drop_duplicates(inplace=True)\n", + "\n", + " file = os.path.join(output_directory,'division.html')\n", + " title = 'WMB-taxonmy: cell type division'\n", + " create_html(df_supertype, 'division', file, title)\n", + " print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": 105, + "id": "bd36dd14", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "9\n" + ] + } + ], + "source": [ + "df_supertype = cluster_to_cluster_annotation[['neurotransmitter']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'neurotransmitter.html')\n", + "title = 'Zeng-Aging-Mouse-taxonmy: neurotransmitter types'\n", + "create_html(df_supertype, 'neurotransmitter', file, title)\n", + "print(len(df_supertype))" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "944ed0eb", + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3 (ipykernel)", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.11.10" + } + }, + "nbformat": 4, + "nbformat_minor": 5 +} diff --git a/docs/cluster_annotations/create_cluster_annotation_html.ipynb b/docs/cluster_annotations/create_cluster_annotation_html.ipynb index 8e9b317..46a607b 100644 --- a/docs/cluster_annotations/create_cluster_annotation_html.ipynb +++ b/docs/cluster_annotations/create_cluster_annotation_html.ipynb @@ -29,10 +29,10 @@ "name": "stderr", "output_type": "stream", "text": [ - "/Users/chris.morrison/src/abc_atlas_access/src/abc_atlas_access/abc_atlas_cache/cloud_cache.py:622: OutdatedManifestWarning: You are loading releases/20230630/manifest.json. A more up to date version of the dataset -- releases/20231215/manifest.json -- exists online. To see the changes between the two versions of the dataset, run\n", - "type.compare_manifests('releases/20230630/manifest.json', 'releases/20231215/manifest.json')\n", + "/allen/aibs/informatics/chris.morrison/miniconda/envs/abc_atlas_access/lib/python3.11/site-packages/abc_atlas_access/abc_atlas_cache/cloud_cache.py:630: OutdatedManifestWarning: You are loading releases/20230830/manifest.json. A more up to date version of the dataset -- releases/20241115/manifest.json -- exists online. To see the changes between the two versions of the dataset, run\n", + "type.compare_manifests('releases/20230830/manifest.json', 'releases/20241115/manifest.json')\n", "To load another version of the dataset, run\n", - "type.load_manifest('releases/20231215/manifest.json')\n", + "type.load_manifest('releases/20241115/manifest.json')\n", " warnings.warn(msg, OutdatedManifestWarning)\n" ] } @@ -191,7 +191,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": 20, "id": "25e594dc-7b6e-4bad-b04e-85a57fcf07d6", "metadata": {}, "outputs": [ @@ -225,6 +225,8 @@ " term_order\n", " cluster_annotation_term_set_name\n", " color_hex_triplet\n", + " first_child_label\n", + " first_child_term_set_name\n", " \n", " \n", " \n", @@ -239,6 +241,8 @@ " 0\n", " neurotransmitter\n", " #2B93DF\n", + " NaN\n", + " NaN\n", " \n", " \n", " 1\n", @@ -251,6 +255,8 @@ " 1\n", " neurotransmitter\n", " #666666\n", + " NaN\n", + " NaN\n", " \n", " \n", " 2\n", @@ -263,6 +269,8 @@ " 2\n", " neurotransmitter\n", " #FF3358\n", + " NaN\n", + " NaN\n", " \n", " \n", " 3\n", @@ -275,6 +283,8 @@ " 3\n", " neurotransmitter\n", " #fcf04b\n", + " NaN\n", + " NaN\n", " \n", " \n", " 4\n", @@ -287,41 +297,158 @@ " 4\n", " neurotransmitter\n", " #0a9964\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 5\n", + " CS20230722_NEUR_Chol\n", + " Chol\n", + " CCN20230722_NEUR\n", + " NaN\n", + " NaN\n", + " 0\n", + " 5\n", + " neurotransmitter\n", + " #73E785\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 6\n", + " CS20230722_NEUR_Hist\n", + " Hist\n", + " CCN20230722_NEUR\n", + " NaN\n", + " NaN\n", + " 0\n", + " 6\n", + " neurotransmitter\n", + " #ff7621\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 7\n", + " CS20230722_NEUR_GABA-Glyc\n", + " GABA-Glyc\n", + " CCN20230722_NEUR\n", + " NaN\n", + " NaN\n", + " 0\n", + " 7\n", + " neurotransmitter\n", + " #820e57\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 8\n", + " CS20230722_NEUR_Sero\n", + " Sero\n", + " CCN20230722_NEUR\n", + " NaN\n", + " NaN\n", + " 0\n", + " 8\n", + " neurotransmitter\n", + " #533691\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 9\n", + " CS20230722_NEUR_Nora\n", + " Nora\n", + " CCN20230722_NEUR\n", + " NaN\n", + " NaN\n", + " 0\n", + " 9\n", + " neurotransmitter\n", + " #03EDFF\n", + " NaN\n", + " NaN\n", + " \n", + " \n", + " 10\n", + " NaN\n", + " Other\n", + " NaN\n", + " NaN\n", + " NaN\n", + " 0\n", + " 9\n", + " neurotransmitter\n", + " #ebebeb\n", + " NaN\n", + " NaN\n", " \n", " \n", "\n", "" ], "text/plain": [ - " label name cluster_annotation_term_set_label \\\n", - "0 CS20230722_NEUR_Glut Glut CCN20230722_NEUR \n", - "1 CS20230722_NEUR_NA NaN CCN20230722_NEUR \n", - "2 CS20230722_NEUR_GABA GABA CCN20230722_NEUR \n", - "3 CS20230722_NEUR_Dopa Dopa CCN20230722_NEUR \n", - "4 CS20230722_NEUR_Glut-GABA Glut-GABA CCN20230722_NEUR \n", + " label name cluster_annotation_term_set_label \\\n", + "0 CS20230722_NEUR_Glut Glut CCN20230722_NEUR \n", + "1 CS20230722_NEUR_NA NaN CCN20230722_NEUR \n", + "2 CS20230722_NEUR_GABA GABA CCN20230722_NEUR \n", + "3 CS20230722_NEUR_Dopa Dopa CCN20230722_NEUR \n", + "4 CS20230722_NEUR_Glut-GABA Glut-GABA CCN20230722_NEUR \n", + "5 CS20230722_NEUR_Chol Chol CCN20230722_NEUR \n", + "6 CS20230722_NEUR_Hist Hist CCN20230722_NEUR \n", + "7 CS20230722_NEUR_GABA-Glyc GABA-Glyc CCN20230722_NEUR \n", + "8 CS20230722_NEUR_Sero Sero CCN20230722_NEUR \n", + "9 CS20230722_NEUR_Nora Nora CCN20230722_NEUR \n", + "10 NaN Other NaN \n", "\n", - " parent_term_label parent_term_set_label term_set_order term_order \\\n", - "0 NaN NaN 0 0 \n", - "1 NaN NaN 0 1 \n", - "2 NaN NaN 0 2 \n", - "3 NaN NaN 0 3 \n", - "4 NaN NaN 0 4 \n", + " parent_term_label parent_term_set_label term_set_order term_order \\\n", + "0 NaN NaN 0 0 \n", + "1 NaN NaN 0 1 \n", + "2 NaN NaN 0 2 \n", + "3 NaN NaN 0 3 \n", + "4 NaN NaN 0 4 \n", + "5 NaN NaN 0 5 \n", + "6 NaN NaN 0 6 \n", + "7 NaN NaN 0 7 \n", + "8 NaN NaN 0 8 \n", + "9 NaN NaN 0 9 \n", + "10 NaN NaN 0 9 \n", + "\n", + " cluster_annotation_term_set_name color_hex_triplet first_child_label \\\n", + "0 neurotransmitter #2B93DF NaN \n", + "1 neurotransmitter #666666 NaN \n", + "2 neurotransmitter #FF3358 NaN \n", + "3 neurotransmitter #fcf04b NaN \n", + "4 neurotransmitter #0a9964 NaN \n", + "5 neurotransmitter #73E785 NaN \n", + "6 neurotransmitter #ff7621 NaN \n", + "7 neurotransmitter #820e57 NaN \n", + "8 neurotransmitter #533691 NaN \n", + "9 neurotransmitter #03EDFF NaN \n", + "10 neurotransmitter #ebebeb NaN \n", "\n", - " cluster_annotation_term_set_name color_hex_triplet \n", - "0 neurotransmitter #2B93DF \n", - "1 neurotransmitter #666666 \n", - "2 neurotransmitter #FF3358 \n", - "3 neurotransmitter #fcf04b \n", - "4 neurotransmitter #0a9964 " + " first_child_term_set_name \n", + "0 NaN \n", + "1 NaN \n", + "2 NaN \n", + "3 NaN \n", + "4 NaN \n", + "5 NaN \n", + "6 NaN \n", + "7 NaN \n", + "8 NaN \n", + "9 NaN \n", + "10 NaN " ] }, - "execution_count": 5, + "execution_count": 20, "metadata": {}, "output_type": "execute_result" } ], "source": [ - "term.head(5)" + "term[term['cluster_annotation_term_set_name'] == 'neurotransmitter']" ] }, { @@ -671,6 +798,13 @@ "id": "bb659473", "metadata": {}, "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "cluster_to_cluster_annotation_membership_pivoted.csv: 100%|█████████████████████| 531k/531k [00:00<00:00, 3.49MMB/s]\n" + ] + }, { "data": { "text/html": [ @@ -899,15 +1033,15 @@ "metadata": {}, "outputs": [], "source": [ - "def get_value( c, n, v ) :\n", + "def get_value(c, n, v) :\n", " return lookup[c].loc[n][v]\n", "\n", - "def format_cell (df,c,add_id=False,add_plus=False,add_minus=False) :\n", + "def format_cell(df, c, add_id=False, add_plus=False, add_minus=False) :\n", "\n", " divs = pd.DataFrame(index=df.index)\n", " \n", " pattern = '
'\n", - " divs['circle'] = [ pattern % get_value(c,x,'color_hex_triplet') for x in df[c] ]\n", + " divs['circle'] = [ pattern % get_value(c, x, 'color_hex_triplet') for x in df[c]]\n", " \n", " pattern = '
%s
'\n", " divs['name'] = [ pattern % x for x in df[c] ]\n", @@ -934,14 +1068,6 @@ " return output\n" ] }, - { - "cell_type": "markdown", - "id": "4d68d33a", - "metadata": {}, - "source": [ - "Helper function to create html document" - ] - }, { "cell_type": "code", "execution_count": 12, @@ -949,16 +1075,16 @@ "metadata": {}, "outputs": [], "source": [ - "def create_html (df,ts,file,title) :\n", + "def create_html(df, ts, file, title) :\n", " \n", " # apply formatter to each term set\n", " df_formatted = df.copy()\n", " \n", - " for tag in term_sets['name'] :\n", + " for tag in term_sets['name']:\n", " if tag in df_formatted.columns :\n", " \n", " add_id = False\n", - " if tag == ts :\n", + " if tag == ts:\n", " add_id = True\n", " \n", " add_plus = False\n", @@ -969,7 +1095,7 @@ " if tag != ts and tag not in ('neurotransmitter') :\n", " add_minus = True\n", " \n", - " df_formatted[tag] = format_cell(df,tag,add_id,add_plus,add_minus)\n", + " df_formatted[tag] = format_cell(df, tag, add_id, add_plus, add_minus)\n", " \n", " \n", " output = df_formatted.to_html(index=False, na_rep='',\n", @@ -991,6 +1117,14 @@ " f.write(html_string.format(table=output))" ] }, + { + "cell_type": "markdown", + "id": "4d68d33a", + "metadata": {}, + "source": [ + "Helper function to create html document" + ] + }, { "cell_type": "code", "execution_count": 13, @@ -1015,6 +1149,213 @@ "text": [ "34\n" ] + }, + { + "data": { + "text/html": [ + "
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1702 NP-CT-L6b Glut
281403 OB-CR Glut
137804 DG-IMN Glut
123805 OB-IMN GABA
63606 CTX-CGE GABA
70807 CTX-MGE GABA
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115809 CNU-LGE GABA
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146212 HY GABA
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207514 HY Glut
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276716 HY MM Glut
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483618 TH Glut
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331820 MB GABA
236821 MB Dopa
278122 MB-HB Sero
272123 P Glut
369124 MY Glut
496325 Pineal Glut
359326 P GABA
387727 MY GABA
398428 CB GABA
496429 CB Glut
508330 Astro-Epen
497531 OPC-Oligo
499632 OEC
500833 Vascular
502934 Immune
\n", + "
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classsubclass
12501 IT-ET Glut001 CLA-EPd-CTX Car3 Glut
11301 IT-ET Glut002 IT EP-CLA Glut
9401 IT-ET Glut003 L5/6 IT TPE-ENT Glut
9801 IT-ET Glut004 L6 IT CTX Glut
9501 IT-ET Glut005 L5 IT CTX Glut
.........
502934 Immune334 Microglia NN
501934 Immune335 BAM NN
502534 Immune336 Monocytes NN
502634 Immune337 DC NN
502434 Immune338 Lymphoid NN
\n", + "

338 rows × 2 columns

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" + ], + "text/plain": [ + " class subclass\n", + "125 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut\n", + "113 01 IT-ET Glut 002 IT EP-CLA Glut\n", + "94 01 IT-ET Glut 003 L5/6 IT TPE-ENT Glut\n", + "98 01 IT-ET Glut 004 L6 IT CTX Glut\n", + "95 01 IT-ET Glut 005 L5 IT CTX Glut\n", + "... ... ...\n", + "5029 34 Immune 334 Microglia NN\n", + "5019 34 Immune 335 BAM NN\n", + "5025 34 Immune 336 Monocytes NN\n", + "5026 34 Immune 337 DC NN\n", + "5024 34 Immune 338 Lymphoid NN\n", + "\n", + "[338 rows x 2 columns]" + ] + }, + "execution_count": 15, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "df_supertype = df_sorted[['class','subclass']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'subclass.html')\n", + "title = 'WMB-taxonmy: cell type subclasses'\n", + "create_html(df_supertype, 'subclass',file, title)\n", + "print(len(df_supertype))\n", + "df_supertype" + ] + }, + { + "cell_type": "code", + "execution_count": 16, + "id": "74417b86", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "1201\n" + ] + }, + { + "data": { + "text/html": [ + "
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classsubclasssupertype
12501 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_1
12801 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0002 CLA-EPd-CTX Car3 Glut_2
11301 IT-ET Glut002 IT EP-CLA Glut0003 IT EP-CLA Glut_1
11401 IT-ET Glut002 IT EP-CLA Glut0004 IT EP-CLA Glut_2
15401 IT-ET Glut002 IT EP-CLA Glut0005 IT EP-CLA Glut_3
............
502634 Immune337 DC NN1197 DC NN_1
502434 Immune338 Lymphoid NN1198 B cells NN_1
502134 Immune338 Lymphoid NN1199 ILC NN_2
502334 Immune338 Lymphoid NN1200 NK cells NN_3
502234 Immune338 Lymphoid NN1201 T cells NN_4
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1201 rows × 3 columns

\n", + "
" + ], + "text/plain": [ + " class subclass supertype\n", + "125 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0001 CLA-EPd-CTX Car3 Glut_1\n", + "128 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0002 CLA-EPd-CTX Car3 Glut_2\n", + "113 01 IT-ET Glut 002 IT EP-CLA Glut 0003 IT EP-CLA Glut_1\n", + "114 01 IT-ET Glut 002 IT EP-CLA Glut 0004 IT EP-CLA Glut_2\n", + "154 01 IT-ET Glut 002 IT EP-CLA Glut 0005 IT EP-CLA Glut_3\n", + "... ... ... ...\n", + "5026 34 Immune 337 DC NN 1197 DC NN_1\n", + "5024 34 Immune 338 Lymphoid NN 1198 B cells NN_1\n", + "5021 34 Immune 338 Lymphoid NN 1199 ILC NN_2\n", + "5023 34 Immune 338 Lymphoid NN 1200 NK cells NN_3\n", + "5022 34 Immune 338 Lymphoid NN 1201 T cells NN_4\n", + "\n", + "[1201 rows x 3 columns]" + ] + }, + "execution_count": 16, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "df_supertype = df_sorted[['class','subclass','supertype']].copy()\n", + "df_supertype.drop_duplicates(inplace=True)\n", + "\n", + "file = os.path.join(output_directory,'supertype.html')\n", + "title = 'WMB-taxonmy: cell type supertypes'\n", + "create_html(df_supertype, 'supertype',file, title)\n", + "print(len(df_supertype))\n", + "df_supertype" + ] + }, + { + "cell_type": "code", + "execution_count": 17, + "id": "5040f7f2", + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "5322\n" + ] + }, + { + "data": { + "text/html": [ + "
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classsubclasssupertypeclusterneurotransmitter
12501 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_10001 CLA-EPd-CTX Car3 Glut_1Glut
12601 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_10002 CLA-EPd-CTX Car3 Glut_1Glut
12701 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_10003 CLA-EPd-CTX Car3 Glut_1Glut
14001 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0001 CLA-EPd-CTX Car3 Glut_10004 CLA-EPd-CTX Car3 Glut_1Glut
12801 IT-ET Glut001 CLA-EPd-CTX Car3 Glut0002 CLA-EPd-CTX Car3 Glut_20005 CLA-EPd-CTX Car3 Glut_2Glut
..................
