diff --git a/.github/workflows/main-publish.yml b/.github/workflows/main-publish.yml index 92e8fe972..7d4e8a747 100644 --- a/.github/workflows/main-publish.yml +++ b/.github/workflows/main-publish.yml @@ -26,7 +26,7 @@ jobs: - uses: actions/checkout@v2 - uses: actions/setup-python@v2 with: - python-version: 3.8 + python-version: 3.9 - name: Install Python dependencies for publish run: python -m pip install dcicutils==7.5.0 - name: Publish diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index e55c0ded1..b305e7730 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -25,7 +25,7 @@ jobs: # Build matrix strategy: matrix: - python_version: [3.8, 3.11] + python_version: [3.9, 3.11, 3.12] test_type: ['UNIT', 'INDEXING'] # Steps represent a sequence of tasks that will be executed as part of the job diff --git a/.github/workflows/static-checks.yml b/.github/workflows/static-checks.yml index c378043a1..e11b7f098 100644 --- a/.github/workflows/static-checks.yml +++ b/.github/workflows/static-checks.yml @@ -27,7 +27,7 @@ jobs: - uses: actions/checkout@v2 - uses: actions/setup-python@v2 with: - python-version: 3.8 + python-version: 3.9 - name: Python Package Setup run: | make build-for-ga diff --git a/CHANGELOG.rst b/CHANGELOG.rst index 386ef54d8..d71cd8953 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -6,6 +6,23 @@ snovault Change Log ---------- +11.18.0 +======= + +* Dropped support for Python 3.8. +* Updates related to Python 3.12. + - Had to update venusian (from 1.2.0) to 3.1.0. + - Had to update pyramid (from 1.10.4) to 1.10.8 (for imp import not found). + - Had to add pmdarima (no module pyramid.compat). + - Had to define/update numpy (to 1.26.4) for this as it was implicitly, + due to something else, using 1.24.4 which failed to build with Python 3.12. + - And had to update lower bound of Python (from 3.8.1) to 3.9 for this. + - Had to update dcicutils (from 8.11.0) to 8.13.0 (for pyramid update for imp import not found). +* Minor change to dev_servers.py to facilitate running a local ElasticSearch proxy + to observe traffic (resquests/responses) between the portal and ElasticSearch + with a tool like mitmproxy or mitmweb; see comments in dev_server.py. + + 11.17.0 ======= diff --git a/poetry.lock b/poetry.lock index 79b3a91f7..d13b75f29 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,10 +1,9 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. [[package]] name = "appdirs" version = "1.4.4" description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "main" optional = false python-versions = "*" files = [ @@ -16,7 +15,6 @@ files = [ name = "arrow" version = "1.3.0" description = "Better dates & times for Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -30,13 +28,12 @@ types-python-dateutil = ">=2.8.10" [package.extras] doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"] -test = ["dateparser (>=1.0.0,<2.0.0)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (>=3.0.0,<4.0.0)"] +test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"] [[package]] name = "async-timeout" version = "4.0.3" description = "Timeout context manager for asyncio programs" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -48,7 +45,6 @@ files = [ name = "attrs" version = "23.2.0" description = "Classes Without Boilerplate" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -68,7 +64,6 @@ tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "p name = "aws-requests-auth" version = "0.4.3" description = "AWS signature version 4 signing process for