AMICI v0.11.13
Breaking changes:
- AMICI requires Python>=3.7
- Updated package installation (PEP517/518):
Creating source distributions requires https://github.com/pypa/build (#1384)
(but now handles all package building dependencies properly)
Features:
- More flexible state reinitialization (#1417)
Updated dependencies:
- Upgrade to sundials 5.7.0 (#1392)
Fixes:
- Python: account for heaviside functions in expressions (#1382)
- Python: allow loading of existing models in import_petab_problem (#1383)
- Python: Don't override user-provided compiler/linker flags (#1389)
- Python: PEtab import reinitialization fixes (#1417)
- Python: Fix PEtab observables for pysb models (#1390)
- Python: Substitute expressions in event condition expressions (#1404)
- Python: Unspecified initial states in PEtab conditions table default to SBML initial value (#1397)
- C++: Fix timepoint out of bounds access (#1402)
- C++: Fix exported CMake config (#1388)
- Fixed Dockerfile: add python3-venv (#1398, #1408)
Other: