update params for "04_annotation_Across_Samples_exploration.Rmd" mapp…

…ing --> predicted
AlexsLemonade · Oct 28, 2024 · 2cbb62b · 2cbb62b
1 parent e98126d
commit 2cbb62b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/analyses/cell-type-wilms-tumor-06/00_run_workflow.R b/analyses/cell-type-wilms-tumor-06/00_run_workflow.R
@@ -97,7 +97,7 @@ if (!running_ci) {
   for(thr in c(0.5, 0.75, 0.85, 0.95)){
   # Run notebook template to explore label transfer and clustering for all samples at once
   rmarkdown::render(input = file.path(notebook_output_dir, "04_annotation_Across_Samples_exploration.Rmd"),
-                    params = list(mapping_score_thr = thr),
+                    params = list(predicted.score_thr = thr),
                     output_format = "html_document",
                     output_file = glue::glue("04_annotation_Across_Samples_exploration_predicted.score_threshold_",thr,".html"),
                     output_dir = notebook_output_dir)