the python requests module" -category = "main" optional = false python-versions = "*" files = [ @@ -83,7 +78,6 @@ requests = ">=0.14.0" name = "beautifulsoup4" version = "4.12.3" description = "Screen-scraping library" -category = "main" optional = false python-versions = ">=3.6.0" files = [ @@ -103,18 +97,17 @@ lxml = ["lxml"] [[package]] name = "boto3" -version = "1.34.124" +version = "1.34.136" description = "The AWS SDK for Python" -category = "main" optional = false python-versions = ">=3.8" files = [ - {file = "boto3-1.34.124-py3-none-any.whl", hash = "sha256:549d9735bbb7cf8e1a2f4b3b676be32946717c59f33c47234586835dc904d04e"}, - {file = "boto3-1.34.124.tar.gz", hash = "sha256:a91ee58fa54b170f17b2e144f038e155f92cf515f1c073ac2595e9ee45f125a8"}, + {file = "boto3-1.34.136-py3-none-any.whl", hash = "sha256:d41037e2c680ab8d6c61a0a4ee6bf1fdd9e857f43996672830a95d62d6f6fa79"}, + {file = "boto3-1.34.136.tar.gz", hash = "sha256:0314e6598f59ee0f34eb4e6d1a0f69fa65c146d2b88a6e837a527a9956ec2731"}, ] [package.dependencies] -botocore = ">=1.34.124,<1.35.0" +botocore = ">=1.34.136,<1.35.0" jmespath = ">=0.7.1,<2.0.0" s3transfer = ">=0.10.0,<0.11.0" @@ -123,14 +116,13 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"] [[package]] name = "boto3-stubs" -version = "1.34.124" -description = "Type annotations for boto3 1.34.124 generated with mypy-boto3-builder 7.24.0" -category = "dev" +version = "1.34.136" +description = "Type annotations for boto3 1.34.136 generated with mypy-boto3-builder 7.24.0" optional = false python-versions = ">=3.8" files = [ - {file = "boto3_stubs-1.34.124-py3-none-any.whl", hash = "sha256:6dbb4a3b86e62ae018a72e1600454d9448534e61990fef357dbac4d9d368fb0a"}, - {file = "boto3_stubs-1.34.124.tar.gz", hash = "sha256:5fed3dd80b44e88fe4e8c2f216205518944636dcbcbd2806d04e0d19537af16b"}, + {file = "boto3_stubs-1.34.136-py3-none-any.whl", hash = "sha256:5826c22c10fc9032376bbee436d1b23b111e5fb1f13c75ecde8727151191f057"}, + {file = "boto3_stubs-1.34.136.tar.gz", hash = "sha256:ecbce782ae19037d1f26673cfc30358493c9658ea0af06dd58a999be963ab275"}, ] [package.dependencies] @@ -143,7 +135,7 @@ accessanalyzer = ["mypy-boto3-accessanalyzer (>=1.34.0,<1.35.0)"] account = ["mypy-boto3-account (>=1.34.0,<1.35.0)"] acm = ["mypy-boto3-acm (>=1.34.0,<1.35.0)"] acm-pca = ["mypy-boto3-acm-pca (>=1.34.0,<1.35.0)"] -all = ["mypy-boto3-accessanalyzer (>=1.34.0,<1.35.0)", "mypy-boto3-account (>=1.34.0,<1.35.0)", "mypy-boto3-acm (>=1.34.0,<1.35.0)", "mypy-boto3-acm-pca (>=1.34.0,<1.35.0)", "mypy-boto3-amp (>=1.34.0,<1.35.0)", "mypy-boto3-amplify 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Meter" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3119,7 +3379,6 @@ telegram = ["requests"] name = "transaction" version = "3.1.0" description = "Transaction management for Python" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*" files = [ @@ -3139,7 +3398,6 @@ testing = ["coverage", "mock", "nose"] name = "translationstring" version = "1.4" description = "Utility library for i18n relied on by various Repoze and Pyramid packages" -category = "main" optional = false python-versions = "*" files = [ @@ -3152,21 +3410,19 @@ docs = ["Sphinx (>=1.3.1)", "docutils", "pylons-sphinx-themes"] [[package]] name = "types-awscrt" -version = "0.20.11" +version = "0.20.12" description = "Type annotations and code completion for awscrt" -category = "dev" optional = false python-versions = "<4.0,>=3.7" files = [ - {file = "types_awscrt-0.20.11-py3-none-any.whl", hash = "sha256:3236ba5097176080189135345acfcfeae18bac88869043daf55883649ce6e2ff"}, - {file = "types_awscrt-0.20.11.tar.gz", hash = "sha256:ad5ce9fb511414430326f19a513e23d3bc7143c10cdbe1cdaeb2222ad567698f"}, + {file = "types_awscrt-0.20.12-py3-none-any.whl", hash = "sha256:521ce54cc4dad9fe6480556bb0f8315a508106938ba1f2a0baccfcea7d4a4dee"}, + {file = "types_awscrt-0.20.12.tar.gz", hash = "sha256:0beabdde0205dc1da679ea464fd3f98b570ef4f0fc825b155a974fb51b21e8d9"}, ] [[package]] name = "types-python-dateutil" version = "2.9.0.20240316" description = "Typing stubs for python-dateutil" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3178,7 +3434,6 @@ files = [ name = "types-s3transfer" version = "0.10.1" description = "Type annotations and code completion for s3transfer" -category = "dev" optional = false python-versions = "<4.0,>=3.8" files = [ @@ -3190,7 +3445,6 @@ files = [ name = "typing-extensions" version = "4.12.2" description = "Backported and Experimental Type Hints for Python 3.8+" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3198,11 +3452,21 @@ files = [ {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, ] +[[package]] +name = "tzdata" +version = "2024.1" +description = "Provider of IANA time zone data" +optional = false +python-versions = ">=2" +files = [ + {file = "tzdata-2024.1-py2.py3-none-any.whl", hash = "sha256:9068bc196136463f5245e51efda838afa15aaeca9903f49050dfa2679db4d252"}, + {file = "tzdata-2024.1.tar.gz", hash = "sha256:2674120f8d891909751c38abcdfd386ac0a5a1127954fbc332af6b5ceae07efd"}, +] + [[package]] name = "uri-template" version = "1.3.0" description = "RFC 6570 URI Template Processor" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -3215,14 +3479,13 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake [[package]] name = "urllib3" -version = "1.26.18" +version = "1.26.19" description = "HTTP library with thread-safe connection pooling, file post, and more." -category = "main" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" files = [ - {file = "urllib3-1.26.18-py2.py3-none-any.whl", hash = "sha256:34b97092d7e0a3a8cf7cd10e386f401b3737364026c45e622aa02903dffe0f07"}, - {file = "urllib3-1.26.18.tar.gz", hash = "sha256:f8ecc1bba5667413457c529ab955bf8c67b45db799d159066261719e328580a0"}, + {file = "urllib3-1.26.19-py2.py3-none-any.whl", hash = "sha256:37a0344459b199fce0e80b0d3569837ec6b6937435c5244e7fd73fa6006830f3"}, + {file = "urllib3-1.26.19.tar.gz", hash = "sha256:3e3d753a8618b86d7de333b4223005f68720bcd6a7d2bcb9fbd2229ec7c1e429"}, ] [package.extras] @@ -3232,25 +3495,23 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"] [[package]] name = "venusian" -version = "1.2.0" +version = "3.1.0" description = "A library for deferring decorator actions" -category = "main" optional = false -python-versions = "*" +python-versions = ">=3.7" files = [ - {file = "venusian-1.2.0-py2.py3-none-any.whl", hash = "sha256:2f2d077a1eedc3fda40425f65687c8c494da7e83d7c23bc2c4d1a40eb3ca5b6d"}, - {file = "venusian-1.2.0.tar.gz", hash = "sha256:64ec8285b80b110d0ae5db4280e90e31848a59db98db1aba4d7d46f48ce91e3e"}, + {file = "venusian-3.1.0-py3-none-any.whl", hash = "sha256:d1fb1e49927f42573f6c9b7c4fcf61c892af8fdcaa2314daa01d9a560b23488d"}, + {file = "venusian-3.1.0.tar.gz", hash = "sha256:eb72cdca6f3139a15dc80f9c95d3c10f8a54a0ba881eeef8e2ec5b42d3ee3a95"}, ] [package.extras] -docs = ["Sphinx", "repoze.sphinx.autointerface"] +docs = ["Sphinx (>=4.3.2)", "pylons-sphinx-themes", "repoze.sphinx.autointerface", "sphinx-copybutton"] testing = ["coverage", "pytest", "pytest-cov"] [[package]] name = "waitress" version = "3.0.0" description = "Waitress WSGI server" -category = "main" optional = false python-versions = ">=3.8.0" files = [ @@ -3266,7 +3527,6 @@ testing = ["coverage (>=5.0)", "pytest", "pytest-cov"] name = "webcolors" version = "24.6.0" description = "A library for working with the color formats defined by HTML and CSS." -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3282,7 +3542,6 @@ tests = ["coverage[toml]"] name = "webencodings" version = "0.5.1" description = "Character encoding aliases for legacy web content" -category = "main" optional = false python-versions = "*" files = [ @@ -3294,7 +3553,6 @@ files = [ name = "webob" version = "1.8.7" description = "WSGI request and response object" -category = "main" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*" files = [ @@ -3310,7 +3568,6 @@ testing = ["coverage", "pytest (>=3.1.0)", "pytest-cov", "pytest-xdist"] name = "websocket-client" version = "1.8.0" description = "WebSocket client for Python with low level API options" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -3327,7 +3584,6 @@ test = ["websockets"] name = "webtest" version = "2.0.35" description = "Helper to test WSGI applications" -category = "main" optional = false python-versions = "*" files = [ @@ -3349,7 +3605,6 @@ tests = ["PasteDeploy", "WSGIProxy2", "coverage", "mock", "nose (<1.3.0)", "pyqu name = "werkzeug" version = "3.0.3" description = "The comprehensive WSGI web application library." -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -3367,7 +3622,6 @@ watchdog = ["watchdog (>=2.3)"] name = "wheel" version = "0.43.0" description = "A built-package format for Python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -3382,7 +3636,6 @@ test = ["pytest (>=6.0.0)", "setuptools (>=65)"] name = "wsgiproxy2" version = "0.4.2" description = "UNKNOWN" -category = "main" optional = false python-versions = "*" files = [ @@ -3397,7 +3650,6 @@ webob = "*" name = "xlrd" version = "1.2.0" description = "Library for developers to extract data from Microsoft Excel (tm) spreadsheet files" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -3409,7 +3661,6 @@ files = [ name = "xmltodict" version = "0.13.0" description = "Makes working with XML feel like you are working with JSON" -category = "dev" optional = false python-versions = ">=3.4" files = [ @@ -3417,27 +3668,10 @@ files = [ {file = "xmltodict-0.13.0.tar.gz", hash = "sha256:341595a488e3e01a85a9d8911d8912fd922ede5fecc4dce437eb4b6c8d037e56"}, ] -[[package]] -name = "zipp" -version = "3.19.2" -description = "Backport of pathlib-compatible object wrapper for zip files" -category = "main" -optional = false -python-versions = ">=3.8" -files = [ - {file = "zipp-3.19.2-py3-none-any.whl", hash = "sha256:f091755f667055f2d02b32c53771a7a6c8b47e1fdbc4b72a8b9072b3eef8015c"}, - {file = "zipp-3.19.2.tar.gz", hash = "sha256:bf1dcf6450f873a13e952a29504887c89e6de7506209e5b1bcc3460135d4de19"}, -] - -[package.extras] -doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] -test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] - [[package]] name = "zope-deprecation" version = "4.4.0" description = "Zope Deprecation Infrastructure" -category = "main" optional = false python-versions = "*" files = [ @@ -3456,7 +3690,6 @@ test = ["zope.testrunner"] name = "zope-interface" version = "5.5.2" description = "Interfaces for Python" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -3510,7 +3743,6 @@ testing = ["coverage (>=5.0.3)", "zope.event", "zope.testing"] name = "zope-sqlalchemy" version = "1.6" description = "Minimal Zope/SQLAlchemy transaction integration" -category = "main" optional = false python-versions = "*" files = [ @@ -3529,5 +3761,5 @@ test = ["zope.testing"] [metadata] lock-version = "2.0" -python-versions = ">=3.8.1,<3.12" -content-hash = "12a04983f21a72957b4cb6a392f456a08e1708f0f96bd584464b2fc67140ef32" +python-versions = ">=3.9,<3.13" +content-hash = "04e072ff83764d3b1b7ba3e3dee812c84b3fd005e1de6ffba83cefa0c8de8d90" diff --git a/pyproject.toml b/pyproject.toml index 9e0a1dc61..1efa2795a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "dcicsnovault" -version = "11.17.0" +version = "11.18.0" description = "Storage support for 4DN Data Portals." authors = ["4DN-DCIC Team "] license = "MIT" @@ -34,27 +34,34 @@ classifiers = [ 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', + 'Programming Language :: Python :: 3.12' ] [tool.poetry.dependencies] -python = ">=3.8.1,<3.12" +python = ">=3.9,<3.13" aws_requests_auth = "^0.4.1" -boto3 = ">=1.28.62" # no particular version required, but this speeds up search -botocore = ">=1.31.62" # no particular version required, but this speeds up search +boto3 = "^1.34.136" +botocore = "^1.34.136" elasticsearch = "7.13.4" # versions >= 7.14.0 lock out AWS ES elasticsearch_dsl = "^7.4.0" -dcicutils = "^8.11.0" -future = ">=0.15.2,<1" +#python-3.12 elasticsearch = "^7.17.9" +#python-3.12 elasticsearch_dsl = "^7.4.1" +dcicutils = "^8.13.0" +future = "^0.18.3" html5lib = ">=1.1" # experimental, should be OK now that we're not using moto server humanfriendly = "^1.44.9" netaddr = ">=0.8.0,<1" +numpy = "^1.26.4" passlib = "^1.7.4" pillow = "^9.5.0" +pmdarima = "^2.0.4" psutil = "^5.9.0" psycopg2-binary = "^2.9.1" PyBrowserID = ">=0.10.0,<1" pyjwt = "^2.6.0" -pyramid = "1.10.4" +#pyramid = "^2.0.2" +#pyramid = "1.10.4" +pyramid = "1.10.8" pyramid-multiauth = ">=0.9.0,<1" pyramid-retry = "^1.0" pyramid-tm = "^2.5" @@ -75,7 +82,7 @@ subprocess_middleware = ">=0.3,<1" # TODO: Investigate whether a major version upgrade is allowable for 'transaction'. transaction = "^3.0.1" # TODO: Investigate whether a major version upgrade is allowable for 'venusian'. -venusian = "^1.2.0" +venusian = "^3.1.0" WebOb = "^1.8.7" WebTest = "^2.0.35" WSGIProxy2 = "0.4.2" @@ -86,8 +93,8 @@ xlrd = "^1.0.0" jsonschema = {extras = ["format-nongpl"], version = "^4.19.0"} [tool.poetry.dev-dependencies] -boto3-stubs = ">=1.28.62" # no particular version required, but this speeds up search -botocore-stubs = ">=1.31.62" # no particular version required, but this speeds up search +boto3-stubs = "^1.34.136" +botocore-stubs = "^1.34.136" coverage = ">=6.2" codacy-coverage = ">=1.3.11" # When we add coverage, this must be loaded manually in GA workflow for coverage because a dependency on 2to3 diff --git a/snovault/dev_servers.py b/snovault/dev_servers.py index c63dbc5fe..53d738322 100644 --- a/snovault/dev_servers.py +++ b/snovault/dev_servers.py @@ -160,8 +160,20 @@ def cleanup_process(): es_server_url = config.get('elasticsearch.server', "localhost") if '127.0.0.1' in es_server_url or 'localhost' in es_server_url: - # Bootup local ES server subprocess. Else assume connecting to remote ES cluster. - elasticsearch = elasticsearch_fixture.server_process(esdata, echo=True) + # Bootup local ES server subprocess; otherwise assume we are connecting to a remote ES cluster. + # The elasticsearch.server.actual_port property is useful (only) for running a localhost