502834 Immune337 DC NN1197 DC NN_15318 DC NN_1Other
502434 Immune338 Lymphoid NN1198 B cells NN_15319 B cells NN_1Other
502134 Immune338 Lymphoid NN1199 ILC NN_25320 ILC NN_2Other
502334 Immune338 Lymphoid NN1200 NK cells NN_35321 NK cells NN_3Other
502234 Immune338 Lymphoid NN1201 T cells NN_45322 T cells NN_4Other
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5322 rows × 5 columns

\n", + "
" + ], + "text/plain": [ + " class subclass supertype \\\n", + "125 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0001 CLA-EPd-CTX Car3 Glut_1 \n", + "126 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0001 CLA-EPd-CTX Car3 Glut_1 \n", + "127 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0001 CLA-EPd-CTX Car3 Glut_1 \n", + "140 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0001 CLA-EPd-CTX Car3 Glut_1 \n", + "128 01 IT-ET Glut 001 CLA-EPd-CTX Car3 Glut 0002 CLA-EPd-CTX Car3 Glut_2 \n", + "... ... ... ... \n", + "5028 34 Immune 337 DC NN 1197 DC NN_1 \n", + "5024 34 Immune 338 Lymphoid NN 1198 B cells NN_1 \n", + "5021 34 Immune 338 Lymphoid NN 1199 ILC NN_2 \n", + "5023 34 Immune 338 Lymphoid NN 1200 NK cells NN_3 \n", + "5022 34 Immune 338 Lymphoid NN 1201 T cells NN_4 \n", + "\n", + " cluster neurotransmitter \n", + "125 0001 CLA-EPd-CTX Car3 Glut_1 Glut \n", + "126 0002 CLA-EPd-CTX Car3 Glut_1 Glut \n", + "127 0003 CLA-EPd-CTX Car3 Glut_1 Glut \n", + "140 0004 CLA-EPd-CTX Car3 Glut_1 Glut \n", + "128 0005 CLA-EPd-CTX Car3 Glut_2 Glut \n", + "... ... ... \n", + "5028 5318 DC NN_1 Other \n", + "5024 5319 B cells NN_1 Other \n", + "5021 5320 ILC NN_2 Other \n", + "5023 5321 NK cells NN_3 Other \n", + "5022 5322 T cells NN_4 Other \n", + "\n", + "[5322 rows x 5 columns]" + ] + }, + "execution_count": 17, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "if version == '20230630' :\n", + " df_supertype = df_sorted[['division','class','subclass','supertype','cluster','neurotransmitter']].copy()\n", + " df_supertype.drop_duplicates(inplace=True)\n", + "else :\n", + " df_supertype = df_sorted[['class','subclass','supertype','cluster','neurotransmitter']].copy()\n", + " df_supertype.drop_duplicates(inplace=True)\n", + "\n", "file = os.path.join(output_directory,'cluster.html')\n", "title = 'WMB-taxonmy: cell type clusters'\n", "create_html(df_supertype,'cluster',file, title)\n", - "print(len(df_sorted))" + "print(len(df_sorted))\n", + "df_supertype" ] }, { @@ -1117,7 +1844,8 @@ " file = os.path.join(output_directory,'division.html')\n", " title = 'WMB-taxonmy: cell type division'\n", " create_html(df_supertype, 'division', file, title)\n", - " print(len(df_supertype))" + " print(len(df_supertype))\n", + " df_supertype" ] }, { @@ -1132,6 +1860,93 @@ "text": [ "10\n" ] + }, + { + "data": { + "text/html": [ + "
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neurotransmitter
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1358Glut-GABA
559Chol
5035Hist
2863GABA-Glyc
2781Sero
3813Nora
\n", + "
" + ], + "text/plain": [ + " neurotransmitter\n", + "125 Glut\n", + "1351 Other\n", + "1238 GABA\n", + "1375 Dopa\n", + "1358 Glut-GABA\n", + "559 Chol\n", + "5035 Hist\n", + "2863 GABA-Glyc\n", + "2781 Sero\n", + "3813 Nora" + ] + }, + "execution_count": 19, + "metadata": {}, + "output_type": "execute_result" } ], "source": [ @@ -1141,7 +1956,8 @@ "file = os.path.join(output_directory,'neurotransmitter.html')\n", "title = 'WMB-taxonmy: neurotransmitter types'\n", "create_html(df_supertype, 'neurotransmitter', file, title)\n", - "print(len(df_supertype))" + "print(len(df_supertype))\n", + "df_supertype" ] }, { @@ -1169,7 +1985,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.0" + "version": "3.11.10" } }, "nbformat": 4, diff --git a/notebooks/Zeng_Aging_Mouse_clustering_analysis_and_annotation.ipynb