ElasticSearch + # proxy in order to observe traffic (requests/responses) between portal and ElasticSearch with a tool like + # mitmweb; e.g. setting elasticsearch.server.actual_port to 9201 and elasticsearch.server to localhost:9200 + # will cause ElasticSearch to actually run on port 9201 but will cause portal to talk to it via port 9200, + # and then we can run mitmweb --mode reverse:http://localhost:9201 -p 9200 --web-port 8081 which will + # allow us to browse to http://localhost:8081 locally to observe all of the ElasticSearch traffic. + if (es_port := config.get('elasticsearch.server.actual_port', None)) and es_port.isdigit(): + es_port = int(es_port) + elif ((colon := es_server_url.rfind(":")) > 0) and (es_port := es_server_url[colon + 1:]).isdigit(): + es_port = int(es_port) + else: + es_port = None + elasticsearch = elasticsearch_fixture.server_process(esdata, port=es_port, echo=True) processes.append(elasticsearch) elif not config.get('indexer.namespace'): raise Exception( diff --git a/snovault/embed.py b/snovault/embed.py index 20d0c8ce5..fb6d3e590 100644 --- a/snovault/embed.py +++ b/snovault/embed.py @@ -1,14 +1,14 @@ import logging from copy import deepcopy from posixpath import join -from pyramid.compat import ( - native_, - unquote_bytes_to_wsgi, -) from pyramid.httpexceptions import HTTPNotFound, HTTPServerError import pyramid.request from .crud_views import collection_add as sno_collection_add from .interfaces import COLLECTIONS, CONNECTION +from .pyramid_compat import ( + native_, + unquote_bytes_to_wsgi, +) from .resources import Collection from .schema_utils import validate_request from dcicutils.misc_utils import check_true diff --git a/snovault/local_roles.py b/snovault/local_roles.py index d117a6859..7128e05c5 100644 --- a/snovault/local_roles.py +++ b/snovault/local_roles.py @@ -1,6 +1,6 @@ from dcicutils.misc_utils import environ_bool, PRINT from pyramid.authorization import ACLAuthorizationPolicy -from pyramid.compat import is_nonstr_iter +from pyramid.util import is_nonstr_iter from pyramid.interfaces import IAuthorizationPolicy from pyramid.location import lineage from zope.interface import implementer diff --git a/snovault/pyramid_compat.py b/snovault/pyramid_compat.py new file mode 100644 index 000000000..7c18c7452 --- /dev/null +++ b/snovault/pyramid_compat.py @@ -0,0 +1,24 @@ +# Note that pyramid.compat disappeared with pyramid 2.0.2, during move to Python 3.12, +# though went back to pyramid 1.10.8 subsequently, will run into this eventually. + +from urllib.parse import unquote_to_bytes + +text_type = str + + +def ascii_native_(s): + if isinstance(s, text_type): + s = s.encode('ascii') + return str(s, 'ascii', 'strict') + + +def native_(s, encoding='latin-1', errors='strict'): + """ If ``s`` is an instance of ``text_type``, return + ``s``, otherwise return ``str(s, encoding, errors)``""" + if isinstance(s, text_type): + return s + return str(s, encoding, errors) + + +def unquote_bytes_to_wsgi(bytestring): + return unquote_to_bytes(bytestring).decode('latin-1') diff --git a/snovault/tests/test_views.py b/snovault/tests/test_views.py index 588f05c61..6e7fccc06 100644 --- a/snovault/tests/test_views.py +++ b/snovault/tests/test_views.py @@ -4,10 +4,10 @@ from base64 import b64encode from jsonschema import Draft202012Validator -from pyramid.compat import ascii_native_ from uuid import uuid4 from ..interfaces import TYPES +from ..pyramid_compat import ascii_native_ from ..util import mappings_use_nested from .testing_views import (