b/notebooks/Zeng_Aging_Mouse_clustering_analysis_and_annotation.ipynb index bfca93f..2c72f9b 100644 --- a/notebooks/Zeng_Aging_Mouse_clustering_analysis_and_annotation.ipynb +++ b/notebooks/Zeng_Aging_Mouse_clustering_analysis_and_annotation.ipynb @@ -1729,7 +1729,7 @@ }, { "cell_type": "code", - "execution_count": 25, + "execution_count": 45, "metadata": {}, "outputs": [ { @@ -1865,8 +1865,105 @@ " supertype\n", " #994563\n", " \n", + " \n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " \n", + " \n", + " 843\n", + " CS20241021_0843\n", + " 842\n", + " 843_Microglia NN_1\n", + " #a88b30\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " \n", + " \n", + " 844\n", + " CS20241021_0844\n", + " 843\n", + " 844_Microglia NN_1\n", + " #df92c3\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " \n", + " \n", + " 845\n", + " CS20241021_0845\n", + " 844\n", + " 845_BAM NN_1\n", + " #a1adea\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " \n", + " \n", + " 846\n", + " CS20241021_0846\n", + " 845\n", + " 846_DC NN_1\n", + " #9a5824\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " \n", + " \n", + " 847\n", + " CS20241021_0847\n", + " 846\n", + " 847_T cells NN_4\n", + " #e7e085\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " \n", " \n", "\n", + "

2541 rows × 13 columns

\n", "" ], "text/plain": [ @@ -1877,6 +1974,12 @@ "3 CS20241021_0003 2 3_IT EP-CLA Glut_1 \n", "4 CS20241021_0004 3 4_IT EP-CLA Glut_1 \n", "5 CS20241021_0005 4 5_IT EP-CLA Glut_1 \n", + "... ... ... ... \n", + "843 CS20241021_0843 842 843_Microglia NN_1 \n", + "844 CS20241021_0844 843 844_Microglia NN_1 \n", + "845 CS20241021_0845 844 845_BAM NN_1 \n", + "846 CS20241021_0846 845 846_DC NN_1 \n", + "847 CS20241021_0847 846 847_T cells NN_4 \n", "\n", " cluster_color cluster_annotation_term_label \\\n", "cluster_alias \n", @@ -1885,6 +1988,12 @@ "3 #b96cf0 CS20230722_SUPT_0003 \n", "4 #bff691 CS20230722_SUPT_0003 \n", "5 #39fbfa CS20230722_SUPT_0003 \n", + "... ... ... \n", + "843 #a88b30 CS20230722_CLAS_34 \n", + "844 #df92c3 CS20230722_CLAS_34 \n", + "845 #a1adea CS20230722_CLAS_34 \n", + "846 #9a5824 CS20230722_CLAS_34 \n", + "847 #e7e085 CS20230722_CLAS_34 \n", "\n", " cluster_annotation_term_name cluster_annotation_term_set_label \\\n", "cluster_alias \n", @@ -1893,6 +2002,12 @@ "3 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", "4 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", "5 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", + "... ... ... \n", + "843 34 Immune CCN20230722_CLAS \n", + "844 34 Immune CCN20230722_CLAS \n", + "845 34 Immune CCN20230722_CLAS \n", + "846 34 Immune CCN20230722_CLAS \n", + "847 34 Immune CCN20230722_CLAS \n", "\n", " parent_term_label parent_term_set_label term_set_order \\\n", "cluster_alias \n", @@ -1901,6 +2016,12 @@ "3 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", "4 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", "5 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", + "... ... ... ... \n", + "843 NaN NaN 1 \n", + "844 NaN NaN 1 \n", + "845 NaN NaN 1 \n", + "846 NaN NaN 1 \n", + "847 NaN NaN 1 \n", "\n", " term_order cluster_annotation_term_set_name color_hex_triplet \n", "cluster_alias \n", @@ -1908,10 +2029,18 @@ "2 2 supertype #994563 \n", "3 2 supertype #994563 \n", "4 2 supertype #994563 \n", - "5 2 supertype #994563 " + "5 2 supertype #994563 \n", + "... ... ... ... \n", + "843 33 class #825f45 \n", + "844 33 class #825f45 \n", + "845 33 class #825f45 \n", + "846 33 class #825f45 \n", + "847 33 class #825f45 \n", + "\n", + "[2541 rows x 13 columns]" ] }, - "execution_count": 25, + "execution_count": 45, "metadata": {}, "output_type": "execute_result" } @@ -1925,7 +2054,7 @@ "# directory='WHB-taxonomy',\n", "# file_name='cluster_to_cluster_annotation_membership'\n", "# )\n", - "cluster_mapping.head()" + "cluster_mapping" ] }, { @@ -1937,7 +2066,7 @@ }, { "cell_type": "code", - "execution_count": 26, + "execution_count": 46, "metadata": {}, "outputs": [ { @@ -2185,8 +2314,201 @@ " Glut\n", " #2B93DF\n", " \n", + " \n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " ...\n", + " \n", + " \n", + " 843\n", + " CS20241021_0843\n", + " 842\n", + " 843_Microglia NN_1\n", + " #a88b30\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " 2640\n", + " CS20241021_0843\n", + " 842\n", + " 843_Microglia NN_1\n", + " #a88b30\n", + " 71\n", + " 2569\n", + " 0.026894\n", + " 0.973106\n", + " 20.304439\n", + " 4.343723\n", + " aging-enriched\n", + " #CD6828\n", + " No-NT\n", + " No-NT\n", + " #666666\n", + " \n", + " \n", + " 844\n", + " CS20241021_0844\n", + " 843\n", + " 844_Microglia NN_1\n", + " #df92c3\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " 771\n", + " CS20241021_0844\n", + " 843\n", + " 844_Microglia NN_1\n", + " #df92c3\n", + " 284\n", + " 487\n", + " 0.368353\n", + " 0.631647\n", + " 0.911851\n", + " -0.133131\n", + " unassigned\n", + " #DADEDF\n", + " No-NT\n", + " No-NT\n", + " #666666\n", + " \n", + " \n", + " 845\n", + " CS20241021_0845\n", + " 844\n", + " 845_BAM NN_1\n", + " #a1adea\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " 3030\n", + " CS20241021_0845\n", + " 844\n", + " 845_BAM NN_1\n", + " #a1adea\n", + " 1462\n", + " 1568\n", + " 0.482508\n", + " 0.517492\n", + " 0.556218\n", + " -0.846279\n", + " unassigned\n", + " #DADEDF\n", + " No-NT\n", + " No-NT\n", + " #666666\n", + " \n", + " \n", + " 846\n", + " CS20241021_0846\n", + " 845\n", + " 846_DC NN_1\n", + " #9a5824\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " 248\n", + " CS20241021_0846\n", + " 845\n", + " 846_DC NN_1\n", + " #9a5824\n", + " 98\n", + " 150\n", + " 0.395161\n", + " 0.604839\n", + " 0.814133\n", + " -0.296663\n", + " unassigned\n", + " #DADEDF\n", + " No-NT\n", + " No-NT\n", + " #666666\n", + " \n", + " \n", + " 847\n", + " CS20241021_0847\n", + " 846\n", + " 847_T cells NN_4\n", + " #e7e085\n", + " CS20230722_CLAS_34\n", + " 34 Immune\n", + " CCN20230722_CLAS\n", + " NaN\n", + " NaN\n", + " 1\n", + " 33\n", + " class\n", + " #825f45\n", + " 330\n", + " CS20241021_0847\n", + " 846\n", + " 847_T cells NN_4\n", + " #e7e085\n", + " 68\n", + " 262\n", + " 0.206061\n", + " 0.793939\n", + " 2.056692\n", + " 1.040326\n", + " unassigned\n", + " #DADEDF\n", + " No-NT\n", + " No-NT\n", + " #666666\n", + " \n", " \n", "\n", + "

2541 rows × 29 columns

\n", "" ], "text/plain": [ @@ -2197,6 +2519,12 @@ "3 CS20241021_0003 2 3_IT EP-CLA Glut_1 \n", "4 CS20241021_0004 3 4_IT EP-CLA Glut_1 \n", "5 CS20241021_0005 4 5_IT EP-CLA Glut_1 \n", + "... ... ... ... \n", + "843 CS20241021_0843 842 843_Microglia NN_1 \n", + "844 CS20241021_0844 843 844_Microglia NN_1 \n", + "845 CS20241021_0845 844 845_BAM NN_1 \n", + "846 CS20241021_0846 845 846_DC NN_1 \n", + "847 CS20241021_0847 846 847_T cells NN_4 \n", "\n", " cluster_color cluster_annotation_term_label \\\n", "cluster_alias \n", @@ -2205,6 +2533,12 @@ "3 #b96cf0 CS20230722_SUPT_0003 \n", "4 #bff691 CS20230722_SUPT_0003 \n", "5 #39fbfa CS20230722_SUPT_0003 \n", + "... ... ... \n", + "843 #a88b30 CS20230722_CLAS_34 \n", + "844 #df92c3 CS20230722_CLAS_34 \n", + "845 #a1adea CS20230722_CLAS_34 \n", + "846 #9a5824 CS20230722_CLAS_34 \n", + "847 #e7e085 CS20230722_CLAS_34 \n", "\n", " cluster_annotation_term_name cluster_annotation_term_set_label \\\n", "cluster_alias \n", @@ -2213,6 +2547,12 @@ "3 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", "4 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", "5 0003 IT EP-CLA Glut_1 CCN20230722_SUPT \n", + "... ... ... \n", + "843 34 Immune CCN20230722_CLAS \n", + "844 34 Immune CCN20230722_CLAS \n", + "845 34 Immune CCN20230722_CLAS \n", + "846 34 Immune CCN20230722_CLAS \n", + "847 34 Immune CCN20230722_CLAS \n", "\n", " parent_term_label parent_term_set_label term_set_order \\\n", "cluster_alias \n", @@ -2221,6 +2561,12 @@ "3 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", "4 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", "5 CS20230722_SUBC_002 CCN20230722_SUBC 3 \n", + "... ... ... ... \n", + "843 NaN NaN 1 \n", + "844 NaN NaN 1 \n", + "845 NaN NaN 1 \n", + "846 NaN NaN 1 \n", + "847 NaN NaN 1 \n", "\n", " term_order cluster_annotation_term_set_name color_hex_triplet \\\n", "cluster_alias \n", @@ -2229,6 +2575,12 @@ "3 2 supertype #994563 \n", "4 2 supertype #994563 \n", "5 2 supertype #994563 \n", + "... ... ... ... \n", + "843 33 class #825f45 \n", + "844 33 class #825f45 \n", + "845 33 class #825f45 \n", + "846 33 class #825f45 \n", + "847 33 class #825f45 \n", "\n", " number_of_cells cluster_label_cl_info cluster_order_cl_info \\\n", "cluster_alias \n", @@ -2237,6 +2589,12 @@ "3 589 CS20241021_0003 2 \n", "4 207 CS20241021_0004 3 \n", "5 2141 CS20241021_0005 4 \n", + "... ... ... ... \n", + "843 2640 CS20241021_0843 842 \n", + "844 771 CS20241021_0844 843 \n", + "845 3030 CS20241021_0845 844 \n", + "846 248 CS20241021_0846 845 \n", + "847 330 CS20241021_0847 846 \n", "\n", " cluster_name_cl_info cluster_color_cl_info \\\n", "cluster_alias \n", @@ -2245,6 +2603,12 @@ "3 3_IT EP-CLA Glut_1 #b96cf0 \n", "4 4_IT EP-CLA Glut_1 #bff691 \n", "5 5_IT EP-CLA Glut_1 #39fbfa \n", + "... ... ... \n", + "843 843_Microglia NN_1 #a88b30 \n", + "844 844_Microglia NN_1 #df92c3 \n", + "845 845_BAM NN_1 #a1adea \n", + "846 846_DC NN_1 #9a5824 \n", + "847 847_T cells NN_4 #e7e085 \n", "\n", " number_of_adult_cells number_of_aged_cells \\\n", "cluster_alias \n", @@ -2253,6 +2617,12 @@ "3 240 349 \n", "4 107 100 \n", "5 655 1486 \n", + "... ... ... \n", + "843 71 2569 \n", + "844 284 487 \n", + "845 1462 1568 \n", + "846 98 150 \n", + "847 68 262 \n", "\n", " proportion_adult_cells proportion_aged_cells odds_ratio \\\n", "cluster_alias \n", @@ -2261,6 +2631,12 @@ "3 0.407470 0.592530 0.576896 \n", "4 0.516908 0.483092 0.371035 \n", "5 0.305932 0.694068 0.900735 \n", + "... ... ... ... \n", + "843 0.026894 0.973106 20.304439 \n", + "844 0.368353 0.631647 0.911851 \n", + "845 0.482508 0.517492 0.556218 \n", + "846 0.395161 0.604839 0.814133 \n", + "847 0.206061 0.793939 2.056692 \n", "\n", " log2_odds_ratio cluster_age_bias cluster_age_bias_color \\\n", "cluster_alias \n", @@ -2269,6 +2645,12 @@ "3 -0.793616 unassigned #DADEDF \n", "4 -1.430373 unassigned #DADEDF \n", "5 -0.150825 unassigned #DADEDF \n", + "... ... ... ... \n", + "843 4.343723 aging-enriched #CD6828 \n", + "844 -0.133131 unassigned #DADEDF \n", + "845 -0.846279 unassigned #DADEDF \n", + "846 -0.296663 unassigned #DADEDF \n", + "847 1.040326 unassigned #DADEDF \n", "\n", " neurotransmitter_combined_label neurotransmitter_label \\\n", "cluster_alias \n", @@ -2277,6 +2659,12 @@ "3 Glut Glut \n", "4 Glut Glut \n", "5 Glut Glut \n", + "... ... ... \n", + "843 No-NT No-NT \n", + "844 No-NT No-NT \n", + "845 No-NT No-NT \n", + "846 No-NT No-NT \n", + "847 No-NT No-NT \n", "\n", " neurotransmitter_color \n", "cluster_alias \n", @@ -2284,17 +2672,25 @@ "2 #2B93DF \n", "3 #2B93DF \n", "4 #2B93DF \n", - "5 #2B93DF " + "5 #2B93DF \n", + "... ... \n", + "843 #666666 \n", + "844 #666666 \n", + "845 #666666 \n", + "846 #666666 \n", + "847 #666666 \n", + "\n", + "[2541 rows x 29 columns]" ] }, - "execution_count": 26, + "execution_count": 46, "metadata": {}, "output_type": "execute_result" } ], "source": [ "membership = cluster_mapping.join(cluster_info, rsuffix='_cl_info')\n", - "membership.head()" + "membership" ] }, {